CmoCh02G003180 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAATTCCCCGGCTAGCTATCGTTCTCTCCGTCCTCTTCCTCGTCTCCATATCGGCCCGTTCCGAGTACTACTCCAGAACTTCCCGGCGTGTTCATCTAAAACCCAAGGTAACCCATCTCCGTTTCTTCCTTTTCGACATCCTAAGCGGCGATAAACCCACCGCTGTCAAAGTTGCGCATTCGAACGTCACCTTTGGCACGTCTGTGATCCCATTCGGCACCGTCTACGCCATCGACGACCCGCTTCGAGAGGGACCCGAATATAATTCGACATTGATCGGCAATGCCAGGGGGATGTATATGTCAGCAAGTAGAGGCTCAGATTTTTGCTTGGTGATGTACATTGACTACGCTTTCACTGCCGGCAAGTTCAAGGGCAGCTCCATCAGTGTGTTTTCGAGGAACCCGGTGACGGAGACGAAACGGGAGGTGGCGGTTGTCGGCGGGCGAGGGAAGTTTAGGATGGCTCGAGGGTTTGCTAAGCTTAAGACACATTATTTGAATGTCAACAATGGTGATGCCATTATTGAATATGATGTTACTGTGTTTCATTATTGAGAGATTAGGAGAAGATGATAGCCGTTGGATTTTGAATTGTGACATCGAATCATTTGGTCTTAAGGATTGATTAATTACCTAATTATCCTTTTGCTAAATTAATAAAAATCTCTCTTTTTTTCTTTATAATTTATAATTTATACCTCTAAAATTAATTATCCGGGTATTTTTTAATTTTTTTTTAAATATAAAGGTATTTTTTGTAATAATTATTGATATAAAAAATATTATTATAATTAACGGTGAAACAAAACAATTATGATTACATTAGAGGTCGAATAAAAAAAATTATAAGAATCTAACTGAAAACGACTATCTTTACTCATATAAGAATCTAAGGAAAATAAAAAACAAAACCGTAAGAGTATTTAAAATGTTTTCTTTACTCATATACGTTATCTGTCTTACAGTCATGTTTGTCCAAAGCGTGTTGTCAATAACCATTGAAGAGGTATTATAGGGGATGTATTATAAGGGGATGCGACTAGTTTGAAGTTTAAGGGTATGTCTTAGAATGTACTACAAGGGGATGTGACTAGTCGTTAATTCTTCCTACCTTGAGTTGTATGTTATTCAAGTCGTGGTGTTTCTTTCTTTACTTATAGTTATATAAAACGTTGCTTCCAATTCTTTCAAACTCTCTTTACCCGTTTTATAAAACTTTTCTAAAAGCATGGTTAGAGGTTTGGGTATACGTCATCAAGTCAAGAGCAACACGATTTCGAGTTGGTTGACTCACTCGGTGGTTAGGGTGAGTATCACACAATCACTTACAAATGATTGCACGTGTTAGGCTAATTAAGGATGTTCTGCTATACTGTTAGTTTAAACAGGATTTGAACGTTATAACCTACCGTTCCTCTCGATTTGATATGAGTTTGAAACATGCATGCTTTCGCTCTTTTGCTTTAAAACGATGTCATCATTCCTATAAAAACGAGCACGTATCAATCTATAATTTTAAAAAGTCGGATCGTTACAAATCAATTAAATTATACGTGTAAAAATTTTATTTTATAAAGAAATTAAATAATTACTCCTAATGCCACCTAAACATCCCTTATTTGGCTAACAAGAGATTATAGCATTAAAGTGAAAATTTTGTTTTAAAAAAAATTAAAAAAATTACCTCTAATGTGTACTAAACATCCCTAAATAGGTTTATTTTAAAATAAAATTCCTTAAAAAGGTTATATCATTAAATTCATTGATTTTTTTTAATTTTACAATGAGAATAAAAAAATAAATAAATAAATAAAGAATTTGTTTGTTTGGTCTATAAATATTTTATATAATTCCTAAAATTTTAATTTTATTAATTTAGTTCATAAAATTTTAAAATGTTTTTTTTTTCGTTCTTTGTAAAATTTCAAAATATCAGAAAAATAAGATATAAATGAAATTAAAATTATAATAATAATATATATATATATATAAATGTTCACGTGGCCAGAAGGGAAAGATATCTCTATTTATTTAAATTTTCATCCCTATTAATTTTTTTCCGAATCATATATATATTAAAAAATATTTCTTTAAAAAAAATTAATTAATAATTTATCATTTTCTAAAAAAGGAATCCTAATAAATTCAATAATATTCGATAATTTAATGGGTAGAATATTACAGATCATATTTTTCAAACTAAAGTGGGTCCCACATCCACGTGGTGCATTCTTATTTTTCCACGTCAGTCATATTCTATAAATTAAATTAAAAAACAAAAAGAAAAACCGTCTCCTTTTCATTATAAAACCGCCTCGTCATCGTCTCCATCGCCACGACAAGCTCTGTTTTTACAGAGAAAAACAGAGTAAAACAGAGAAAAACAGAGGAAAAGAAAATGGCGAATCTTTCTATTTCATTTTTCTTCCTTTTTCTCCTCGCAGCTCTCCCATGGACTCGAACCCTCGAAGCGAAGAAAACCGTGCTTTGCAGACGCCATTGCCGGAAGCAGACCGTCACCAAGATCCAATTCTACTTCCACGACACCATCACCGGGAAGAATCCCTCCGCCATTAAGGTCGCAGAGGCCCCTTCCTCCACCAATTCACCGACGCTCTTCGGCACCGTGTCCATCGCCGACGACCCATTGACGGAAACGCCGGACCCGAAATCGAAGGAGGTGGGCAGGGCACAGGGGCTGTATTCGTCGGCCGCGCAGCAGGAGGTGGGTCTGCTCATGACACTGACCTATGTATTCACCGCCGGTAAGTTCAACGGCAGCTCCGTTGTTATTGTTGGGAAGAATTCGATTATGAATAAAGTCCGCGAATTGCCGGTGGTCGGAGGGACGGGGGCTTTCCGGTTCGCTCGTGGGTATGCTCTGGCGAGTACTTACTGGGCCAACAACGTTGGAGATGCAATTGTGGGTTATAATTTAACGGTTATACACTAA ATGGCAATTCCCCGGCTAGCTATCGTTCTCTCCGTCCTCTTCCTCGTCTCCATATCGGCCCGTTCCGAGTACTACTCCAGAACTTCCCGGCGTGTTCATCTAAAACCCAAGGTAACCCATCTCCGTTTCTTCCTTTTCGACATCCTAAGCGGCGATAAACCCACCGCTGTCAAAGTTGCGCATTCGAACGTCACCTTTGGCACGTCTGTGATCCCATTCGGCACCGTCTACGCCATCGACGACCCGCTTCGAGAGGGACCCGAATATAATTCGACATTGATCGGCAATGCCAGGGGGATGTATATGTCAGCAAGTAGAGGCTCAGATTTTTGCTTGGTGATGTACATTGACTACGCTTTCACTGCCGGCAAGTTCAAGGGCAGCTCCATCAGTGTGTTTTCGAGGAACCCGGTGACGGAGACGAAACGGGAGGTGGCGGTTGTCGGCGGGCGAGGGAAGTTTAGGATGGCTCGAGGGTTTGCTAAGCTTAAGACACATTATTTGAATGTCAACAATGCTCTCCCATGGACTCGAACCCTCGAAGCGAAGAAAACCGTGCTTTGCAGACGCCATTGCCGGAAGCAGACCGTCACCAAGATCCAATTCTACTTCCACGACACCATCACCGGGAAGAATCCCTCCGCCATTAAGGTCGCAGAGGCCCCTTCCTCCACCAATTCACCGACGCTCTTCGGCACCGTGTCCATCGCCGACGACCCATTGACGGAAACGCCGGACCCGAAATCGAAGGAGGTGGGCAGGGCACAGGGGCTGTATTCGTCGGCCGCGCAGCAGGAGGTGGGTCTGCTCATGACACTGACCTATGTATTCACCGCCGGTAAGTTCAACGGCAGCTCCGTTGTTATTGTTGGGAAGAATTCGATTATGAATAAAGTCCGCGAATTGCCGGTGGTCGGAGGGACGGGGGCTTTCCGGTTCGCTCGTGGGTATGCTCTGGCGAGTACTTACTGGGCCAACAACGTTGGAGATGCAATTGTGGGTTATAATTTAACGGTTATACACTAA ATGGCAATTCCCCGGCTAGCTATCGTTCTCTCCGTCCTCTTCCTCGTCTCCATATCGGCCCGTTCCGAGTACTACTCCAGAACTTCCCGGCGTGTTCATCTAAAACCCAAGGTAACCCATCTCCGTTTCTTCCTTTTCGACATCCTAAGCGGCGATAAACCCACCGCTGTCAAAGTTGCGCATTCGAACGTCACCTTTGGCACGTCTGTGATCCCATTCGGCACCGTCTACGCCATCGACGACCCGCTTCGAGAGGGACCCGAATATAATTCGACATTGATCGGCAATGCCAGGGGGATGTATATGTCAGCAAGTAGAGGCTCAGATTTTTGCTTGGTGATGTACATTGACTACGCTTTCACTGCCGGCAAGTTCAAGGGCAGCTCCATCAGTGTGTTTTCGAGGAACCCGGTGACGGAGACGAAACGGGAGGTGGCGGTTGTCGGCGGGCGAGGGAAGTTTAGGATGGCTCGAGGGTTTGCTAAGCTTAAGACACATTATTTGAATGTCAACAATGCTCTCCCATGGACTCGAACCCTCGAAGCGAAGAAAACCGTGCTTTGCAGACGCCATTGCCGGAAGCAGACCGTCACCAAGATCCAATTCTACTTCCACGACACCATCACCGGGAAGAATCCCTCCGCCATTAAGGTCGCAGAGGCCCCTTCCTCCACCAATTCACCGACGCTCTTCGGCACCGTGTCCATCGCCGACGACCCATTGACGGAAACGCCGGACCCGAAATCGAAGGAGGTGGGCAGGGCACAGGGGCTGTATTCGTCGGCCGCGCAGCAGGAGGTGGGTCTGCTCATGACACTGACCTATGTATTCACCGCCGGTAAGTTCAACGGCAGCTCCGTTGTTATTGTTGGGAAGAATTCGATTATGAATAAAGTCCGCGAATTGCCGGTGGTCGGAGGGACGGGGGCTTTCCGGTTCGCTCGTGGGTATGCTCTGGCGAGTACTTACTGGGCCAACAACGTTGGAGATGCAATTGTGGGTTATAATTTAACGGTTATACACTAA
BLAST of CmoCh02G003180 vs. Swiss-Prot
Match: DIR23_ARATH (Dirigent protein 23 OS=Arabidopsis thaliana GN=DIR23 PE=2 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 6.7e-46 Identity = 87/149 (58.39%), Postives = 115/149 (77.18%), Query Frame = 1
BLAST of CmoCh02G003180 vs. Swiss-Prot
Match: DIR1_ARATH (Dirigent protein 1 OS=Arabidopsis thaliana GN=DIR1 PE=2 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 1.0e-41 Identity = 85/150 (56.67%), Postives = 109/150 (72.67%), Query Frame = 1
BLAST of CmoCh02G003180 vs. Swiss-Prot
Match: DIR15_ARATH (Dirigent protein 15 OS=Arabidopsis thaliana GN=DIR15 PE=3 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 3.2e-40 Identity = 90/170 (52.94%), Postives = 121/170 (71.18%), Query Frame = 1
BLAST of CmoCh02G003180 vs. Swiss-Prot
Match: DIR2_ARATH (Dirigent protein 2 OS=Arabidopsis thaliana GN=DIR2 PE=2 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.6e-39 Identity = 80/144 (55.56%), Postives = 103/144 (71.53%), Query Frame = 1
BLAST of CmoCh02G003180 vs. Swiss-Prot
Match: DIR11_ARATH (Dirigent protein 11 OS=Arabidopsis thaliana GN=DIR11 PE=2 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 3.3e-37 Identity = 77/145 (53.10%), Postives = 102/145 (70.34%), Query Frame = 1
BLAST of CmoCh02G003180 vs. TrEMBL
Match: A0A087G244_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AAs47289U000600 PE=4 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 8.7e-85 Identity = 173/343 (50.44%), Postives = 232/343 (67.64%), Query Frame = 1
BLAST of CmoCh02G003180 vs. TrEMBL
Match: E5GC06_CUCME (Disease resistance response protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 2.4e-66 Identity = 126/168 (75.00%), Postives = 146/168 (86.90%), Query Frame = 1
BLAST of CmoCh02G003180 vs. TrEMBL
Match: A0A0A0LPM2_CUCSA (Disease resistance response protein OS=Cucumis sativus GN=Csa_2G264060 PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 3.1e-66 Identity = 127/168 (75.60%), Postives = 145/168 (86.31%), Query Frame = 1
BLAST of CmoCh02G003180 vs. TrEMBL
Match: A0A0A0LJ34_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G264050 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 1.9e-63 Identity = 126/173 (72.83%), Postives = 147/173 (84.97%), Query Frame = 1
BLAST of CmoCh02G003180 vs. TrEMBL
Match: E5GC07_CUCME (Disease resistance response protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 7.9e-62 Identity = 122/173 (70.52%), Postives = 145/173 (83.82%), Query Frame = 1
BLAST of CmoCh02G003180 vs. TAIR10
Match: AT2G21100.1 (AT2G21100.1 Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 186.0 bits (471), Expect = 3.8e-47 Identity = 87/149 (58.39%), Postives = 115/149 (77.18%), Query Frame = 1
BLAST of CmoCh02G003180 vs. TAIR10
Match: AT5G42510.1 (AT5G42510.1 Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 172.2 bits (435), Expect = 5.6e-43 Identity = 85/150 (56.67%), Postives = 109/150 (72.67%), Query Frame = 1
BLAST of CmoCh02G003180 vs. TAIR10
Match: AT4G38700.1 (AT4G38700.1 Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 167.2 bits (422), Expect = 1.8e-41 Identity = 90/170 (52.94%), Postives = 121/170 (71.18%), Query Frame = 1
BLAST of CmoCh02G003180 vs. TAIR10
Match: AT5G42500.1 (AT5G42500.1 Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 164.9 bits (416), Expect = 9.0e-41 Identity = 80/144 (55.56%), Postives = 103/144 (71.53%), Query Frame = 1
BLAST of CmoCh02G003180 vs. TAIR10
Match: AT1G22900.1 (AT1G22900.1 Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 157.1 bits (396), Expect = 1.9e-38 Identity = 77/145 (53.10%), Postives = 102/145 (70.34%), Query Frame = 1
BLAST of CmoCh02G003180 vs. NCBI nr
Match: gi|674230161|gb|KFK23946.1| (hypothetical protein AALP_AAs47289U000600 [Arabis alpina]) HSP 1 Score: 322.0 bits (824), Expect = 1.2e-84 Identity = 173/343 (50.44%), Postives = 232/343 (67.64%), Query Frame = 1
BLAST of CmoCh02G003180 vs. NCBI nr
Match: gi|659115651|ref|XP_008457663.1| (PREDICTED: dirigent protein 23-like [Cucumis melo]) HSP 1 Score: 260.8 bits (665), Expect = 3.4e-66 Identity = 126/168 (75.00%), Postives = 146/168 (86.90%), Query Frame = 1
BLAST of CmoCh02G003180 vs. NCBI nr
Match: gi|449458582|ref|XP_004147026.1| (PREDICTED: dirigent protein 23 [Cucumis sativus]) HSP 1 Score: 260.4 bits (664), Expect = 4.5e-66 Identity = 127/168 (75.60%), Postives = 145/168 (86.31%), Query Frame = 1
BLAST of CmoCh02G003180 vs. NCBI nr
Match: gi|700206791|gb|KGN61910.1| (hypothetical protein Csa_2G264050 [Cucumis sativus]) HSP 1 Score: 251.1 bits (640), Expect = 2.7e-63 Identity = 126/173 (72.83%), Postives = 147/173 (84.97%), Query Frame = 1
BLAST of CmoCh02G003180 vs. NCBI nr
Match: gi|449458580|ref|XP_004147025.1| (PREDICTED: dirigent protein 4 [Cucumis sativus]) HSP 1 Score: 251.1 bits (640), Expect = 2.7e-63 Identity = 126/173 (72.83%), Postives = 147/173 (84.97%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |