CmoCh01G018010 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G018010
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	NB-ARC domain containing protein, expressed
Location	Cmo_Chr01 : 13246474 .. 13247848 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTAGTCTTCCAACGGTCGTTTGTGTGAAAAGAGTGAAGCAAGAAGCTATGGAGGATTGGGACGAGACGATGCCATTACCGGGCGATGTAATTGAAGGTGTTGCTGAAGACAATGACGAGGAGCTGTTCGTTTCGACGAAGATCAAGGCTGACCTCAGTTCGCATCTTGCTAAGATCAGCCAGCAGTTTGAGGTTGTGTGGCTGAAGGTTAAGCGTGGAGATGCCACGCTTAAGCTTCGAGCACGTATCATACAAGAGAAGGCGTCGATTTTGCATAGGAAGTTCACTGTTGGAGCTGCAACCGACGATCGACATGTTGTGGTACTCGGTGATCTCACCTTTGACCAGTGCAATGAACTGCAGGGTGGGTTAGTACTCCATTGTTGTTCTGTAAGTGGCAGCTTGAAATGTAACAGAGTTTGATGTTGCAGAAATGAGTAGAAGAATATCAAACCCGGATGGTGCAGAATTCAACAGAAGAGGTGTGAAGTATGAATGGAGCAAAAAACTCGACCTGCATCTACCCGACCATCGTTCTTCGGTCATAAGCTCCATCCTGTTCGTGCCACTGCAGGGAGAGCACTCCATGGAGGCCACGACTAGCCGGTGTATGGCCTGGTTTTGTGCTGCAGTTTCTTCAGGAGCACCTCTTGTCTTTGTCAATATTCAATCAGAACAGATAGTTAATGTAGCTCAGGTAATACCCGTTCGCATGATCGTTGACAATCCCATCTGCAAATCGGATGTCGAAGCTCATTAGTTCGGTTTAAATTTTTGTTCTTATGAAGGACAAAACTCGAAAAACAGGAAAAGAATCATGGTGGAGCAAGCAACAAAACAACACTCCAAACCTGAAGGTTGTGCATGGGATAAGGCTATGGTTTCTTCCTGGAGTCTCAGAAGTTCCACTTGAAATGGTTCCTGCATCAGGAGAAGTTCGTTTCGGAATGGATATCCAACGAACCGACGAGGTATTTAAAGATCCATTTTACACGCCATATACGTATCGAGTTCAAAAACTTGGAGAACTGATGCCATTTTGATGCAACAGGGGTTCATCAGTGTCAGCGCGGTGACAAAAGGCTCCGCAGCGGACCGTTGTGGGCTTGGAAGCCTCTTGGAAGAAGCAAAGACAACCAACCATCTCTTGTTGATAGCTCGATTGGAAGGAAAGAGCGTAATCCCATCGAACGTAAGCTCTACCGGACTAATTCACTGCTGCGACCAAGCCGAGATAAGAAGCACTCTTGTATCTGCAATGGATAGAATGGACAGTGTGAGACTCCATATCATGGCTTTACCTGATGGGTCCGATGCTCAGGCAAATGAAACGTCTAATAAGCTTCGAACAACCCGAAAACTTTTCCCTTAA

mRNA sequence

ATGAGTAGTCTTCCAACGGTCGTTTGTGTGAAAAGAGTGAAGCAAGAAGCTATGGAGGATTGGGACGAGACGATGCCATTACCGGGCGATGTAATTGAAGGTGTTGCTGAAGACAATGACGAGGAGCTGTTCGTTTCGACGAAGATCAAGGCTGACCTCAGTTCGCATCTTGCTAAGATCAGCCAGCAGTTTGAGGTTGTGTGGCTGAAGGTTAAGCGTGGAGATGCCACGCTTAAGCTTCGAGCACGTATCATACAAGAGAAGGCGTCGATTTTGCATAGGAAGTTCACTGTTGGAGCTGCAACCGACGATCGACATGTTGTGGTACTCGGTGATCTCACCTTTGACCAGTGCAATGAACTGCAGGAAATGAGTAGAAGAATATCAAACCCGGATGGTGCAGAATTCAACAGAAGAGGTGTGAAGTATGAATGGAGCAAAAAACTCGACCTGCATCTACCCGACCATCGTTCTTCGGTCATAAGCTCCATCCTGTTCGTGCCACTGCAGGGAGAGCACTCCATGGAGGCCACGACTAGCCGGTGTATGGCCTGGTTTTGTGCTGCAGTTTCTTCAGGAGCACCTCTTGTCTTTGTCAATATTCAATCAGAACAGATAGTTAATGTAGCTCAGGACAAAACTCGAAAAACAGGAAAAGAATCATGGTGGAGCAAGCAACAAAACAACACTCCAAACCTGAAGGTTGTGCATGGGATAAGGCTATGGTTTCTTCCTGGAGTCTCAGAAGTTCCACTTGAAATGGTTCCTGCATCAGGAGAAGTTCGTTTCGGAATGGATATCCAACGAACCGACGAGGGGTTCATCAGTGTCAGCGCGGTGACAAAAGGCTCCGCAGCGGACCGTTGTGGGCTTGGAAGCCTCTTGGAAGAAGCAAAGACAACCAACCATCTCTTGTTGATAGCTCGATTGGAAGGAAAGAGCGTAATCCCATCGAACGTAAGCTCTACCGGACTAATTCACTGCTGCGACCAAGCCGAGATAAGAAGCACTCTTGTATCTGCAATGGATAGAATGGACAGTGTGAGACTCCATATCATGGCTTTACCTGATGGGTCCGATGCTCAGGCAAATGAAACGTCTAATAAGCTTCGAACAACCCGAAAACTTTTCCCTTAA

Coding sequence (CDS)

ATGAGTAGTCTTCCAACGGTCGTTTGTGTGAAAAGAGTGAAGCAAGAAGCTATGGAGGATTGGGACGAGACGATGCCATTACCGGGCGATGTAATTGAAGGTGTTGCTGAAGACAATGACGAGGAGCTGTTCGTTTCGACGAAGATCAAGGCTGACCTCAGTTCGCATCTTGCTAAGATCAGCCAGCAGTTTGAGGTTGTGTGGCTGAAGGTTAAGCGTGGAGATGCCACGCTTAAGCTTCGAGCACGTATCATACAAGAGAAGGCGTCGATTTTGCATAGGAAGTTCACTGTTGGAGCTGCAACCGACGATCGACATGTTGTGGTACTCGGTGATCTCACCTTTGACCAGTGCAATGAACTGCAGGAAATGAGTAGAAGAATATCAAACCCGGATGGTGCAGAATTCAACAGAAGAGGTGTGAAGTATGAATGGAGCAAAAAACTCGACCTGCATCTACCCGACCATCGTTCTTCGGTCATAAGCTCCATCCTGTTCGTGCCACTGCAGGGAGAGCACTCCATGGAGGCCACGACTAGCCGGTGTATGGCCTGGTTTTGTGCTGCAGTTTCTTCAGGAGCACCTCTTGTCTTTGTCAATATTCAATCAGAACAGATAGTTAATGTAGCTCAGGACAAAACTCGAAAAACAGGAAAAGAATCATGGTGGAGCAAGCAACAAAACAACACTCCAAACCTGAAGGTTGTGCATGGGATAAGGCTATGGTTTCTTCCTGGAGTCTCAGAAGTTCCACTTGAAATGGTTCCTGCATCAGGAGAAGTTCGTTTCGGAATGGATATCCAACGAACCGACGAGGGGTTCATCAGTGTCAGCGCGGTGACAAAAGGCTCCGCAGCGGACCGTTGTGGGCTTGGAAGCCTCTTGGAAGAAGCAAAGACAACCAACCATCTCTTGTTGATAGCTCGATTGGAAGGAAAGAGCGTAATCCCATCGAACGTAAGCTCTACCGGACTAATTCACTGCTGCGACCAAGCCGAGATAAGAAGCACTCTTGTATCTGCAATGGATAGAATGGACAGTGTGAGACTCCATATCATGGCTTTACCTGATGGGTCCGATGCTCAGGCAAATGAAACGTCTAATAAGCTTCGAACAACCCGAAAACTTTTCCCTTAA

Homology

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BLAST of CmoCh01G018010 vs. TrEMBL
Match: A0A0A0L0T5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G646370 PE=4 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 2.2e-174
Identity = 311/361 (86.15%), Postives = 335/361 (92.80%), Query Frame = 1


Query: 18  MEDWDETMPLPGDVIEGVAEDNDEELFVSTKIKADLSSHLAKISQQFEVVWLKVKRGDAT 77
           MEDWDETMPLPGDVIEGVAE +++ELFVS K KADLSS L +I+QQFEVVWLKVKRGDAT
Sbjct: 1   MEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDAT 60

Query: 78  LKLRARIIQEKASILHRKFTVGAATDDRHVVVLGDLTFDQCNELQEMSRRISNPDGAEFN 137
           LKLRARIIQEKASIL RKFT+ AATDDRHV +LGDLT DQC+ELQEMSRRISN +G EFN
Sbjct: 61  LKLRARIIQEKASILQRKFTIRAATDDRHVAILGDLTLDQCSELQEMSRRISNLNGGEFN 120

Query: 138 RRGVKYEWSKKLDLHLPDHRSSVISSILFVPLQGEHSMEATTSRCMAWFCAAVSSGAPLV 197
           R+GVKYEWSKKLD +LPDHRSSVISSILF+PL+GEHSMEATTSRCMAWFCAAVSSGAPLV
Sbjct: 121 RKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLV 180

Query: 198 FVNIQSEQIVNVAQDKTRKTGKESWWSKQQNNTPNLKVVHGIRLWFLPGVSEVPLEMVPA 257
           FVNIQSEQIVNV Q K R T KESWWSKQQ NTP+L+VVHGIRLWFLPGVSEV LEM+PA
Sbjct: 181 FVNIQSEQIVNVTQKKNRNTRKESWWSKQQYNTPSLRVVHGIRLWFLPGVSEVGLEMIPA 240

Query: 258 SGEVRFGMDIQRTDEGFISVSAVTKGSAADRCGLGSLLEEAKTTNHLLLIARLEGKSVIP 317
            G+VRFGMDIQRT+EGFI VS+VTKGSAADRCGLGSLLEEA +TN+LLLI+RLEG+SVIP
Sbjct: 241 PGDVRFGMDIQRTEEGFICVSSVTKGSAADRCGLGSLLEEAMSTNYLLLISRLEGRSVIP 300

Query: 318 SNVSSTGLIHCCDQAEIRSTLVSAMDRMDSVRLHIMALPDGSDAQANETSNKLRTTRKLF 377
           SNVSSTGLIHCCDQAEIRSTLVSAMDRMDSVRLHIMALPD SDAQANETS KL+TTRK  
Sbjct: 301 SNVSSTGLIHCCDQAEIRSTLVSAMDRMDSVRLHIMALPDSSDAQANETS-KLQTTRKFL 360

Query: 378 P 379
           P
Sbjct: 361 P 360

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BLAST of CmoCh01G018010 vs. TrEMBL
Match: B9IKD1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s05490g PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 5.6e-133
Identity = 236/367 (64.31%), Postives = 299/367 (81.47%), Query Frame = 1


Query: 6   TVVCVKRVKQEAMEDWDETMPLPGDVIEGVAEDNDEELFVSTKIKADLSSHLAKISQQFE 65
           T+VCV+RVKQEA E+WDE+MPLPGD+IEG AE+N +ELFV  K K+DLSS L KIS Q E
Sbjct: 16  TLVCVRRVKQEASEEWDESMPLPGDIIEGFAENNADELFVPAKAKSDLSSQLGKISPQTE 75

Query: 66  VVWLKVKRGDATLKLRARIIQEKASILHRKFTVGAATDDRHVVVLGDLTFDQCNELQEMS 125
            VWLKV+RG+ TLKLRAR++ +K+++L R+FT+ AA DDRHV VLGDLT +QC ELQEMS
Sbjct: 76  TVWLKVRRGERTLKLRARVMPDKSAVLQRRFTIKAANDDRHVAVLGDLTLEQCTELQEMS 135

Query: 126 RRISNPDGAEFNRRGVKYEWSKKLDLHLPDHRSSVISSILFVPLQGEHSMEATTSRCMAW 185
           R++ N D   F++RGVKY+W  K+D +LPD RSSV+SSILF+PLQGEHS+EATT RCMAW
Sbjct: 136 RKVVNMDSWAFSKRGVKYDWKMKVDNYLPDQRSSVVSSILFMPLQGEHSIEATTGRCMAW 195

Query: 186 FCAAVSSGAPLVFVNIQSEQIVNVAQDKTRKTGKE-SWWSKQQNNTPNLKVVHGIRLWFL 245
           F AAVSSGAP+VFVNIQ+EQ +NV  +KT  TGKE SW  ++ NNTP ++++ GIRLWFL
Sbjct: 196 FSAAVSSGAPIVFVNIQTEQTLNV--EKTLCTGKELSWGGQKSNNTP-VQILQGIRLWFL 255

Query: 246 PGVSEVPLEMVPASGEVRFGMDIQRTDEGFISVSAVTKGSAADRCGLGSLLEEAKTTNHL 305
           PGV+E+ LEM+P  GE RFGMDI+R DEGFI V +VTKGSAA+R GLG L EEA    HL
Sbjct: 256 PGVAEILLEMIPEPGETRFGMDIKRIDEGFICVCSVTKGSAAERAGLGDLFEEANKVGHL 315

Query: 306 LLIARLEGKSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRMDSVRLHIMALPD---GSDA 365
           L+I+RLEGKS++PS+V S GLIHCCDQ E++ TL+S++D MDS+++H+MA P+    S+ 
Sbjct: 316 LVISRLEGKSLMPSSVCSMGLIHCCDQNEVKDTLISSIDEMDSIQIHLMAWPNQTHSSNT 375

Query: 366 QANETSN 369
           +AN  +N
Sbjct: 376 KANGVAN 379

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BLAST of CmoCh01G018010 vs. TrEMBL
Match: A0A061GJD4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_037357 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 7.5e-122
Identity = 221/357 (61.90%), Postives = 276/357 (77.31%), Query Frame = 1


Query: 1   MSSLPTVVCVKRVKQEAMEDWDETMPLPGDVIEGVAEDNDEELFVSTKIKADLSSHLAKI 60
           M S+ T+VCVKRVKQ+  E+WDE+MPLPGD+IEG AE + +ELF+  K +++LSS L KI
Sbjct: 13  MGSVQTLVCVKRVKQDEQEEWDESMPLPGDIIEGFAEKDVDELFLPAKARSELSSQLGKI 72

Query: 61  SQQFEVVWLKVKRGDATLKLRARIIQEKASILHRKFTVGAATDDRHVVVLGDLTFDQCNE 120
            Q+ E +W+KV+RGDAT KLR R++ EK S+L RK+T+ AA DDRHV VLGDLT ++C  
Sbjct: 73  GQKVETIWVKVRRGDATHKLRVRVVAEKGSMLQRKYTIRAARDDRHVAVLGDLTLEECTN 132

Query: 121 LQEMSRRISNPDGAEFNRRGVKYEWSKKLDLHLPDHRSSVISSILFVPLQGEHSMEATTS 180
           LQEMSRR+ N D   FNR+ VKY+W  K+  ++PD  S+VISSILF+P QGE S+EAT S
Sbjct: 133 LQEMSRRVLNVDFRGFNRKEVKYDWKTKVGTYMPDQGSTVISSILFLPFQGEFSIEATLS 192

Query: 181 RCMAWFCAAVSSGAPLVFVNIQSEQIVNVAQDKTRKTGKESWWSKQQNNTPNLKVVHGIR 240
           R MAWF AAVSSGAPLVFVNIQ+EQI  V  +KT  +GKE    KQQN+T  ++++ GIR
Sbjct: 193 RSMAWFTAAVSSGAPLVFVNIQTEQI--VTSEKTNPSGKEISRGKQQNHTTTVELLKGIR 252

Query: 241 LWFLPGVSEVPLEMVPASGEVRFGMDIQRTDEGFISVSAVTKGSAADRCGLGSLLEEAKT 300
           LWFLPGV EV LEM+P   E RFG+DI+RTDEGFI + +V  GSAADR GL  LLEEA  
Sbjct: 253 LWFLPGVDEVSLEMIPEPEEGRFGLDIKRTDEGFICIYSVINGSAADRAGLQQLLEEANA 312

Query: 301 TNHLLLIARLEGKSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRMDSVRLHIMALPD 358
             HL++I+RLEGKS++PS+VSS GLIHCCD  EIR TL  A++RMD V+LHIMA P+
Sbjct: 313 KKHLIVISRLEGKSLMPSSVSSAGLIHCCDHNEIRDTLALAIERMDIVQLHIMAWPN 367

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BLAST of CmoCh01G018010 vs. TrEMBL
Match: A0A0D2U9G3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G097400 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 9.2e-120
Identity = 217/363 (59.78%), Postives = 277/363 (76.31%), Query Frame = 1


Query: 2   SSLPTVVCVKRVKQEAMEDWDETMPLPGDVIEGVAE------DNDEELFVSTKIKADLSS 61
           ++ PT+VCVKRVKQ+  E+WDETMPLPGD+IEG AE      D+D+  FV+ K +++LSS
Sbjct: 5   AAAPTLVCVKRVKQDEAEEWDETMPLPGDIIEGFAEKDGDDDDDDDASFVAVKGRSELSS 64

Query: 62  HLAKISQQFEVVWLKVKRGDATLKLRARIIQEKASILHRKFTVGAATDDRHVVVLGDLTF 121
            L K+ Q+ E +W+KV+RGD T KLR R++ +K+ ILH+K+T+ AA DDRH+ VLGDLT 
Sbjct: 65  QLGKMVQKVETIWVKVRRGDRTHKLRVRVVADKSYILHKKYTIRAARDDRHIAVLGDLTL 124

Query: 122 DQCNELQEMSRRISNPDGAEFNRRGVKYEWSKKLDLHLPDHRSSVISSILFVPLQGEHSM 181
           ++C  LQEMSRRI N     FNR+ + Y+W +K+D +LPD  S+V++SILF+P QGE+ +
Sbjct: 125 EKCTTLQEMSRRIVNVAFRGFNRKELNYDWKRKVDTYLPDQASTVVASILFMPFQGEYYI 184

Query: 182 EATTSRCMAWFCAAVSSGAPLVFVNIQSEQIVNVAQDKTRKTGKE-SWWSKQQNNTPNLK 241
           EAT SRCMAWF AAVSSG PLVFVNIQ+EQI  V  DKT + GKE S   KQQN + +++
Sbjct: 185 EATISRCMAWFSAAVSSGVPLVFVNIQTEQI--VTSDKTNQNGKEISRGGKQQNTSTSVE 244

Query: 242 VVHGIRLWFLPGVSEVPLEMVPASGEVRFGMDIQRTDEGFISVSAVTKGSAADRCGLGSL 301
           +V GIRLWFLPGV +V LEM+P  GE RFG+DI+RTDEGFI V  VTKGSAADR GL  L
Sbjct: 245 LVQGIRLWFLPGVEQVLLEMIPEPGETRFGLDIKRTDEGFICVGEVTKGSAADRAGLQQL 304

Query: 302 LEEAKTTNHLLLIARLEGKSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRMDSVRLHIMA 358
           L+EA  T HLL+I+RLEGKSV+PS V S G IHCCD  EI+  L SAM+ +D ++LHIMA
Sbjct: 305 LDEANLTKHLLVISRLEGKSVMPSTVGSAGFIHCCDHNEIKDALASAMEGLDIIQLHIMA 364

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BLAST of CmoCh01G018010 vs. TrEMBL
Match: F8WLA6_CITUN (Putative uncharacterized protein ORF39 OS=Citrus unshiu GN=ORF39 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 5.1e-118
Identity = 213/353 (60.34%), Postives = 269/353 (76.20%), Query Frame = 1


Query: 1   MSSLPTVVCVKRVKQEAMEDWDETMPLPGDVIEGVAEDNDEELFVSTKIKADLSSHLAKI 60
           MSS+ T+VCVK+VKQEA E+WDE+MPLPGD+IEG+AE+ D E FV  K K++L   L KI
Sbjct: 1   MSSVRTLVCVKQVKQEAPEEWDESMPLPGDIIEGLAENGDHESFVQIKAKSELGMLLGKI 60

Query: 61  SQQFEVVWLKVKRGDATLKLRARIIQEKASILHRKFTVGAATDDRHVVVLGDLTFDQCNE 120
           SQQ E +WL+V+RGD  +KLR R + E+ S+L +K+T+ AA DDRHV V+GDLTF+QC E
Sbjct: 61  SQQVEALWLRVRRGDRIIKLRVRAVAERNSMLQKKYTIRAAKDDRHVAVIGDLTFEQCTE 120

Query: 121 LQEMSRRISNPDGAEFNRRGVKYEWSKKLDLHLPDHRSSVISSILFVPLQGEHSMEATTS 180
           LQEMSR++ N DG  F ++GVKY+W  K+D +LPD RS VISS+LF PLQGE+S+EATT+
Sbjct: 121 LQEMSRKVVNVDGRGFRKQGVKYDWKMKVDTYLPDQRSPVISSVLFPPLQGENSIEATTA 180

Query: 181 RCMAWFCAAVSSGAPLVFVNIQSEQIVNVAQDKTRKTGKESWWSKQQNNTPNLKVVHGIR 240
           RCMAWF AAVSSG PLVFVNIQ+EQI  V  ++   TG+E    KQQN T  +++V GIR
Sbjct: 181 RCMAWFSAAVSSGVPLVFVNIQTEQI--VTSERINFTGREICGGKQQNPTTTMQIVLGIR 240

Query: 241 LWFLPGVSEVPLEMVPASGEVRFGMDIQRTDEGFISVSAVTKGSAADRCGLGSLLEEAKT 300
           LWFLPGV+EV LEM P  GE RFGMDI+RT+EGF  V +VT+GS ADR G+  L EEA  
Sbjct: 241 LWFLPGVAEVLLEMTPELGEARFGMDIKRTEEGFFCVYSVTEGSPADRAGMRHLSEEANA 300

Query: 301 TNHLLLIARLEGKSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRMDSVRLHIM 354
             +LL+I+RLEGKSV+PS     G + CCD  EI+ TL SA+D M+ + +HIM
Sbjct: 301 NGYLLVISRLEGKSVMPSGAICDGHLDCCDHNEIKDTLTSAIDSMEGILVHIM 351

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BLAST of CmoCh01G018010 vs. TAIR10
Match: AT4G12070.1 (AT4G12070.1 unknown protein)

HSP 1 Score: 127.1 bits (318), Expect = 2.3e-29
Identity = 101/367 (27.52%), Postives = 160/367 (43.60%), Query Frame = 1


Query: 19  EDWDETMPLPGDVIEGVAEDND------EELFVSTKIKADLSSHLAKISQQFEVVWLKVK 78
           E+W   M   GD++E +   +       +  F   K       H +  +++  +V ++V+
Sbjct: 32  EEWSGDMLQTGDIVEEIRIGSGPGSAIFKAPFKGGKAWLQKVLHNSFRNKETSIV-VRVR 91

Query: 79  RGDATLKLRARIIQEKASILHRKFTVGAATDDRHVVVLGDLTFDQCNELQEM--SRRISN 138
           RG       +  I    S   R++ + +  D  + V   D T   C  LQE   SR +  
Sbjct: 92  RGSDDFSDLSACIVPNESAGKRQYMLRSIDDPNYTVGFSDRTESDCLGLQESRGSRMVEA 151

Query: 139 PDGAEFNRRGVKYEWSKKLDLHLPDHRSSVISSILFVPLQGEHS--------MEATTSRC 198
              A+     V Y W +++   LP   SS   SILF+P    +         +E T +R 
Sbjct: 152 LVKAKLQDGYVSYPWERRMQEALPISGSSNFLSILFLPKASAYGRTGSRYNDLEDTLARA 211

Query: 199 MAWFCAAVSSGAPLVFVNIQSEQIVNVAQDKTRKTGKESWWSKQQNNTPN---------- 258
            AW   + ++G P+VF+NIQ+E ++     +T      +      +N  N          
Sbjct: 212 NAWLSCSQANGVPIVFMNIQTESLLTKISGETASATVNTTSLSDLSNLANTSLYGFEDYH 271

Query: 259 ---LKVVHGIRLWFLPGVSEVPLEMVPASGEVRFGMDIQRTDEGFISVSAVT----KGSA 318
              + VV  +RLWF P   E PLE+     + + G  I RT+EGFI VS+VT    + + 
Sbjct: 272 GVDIGVVRAVRLWFAPLGVEFPLEIKLKDDDTKLGFSISRTEEGFIYVSSVTDHEDESAP 331

Query: 319 ADRCGLGSLLEEAKTTNHLLLIARLEGKSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRM 353
           A R GL SL  EA   +  L+++R+  + V+P  VSSTG I C D   +   L       
Sbjct: 332 AARSGLSSLYREAAKASRRLVVSRVGNQKVLPWMVSSTGAIRCYDTVSLSQKLSLHRHAK 391

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BLAST of CmoCh01G018010 vs. NCBI nr
Match: gi|778696704|ref|XP_011654193.1| (PREDICTED: uncharacterized protein LOC105435315 isoform X1 [Cucumis sativus])

HSP 1 Score: 645.2 bits (1663), Expect = 7.1e-182
Identity = 325/378 (85.98%), Postives = 350/378 (92.59%), Query Frame = 1


Query: 1   MSSLPTVVCVKRVKQEAMEDWDETMPLPGDVIEGVAEDNDEELFVSTKIKADLSSHLAKI 60
           MS L TVVCVK+VKQEAMEDWDETMPLPGDVIEGVAE +++ELFVS K KADLSS L +I
Sbjct: 1   MSYLQTVVCVKKVKQEAMEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRI 60

Query: 61  SQQFEVVWLKVKRGDATLKLRARIIQEKASILHRKFTVGAATDDRHVVVLGDLTFDQCNE 120
           +QQFEVVWLKVKRGDATLKLRARIIQEKASIL RKFT+ AATDDRHV +LGDLT DQC+E
Sbjct: 61  NQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAILGDLTLDQCSE 120

Query: 121 LQEMSRRISNPDGAEFNRRGVKYEWSKKLDLHLPDHRSSVISSILFVPLQGEHSMEATTS 180
           LQEMSRRISN +G EFNR+GVKYEWSKKLD +LPDHRSSVISSILF+PL+GEHSMEATTS
Sbjct: 121 LQEMSRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTS 180

Query: 181 RCMAWFCAAVSSGAPLVFVNIQSEQIVNVAQDKTRKTGKESWWSKQQNNTPNLKVVHGIR 240
           RCMAWFCAAVSSGAPLVFVNIQSEQIVNV Q K R T KESWWSKQQ NTP+L+VVHGIR
Sbjct: 181 RCMAWFCAAVSSGAPLVFVNIQSEQIVNVTQKKNRNTRKESWWSKQQYNTPSLRVVHGIR 240

Query: 241 LWFLPGVSEVPLEMVPASGEVRFGMDIQRTDEGFISVSAVTKGSAADRCGLGSLLEEAKT 300
           LWFLPGVSEV LEM+PA G+VRFGMDIQRT+EGFI VS+VTKGSAADRCGLGSLLEEA +
Sbjct: 241 LWFLPGVSEVGLEMIPAPGDVRFGMDIQRTEEGFICVSSVTKGSAADRCGLGSLLEEAMS 300

Query: 301 TNHLLLIARLEGKSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRMDSVRLHIMALPDGSD 360
           TN+LLLI+RLEG+SVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRMDSVRLHIMALPD SD
Sbjct: 301 TNYLLLISRLEGRSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRMDSVRLHIMALPDSSD 360

Query: 361 AQANETSNKLRTTRKLFP 379
           AQANETS KL+TTRK  P
Sbjct: 361 AQANETS-KLQTTRKFLP 377

[Close]

BLAST of CmoCh01G018010 vs. NCBI nr
Match: gi|778696708|ref|XP_011654194.1| (PREDICTED: uncharacterized protein LOC105435315 isoform X2 [Cucumis sativus])

HSP 1 Score: 636.7 bits (1641), Expect = 2.5e-179
Identity = 323/378 (85.45%), Postives = 348/378 (92.06%), Query Frame = 1


Query: 1   MSSLPTVVCVKRVKQEAMEDWDETMPLPGDVIEGVAEDNDEELFVSTKIKADLSSHLAKI 60
           MS L TVVCVK+VKQEAMEDWDETMPLPGDVIEGVAE +++ELFVS K KADLSS L +I
Sbjct: 1   MSYLQTVVCVKKVKQEAMEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRI 60

Query: 61  SQQFEVVWLKVKRGDATLKLRARIIQEKASILHRKFTVGAATDDRHVVVLGDLTFDQCNE 120
           +QQFEVVWLKVKRGDATLKLRARIIQEKASIL RKFT+ AATDDRHV +LGDLT DQC+E
Sbjct: 61  NQQFEVVWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAILGDLTLDQCSE 120

Query: 121 LQEMSRRISNPDGAEFNRRGVKYEWSKKLDLHLPDHRSSVISSILFVPLQGEHSMEATTS 180
           LQEMSRRISN +G EFNR+GVKYEWSKKLD +LPDHRSSVISSILF+PL+GEHSMEATTS
Sbjct: 121 LQEMSRRISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTS 180

Query: 181 RCMAWFCAAVSSGAPLVFVNIQSEQIVNVAQDKTRKTGKESWWSKQQNNTPNLKVVHGIR 240
           RCMAWFCAAVSSGAPLVFVNIQSEQIVN    K R T KESWWSKQQ NTP+L+VVHGIR
Sbjct: 181 RCMAWFCAAVSSGAPLVFVNIQSEQIVN---KKNRNTRKESWWSKQQYNTPSLRVVHGIR 240

Query: 241 LWFLPGVSEVPLEMVPASGEVRFGMDIQRTDEGFISVSAVTKGSAADRCGLGSLLEEAKT 300
           LWFLPGVSEV LEM+PA G+VRFGMDIQRT+EGFI VS+VTKGSAADRCGLGSLLEEA +
Sbjct: 241 LWFLPGVSEVGLEMIPAPGDVRFGMDIQRTEEGFICVSSVTKGSAADRCGLGSLLEEAMS 300

Query: 301 TNHLLLIARLEGKSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRMDSVRLHIMALPDGSD 360
           TN+LLLI+RLEG+SVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRMDSVRLHIMALPD SD
Sbjct: 301 TNYLLLISRLEGRSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRMDSVRLHIMALPDSSD 360

Query: 361 AQANETSNKLRTTRKLFP 379
           AQANETS KL+TTRK  P
Sbjct: 361 AQANETS-KLQTTRKFLP 374

[Close]

BLAST of CmoCh01G018010 vs. NCBI nr
Match: gi|659105351|ref|XP_008453075.1| (PREDICTED: uncharacterized protein LOC103493899 [Cucumis melo])

HSP 1 Score: 621.3 bits (1601), Expect = 1.1e-174
Identity = 310/360 (86.11%), Postives = 334/360 (92.78%), Query Frame = 1


Query: 13  VKQEAMEDWDETMPLPGDVIEGVAEDNDEELFVSTKIKADLSSHLAKISQQFEVVWLKVK 72
           +KQEAMEDWDETMPLPGDVIEGVAE +++ELFV  K KADLSS L +I+QQFEVVWLKVK
Sbjct: 38  LKQEAMEDWDETMPLPGDVIEGVAEGDNDELFVLAKAKADLSSQLGRINQQFEVVWLKVK 97

Query: 73  RGDATLKLRARIIQEKASILHRKFTVGAATDDRHVVVLGDLTFDQCNELQEMSRRISNPD 132
           RGDATLKLRARIIQEKASIL RKFT+ AATDDRHV VLGDLT DQC+ELQEMSRRISN +
Sbjct: 98  RGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAVLGDLTLDQCSELQEMSRRISNLN 157

Query: 133 GAEFNRRGVKYEWSKKLDLHLPDHRSSVISSILFVPLQGEHSMEATTSRCMAWFCAAVSS 192
           G EFNRRGVKYEWSKKLD +LPDHRSS+ISSILF+PL+GEHS+EATTSRCMAWFCAAVSS
Sbjct: 158 GGEFNRRGVKYEWSKKLDQNLPDHRSSIISSILFMPLKGEHSLEATTSRCMAWFCAAVSS 217

Query: 193 GAPLVFVNIQSEQIVNVAQDKTRKTGKESWWSKQQNNTPNLKVVHGIRLWFLPGVSEVPL 252
           GAPLVFVNIQSEQIVNV Q K R TGKESWWSKQQNNTPNL+VVHGIRLWFLPGVSEV L
Sbjct: 218 GAPLVFVNIQSEQIVNVTQKKNRNTGKESWWSKQQNNTPNLRVVHGIRLWFLPGVSEVGL 277

Query: 253 EMVPASGEVRFGMDIQRTDEGFISVSAVTKGSAADRCGLGSLLEEAKTTNHLLLIARLEG 312
           EM+PA G+VRFGMDIQRT+EGFI VS+VTKGSAADRCGLGSLLEEAK+TN+LLLI+RLEG
Sbjct: 278 EMIPAPGDVRFGMDIQRTEEGFICVSSVTKGSAADRCGLGSLLEEAKSTNYLLLISRLEG 337

Query: 313 KSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRMDSVRLHIMALPDGSDAQANETSNKLRT 372
           KSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRMDSVRLHIMALPD SDAQ   + NK +T
Sbjct: 338 KSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRMDSVRLHIMALPDSSDAQLTISINKSQT 397

[Close]

BLAST of CmoCh01G018010 vs. NCBI nr
Match: gi|700200205|gb|KGN55363.1| (hypothetical protein Csa_4G646370 [Cucumis sativus])

HSP 1 Score: 619.8 bits (1597), Expect = 3.2e-174
Identity = 311/361 (86.15%), Postives = 335/361 (92.80%), Query Frame = 1


Query: 18  MEDWDETMPLPGDVIEGVAEDNDEELFVSTKIKADLSSHLAKISQQFEVVWLKVKRGDAT 77
           MEDWDETMPLPGDVIEGVAE +++ELFVS K KADLSS L +I+QQFEVVWLKVKRGDAT
Sbjct: 1   MEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDAT 60

Query: 78  LKLRARIIQEKASILHRKFTVGAATDDRHVVVLGDLTFDQCNELQEMSRRISNPDGAEFN 137
           LKLRARIIQEKASIL RKFT+ AATDDRHV +LGDLT DQC+ELQEMSRRISN +G EFN
Sbjct: 61  LKLRARIIQEKASILQRKFTIRAATDDRHVAILGDLTLDQCSELQEMSRRISNLNGGEFN 120

Query: 138 RRGVKYEWSKKLDLHLPDHRSSVISSILFVPLQGEHSMEATTSRCMAWFCAAVSSGAPLV 197
           R+GVKYEWSKKLD +LPDHRSSVISSILF+PL+GEHSMEATTSRCMAWFCAAVSSGAPLV
Sbjct: 121 RKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLV 180

Query: 198 FVNIQSEQIVNVAQDKTRKTGKESWWSKQQNNTPNLKVVHGIRLWFLPGVSEVPLEMVPA 257
           FVNIQSEQIVNV Q K R T KESWWSKQQ NTP+L+VVHGIRLWFLPGVSEV LEM+PA
Sbjct: 181 FVNIQSEQIVNVTQKKNRNTRKESWWSKQQYNTPSLRVVHGIRLWFLPGVSEVGLEMIPA 240

Query: 258 SGEVRFGMDIQRTDEGFISVSAVTKGSAADRCGLGSLLEEAKTTNHLLLIARLEGKSVIP 317
            G+VRFGMDIQRT+EGFI VS+VTKGSAADRCGLGSLLEEA +TN+LLLI+RLEG+SVIP
Sbjct: 241 PGDVRFGMDIQRTEEGFICVSSVTKGSAADRCGLGSLLEEAMSTNYLLLISRLEGRSVIP 300

Query: 318 SNVSSTGLIHCCDQAEIRSTLVSAMDRMDSVRLHIMALPDGSDAQANETSNKLRTTRKLF 377
           SNVSSTGLIHCCDQAEIRSTLVSAMDRMDSVRLHIMALPD SDAQANETS KL+TTRK  
Sbjct: 301 SNVSSTGLIHCCDQAEIRSTLVSAMDRMDSVRLHIMALPDSSDAQANETS-KLQTTRKFL 360

Query: 378 P 379
           P
Sbjct: 361 P 360

[Close]

BLAST of CmoCh01G018010 vs. NCBI nr
Match: gi|224142919|ref|XP_002324779.1| (hypothetical protein POPTR_0018s05490g [Populus trichocarpa])

HSP 1 Score: 482.3 bits (1240), Expect = 8.0e-133
Identity = 236/367 (64.31%), Postives = 299/367 (81.47%), Query Frame = 1


Query: 6   TVVCVKRVKQEAMEDWDETMPLPGDVIEGVAEDNDEELFVSTKIKADLSSHLAKISQQFE 65
           T+VCV+RVKQEA E+WDE+MPLPGD+IEG AE+N +ELFV  K K+DLSS L KIS Q E
Sbjct: 16  TLVCVRRVKQEASEEWDESMPLPGDIIEGFAENNADELFVPAKAKSDLSSQLGKISPQTE 75

Query: 66  VVWLKVKRGDATLKLRARIIQEKASILHRKFTVGAATDDRHVVVLGDLTFDQCNELQEMS 125
            VWLKV+RG+ TLKLRAR++ +K+++L R+FT+ AA DDRHV VLGDLT +QC ELQEMS
Sbjct: 76  TVWLKVRRGERTLKLRARVMPDKSAVLQRRFTIKAANDDRHVAVLGDLTLEQCTELQEMS 135

Query: 126 RRISNPDGAEFNRRGVKYEWSKKLDLHLPDHRSSVISSILFVPLQGEHSMEATTSRCMAW 185
           R++ N D   F++RGVKY+W  K+D +LPD RSSV+SSILF+PLQGEHS+EATT RCMAW
Sbjct: 136 RKVVNMDSWAFSKRGVKYDWKMKVDNYLPDQRSSVVSSILFMPLQGEHSIEATTGRCMAW 195

Query: 186 FCAAVSSGAPLVFVNIQSEQIVNVAQDKTRKTGKE-SWWSKQQNNTPNLKVVHGIRLWFL 245
           F AAVSSGAP+VFVNIQ+EQ +NV  +KT  TGKE SW  ++ NNTP ++++ GIRLWFL
Sbjct: 196 FSAAVSSGAPIVFVNIQTEQTLNV--EKTLCTGKELSWGGQKSNNTP-VQILQGIRLWFL 255

Query: 246 PGVSEVPLEMVPASGEVRFGMDIQRTDEGFISVSAVTKGSAADRCGLGSLLEEAKTTNHL 305
           PGV+E+ LEM+P  GE RFGMDI+R DEGFI V +VTKGSAA+R GLG L EEA    HL
Sbjct: 256 PGVAEILLEMIPEPGETRFGMDIKRIDEGFICVCSVTKGSAAERAGLGDLFEEANKVGHL 315

Query: 306 LLIARLEGKSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRMDSVRLHIMALPD---GSDA 365
           L+I+RLEGKS++PS+V S GLIHCCDQ E++ TL+S++D MDS+++H+MA P+    S+ 
Sbjct: 316 LVISRLEGKSLMPSSVCSMGLIHCCDQNEVKDTLISSIDEMDSIQIHLMAWPNQTHSSNT 375

Query: 366 QANETSN 369
           +AN  +N
Sbjct: 376 KANGVAN 379

The following BLAST results are available for this feature:

BLAST of CmoCh01G018010 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh01G018010 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0T5_CUCSA	2.2e-174	86.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G646370 PE=4 SV=1	[more]
B9IKD1_POPTR	5.6e-133	64.31	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s05490g PE=4 SV=1	[more]
A0A061GJD4_THECC	7.5e-122	61.90	Uncharacterized protein OS=Theobroma cacao GN=TCM_037357 PE=4 SV=1	[more]
A0A0D2U9G3_GOSRA	9.2e-120	59.78	Uncharacterized protein OS=Gossypium raimondii GN=B456_010G097400 PE=4 SV=1	[more]
F8WLA6_CITUN	5.1e-118	60.34	Putative uncharacterized protein ORF39 OS=Citrus unshiu GN=ORF39 PE=4 SV=1	[more]

BLAST of CmoCh01G018010 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G12070.1	2.3e-29	27.52	unknown protein	[more]

BLAST of CmoCh01G018010 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778696704\|ref\|XP_011654193.1\|	7.1e-182	85.98	PREDICTED: uncharacterized protein LOC105435315 isoform X1 [Cucumis sativus]	[more]
gi\|778696708\|ref\|XP_011654194.1\|	2.5e-179	85.45	PREDICTED: uncharacterized protein LOC105435315 isoform X2 [Cucumis sativus]	[more]
gi\|659105351\|ref\|XP_008453075.1\|	1.1e-174	86.11	PREDICTED: uncharacterized protein LOC103493899 [Cucumis melo]	[more]
gi\|700200205\|gb\|KGN55363.1\|	3.2e-174	86.15	hypothetical protein Csa_4G646370 [Cucumis sativus]	[more]
gi\|224142919\|ref\|XP_002324779.1\|	8.0e-133	64.31	hypothetical protein POPTR_0018s05490g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G018010.1	CmoCh01G018010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33984	FAMILY NOT NAMED	coord: 6..357 score: 8.4E
None	No IPR available	PANTHER	PTHR33984:SF4	SUBFAMILY NOT NAMED	coord: 6..357 score: 8.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G018010	Cucsa.299690	Cucumber (Gy14) v1	cgycmoB0821
CmoCh01G018010	CmaCh01G017110	Cucurbita maxima (Rimu)	cmacmoB470
CmoCh01G018010	Cla020851	Watermelon (97103) v1	cmowmB429
CmoCh01G018010	Csa4G646370	Cucumber (Chinese Long) v2	cmocuB453
CmoCh01G018010	MELO3C016900	Melon (DHL92) v3.5.1	cmomeB435
CmoCh01G018010	ClCG05G018160	Watermelon (Charleston Gray)	cmowcgB408
CmoCh01G018010	CSPI04G25610	Wild cucumber (PI 183967)	cmocpiB457
CmoCh01G018010	Lsi04G013990	Bottle gourd (USVL1VR-Ls)	cmolsiB422
CmoCh01G018010	Cp4.1LG02g05830	Cucurbita pepo (Zucchini)	cmocpeB445
CmoCh01G018010	MELO3C016900.2	Melon (DHL92) v3.6.1	cmomedB499
CmoCh01G018010	CsaV3_4G035920	Cucumber (Chinese Long) v3	cmocucB0541
CmoCh01G018010	Cla97C05G099470	Watermelon (97103) v2	cmowmbB456
CmoCh01G018010	Carg10709	Silver-seed gourd	carcmoB1043

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G018010	Cucurbita moschata (Rifu)	cmocmoB014
CmoCh01G018010	Cucurbita moschata (Rifu)	cmocmoB067
CmoCh01G018010	Cucurbita maxima (Rimu)	cmacmoB042
CmoCh01G018010	Cucurbita maxima (Rimu)	cmacmoB469
CmoCh01G018010	Cucurbita pepo (Zucchini)	cmocpeB462
CmoCh01G018010	Cucurbita pepo (Zucchini)	cmocpeB465
CmoCh01G018010	Bottle gourd (USVL1VR-Ls)	cmolsiB412
CmoCh01G018010	Cucumber (Gy14) v2	cgybcmoB103
CmoCh01G018010	Cucumber (Gy14) v2	cgybcmoB475
CmoCh01G018010	Cucumber (Gy14) v2	cgybcmoB926
CmoCh01G018010	Melon (DHL92) v3.6.1	cmomedB455
CmoCh01G018010	Silver-seed gourd	carcmoB0133
CmoCh01G018010	Silver-seed gourd	carcmoB0614
CmoCh01G018010	Silver-seed gourd	carcmoB0872
CmoCh01G018010	Wax gourd	cmowgoB0617
CmoCh01G018010	Wax gourd	cmowgoB0629