CmoCh02G003170 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGACTCTTTCAAATTCATTATTCCTCGTCCTTCTCCTCCTCGCCGCTCTCCCATGGACTCCAACTCTCAACGCAAAGAAACCCCTAATTTCCCGACACGATTCCCAGAAGCAAACCGTCACCAACATCCAATTCTACTTCCACGACACCCCCAGCGGCAACACCCCCTCCGCCATTAAGGTGGCAGAGGCCCCCTCCTCCGCCAACTCACCGACCCTCTTCGGCAACGTCTTCATCGCCGACGACCCATTGACCGAAACGCCGGACCCAAAATCCAAGGAGGTCGGCAGGGCACAGGGGCTGTATGCGTCGGCCTCGCAGCAGGAGCTGGCCCTGCTCATGACACTGACCTATCAATTCACCGCCGGCGAGTTCAACGGCAGCTCCATTGTTATTGTCGGGAAGAATTCGGTGATGCATAAAGTCCGTGAGCTGCCGGTGGTCGGAGGGACGGGCGTTTTCCGGTTCGCTCGCGGGTATGCTCTGGCGAGCACTTATTGGTTCAACACCGTTGGAGATGCGATTGTGGGTTATAATGTAACGGTTATACACTAAAAAAGGTGACCGGGTGGGCCGGTTGTTGCCCAATAATTTTATGTCTCTTTCATTTGCTCTACACATGTAGTTGTATCACTATATACGTTTGGTTCAAATATGAAGAACACTGCACCCTTTTGGGCGATTGGTCCGAGTTTACGATTTAAACCCTAAATTTTTCGAAGCTTAAAACACCATGTTCATGTGAAATATTTATCTTTATTTGATTTATAAATTAGTATACTTTTTAATCGATTAAATTGAGTTCTTTTTGTTAGTTCTAACTAATCTTCTTGGTCAAGTGTGATTGGTGGCCAACTTCACTAGCTTCTACCAACTCGTCAGTGACCTCGTAAATTCTTCAAGATCAATACGAGTTCTTCTAGTATGTTTTGTCTTCGTTTTAGGAGATCTCCCACGCTTAATCATGAAGTTCCTATCGAAAAGAGAGGTGCACCTTGTTGGTATAAGTAGTAAGTTTCATTTATTTTGAGTCTGATTTAGTTATCTTATCTTCTTGATTACTCTCATTTAGATATAGTCTCGATTCATTCATGTACTACTCTTTTACTCCAGTGTCACAACTTTTTAATCTCTACTGTATTAATATTCATGCAGGGAATGAACTCTTCATCCACGTAGTAGAAGTATTGGGAACCGTTTTGATTTTTATTATGAATTAAAATAAAGTAATAAATTCAAGAGTACGAACTCTACCTTTGTAGAAATTCTAGCTTGTAAGACTCTTTGAAGTATTTCAACTATGCAAAAGTTCTTTCACATTCCACAAGATCTTCCTTACTATGACTCGAACATAAGATCAAAGTTTGTGGGAGACTCTTAAAAGAAAATCCCAAAAGGATTGGAGAATGAAAGTTTCGAAAGAATTGTATGTAGAGGTAGTTTCATTATCGAGATGAAATGGGAGATTCGTATGTCTTTGGTTTAACCTCTTATTTTCAGGATAAGAATTTTGTCAAATAATATATTTGCATATCTAATATATTAGGATATAATGTCTTATACAAATCATATTTAAATATTATATGATATCCTAATATATATTTAACTAATTTGAATCTCATTCAAATTTCAAATATATTCTTATTTAATATATCAAAATATATTTATTAATTAATTTAATATTTAATTGTATCAAATACAAAAAAAAATATATATATATATTTTCTTTAATATATATAATATATTAAATATTAATTTGAACTTTCAAATTAATATATTTTTTCTCCATTTATATTTAATATTAAATATTAAATATTAAATTGAACCCTTCAAATTAAATATATTTTCTCTCTTTATTTAATATATTTAATATTAATTTAATTAAATTTATTTTTTTCTTTATATTTAATATATCTAATATATTAAATATCAATTTCAACCTTTTCAATTTTCTTTTAAATAAATAAACTTTAGCATTGATATGAGCTAGCAAAAGGACCTTGTAGACCTACCGATCATAAGCTCTAATGATATAAAATTAATTAATTAAACTTTTTAATTAATCAATTTTCTTTCATTAACTATAGATTAGGTAGACTAGAGTTTCACTCTTGTAAATAAGTTATGTTAATTAATATAATCATTACAAGCAAGTGGATTCTTCACAAATTGTTCTATAGATGGGTCAAAAGTCTGTTATACCCTCTAATTACATCTTTCCCCTTAAATACCACTAATTCTCTACTTAGCAATTTTTTTATGATACAATCATAAACCAGTCCCTTTCGTACCAATGAGAGGGTGGGGCCCTATTGTTCAAGTCCTTAAATCAATACTTAGAACAACTCATCTACTCTTCTTATATGGAAAATGGTGAATTCCATCTCATGATATTATGTTCTCAACTCTCTATTGGGTGAAGTTCCCAAAATGGTAGACATATTGAATTGGATAAAAGAGTCATTCTCGCCCATGTAAATCAAAGGACAAGCCCTTAGGAGTTCATAACTCACTCAGGATTAAGATCGAGTCACATATGATCATCATGTAAAATATTGAGCTTCTCAATTAACGGTTTTATAAAGAGTGATTAAATATGTTTTGGTCCAGTCATGTACAAACTCATTGTATATGATACTCCCACTTACATGTCTCCACATGAACGATTTAAATCAAATCATTTGTAACGATTAAAAAGTGGGCCGTGTCAATAATGTTACCAGAATAAGACACCTACCTCATCCATATACTATAACTCTATAGGTTATTACTTGAACACGATCGTCTTGTATGTCAACCACACACGGTTCAAGATTACGTTAATAACTTTGGACTTTCATACCATGGATAATAATTAGATTACAAATAAAACAATAAAAATTATTGTTATAAACTAAATAATTAATTAAGAGACTTTAGGGCATAAATCCCAACAATTCAATCGGGTGATCTTCATTAGTCAAGCTTTGACTTCCAAACGGAAACCGAATCCATCACACGGATACAAATTCTCAATCTCGATCTCAATTTATATTTATTTAAAGTAATCTTTACCCTTAAAAATAATTCGAAACAAATAGACAACGAAATCATGTCGGAGGAGATAAAAGTGAAATACCAACGCTATCATATGTTGGGTCCAATATTTGAAGGTATATAAAGTGGACAAAATGGGTATAATGAAATGAATACTCATGATGTTGGGTTGGTACTTGGCTTAGAATACACACACATGAAGTGGGATGCTCATGGCATCGGGACAATGCGCAAAAGGGGCGAGTGGCATGCGCATTTCAAAGCGTAAGTGGGACGAAAATGGTTCAAAAATCACCTCTACACATGGACCAAAATTTTTACTAAGACGTTCTTAATCCCGAAGCACCAAGAGATCAGACATCTAAACAATCTGTTCCTCTAACCCAAACTATACTAATGTGACTTCTGAATGGTATTTCAAAATGTTGCGATCAATCAAGCCGGGTAGAGAAGCTAAGATCAATCAGGCCGGATAGCAGAGGTGTTGAAAAAGTGAATACTACAGTGACAAGTACATTACTTATATTTGGTGACCATGTTCTTATTTTATTTGCTTTAGGTCTACAAACTCTTATATTTGCCACATTTGTGAGACAATTAAAATAGGAACTCGAGTCGTTAGGGTTTAGTTTGACACTGTATATTTTGGCTGGAATTACATTATTGGCTAGGGAGAGGTGTTGATACAATAAACAGGCATGTTCCTAATACGTCGAGGAACATAGAGGCGGGTATGCTAGTATAGTCGACATCAACAGTATGGATATAACACCAATACAAGTAGTAATAACTTTTCGAATTTCTTTCCTAATGTTTTGTCACGATCTGCCTCCCGAAAAAACCCTAATTCTAAGACATCGTATAGAATCACCCCAGTAGAATCGAAGGAATTAAAAATACAATTACGAGAGTCAACGAACAAGAAATTTATACATCCAATCGCGTCATCCAGTGAACCACCATCCTATTTATGAAAACGAAAGATCGATCTTTGTGATTATACACAGATTATAGATAATTGAACAAAGTAACAACGAAGAACAAACATCATATCCCACGAATCAATGAATTATTGAATTGTTTTAAAAAAACGATAAATAATTACAACTAATATGCCAACATCCCTTCAAAGAATCACCTTTTACTAAGAAAAGTTTAACCTTTAACTCGTTATTTGTTCTTTTCATCCAATTTTATTGCTTAAAAGCTAACTTTTTTCTTTTTACACGTCACTCATGTTCTAGAAACAACCAAGAACAACAACAGAAAAAACACGTCCCCTTTTATTGGAATATATTTTATACAGCTGTAATTAGTTTTATGTTCGGATCATTAAAATATTTTCTCTTATTTTTAAGATTTAGTTTGTAGTTTGTATTTTATTTAGAACATTAATGAAAATAGGACTTTAGATCCCACGGGTACTTTTGATCCCACCTATGTTTATCGGGATCCCTCTGTATCTCATTCTTAATATGGTATTAGAGCATCGTTCTTAACACTTTTTCATTATAAAAACCTTCTCGTCTTCTTCTCCATTCCACAAAAGAATGGCGAATCTTTCTCTTTCATTCTCCTTCATTCTTCTCCTCGCCGCTCTCCCATGGACTCGAACCCTCCACGCAAAGAAAACCAACGTCCAATTCTACTTCCACGACACCGTCACCGGGAAAACCCCCTCCGCCATTAAGGTGGCGGAGGCCCCAACCTCCGCCAAATCACCGACACTCTTCGGCGTCGTGTTCATTATCGACGACCCATTAACGGAAAAGCCGGACCCGAAATCGAAGGAGGTGGGCAGGGCACAGGGGCTGTATGCGTCGGCCGCGCAGCAGGAGGTGGGTTTGCTCATGACACTAACCTATCAATTCACCGCCGGCGAGTTCAACGGCAGCTCCATTGTTATTGTGGGGAAGAATTCGGTGTTCCATAAAGTCCGTGAGCTGCCGGTGGTCGGAGGGACAGGGGCTTTCCGGTTCGCTCGTGGGTATGCTCTGGCGAGGACTTATTGGTTTAACGCCGCCGGAGATGCGATTGTGGGTTATAATGTGACGGTTTTACACTAA ATGGCGACTCTTTCAAATTCATTATTCCTCGTCCTTCTCCTCCTCGCCGCTCTCCCATGGACTCCAACTCTCAACGCAAAGAAACCCCTAATTTCCCGACACGATTCCCAGAAGCAAACCGTCACCAACATCCAATTCTACTTCCACGACACCCCCAGCGGCAACACCCCCTCCGCCATTAAGGTGGCAGAGGCCCCCTCCTCCGCCAACTCACCGACCCTCTTCGGCAACGTCTTCATCGCCGACGACCCATTGACCGAAACGCCGGACCCAAAATCCAAGGAGGTCGGCAGGGCACAGGGGCTGTATGCGTCGGCCTCGCAGCAGGAGCTGGCCCTGCTCATGACACTGACCTATCAATTCACCGCCGGCGAGTTCAACGGCAGCTCCATTGTTATTGTCGGGAAGAATTCGGTGATGCATAAAGTCCGTGAGCTGCCGGTGGTCGGAGGGACGGGCGTTTTCCGGTTCGCTCGCGGGTATGCTCTGGCGAGCACTTATTGGTTCAACACCGTTGGAGATGCGATTGTGGGTTATAATGTAACGAAAACCAACGTCCAATTCTACTTCCACGACACCGTCACCGGGAAAACCCCCTCCGCCATTAAGGTGGCGGAGGCCCCAACCTCCGCCAAATCACCGACACTCTTCGGCGTCGTGTTCATTATCGACGACCCATTAACGGAAAAGCCGGACCCGAAATCGAAGGAGGTGGGCAGGGCACAGGGGCTGTATGCGTCGGCCGCGCAGCAGGAGGTGGGTTTGCTCATGACACTAACCTATCAATTCACCGCCGGCGAGTTCAACGGCAGCTCCATTGTTATTGTGGGGAAGAATTCGGTGTTCCATAAAGTCCGTGAGCTGCCGGTGGTCGGAGGGACAGGGGCTTTCCGGTTCGCTCGTGGGTATGCTCTGGCGAGGACTTATTGGTTTAACGCCGCCGGAGATGCGATTGTGGGTTATAATGTGACGGTTTTACACTAA ATGGCGACTCTTTCAAATTCATTATTCCTCGTCCTTCTCCTCCTCGCCGCTCTCCCATGGACTCCAACTCTCAACGCAAAGAAACCCCTAATTTCCCGACACGATTCCCAGAAGCAAACCGTCACCAACATCCAATTCTACTTCCACGACACCCCCAGCGGCAACACCCCCTCCGCCATTAAGGTGGCAGAGGCCCCCTCCTCCGCCAACTCACCGACCCTCTTCGGCAACGTCTTCATCGCCGACGACCCATTGACCGAAACGCCGGACCCAAAATCCAAGGAGGTCGGCAGGGCACAGGGGCTGTATGCGTCGGCCTCGCAGCAGGAGCTGGCCCTGCTCATGACACTGACCTATCAATTCACCGCCGGCGAGTTCAACGGCAGCTCCATTGTTATTGTCGGGAAGAATTCGGTGATGCATAAAGTCCGTGAGCTGCCGGTGGTCGGAGGGACGGGCGTTTTCCGGTTCGCTCGCGGGTATGCTCTGGCGAGCACTTATTGGTTCAACACCGTTGGAGATGCGATTGTGGGTTATAATGTAACGAAAACCAACGTCCAATTCTACTTCCACGACACCGTCACCGGGAAAACCCCCTCCGCCATTAAGGTGGCGGAGGCCCCAACCTCCGCCAAATCACCGACACTCTTCGGCGTCGTGTTCATTATCGACGACCCATTAACGGAAAAGCCGGACCCGAAATCGAAGGAGGTGGGCAGGGCACAGGGGCTGTATGCGTCGGCCGCGCAGCAGGAGGTGGGTTTGCTCATGACACTAACCTATCAATTCACCGCCGGCGAGTTCAACGGCAGCTCCATTGTTATTGTGGGGAAGAATTCGGTGTTCCATAAAGTCCGTGAGCTGCCGGTGGTCGGAGGGACAGGGGCTTTCCGGTTCGCTCGTGGGTATGCTCTGGCGAGGACTTATTGGTTTAACGCCGCCGGAGATGCGATTGTGGGTTATAATGTGACGGTTTTACACTAA
BLAST of CmoCh02G003170 vs. Swiss-Prot
Match: DIR23_ARATH (Dirigent protein 23 OS=Arabidopsis thaliana GN=DIR23 PE=2 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 3.4e-47 Identity = 88/145 (60.69%), Postives = 116/145 (80.00%), Query Frame = 1
BLAST of CmoCh02G003170 vs. Swiss-Prot
Match: DIR1_ARATH (Dirigent protein 1 OS=Arabidopsis thaliana GN=DIR1 PE=2 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 8.7e-43 Identity = 87/151 (57.62%), Postives = 108/151 (71.52%), Query Frame = 1
BLAST of CmoCh02G003170 vs. Swiss-Prot
Match: DIR2_ARATH (Dirigent protein 2 OS=Arabidopsis thaliana GN=DIR2 PE=2 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 2.8e-41 Identity = 85/152 (55.92%), Postives = 107/152 (70.39%), Query Frame = 1
BLAST of CmoCh02G003170 vs. Swiss-Prot
Match: DIR21_ARATH (Dirigent protein 21 OS=Arabidopsis thaliana GN=DIR21 PE=3 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.3e-38 Identity = 78/145 (53.79%), Postives = 107/145 (73.79%), Query Frame = 1
BLAST of CmoCh02G003170 vs. Swiss-Prot
Match: DIR11_ARATH (Dirigent protein 11 OS=Arabidopsis thaliana GN=DIR11 PE=2 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 2.7e-36 Identity = 76/144 (52.78%), Postives = 99/144 (68.75%), Query Frame = 1
BLAST of CmoCh02G003170 vs. TrEMBL
Match: A0A087G244_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AAs47289U000600 PE=4 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 3.7e-77 Identity = 149/304 (49.01%), Postives = 213/304 (70.07%), Query Frame = 1
BLAST of CmoCh02G003170 vs. TrEMBL
Match: E5GC06_CUCME (Disease resistance response protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 7.8e-75 Identity = 147/182 (80.77%), Postives = 162/182 (89.01%), Query Frame = 1
BLAST of CmoCh02G003170 vs. TrEMBL
Match: A0A0A0LPM2_CUCSA (Disease resistance response protein OS=Cucumis sativus GN=Csa_2G264060 PE=4 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 4.3e-73 Identity = 144/182 (79.12%), Postives = 159/182 (87.36%), Query Frame = 1
BLAST of CmoCh02G003170 vs. TrEMBL
Match: A0A0D3HIW3_9ORYZ (Uncharacterized protein OS=Oryza barthii PE=4 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 9.9e-70 Identity = 150/322 (46.58%), Postives = 198/322 (61.49%), Query Frame = 1
BLAST of CmoCh02G003170 vs. TrEMBL
Match: A0A0E0CQR9_9ORYZ (Uncharacterized protein OS=Oryza meridionalis PE=4 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 3.9e-66 Identity = 139/307 (45.28%), Postives = 192/307 (62.54%), Query Frame = 1
BLAST of CmoCh02G003170 vs. TAIR10
Match: AT2G21100.1 (AT2G21100.1 Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 190.3 bits (482), Expect = 1.9e-48 Identity = 88/145 (60.69%), Postives = 116/145 (80.00%), Query Frame = 1
BLAST of CmoCh02G003170 vs. TAIR10
Match: AT5G42510.1 (AT5G42510.1 Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 175.6 bits (444), Expect = 4.9e-44 Identity = 87/151 (57.62%), Postives = 108/151 (71.52%), Query Frame = 1
BLAST of CmoCh02G003170 vs. TAIR10
Match: AT5G42500.1 (AT5G42500.1 Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 170.6 bits (431), Expect = 1.6e-42 Identity = 85/152 (55.92%), Postives = 107/152 (70.39%), Query Frame = 1
BLAST of CmoCh02G003170 vs. TAIR10
Match: AT1G65870.1 (AT1G65870.1 Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 161.8 bits (408), Expect = 7.3e-40 Identity = 78/145 (53.79%), Postives = 107/145 (73.79%), Query Frame = 1
BLAST of CmoCh02G003170 vs. TAIR10
Match: AT1G22900.1 (AT1G22900.1 Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 154.1 bits (388), Expect = 1.5e-37 Identity = 76/144 (52.78%), Postives = 99/144 (68.75%), Query Frame = 1
BLAST of CmoCh02G003170 vs. NCBI nr
Match: gi|674230161|gb|KFK23946.1| (hypothetical protein AALP_AAs47289U000600 [Arabis alpina]) HSP 1 Score: 296.6 bits (758), Expect = 5.4e-77 Identity = 149/304 (49.01%), Postives = 213/304 (70.07%), Query Frame = 1
BLAST of CmoCh02G003170 vs. NCBI nr
Match: gi|659115651|ref|XP_008457663.1| (PREDICTED: dirigent protein 23-like [Cucumis melo]) HSP 1 Score: 288.9 bits (738), Expect = 1.1e-74 Identity = 147/182 (80.77%), Postives = 162/182 (89.01%), Query Frame = 1
BLAST of CmoCh02G003170 vs. NCBI nr
Match: gi|449458582|ref|XP_004147026.1| (PREDICTED: dirigent protein 23 [Cucumis sativus]) HSP 1 Score: 283.1 bits (723), Expect = 6.1e-73 Identity = 144/182 (79.12%), Postives = 159/182 (87.36%), Query Frame = 1
BLAST of CmoCh02G003170 vs. NCBI nr
Match: gi|823161182|ref|XP_012480456.1| (PREDICTED: dirigent protein 23 [Gossypium raimondii]) HSP 1 Score: 214.5 bits (545), Expect = 2.7e-52 Identity = 104/175 (59.43%), Postives = 139/175 (79.43%), Query Frame = 1
BLAST of CmoCh02G003170 vs. NCBI nr
Match: gi|1009151269|ref|XP_015893463.1| (PREDICTED: dirigent protein 23-like [Ziziphus jujuba]) HSP 1 Score: 209.9 bits (533), Expect = 6.6e-51 Identity = 100/147 (68.03%), Postives = 123/147 (83.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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