CmoCh02G001960 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh02G001960
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	RAC-like GTP binding protein 5
Location	Cmo_Chr02 : 920056 .. 922811 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCTTTTTTGTTTGGGCGTCCGCTTAAAGAAACGGGAAGCTTTTGACACCCACAAAGCAAAAGTGGAAGCTAGATTCCCAGTTTGTTCATATCATTAAAGCCCCCTCCATTTCTGTTCAAATTTCAAACCCAAATCCCACTTCTTCTTACCTTTCGTTATCTTCTTTCTTCTTCCCTTTTCAATTTCTTGCTCTTTTTTTACCAATGGAGACTCAGAAACCAAATTCAGAGAAGTGGGTCATTTTCTGAGAGATCGAATTCGCAGCGATTGGTGAAGATTATACTCAAAAACTCAAAAGGGGTTTCGAAATGAGTACGGCTCGATTCATCAAGTGCGTTACTGTTGGAGATGGCGCTGTCGGGAAGACTTGCATGCTCATTTCCTACACTAGCAACACCTTCCCAAGTGTAAGTTTCAGTGTATCTTCGTTTCCCTTCTTCATTTTTGGTTGCTAATGGAAGCTTGGAGCTAATTTTGACCTCTTGATTTAGGACTATGTGCCGACGGTTTTTGATAACTTTAGTGCTAATGTGGTGGTCGACGGCAGCACTGTGAGCTTGGGGCTTTGGGACACTGCTGGTGAGAAACTTAACCCTGAATCCACTTTCTTGTTGAGGATTGACAACTTTAGAGGATGATCATAGGTTTATAAGTAAGGAACCAAAGGTATGAGCCCTTTTTAGGAAGCCACTTATGCTCAAGGTGGACAATAAAATACTATTGTGGAGAGTTGTGGTTTCTAACCTGGTATTAGAGGCTTGGTCATGTCAATAGAATCCTCAAATGTCGAACAAAGAAGTTGTGAATCTCGAAGGTATAGTCAAAAGTGACTCAAGTGTCGAACAAAGGGTGTACTTTGTTCGAGGGCTCTCCATGGGCTTCAGGGGAGGCTCTATGTGTACTTTGTTCGAGGAGAGTCTCTCCTCTCGGCTAATATAGGGAATGATCAGGAGCCCTTTTTGAATTTGGGTTTCAGTTTATAGAAATTTAGAGTCCTTGGTTTTTGAATGTTTGAAGAAAGAAAATGAAGTCCTTCATTAATTTCAGGGCAGGAAGATTACAACAGGCTGAGGCCTTTGAGTTACAGAGGAGCAGATGTGTTTCTGTTGGCATTTTCTCTAATCAGCAAAGCTAGCTATGAAAATATCTCTAAGAAGGTTAATTATTATCCTCTGTTTTTGTTGAAGTACCATGGATTGTTTCATGTTATTAGAGTATCAGGCTTATTACTTGATATCCCAATCCACAGTGGATCCCGGAGCTGCGGCATTATGCCCCGACCGTGCCGATTGTTCTTGTGGGAACTAAACTTGGTAATGACAATAATGTTCAAACACATCAGGGAGTTATCAAAAAACTGAGGATGTTTTGATGGGTCGTTTGATGTTTAAATGGTTACTTGTTTGCAGATTTGAGGGATGACAAACAATATCTGTCCAGCCATCCTGGGGCTGTTCCGATCACGACCGTGCAGGTACTGCTCGTAAACGAATCAGTCACATTGTAGCAGCCTCCTCGAATTGTTTCTCGTAGTTATCGTTTTTGAATTCATGGATCTGATGGAACAGAGAATTCTTGGTGGCTTTATTTTGACAGGGTGAAGAACTGAAGAAGTCAATTGGTGCTGCTGTTTATATAGAATGCAGCTCCAAAACGCAGCAGGTAATTGAAAGTGAAGCCAAATTTGGCATCTTAATGTGTCATTTGACTGAAAAGAGCTATGAAAGTAAATCTTTGATCATGAAGATATGTCATTATACAATCTTCTAATGGTTTACTCTCATATGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAGCATTGCTTGTAAGGGTGTGGAAACCTCTCATTAGTAGACGTGTTCTAAAAATTTTGAGGGGAAGCCCAAAAGGGAAATCACAAGACAAGATTTGCTAGCGGTGGGATTGGGCCAATATAAATGGTAAGCACCAAGCGGTGTGCCAGTGAGGACGCTGGCCCCCAAAGAGGGTGGATTGTGAGATCTCATATCGGTTGGAGAAGGGAACTAAACATTCCTTATAAGGGTCGGAAAACCTCTCCCTAGTAGACGCGTTCTAAAAACCTTGAGAGGAAGCCCAAAAGGGAAATTCCAAAGAGGACAGTATCTGCTAGTGGTGGGATTGTGCCATTACAAATGGTATCAGAGCCAGACACCGAACGGTGTGCCAACGAGAGCGCTGGCTCCCAAGGGGGTGAAATGTGAGATCTCACATCTGTTGAAGAAGGGAACAAAGTATTCTTTATAAGAGTGTAGAAACCTCTTATTGGTAAGCACGTTTTAAAAACCTCAAGGGGAAACTCAAAAGAGAAAGTCTAAAGAGGAAGACAATATCTGCTAGTGATGGCGAGTGGTGGGATTGGGCCATTACATCATACTACCTCAACTTCATCTTTAAGATTTTAACAGAGTTGACTAAGGTAACGAATTCAAATCAAGCAATCAAACCTTAACTATCTCCCATGTCGTGATTTGCAGAACGTGAAGACTGTGTTTGACGCTGCCATCAAGGTCGTTCTACAGCCACCGAAACCGAAGAGAAAGCGACGAAAGGCCACAAAATGTGTGTTTCTTTGAGCTGGGTATCATGTCATTCAGTTTGTGTTGTGGAAGACTTGGCCTCCTCTATGAGCTGGGTCTCATTGTTATTCTTGCTTGTTATATTAATCTTCTTGTTTAATATGAAAGGGCTGAAGTTTTCATTGTGAAAGAGATCTTTTAGTTCTGCCAAAA

mRNA sequence

TTCCTTTTTTGTTTGGGCGTCCGCTTAAAGAAACGGGAAGCTTTTGACACCCACAAAGCAAAAGTGGAAGCTAGATTCCCAGTTTGTTCATATCATTAAAGCCCCCTCCATTTCTGTTCAAATTTCAAACCCAAATCCCACTTCTTCTTACCTTTCGTTATCTTCTTTCTTCTTCCCTTTTCAATTTCTTGCTCTTTTTTTACCAATGGAGACTCAGAAACCAAATTCAGAGAAGTGGGTCATTTTCTGAGAGATCGAATTCGCAGCGATTGGTGAAGATTATACTCAAAAACTCAAAAGGGGTTTCGAAATGAGTACGGCTCGATTCATCAAGTGCGTTACTGTTGGAGATGGCGCTGTCGGGAAGACTTGCATGCTCATTTCCTACACTAGCAACACCTTCCCAAGTGACTATGTGCCGACGGTTTTTGATAACTTTAGTGCTAATGTGGTGGTCGACGGCAGCACTGTGAGCTTGGGGCTTTGGGACACTGCTGGGCAGGAAGATTACAACAGGCTGAGGCCTTTGAGTTACAGAGGAGCAGATGTGTTTCTGTTGGCATTTTCTCTAATCAGCAAAGCTAGCTATGAAAATATCTCTAAGAAGTGGATCCCGGAGCTGCGGCATTATGCCCCGACCGTGCCGATTGTTCTTGTGGGAACTAAACTTGATTTGAGGGATGACAAACAATATCTGTCCAGCCATCCTGGGGCTGTTCCGATCACGACCGTGCAGGGTGAAGAACTGAAGAAGTCAATTGGTGCTGCTGTTTATATAGAATGCAGCTCCAAAACGCAGCAGAACGTGAAGACTGTGTTTGACGCTGCCATCAAGGTCGTTCTACAGCCACCGAAACCGAAGAGAAAGCGACGAAAGGCCACAAAATGTGTGTTTCTTTGAGCTGGGTATCATGTCATTCAGTTTGTGTTGTGGAAGACTTGGCCTCCTCTATGAGCTGGGTCTCATTGTTATTCTTGCTTGTTATATTAATCTTCTTGTTTAATATGAAAGGGCTGAAGTTTTCATTGTGAAAGAGATCTTTTAGTTCTGCCAAAA

Coding sequence (CDS)

ATGAGTACGGCTCGATTCATCAAGTGCGTTACTGTTGGAGATGGCGCTGTCGGGAAGACTTGCATGCTCATTTCCTACACTAGCAACACCTTCCCAAGTGACTATGTGCCGACGGTTTTTGATAACTTTAGTGCTAATGTGGTGGTCGACGGCAGCACTGTGAGCTTGGGGCTTTGGGACACTGCTGGGCAGGAAGATTACAACAGGCTGAGGCCTTTGAGTTACAGAGGAGCAGATGTGTTTCTGTTGGCATTTTCTCTAATCAGCAAAGCTAGCTATGAAAATATCTCTAAGAAGTGGATCCCGGAGCTGCGGCATTATGCCCCGACCGTGCCGATTGTTCTTGTGGGAACTAAACTTGATTTGAGGGATGACAAACAATATCTGTCCAGCCATCCTGGGGCTGTTCCGATCACGACCGTGCAGGGTGAAGAACTGAAGAAGTCAATTGGTGCTGCTGTTTATATAGAATGCAGCTCCAAAACGCAGCAGAACGTGAAGACTGTGTTTGACGCTGCCATCAAGGTCGTTCTACAGCCACCGAAACCGAAGAGAAAGCGACGAAAGGCCACAAAATGTGTGTTTCTTTGA

Homology

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BLAST of CmoCh02G001960 vs. Swiss-Prot
Match: RAC2_LOTJA (Rac-like GTP-binding protein RAC2 OS=Lotus japonicus GN=RAC2 PE=2 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 5.5e-101
Identity = 178/196 (90.82%), Postives = 188/196 (95.92%), Query Frame = 1


Query: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPSDYVPTVFDNFSANVVVDGSTVSLGLWD 60
           MSTARFIKCVTVGDGAVGKTCMLISYTSNTFP+DYVPTVFDNFSANVVVDGSTV+LGLWD
Sbjct: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSL+S+ASYENISKKWIPELRHYAPTVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLLSRASYENISKKWIPELRHYAPTVPIVLVGTKL 120

Query: 121 DLRDDKQYLSSHPGAVPITTVQGEELKKSIGAAVYIECSSKTQQNVKTVFDAAIKVVLQP 180
           DLR+D+QYL  HPGA PITT QGEELKK+IGAAVY+ECSSKTQQNVK VFDAAIKVVLQP
Sbjct: 121 DLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKPKRKRRKATKCVFL 197
           PKPK+KR+K   CVFL
Sbjct: 181 PKPKKKRKKTRPCVFL 196

[Close]

BLAST of CmoCh02G001960 vs. Swiss-Prot
Match: RAC5_ARATH (Rac-like GTP-binding protein ARAC5 OS=Arabidopsis thaliana GN=ARAC5 PE=1 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 5.3e-96
Identity = 168/196 (85.71%), Postives = 183/196 (93.37%), Query Frame = 1


Query: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPSDYVPTVFDNFSANVVVDGSTVSLGLWD 60
           MS +RFIKCVTVGDGAVGKTCMLISYTSNTFP+DYVPTVFDNFSANVVVDG+TV+LGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYEN++KKWIPELRHYAP VPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120

Query: 121 DLRDDKQYLSSHPGAVPITTVQGEELKKSIGAAVYIECSSKTQQNVKTVFDAAIKVVLQP 180
           DLRDDKQ+   HPGAVPITT QGEELKK IG+ +YIECSSKTQQNVK VFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKPKRKRRKATKCVFL 197
           PK K+K++   +CVFL
Sbjct: 181 PKQKKKKKNKNRCVFL 196

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BLAST of CmoCh02G001960 vs. Swiss-Prot
Match: RAC5_ORYSJ (Rac-like GTP-binding protein 5 OS=Oryza sativa subsp. japonica GN=RAC5 PE=2 SV=2)

HSP 1 Score: 350.9 bits (899), Expect = 9.0e-96
Identity = 171/197 (86.80%), Postives = 183/197 (92.89%), Query Frame = 1


Query: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPSDYVPTVFDNFSANVVVDGSTVSLGLWD 60
           MS +RFIKCVTVGDGAVGKTCMLISYTSNTFP+DYVPTVFDNFSANVVVDGSTV+LGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYEN+SKKWIPELRHYAP VPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELRHYAPGVPIILVGTKL 120

Query: 121 DLRDDKQYLSSHPGAVPITTVQGEELKKSIGAAVYIECSSKTQQNVKTVFDAAIKVVLQP 180
           DLRDDKQ+   HPGAVPI+T QGEEL+K IGAA YIECSSKTQQN+K VFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPISTAQGEELRKLIGAAAYIECSSKTQQNIKAVFDAAIKVVLQP 180

Query: 181 PKPKRKRRKATK-CVFL 197
           PK K+K++KA K C  L
Sbjct: 181 PKQKKKKKKAQKGCAIL 197

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BLAST of CmoCh02G001960 vs. Swiss-Prot
Match: RAC13_GOSHI (Rac-like GTP-binding protein RAC13 OS=Gossypium hirsutum GN=RAC13 PE=2 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 2.6e-95
Identity = 172/196 (87.76%), Postives = 178/196 (90.82%), Query Frame = 1


Query: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPSDYVPTVFDNFSANVVVDGSTVSLGLWD 60
           MSTARFIKCVTVGDGAVGKTCMLISYTSNTFP+DYVPTVFDNFSANVVVDGSTV+LGLWD
Sbjct: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENI KKWIPELRHYA  VP+VLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIYKKWIPELRHYAHNVPVVLVGTKL 120

Query: 121 DLRDDKQYLSSHPGAVPITTVQGEELKKSIGAAVYIECSSKTQQNVKTVFDAAIKVVLQP 180
           DLRDDKQ+L  HPGA PI+T QGEELKK IGA  YIECSSKTQQNVK VFDAAIKV L+P
Sbjct: 121 DLRDDKQFLIDHPGATPISTSQGEELKKMIGAVTYIECSSKTQQNVKAVFDAAIKVALRP 180

Query: 181 PKPKRKRRKATKCVFL 197
           PKPKRK  K   C FL
Sbjct: 181 PKPKRKPCKRRTCAFL 196

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BLAST of CmoCh02G001960 vs. Swiss-Prot
Match: RAC4_ARATH (Rac-like GTP-binding protein ARAC4 OS=Arabidopsis thaliana GN=ARAC4 PE=1 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 2.6e-95
Identity = 168/193 (87.05%), Postives = 181/193 (93.78%), Query Frame = 1


Query: 4   ARFIKCVTVGDGAVGKTCMLISYTSNTFPSDYVPTVFDNFSANVVVDGSTVSLGLWDTAG 63
           +RFIKCVTVGDGAVGKTCMLISYTSNTFP+DYVPTVFDNFSANVVVDG+TV+LGLWDTAG
Sbjct: 3   SRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAG 62

Query: 64  QEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKLDLR 123
           QEDYNRLRPLSYRGADVF+LAFSLISKASYENI+KKWIPELRHYAP VPI+LVGTKLDLR
Sbjct: 63  QEDYNRLRPLSYRGADVFILAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKLDLR 122

Query: 124 DDKQYLSSHPGAVPITTVQGEELKKSIGAAVYIECSSKTQQNVKTVFDAAIKVVLQPPKP 183
           DDKQ+   HPGAVPITT QGEELKK IG+AVYIECSSKTQQNVK VFDAAIKVVLQPPK 
Sbjct: 123 DDKQFFIDHPGAVPITTNQGEELKKLIGSAVYIECSSKTQQNVKAVFDAAIKVVLQPPKQ 182

Query: 184 KRKRRKATKCVFL 197
           K+K++   +C FL
Sbjct: 183 KKKKKNKNRCAFL 195

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BLAST of CmoCh02G001960 vs. TrEMBL
Match: A0A0A0LQB2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G415560 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 1.4e-103
Identity = 189/196 (96.43%), Postives = 193/196 (98.47%), Query Frame = 1


Query: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPSDYVPTVFDNFSANVVVDGSTVSLGLWD 60
           MSTARFIKCVTVGDGAVGKTCMLISYTSNTFP+DYVPTVFDNFSANVVVDGSTV+LGLWD
Sbjct: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL 120

Query: 121 DLRDDKQYLSSHPGAVPITTVQGEELKKSIGAAVYIECSSKTQQNVKTVFDAAIKVVLQP 180
           DLRDDKQ+L+SHPGAVPITT QGEELKKSIGAAVYIECSSKTQQNVK VFDAAIKVVLQP
Sbjct: 121 DLRDDKQFLTSHPGAVPITTAQGEELKKSIGAAVYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKPKRKRRKATKCVFL 197
           PKPKRKRRKA KCVFL
Sbjct: 181 PKPKRKRRKARKCVFL 196

[Close]

BLAST of CmoCh02G001960 vs. TrEMBL
Match: A0A0S3SHK8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G102200 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 2.1e-99
Identity = 179/196 (91.33%), Postives = 189/196 (96.43%), Query Frame = 1


Query: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPSDYVPTVFDNFSANVVVDGSTVSLGLWD 60
           MSTARFIKCVTVGDGAVGKTCMLISYTSNTFP+DYVPTVFDNFSANVVVDGST++LGLWD
Sbjct: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTINLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSL+S+ASYENISKKWIPELRHYAPTVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLLSRASYENISKKWIPELRHYAPTVPIVLVGTKL 120

Query: 121 DLRDDKQYLSSHPGAVPITTVQGEELKKSIGAAVYIECSSKTQQNVKTVFDAAIKVVLQP 180
           DLR+D+QYL  HPGA PITTVQGEELKK+IGAAVYIECSSKTQQNVK VFDAAIKVVLQP
Sbjct: 121 DLREDRQYLIDHPGATPITTVQGEELKKAIGAAVYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKPKRKRRKATKCVFL 197
           PKPK+KR+K   CVFL
Sbjct: 181 PKPKKKRKKNRSCVFL 196

[Close]

BLAST of CmoCh02G001960 vs. TrEMBL
Match: A0A067DRZ6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029177mg PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 2.1e-99
Identity = 180/196 (91.84%), Postives = 189/196 (96.43%), Query Frame = 1


Query: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPSDYVPTVFDNFSANVVVDGSTVSLGLWD 60
           M+TARFIKCVTVGDGAVGKTCMLISYTSNTFP+DYVPTVFDNFSANVVVDGSTV+LGLWD
Sbjct: 2   MNTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 61

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTK 
Sbjct: 62  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKQ 121

Query: 121 DLRDDKQYLSSHPGAVPITTVQGEELKKSIGAAVYIECSSKTQQNVKTVFDAAIKVVLQP 180
           DLR+DKQYL +HPGA PITT QGEELKK IGAAVYIECSSKTQQNVKTVFDAAIKVVLQP
Sbjct: 122 DLREDKQYLINHPGATPITTAQGEELKKLIGAAVYIECSSKTQQNVKTVFDAAIKVVLQP 181

Query: 181 PKPKRKRRKATKCVFL 197
           PKPK+++RKA  C+FL
Sbjct: 182 PKPKKRKRKARPCIFL 197

[Close]

BLAST of CmoCh02G001960 vs. TrEMBL
Match: V4U253_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016797mg PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 2.1e-99
Identity = 180/196 (91.84%), Postives = 189/196 (96.43%), Query Frame = 1


Query: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPSDYVPTVFDNFSANVVVDGSTVSLGLWD 60
           M+TARFIKCVTVGDGAVGKTCMLISYTSNTFP+DYVPTVFDNFSANVVVDGSTV+LGLWD
Sbjct: 2   MNTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 61

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTK 
Sbjct: 62  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKQ 121

Query: 121 DLRDDKQYLSSHPGAVPITTVQGEELKKSIGAAVYIECSSKTQQNVKTVFDAAIKVVLQP 180
           DLR+DKQYL +HPGA PITT QGEELKK IGAAVYIECSSKTQQNVKTVFDAAIKVVLQP
Sbjct: 122 DLREDKQYLINHPGATPITTAQGEELKKLIGAAVYIECSSKTQQNVKTVFDAAIKVVLQP 181

Query: 181 PKPKRKRRKATKCVFL 197
           PKPK+++RKA  C+FL
Sbjct: 182 PKPKKRKRKARPCIFL 197

[Close]

BLAST of CmoCh02G001960 vs. TrEMBL
Match: E0CTM2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g02630 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 3.6e-99
Identity = 180/196 (91.84%), Postives = 188/196 (95.92%), Query Frame = 1


Query: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPSDYVPTVFDNFSANVVVDGSTVSLGLWD 60
           MSTARFIKCVTVGDGAVGKTCMLISYTSNTFP+DYVPTVFDNFSANVVVDGSTV+LGLWD
Sbjct: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL 120

Query: 121 DLRDDKQYLSSHPGAVPITTVQGEELKKSIGAAVYIECSSKTQQNVKTVFDAAIKVVLQP 180
           DLR+DKQ+L  HPGA PITT QGE+LKK IGAAVYIECSSKTQQNVK VFDAAIKVVLQP
Sbjct: 121 DLREDKQFLIDHPGATPITTAQGEDLKKMIGAAVYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKPKRKRRKATKCVFL 197
           PKPK++RRK+  CVFL
Sbjct: 181 PKPKKRRRKSRPCVFL 196

[Close]

BLAST of CmoCh02G001960 vs. TAIR10
Match: AT1G75840.1 (AT1G75840.1 RAC-like GTP binding protein 5)

HSP 1 Score: 351.7 bits (901), Expect = 3.0e-97
Identity = 168/196 (85.71%), Postives = 183/196 (93.37%), Query Frame = 1


Query: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPSDYVPTVFDNFSANVVVDGSTVSLGLWD 60
           MS +RFIKCVTVGDGAVGKTCMLISYTSNTFP+DYVPTVFDNFSANVVVDG+TV+LGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYEN++KKWIPELRHYAP VPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120

Query: 121 DLRDDKQYLSSHPGAVPITTVQGEELKKSIGAAVYIECSSKTQQNVKTVFDAAIKVVLQP 180
           DLRDDKQ+   HPGAVPITT QGEELKK IG+ +YIECSSKTQQNVK VFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKPKRKRRKATKCVFL 197
           PK K+K++   +CVFL
Sbjct: 181 PKQKKKKKNKNRCVFL 196

[Close]

BLAST of CmoCh02G001960 vs. TAIR10
Match: AT1G20090.1 (AT1G20090.1 RHO-related protein from plants 2)

HSP 1 Score: 349.4 bits (895), Expect = 1.5e-96
Identity = 168/193 (87.05%), Postives = 181/193 (93.78%), Query Frame = 1


Query: 4   ARFIKCVTVGDGAVGKTCMLISYTSNTFPSDYVPTVFDNFSANVVVDGSTVSLGLWDTAG 63
           +RFIKCVTVGDGAVGKTCMLISYTSNTFP+DYVPTVFDNFSANVVVDG+TV+LGLWDTAG
Sbjct: 3   SRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAG 62

Query: 64  QEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKLDLR 123
           QEDYNRLRPLSYRGADVF+LAFSLISKASYENI+KKWIPELRHYAP VPI+LVGTKLDLR
Sbjct: 63  QEDYNRLRPLSYRGADVFILAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKLDLR 122

Query: 124 DDKQYLSSHPGAVPITTVQGEELKKSIGAAVYIECSSKTQQNVKTVFDAAIKVVLQPPKP 183
           DDKQ+   HPGAVPITT QGEELKK IG+AVYIECSSKTQQNVK VFDAAIKVVLQPPK 
Sbjct: 123 DDKQFFIDHPGAVPITTNQGEELKKLIGSAVYIECSSKTQQNVKAVFDAAIKVVLQPPKQ 182

Query: 184 KRKRRKATKCVFL 197
           K+K++   +C FL
Sbjct: 183 KKKKKNKNRCAFL 195

[Close]

BLAST of CmoCh02G001960 vs. TAIR10
Match: AT3G51300.1 (AT3G51300.1 RHO-related protein from plants 1)

HSP 1 Score: 342.4 bits (877), Expect = 1.8e-94
Identity = 164/192 (85.42%), Postives = 179/192 (93.23%), Query Frame = 1


Query: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPSDYVPTVFDNFSANVVVDGSTVSLGLWD 60
           MS +RF+KCVTVGDGAVGKTC+LISYTSNTFP+DYVPTVFDNFSANVVV+GSTV+LGLWD
Sbjct: 1   MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYEN+SKKWIPEL+HYAP VPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQYLSSHPGAVPITTVQGEELKKSIGAAVYIECSSKTQQNVKTVFDAAIKVVLQP 180
           DLRDDKQ+   HPGAVPITT QGEEL+K IGA  YIECSSKTQ+NVK VFDAAI+VVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVLQP 180

Query: 181 PKPKRKRRKATK 193
           PK K+K+ KA K
Sbjct: 181 PKQKKKKSKAQK 192

[Close]

BLAST of CmoCh02G001960 vs. TAIR10
Match: AT4G35020.1 (AT4G35020.1 RAC-like 3)

HSP 1 Score: 341.7 bits (875), Expect = 3.1e-94
Identity = 160/192 (83.33%), Postives = 181/192 (94.27%), Query Frame = 1


Query: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPSDYVPTVFDNFSANVVVDGSTVSLGLWD 60
           MS +RFIKCVTVGDGAVGKTC+LISYTSNTFP+DYVPTVFDNFSANV+VDG+T++LGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSL+SKASYEN+SKKW+PELRHYAP VPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120

Query: 121 DLRDDKQYLSSHPGAVPITTVQGEELKKSIGAAVYIECSSKTQQNVKTVFDAAIKVVLQP 180
           DLRDDKQ+ + HPGAVPI+T QGEELKK IGA  YIECS+KTQQNVK VFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKPKRKRRKATK 193
           PK K+K+++ ++
Sbjct: 181 PKNKKKKKRKSQ 192

[Close]

BLAST of CmoCh02G001960 vs. TAIR10
Match: AT4G35950.1 (AT4G35950.1 RAC-like 6)

HSP 1 Score: 341.7 bits (875), Expect = 3.1e-94
Identity = 165/192 (85.94%), Postives = 180/192 (93.75%), Query Frame = 1


Query: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPSDYVPTVFDNFSANVVVDGSTVSLGLWD 60
           MS +RFIKCVTVGDGAVGKTC+LISYTSNTFP+DYVPTVFDNFSANVVV+G+TV+LGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYEN+SKKWIPEL+HYAP VPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQYLSSHPGAVPITTVQGEELKKSIGAAVYIECSSKTQQNVKTVFDAAIKVVLQP 180
           DLRDDKQ+   HPGAVPITTVQGEELKK IGA  YIECSSK+Q+NVK VFDAAI+VVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVLQP 180

Query: 181 PKPKRKRRKATK 193
           PK K+K+ KA K
Sbjct: 181 PKQKKKKNKAQK 192

[Close]

BLAST of CmoCh02G001960 vs. NCBI nr
Match: gi|449468388|ref|XP_004151903.1| (PREDICTED: rac-like GTP-binding protein RAC2 [Cucumis sativus])

HSP 1 Score: 383.6 bits (984), Expect = 2.0e-103
Identity = 189/196 (96.43%), Postives = 193/196 (98.47%), Query Frame = 1


Query: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPSDYVPTVFDNFSANVVVDGSTVSLGLWD 60
           MSTARFIKCVTVGDGAVGKTCMLISYTSNTFP+DYVPTVFDNFSANVVVDGSTV+LGLWD
Sbjct: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL 120

Query: 121 DLRDDKQYLSSHPGAVPITTVQGEELKKSIGAAVYIECSSKTQQNVKTVFDAAIKVVLQP 180
           DLRDDKQ+L+SHPGAVPITT QGEELKKSIGAAVYIECSSKTQQNVK VFDAAIKVVLQP
Sbjct: 121 DLRDDKQFLTSHPGAVPITTAQGEELKKSIGAAVYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKPKRKRRKATKCVFL 197
           PKPKRKRRKA KCVFL
Sbjct: 181 PKPKRKRRKARKCVFL 196

[Close]

BLAST of CmoCh02G001960 vs. NCBI nr
Match: gi|659111845|ref|XP_008455937.1| (PREDICTED: rac-like GTP-binding protein RAC2 [Cucumis melo])

HSP 1 Score: 382.5 bits (981), Expect = 4.5e-103
Identity = 188/196 (95.92%), Postives = 193/196 (98.47%), Query Frame = 1


Query: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPSDYVPTVFDNFSANVVVDGSTVSLGLWD 60
           MSTARFIKCVTVGDGAVGKTCMLISYTSNTFP+DYVPTVFDNFSANV+VDGSTV+LGLWD
Sbjct: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVMVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL 120

Query: 121 DLRDDKQYLSSHPGAVPITTVQGEELKKSIGAAVYIECSSKTQQNVKTVFDAAIKVVLQP 180
           DLRDDKQ+L+SHPGAVPITT QGEELKKSIGAAVYIECSSKTQQNVK VFDAAIKVVLQP
Sbjct: 121 DLRDDKQFLTSHPGAVPITTAQGEELKKSIGAAVYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKPKRKRRKATKCVFL 197
           PKPKRKRRKA KCVFL
Sbjct: 181 PKPKRKRRKARKCVFL 196

[Close]

BLAST of CmoCh02G001960 vs. NCBI nr
Match: gi|470134601|ref|XP_004303136.1| (PREDICTED: rac-like GTP-binding protein RAC2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 373.6 bits (958), Expect = 2.1e-100
Identity = 183/196 (93.37%), Postives = 189/196 (96.43%), Query Frame = 1


Query: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPSDYVPTVFDNFSANVVVDGSTVSLGLWD 60
           MSTARFIKCVTVGDGAVGKTCMLISYTSNTFP+DYVPTVFDNFSANVVVDGSTV+LGLWD
Sbjct: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENI+KKWIPELRHYAPTVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIAKKWIPELRHYAPTVPIVLVGTKL 120

Query: 121 DLRDDKQYLSSHPGAVPITTVQGEELKKSIGAAVYIECSSKTQQNVKTVFDAAIKVVLQP 180
           DLRDDKQYL  HPGA PI+T QGEELKK+IGAAVYIECSSKTQQNVK VFDAAIKVVLQP
Sbjct: 121 DLRDDKQYLIDHPGATPISTAQGEELKKTIGAAVYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKPKRKRRKATKCVFL 197
           PKPKR+RRKA  CVFL
Sbjct: 181 PKPKRRRRKARPCVFL 196

[Close]

BLAST of CmoCh02G001960 vs. NCBI nr
Match: gi|951072425|ref|XP_014491700.1| (PREDICTED: rac-like GTP-binding protein RAC2 [Vigna radiata var. radiata])

HSP 1 Score: 369.8 bits (948), Expect = 3.0e-99
Identity = 179/196 (91.33%), Postives = 189/196 (96.43%), Query Frame = 1


Query: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPSDYVPTVFDNFSANVVVDGSTVSLGLWD 60
           MSTARFIKCVTVGDGAVGKTCMLISYTSNTFP+DYVPTVFDNFSANVVVDGST++LGLWD
Sbjct: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTINLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSL+S+ASYENISKKWIPELRHYAPTVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLLSRASYENISKKWIPELRHYAPTVPIVLVGTKL 120

Query: 121 DLRDDKQYLSSHPGAVPITTVQGEELKKSIGAAVYIECSSKTQQNVKTVFDAAIKVVLQP 180
           DLR+D+QYL  HPGA PITTVQGEELKK+IGAAVYIECSSKTQQNVK VFDAAIKVVLQP
Sbjct: 121 DLREDRQYLIDHPGATPITTVQGEELKKAIGAAVYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKPKRKRRKATKCVFL 197
           PKPK+KR+K   CVFL
Sbjct: 181 PKPKKKRKKNRSCVFL 196

[Close]

BLAST of CmoCh02G001960 vs. NCBI nr
Match: gi|567908847|ref|XP_006446737.1| (hypothetical protein CICLE_v10016797mg [Citrus clementina])

HSP 1 Score: 369.8 bits (948), Expect = 3.0e-99
Identity = 180/196 (91.84%), Postives = 189/196 (96.43%), Query Frame = 1


Query: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPSDYVPTVFDNFSANVVVDGSTVSLGLWD 60
           M+TARFIKCVTVGDGAVGKTCMLISYTSNTFP+DYVPTVFDNFSANVVVDGSTV+LGLWD
Sbjct: 2   MNTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 61

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTK 
Sbjct: 62  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKQ 121

Query: 121 DLRDDKQYLSSHPGAVPITTVQGEELKKSIGAAVYIECSSKTQQNVKTVFDAAIKVVLQP 180
           DLR+DKQYL +HPGA PITT QGEELKK IGAAVYIECSSKTQQNVKTVFDAAIKVVLQP
Sbjct: 122 DLREDKQYLINHPGATPITTAQGEELKKLIGAAVYIECSSKTQQNVKTVFDAAIKVVLQP 181

Query: 181 PKPKRKRRKATKCVFL 197
           PKPK+++RKA  C+FL
Sbjct: 182 PKPKKRKRKARPCIFL 197

The following BLAST results are available for this feature:

BLAST of CmoCh02G001960 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAC2_LOTJA	5.5e-101	90.82	Rac-like GTP-binding protein RAC2 OS=Lotus japonicus GN=RAC2 PE=2 SV=1	[more]
RAC5_ARATH	5.3e-96	85.71	Rac-like GTP-binding protein ARAC5 OS=Arabidopsis thaliana GN=ARAC5 PE=1 SV=1	[more]
RAC5_ORYSJ	9.0e-96	86.80	Rac-like GTP-binding protein 5 OS=Oryza sativa subsp. japonica GN=RAC5 PE=2 SV=2	[more]
RAC13_GOSHI	2.6e-95	87.76	Rac-like GTP-binding protein RAC13 OS=Gossypium hirsutum GN=RAC13 PE=2 SV=1	[more]
RAC4_ARATH	2.6e-95	87.05	Rac-like GTP-binding protein ARAC4 OS=Arabidopsis thaliana GN=ARAC4 PE=1 SV=1	[more]

BLAST of CmoCh02G001960 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQB2_CUCSA	1.4e-103	96.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G415560 PE=4 SV=1	[more]
A0A0S3SHK8_PHAAN	2.1e-99	91.33	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G102200 PE=...	[more]
A0A067DRZ6_CITSI	2.1e-99	91.84	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029177mg PE=4 SV=1	[more]
V4U253_9ROSI	2.1e-99	91.84	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016797mg PE=4 SV=1	[more]
E0CTM2_VITVI	3.6e-99	91.84	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g02630 PE=4 SV=...	[more]

BLAST of CmoCh02G001960 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G75840.1	3.0e-97	85.71	RAC-like GTP binding protein 5	[more]
AT1G20090.1	1.5e-96	87.05	RHO-related protein from plants 2	[more]
AT3G51300.1	1.8e-94	85.42	RHO-related protein from plants 1	[more]
AT4G35020.1	3.1e-94	83.33	RAC-like 3	[more]
AT4G35950.1	3.1e-94	85.94	RAC-like 6	[more]

BLAST of CmoCh02G001960 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449468388\|ref\|XP_004151903.1\|	2.0e-103	96.43	PREDICTED: rac-like GTP-binding protein RAC2 [Cucumis sativus]	[more]
gi\|659111845\|ref\|XP_008455937.1\|	4.5e-103	95.92	PREDICTED: rac-like GTP-binding protein RAC2 [Cucumis melo]	[more]
gi\|470134601\|ref\|XP_004303136.1\|	2.1e-100	93.37	PREDICTED: rac-like GTP-binding protein RAC2 [Fragaria vesca subsp. vesca]	[more]
gi\|951072425\|ref\|XP_014491700.1\|	3.0e-99	91.33	PREDICTED: rac-like GTP-binding protein RAC2 [Vigna radiata var. radiata]	[more]
gi\|567908847\|ref\|XP_006446737.1\|	3.0e-99	91.84	hypothetical protein CICLE_v10016797mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006687	glycosphingolipid metabolic process
biological_process	GO:0015031	protein transport
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0007015	actin filament organization
biological_process	GO:0010413	glucuronoxylan metabolic process
biological_process	GO:0009832	plant-type cell wall biogenesis
biological_process	GO:0045492	xylan biosynthetic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005622	intracellular
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0004767	sphingomyelin phosphodiesterase activity
molecular_function	GO:0003924	GTPase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G001960.1	CmoCh02G001960.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 8..178 score: 3.0
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 7..171 score: 6.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 7..183 score: 3.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 6..178 score: 3.55
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 155..177 score: 1.2E-37coord: 109..122 score: 1.2E-37coord: 7..28 score: 1.2E-37coord: 30..46 score: 1.2E-37coord: 47..69 score: 1.2
None	No IPR available	PANTHER	PTHR24072	RHO FAMILY GTPASE	coord: 1..189 score: 6.2E
None	No IPR available	PANTHER	PTHR24072:SF167	RAC-LIKE GTP-BINDING PROTEIN ARAC2	coord: 1..189 score: 6.2E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 4..180 score: 5.2
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 9..180 score: 3.2E
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 7..180 score: 5.1
None	No IPR available	PROFILE	PS51420	RHO	coord: 1..177 score: 25

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh02G001960	Cucsa.309440	Cucumber (Gy14) v1	cgycmoB0851
CmoCh02G001960	Cucsa.046650	Cucumber (Gy14) v1	cgycmoB0039
CmoCh02G001960	CmaCh20G005840	Cucurbita maxima (Rimu)	cmacmoB561
CmoCh02G001960	CmaCh02G001900	Cucurbita maxima (Rimu)	cmacmoB619
CmoCh02G001960	Csa2G415560	Cucumber (Chinese Long) v2	cmocuB578
CmoCh02G001960	MELO3C019315	Melon (DHL92) v3.5.1	cmomeB523
CmoCh02G001960	ClCG02G010120	Watermelon (Charleston Gray)	cmowcgB534
CmoCh02G001960	CSPI06G35060	Wild cucumber (PI 183967)	cmocpiB638
CmoCh02G001960	CSPI02G26070	Wild cucumber (PI 183967)	cmocpiB583
CmoCh02G001960	Cp4.1LG16g04200	Cucurbita pepo (Zucchini)	cmocpeB577
CmoCh02G001960	MELO3C019315.2	Melon (DHL92) v3.6.1	cmomedB601
CmoCh02G001960	CsaV3_6G050550	Cucumber (Chinese Long) v3	cmocucB0752
CmoCh02G001960	CsaV3_2G034580	Cucumber (Chinese Long) v3	cmocucB0688
CmoCh02G001960	Cla97C02G036250	Watermelon (97103) v2	cmowmbB596
CmoCh02G001960	Bhi10G001074	Wax gourd	cmowgoB0748
CmoCh02G001960	CsGy2G025670	Cucumber (Gy14) v2	cgybcmoB221
CmoCh02G001960	Carg05118	Silver-seed gourd	carcmoB1094
CmoCh02G001960	Carg03112	Silver-seed gourd	carcmoB0468

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh02G001960	CmoCh20G006500	Cucurbita moschata (Rifu)	cmocmoB406
CmoCh02G001960	CmoCh03G013020	Cucurbita moschata (Rifu)	cmocmoB432

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh02G001960	Watermelon (97103) v2	cmowmbB604
CmoCh02G001960	Wax gourd	cmowgoB0757
CmoCh02G001960	Cucurbita moschata (Rifu)	cmocmoB121
CmoCh02G001960	Cucurbita maxima (Rimu)	cmacmoB154
CmoCh02G001960	Cucurbita maxima (Rimu)	cmacmoB524
CmoCh02G001960	Cucumber (Chinese Long) v2	cmocuB632
CmoCh02G001960	Watermelon (Charleston Gray)	cmowcgB529
CmoCh02G001960	Cucurbita pepo (Zucchini)	cmocpeB595
CmoCh02G001960	Bottle gourd (USVL1VR-Ls)	cmolsiB534