CmoCh01G018300 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATCCTCTCCTCCAACTAAAACTGAATTGTCTTTGTAATTATTATATGTTCTTCCATTCTCTACTTGCATTTCAACCTTTCTTCTTCATAGCATCCATGACACCAAGATCACCATTGAGACAGCTTCTGCAAGAGCAACAGGAGCCTTTCGAGTTGGAGGAGTACCTTTTCGAGAGAGACTACTCGAGAAAGAGCTTTAGTAGGGGCAGTGGCAGTGGCTTTGCTTGCAGCAGTGGAAAATTTGACAATATTATGAAGTTTGGAAAGGGATTTGTAGAGATAAATAAGGTGCTGAGGAATACCTGTAAGAAGCTTGTTTCCATCAATAGGAAGCAGCAAACTAAGGATTTCGGAAAAAGTGGATGGATTCTTAGTGTTGGCTGCAAGAGAGTTGCAGAATCAGAGAACTTTTGGTCTCCCTGCAGCTCCCGGAAGAAGTCCAGTTCATTTTCTAGAAAAGATAACAAAAAGACATCATCTTCGAAGAGAAGACATCATGCTACTTCATCAACTTCAGACACTTTTGAAGCTCCAGAGCCCTGCAACTTACAAATACGTAAGGTATGATCATCCCGAACACTTAATTCATCATAATTTATCAGAACTACAAGGCATACCTGAATCATATGTAGTCTTTAAAGCAGACTCGGCATGTCCCATTTATAATCTATCATCAATTTAAACTTCAAAATGTGAAATACCATAGTCTTACAACTTTCTGTAAACTTGATGAACTAACGACACCAAACAGGGTGCGGCAGGAAAAAAGGTCGTGTCTAGAAGCATGAAATCAAGTAAGCAACTCAGCCCTGGATTAGACAATCATTTTCATCTTCCATGTCCATGAAGTTACCACCTTATATACAGAGAGTCTCTAATGTATAAAATAAAAGCAACTGTAGCTGAATGATCTGAACTTGTTTAGGACATGAAAACAGGGAAGCAGGGTCTGATTTGATAATTCCAGCAAGGCTAAACAATAATCAATTACGGAATGGCATTCCTCTACAGAAGAAAGTTCCAGACAACTCCATTCTCTCGGCCACTCTTTCGGAATTACTTCTTTACTCCGCAGCAATGGAGAAACCGAGTGGTATTGAGACTGCAGAACTGCAGGAACTTGTAACATCCAACACTACATCTCAGCTCCTGATATTCAAAAGGGTAATTCATCAAACAAAGCAGCTTCTTTTTTACTGTGTGGGGGAGGTGGTGGAGGCCCATTCCAAGCATGGCAGGCACATAGATTCTGAAGAAGCTAGGAGGCTCATCCATGAGAAGGAAACCACTGGGAAAAAAGCAAACTTATCAAATTCACTGAACTCAGATTACTTGCTCTCAGCAGCAGAATGGTGGGATTTGAAGCCGCAGAAGCAGCTTATAGGAGCAGAGATTGGAGCACTCATTCTAGAGGAGATTATTAATGAGGTTGTTACTGAACTAATTGATAAGCAGTGATCAACATTCTTCTGGCTTCAATTATACTAAGATTCCAATACAAGTATTTGCAGAAAAATGCACATTGTTAAGTATAAACCGTATATTCATATCCTAGAAGCTTCACTCAAACATCTGGACCCTGCCTCAGTGGAATGTACACTGTAGTATGAAAGCAGATATCAATCACCAATCTTAAATGAATTTGGATCGCTCGTATCATTTCATAAACCAAGTGATTTTCATGAAAGTCTCCCTTAAATACAACAGAACCACCAACTCAGATATTAAAACATATCAAATAGAAGACATACACGACCTGAGATGTC AATCCTCTCCTCCAACTAAAACTGAATTGTCTTTGTAATTATTATATGTTCTTCCATTCTCTACTTGCATTTCAACCTTTCTTCTTCATAGCATCCATGACACCAAGATCACCATTGAGACAGCTTCTGCAAGAGCAACAGGAGCCTTTCGAGTTGGAGGAGTACCTTTTCGAGAGAGACTACTCGAGAAAGAGCTTTAGTAGGGGCAGTGGCAGTGGCTTTGCTTGCAGCAGTGGAAAATTTGACAATATTATGAAGTTTGGAAAGGGATTTGTAGAGATAAATAAGGTGCTGAGGAATACCTGTAAGAAGCTTGTTTCCATCAATAGGAAGCAGCAAACTAAGGATTTCGGAAAAAGTGGATGGATTCTTAGTGTTGGCTGCAAGAGAGTTGCAGAATCAGAGAACTTTTGGTCTCCCTGCAGCTCCCGGAAGAAGTCCAGTTCATTTTCTAGAAAAGATAACAAAAAGACATCATCTTCGAAGAGAAGACATCATGCTACTTCATCAACTTCAGACACTTTTGAAGCTCCAGAGCCCTGCAACTTACAAATACGTAAGGGTGCGGCAGGAAAAAAGGTCGTGTCTAGAAGCATGAAATCAAGACATGAAAACAGGGAAGCAGGGTCTGATTTGATAATTCCAGCAAGGCTAAACAATAATCAATTACGGAATGGCATTCCTCTACAGAAGAAAGTTCCAGACAACTCCATTCTCTCGGCCACTCTTTCGGAATTACTTCTTTACTCCGCAGCAATGGAGAAACCGAGTGGTATTGAGACTGCAGAACTGCAGGAACTTGTAACATCCAACACTACATCTCAGCTCCTGATATTCAAAAGGGTAATTCATCAAACAAAGCAGCTTCTTTTTTACTGTGTGGGGGAGGTGGTGGAGGCCCATTCCAAGCATGGCAGGCACATAGATTCTGAAGAAGCTAGGAGGCTCATCCATGAGAAGGAAACCACTGGGAAAAAAGCAAACTTATCAAATTCACTGAACTCAGATTACTTGCTCTCAGCAGCAGAATGGTGGGATTTGAAGCCGCAGAAGCAGCTTATAGGAGCAGAGATTGGAGCACTCATTCTAGAGGAGATTATTAATGAGGTTGTTACTGAACTAATTGATAAGCAGTGATCAACATTCTTCTGGCTTCAATTATACTAAGATTCCAATACAAGTATTTGCAGAAAAATGCACATTGTTAAGTATAAACCGTATATTCATATCCTAGAAGCTTCACTCAAACATCTGGACCCTGCCTCAGTGGAATGTACACTGTAGTATGAAAGCAGATATCAATCACCAATCTTAAATGAATTTGGATCGCTCGTATCATTTCATAAACCAAGTGATTTTCATGAAAGTCTCCCTTAAATACAACAGAACCACCAACTCAGATATTAAAACATATCAAATAGAAGACATACACGACCTGAGATGTC ATGTTCTTCCATTCTCTACTTGCATTTCAACCTTTCTTCTTCATAGCATCCATGACACCAAGATCACCATTGAGACAGCTTCTGCAAGAGCAACAGGAGCCTTTCGAGTTGGAGGAGTACCTTTTCGAGAGAGACTACTCGAGAAAGAGCTTTAGTAGGGGCAGTGGCAGTGGCTTTGCTTGCAGCAGTGGAAAATTTGACAATATTATGAAGTTTGGAAAGGGATTTGTAGAGATAAATAAGGTGCTGAGGAATACCTGTAAGAAGCTTGTTTCCATCAATAGGAAGCAGCAAACTAAGGATTTCGGAAAAAGTGGATGGATTCTTAGTGTTGGCTGCAAGAGAGTTGCAGAATCAGAGAACTTTTGGTCTCCCTGCAGCTCCCGGAAGAAGTCCAGTTCATTTTCTAGAAAAGATAACAAAAAGACATCATCTTCGAAGAGAAGACATCATGCTACTTCATCAACTTCAGACACTTTTGAAGCTCCAGAGCCCTGCAACTTACAAATACGTAAGGGTGCGGCAGGAAAAAAGGTCGTGTCTAGAAGCATGAAATCAAGACATGAAAACAGGGAAGCAGGGTCTGATTTGATAATTCCAGCAAGGCTAAACAATAATCAATTACGGAATGGCATTCCTCTACAGAAGAAAGTTCCAGACAACTCCATTCTCTCGGCCACTCTTTCGGAATTACTTCTTTACTCCGCAGCAATGGAGAAACCGAGTGGTATTGAGACTGCAGAACTGCAGGAACTTGTAACATCCAACACTACATCTCAGCTCCTGATATTCAAAAGGGTAATTCATCAAACAAAGCAGCTTCTTTTTTACTGTGTGGGGGAGGTGGTGGAGGCCCATTCCAAGCATGGCAGGCACATAGATTCTGAAGAAGCTAGGAGGCTCATCCATGAGAAGGAAACCACTGGGAAAAAAGCAAACTTATCAAATTCACTGAACTCAGATTACTTGCTCTCAGCAGCAGAATGGTGGGATTTGAAGCCGCAGAAGCAGCTTATAGGAGCAGAGATTGGAGCACTCATTCTAGAGGAGATTATTAATGAGGTTGTTACTGAACTAATTGATAAGCAGTGA
BLAST of CmoCh01G018300 vs. TrEMBL
Match: A0A0A0L558_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G644680 PE=4 SV=1) HSP 1 Score: 461.8 bits (1187), Expect = 7.5e-127 Identity = 264/362 (72.93%), Postives = 289/362 (79.83%), Query Frame = 1
BLAST of CmoCh01G018300 vs. TrEMBL
Match: F6H178_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g08690 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 2.0e-31 Identity = 125/376 (33.24%), Postives = 196/376 (52.13%), Query Frame = 1
BLAST of CmoCh01G018300 vs. TrEMBL
Match: B9GNM2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s11630g PE=4 SV=2) HSP 1 Score: 115.9 bits (289), Expect = 1.0e-22 Identity = 129/419 (30.79%), Postives = 192/419 (45.82%), Query Frame = 1
BLAST of CmoCh01G018300 vs. TrEMBL
Match: A0A067KZH5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15994 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 7.2e-21 Identity = 121/386 (31.35%), Postives = 189/386 (48.96%), Query Frame = 1
BLAST of CmoCh01G018300 vs. TrEMBL
Match: W9S4B9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_000730 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 4.8e-17 Identity = 106/372 (28.49%), Postives = 181/372 (48.66%), Query Frame = 1
BLAST of CmoCh01G018300 vs. NCBI nr
Match: gi|659103661|ref|XP_008452675.1| (PREDICTED: uncharacterized protein LOC103493622 isoform X1 [Cucumis melo]) HSP 1 Score: 465.7 bits (1197), Expect = 7.4e-128 Identity = 264/362 (72.93%), Postives = 293/362 (80.94%), Query Frame = 1
BLAST of CmoCh01G018300 vs. NCBI nr
Match: gi|449447075|ref|XP_004141295.1| (PREDICTED: uncharacterized protein LOC101203076 isoform X1 [Cucumis sativus]) HSP 1 Score: 461.8 bits (1187), Expect = 1.1e-126 Identity = 264/362 (72.93%), Postives = 289/362 (79.83%), Query Frame = 1
BLAST of CmoCh01G018300 vs. NCBI nr
Match: gi|659103663|ref|XP_008452676.1| (PREDICTED: uncharacterized protein LOC103493622 isoform X2 [Cucumis melo]) HSP 1 Score: 448.0 bits (1151), Expect = 1.6e-122 Identity = 253/345 (73.33%), Postives = 281/345 (81.45%), Query Frame = 1
BLAST of CmoCh01G018300 vs. NCBI nr
Match: gi|449447077|ref|XP_004141296.1| (PREDICTED: uncharacterized protein LOC101203076 isoform X2 [Cucumis sativus]) HSP 1 Score: 444.1 bits (1141), Expect = 2.3e-121 Identity = 253/345 (73.33%), Postives = 277/345 (80.29%), Query Frame = 1
BLAST of CmoCh01G018300 vs. NCBI nr
Match: gi|731428904|ref|XP_010664486.1| (PREDICTED: uncharacterized protein LOC104882515 [Vitis vinifera]) HSP 1 Score: 144.8 bits (364), Expect = 2.9e-31 Identity = 125/376 (33.24%), Postives = 196/376 (52.13%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |