CmoCh01G020070 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACACTCGCAAAAGAAGTCGATTTGGTGAATGTGGGCAACAGTGCTTTAGTTAAGCGGTATGGCGTTGTTGATTTTGCAATGCAAGTGGGGGGACAGAACAAAAGTAGGATTCAAGCCATCCCATCTGTACTGCACGTTGGTTGGGTTGGGTTGGGTTCGTGGGGTTTCTTCAAGAAAAAGAAGAACGTCCTATATATGGGCTTTCAAACAGTACAACCAATTGCAAGAAATGGGTTTGGAAAATGGAATGATGTTCTGTTGTTTGTTAGTTTTTTTTGGAGTAGCGGTTTATGGGTCGAGAGCTGAGGGTTTGAAAAATGGCACTTTCTTAACATTCTCCGAGCTGCCAGGGGGAAATGCAGGGGAGGGGAGAAACAGTTCTGGTAATACTACTACGGTTGAGGTTAGCAAGCAGAACAGGGGAGGAGGCGGTGGGTATGGGTGGGGATGGGGCGGAGGCGGTGGAGGTGGAGGTGGAGGGGGTGGAGGAGGTGGTGGTGGTGGTGGATGGGGATGGGGAGGAGGGGGAGGTGGGTGGTGGAAATGGGGTTGTGGTGGACAGCCAAAATCTGGCAGACGCGGCGGTGGGAGAAGGAAAAATGTAGACAGGAAGAGAATATACAATGAGGAAGATTACAGTTTGGGAGAATTTGCGGAATGTATGGTGAAAGGAAGATGCAGAGGCATGAGATTGGACTGTCCGCTTCACTGCGGCGGGCCTTGCTTTTACGACTGTCGACACATGTGCAAGGCTCACTGCCGACGCCTGTAA ATGACACTCGCAAAAGAAGTCGATTTGGTGAATGTGGGCAACAGTGCTTTAGTTAAGCGGTATGGCGTTGTTGATTTTGCAATGCAAGTGGGGGGACAGAACAAAACGGTTTATGGGTCGAGAGCTGAGGGTTTGAAAAATGGCACTTTCTTAACATTCTCCGAGCTGCCAGGGGGAAATGCAGGGGAGGGGAGAAACAGTTCTGGTAATACTACTACGGTTGAGGTTAGCAAGCAGAACAGGGGAGGAGGCGGTGGGTATGGGTGGGGATGGGGCGGAGGCGGTGGAGGTGGAGGTGGAGGGGGTGGAGGAGGTGGTGGTGGTGGTGGATGGGGATGGGGAGGAGGGGGAGGTGGGTGGTGGAAATGGGGTTGTGGTGGACAGCCAAAATCTGGCAGACGCGGCGGTGGGAGAAGGAAAAATGTAGACAGGAAGAGAATATACAATGAGGAAGATTACAGTTTGGGAGAATTTGCGGAATGTATGGTGAAAGGAAGATGCAGAGGCATGAGATTGGACTGTCCGCTTCACTGCGGCGGGCCTTGCTTTTACGACTGTCGACACATGTGCAAGGCTCACTGCCGACGCCTGTAA ATGACACTCGCAAAAGAAGTCGATTTGGTGAATGTGGGCAACAGTGCTTTAGTTAAGCGGTATGGCGTTGTTGATTTTGCAATGCAAGTGGGGGGACAGAACAAAACGGTTTATGGGTCGAGAGCTGAGGGTTTGAAAAATGGCACTTTCTTAACATTCTCCGAGCTGCCAGGGGGAAATGCAGGGGAGGGGAGAAACAGTTCTGGTAATACTACTACGGTTGAGGTTAGCAAGCAGAACAGGGGAGGAGGCGGTGGGTATGGGTGGGGATGGGGCGGAGGCGGTGGAGGTGGAGGTGGAGGGGGTGGAGGAGGTGGTGGTGGTGGTGGATGGGGATGGGGAGGAGGGGGAGGTGGGTGGTGGAAATGGGGTTGTGGTGGACAGCCAAAATCTGGCAGACGCGGCGGTGGGAGAAGGAAAAATGTAGACAGGAAGAGAATATACAATGAGGAAGATTACAGTTTGGGAGAATTTGCGGAATGTATGGTGAAAGGAAGATGCAGAGGCATGAGATTGGACTGTCCGCTTCACTGCGGCGGGCCTTGCTTTTACGACTGTCGACACATGTGCAAGGCTCACTGCCGACGCCTGTAA
BLAST of CmoCh01G020070 vs. TrEMBL
Match: A0A0A0K766_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G056450 PE=4 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 2.3e-53 Identity = 134/172 (77.91%), Postives = 143/172 (83.14%), Query Frame = 1
BLAST of CmoCh01G020070 vs. TrEMBL
Match: A0A067KQT9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04511 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 3.5e-30 Identity = 97/159 (61.01%), Postives = 113/159 (71.07%), Query Frame = 1
BLAST of CmoCh01G020070 vs. TrEMBL
Match: G7J4N5_MEDTR (Putative GRP family OS=Medicago truncatula GN=MTR_3g113080 PE=4 SV=2) HSP 1 Score: 136.7 bits (343), Expect = 3.0e-29 Identity = 100/170 (58.82%), Postives = 113/170 (66.47%), Query Frame = 1
BLAST of CmoCh01G020070 vs. TrEMBL
Match: A0A0D2QJC8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G196900 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 8.7e-29 Identity = 98/176 (55.68%), Postives = 116/176 (65.91%), Query Frame = 1
BLAST of CmoCh01G020070 vs. TrEMBL
Match: A0A067H1H4_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g038433mg PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 1.5e-28 Identity = 90/139 (64.75%), Postives = 99/139 (71.22%), Query Frame = 1
BLAST of CmoCh01G020070 vs. TAIR10
Match: AT1G75550.1 (AT1G75550.1 glycine-rich protein) HSP 1 Score: 94.4 bits (233), Expect = 8.6e-20 Identity = 78/146 (53.42%), Postives = 92/146 (63.01%), Query Frame = 1
BLAST of CmoCh01G020070 vs. NCBI nr
Match: gi|659110503|ref|XP_008455258.1| (PREDICTED: keratin, type II cytoskeletal 1 [Cucumis melo]) HSP 1 Score: 221.5 bits (563), Expect = 1.3e-54 Identity = 139/176 (78.98%), Postives = 148/176 (84.09%), Query Frame = 1
BLAST of CmoCh01G020070 vs. NCBI nr
Match: gi|778730147|ref|XP_011659711.1| (PREDICTED: keratin, type II cytoskeletal 2 epidermal [Cucumis sativus]) HSP 1 Score: 216.9 bits (551), Expect = 3.3e-53 Identity = 134/172 (77.91%), Postives = 143/172 (83.14%), Query Frame = 1
BLAST of CmoCh01G020070 vs. NCBI nr
Match: gi|1009135066|ref|XP_015884786.1| (PREDICTED: putative glycine-rich cell wall structural protein 1 [Ziziphus jujuba]) HSP 1 Score: 152.5 bits (384), Expect = 7.6e-34 Identity = 100/172 (58.14%), Postives = 120/172 (69.77%), Query Frame = 1
BLAST of CmoCh01G020070 vs. NCBI nr
Match: gi|694317112|ref|XP_009336768.1| (PREDICTED: putative glycine-rich cell wall structural protein 1 [Pyrus x bretschneideri]) HSP 1 Score: 142.1 bits (357), Expect = 1.0e-30 Identity = 98/148 (66.22%), Postives = 107/148 (72.30%), Query Frame = 1
BLAST of CmoCh01G020070 vs. NCBI nr
Match: gi|802596021|ref|XP_012072016.1| (PREDICTED: eggshell protein 2A [Jatropha curcas]) HSP 1 Score: 141.4 bits (355), Expect = 1.7e-30 Identity = 100/163 (61.35%), Postives = 117/163 (71.78%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |