CmoCh01G017610 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh01G017610
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionDUF1639 family protein
LocationCmo_Chr01 : 13081649 .. 13084731 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGGGATCCTCCGAGAAGCAATAATAACAGTAACGGCACCGCCAGTAATAAAGTGGACATTTCGGGTAGAAGCGGCAGCGGAGGAGCTGAAGGGTCGTTGCTACTGAGATCCAGTTGTGATGCTACAAGACAGGCCGCCGCCGCCGCCGCTGCCGCTGCCGCACCATCGGACTTTCTTTTGCAGTGGGGAAACCGGAAGCGGCTTAGATGCATGAAGGTTCAAGGAAGAGACAAAAACGACCCGACCGCTCCGGCTCATAGGACCACCGCCCGTATCGACCGGCGAGTGGTGAGAGCCGACAAAGACTCCCCGAACCGGACCACCATCACCCATTCTCCTGCTGCTGCGAATCTTAACAGCAGCAGCAATGGGTATTTGAATCTTCGGCAAAGAGGATCCTCCCCGCAGCTCCCACCTCCTCATCAGCGCATTCTCAGGTACTCTCCATTTGCTTAAACGAATTGAAATCTATGTTCATCTGTGATTTTCTTTCGTAGTAAAGGTGTTTGTGAAAATGCCCAAATGAGGGATTTTTATGCTTTTTGGGTGGACAGCTGACAGATGTGTGTTGGCGTGAGGGTTTTTAGAGCCCAATGGGAGCCGTGGGATCATTAATTTGGGATTTGGGATTATGGGGGAGGCGGGGGGCGGGGGGCGGGGGGTGGACCCATACACTACACCCACCCTGACGCGTCGTCACACGTAATGTTAGAGATCTTGAAGGAATTTGTTAATCCAACGGCTAAGAAGAAACAGTATTTTCATTTAAAAGAATAGAAATTAAGAGCACCCTGGAAAAGCAAAGCAAAGAAAAAGCAAGAAAACCAAAAGCCAAAGCTAAAAATCCTCCCCGCATTCGCTACCTGTCTCAGCGATCTTAAAGATCTTTCCCCCAAGGTCAATTTTGGAATTTGACTTTTTCTTTAAATCATCCCTTCTATTCTACTAGTTTCTATTTTTACTTTTTTTTTTTTTTTATATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTCTTTTTTTTTTTTTTTATATATATATAAAAAATTCGATATCTTCACTATTTTCCTTTTTTAGGAACTCGGAGACGACGGGGGCGATGAGAGGGCACGGCAACGGCGGGGTCCGGGGAATTGCCTCGCCGGACAGAGGGGCGCACGATAGAAGAGGAAACAACAACCACCACCATCATCACCACTCTAACAACAACAACAACAACAATCATCACCATAATGATAATAACAACAAATCAGCGGCTACATCGGACACGGCGCACGATAGCAAAAAGGGTGGGTCTTCGTCCGGTGGCAGTGGGGAGGCCGGTTTGCCCCAAGTGTGGCCGCCAAAATTCGCGATTGCTTTGACGAACAAGGAAAAAGAAGAGGATTTCTTGGTCATCAAGGGCTCCAAGTTGCCACAGAGACCCAAGAAACGTGCCAAGATTATCCAACGCACCGTCAACGTAAGCCCCCCTTGTTCTCCTCTATTAACTACTACCCATTTATTATCTCCTATTTCTTTTACTTTGTTTATTGTGCGTAGCGTAGGAAGTGATCCAAAAAAAAAAAAAAAAAAAAAAAGTAGAAATTTTAGACATAAAANTCCATTCCCTGGAATGCTAATGCTACAAAACAAGACTAGAGCTTTCAGGGGCTGCGTTTGATTCACGTTCTTGTATGGGATAGGACAGTGTACGGTATTTCCTGGTCGGCTGCTGTGCTGTTTGTGTGTATCACTCCCCCTTGTCTTCTCCGCATTCTCAACAGTTGTTGTTTCTGAGGGTAGAAGAAAAGGGAAAAACGGAATAATTCTCACTGTTCAAGTAAATAAAGAAAATAGTTGATATTTCGTTGAAGTGAAAATAGATGATGCATAGTGTTATGTAAACTGTGGATGATGGTAGTAAGTGAGATTATTATTAACCATGGATGCAGCTGGTGAGCCCGGGAGCATGGCTATCCGATCTCACTCTGGAGCGCTACGAAGTTCGAGAGAAGAAGATTTCAAAGAAGGTACTACTTCTTAAATATGTTTGATTTTAGGACGTGTTTGTTAATGAATGAATACTGATGAGGATGTTGATAATGGATGATGGCAGAGACCGAGAGGGTTGAAGGCAATGGGCAACATGGAGTCGGATTCGGAGTGAGTTTGAGCGTGTGTTAGCCTAGAAGAAGCCTCTTAGGGGATGCCATGATATGTACAAACCACTGATTCCCTTTCCAAAATGAAGATAGCTCAAGATGTAGGGAATTCATTTTTGTTCCTTTGCTCTCTTATTTATTCAATTTTATTCATCCTTTTTGGTTCCCCTTTTCAAGTTTGAAGGTAGGAGGAGAGGTTGAGGGTGTTTTTCATCCATTTTCTCCAATTTGTACATATCTTGCCCATCCCCCACATCATATCTTATAAAGGTTTTCTTCCGACCATCTCGGGAGTTTTAATATAAACCCTAATTTCGAGTCTCAATTCAGAAATTTGCATAAGTCTGACCATCTCAAAAGGGTGTTCTTCCGACCATCTCGAGAGTTTTAATATAAACCCTAATT

mRNA sequence

ATGGAAAGGGATCCTCCGAGAAGCAATAATAACAGTAACGGCACCGCCAGTAATAAAGTGGACATTTCGGGTAGAAGCGGCAGCGGAGGAGCTGAAGGGTCGTTGCTACTGAGATCCAGTTGTGATGCTACAAGACAGGCCGCCGCCGCCGCCGCTGCCGCTGCCGCACCATCGGACTTTCTTTTGCAGTGGGGAAACCGGAAGCGGCTTAGATGCATGAAGGTTCAAGGAAGAGACAAAAACGACCCGACCGCTCCGGCTCATAGGACCACCGCCCGTATCGACCGGCGAGTGGTGAGAGCCGACAAAGACTCCCCGAACCGGACCACCATCACCCATTCTCCTGCTGCTGCGAATCTTAACAGCAGCAGCAATGGGTATTTGAATCTTCGGCAAAGAGGATCCTCCCCGCAGCTCCCACCTCCTCATCAGCGCATTCTCAGGAACTCGGAGACGACGGGGGCGATGAGAGGGCACGGCAACGGCGGGGTCCGGGGAATTGCCTCGCCGGACAGAGGGGCGCACGATAGAAGAGGAAACAACAACCACCACCATCATCACCACTCTAACAACAACAACAACAACAATCATCACCATAATGATAATAACAACAAATCAGCGGCTACATCGGACACGGCGCACGATAGCAAAAAGGGTGGGTCTTCGTCCGGTGGCAGTGGGGAGGCCGGTTTGCCCCAAGTGTGGCCGCCAAAATTCGCGATTGCTTTGACGAACAAGGAAAAAGAAGAGGATTTCTTGGTCATCAAGGGCTCCAAGTTGCCACAGAGACCCAAGAAACGTGCCAAGATTATCCAACGCACCGTCAACAGCTTTCAGGGGCTGCGTTTGATTCACGTTCTTGTATGGGATAGGACAGTGTACGCTGGTGAGCCCGGGAGCATGGCTATCCGATCTCACTCTGGAGCGCTACGAAGTTCGAGAGAAGAAGATTTCAAAGAAGAGACCGAGAGGGTTGAAGGCAATGGGCAACATGGAGTCGGATTCGGAGTGAGTTTGAGCGTGTGTTAGCCTAGAAGAAGCCTCTTAGGGGATGCCATGATATGTACAAACCACTGATTCCCTTTCCAAAATGAAGATAGCTCAAGATGTAGGGAATTCATTTTTGTTCCTTTGCTCTCTTATTTATTCAATTTTATTCATCCTTTTTGGTTCCCCTTTTCAAGTTTGAAGGTAGGAGGAGAGGTTGAGGGTGTTTTTCATCCATTTTCTCCAATTTGTACATATCTTGCCCATCCCCCACATCATATCTTATAAAGGTTTTCTTCCGACCATCTCGGGAGTTTTAATATAAACCCTAATTTCGAGTCTCAATTCAGAAATTTGCATAAGTCTGACCATCTCAAAAGGGTGTTCTTCCGACCATCTCGAGAGTTTTAATATAAACCCTAATT

Coding sequence (CDS)

ATGGAAAGGGATCCTCCGAGAAGCAATAATAACAGTAACGGCACCGCCAGTAATAAAGTGGACATTTCGGGTAGAAGCGGCAGCGGAGGAGCTGAAGGGTCGTTGCTACTGAGATCCAGTTGTGATGCTACAAGACAGGCCGCCGCCGCCGCCGCTGCCGCTGCCGCACCATCGGACTTTCTTTTGCAGTGGGGAAACCGGAAGCGGCTTAGATGCATGAAGGTTCAAGGAAGAGACAAAAACGACCCGACCGCTCCGGCTCATAGGACCACCGCCCGTATCGACCGGCGAGTGGTGAGAGCCGACAAAGACTCCCCGAACCGGACCACCATCACCCATTCTCCTGCTGCTGCGAATCTTAACAGCAGCAGCAATGGGTATTTGAATCTTCGGCAAAGAGGATCCTCCCCGCAGCTCCCACCTCCTCATCAGCGCATTCTCAGGAACTCGGAGACGACGGGGGCGATGAGAGGGCACGGCAACGGCGGGGTCCGGGGAATTGCCTCGCCGGACAGAGGGGCGCACGATAGAAGAGGAAACAACAACCACCACCATCATCACCACTCTAACAACAACAACAACAACAATCATCACCATAATGATAATAACAACAAATCAGCGGCTACATCGGACACGGCGCACGATAGCAAAAAGGGTGGGTCTTCGTCCGGTGGCAGTGGGGAGGCCGGTTTGCCCCAAGTGTGGCCGCCAAAATTCGCGATTGCTTTGACGAACAAGGAAAAAGAAGAGGATTTCTTGGTCATCAAGGGCTCCAAGTTGCCACAGAGACCCAAGAAACGTGCCAAGATTATCCAACGCACCGTCAACAGCTTTCAGGGGCTGCGTTTGATTCACGTTCTTGTATGGGATAGGACAGTGTACGCTGGTGAGCCCGGGAGCATGGCTATCCGATCTCACTCTGGAGCGCTACGAAGTTCGAGAGAAGAAGATTTCAAAGAAGAGACCGAGAGGGTTGAAGGCAATGGGCAACATGGAGTCGGATTCGGAGTGAGTTTGAGCGTGTGTTAG
Homology
[Close]
BLAST of CmoCh01G017610 vs. TrEMBL
Match: A0A0A0L584_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G645900 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 9.0e-98
Identity = 213/279 (76.34%), Postives = 228/279 (81.72%), Query Frame = 1 

Query: 1   MERDPPRSNNN--SNGTASNKVDISGRSGSGGAEGSLLLRSSCDATRQAAAAAAAAAAPS 60
           MERD  R+NNN  SNGTA+NKVD SGRSG        +LRS+ DATRQ    +      S
Sbjct: 1   MERDTIRTNNNNNSNGTANNKVDTSGRSGVD------VLRSNSDATRQTTTPS------S 60

Query: 61  DFLLQWGNRKRLRCMKVQGRDKNDPTAPAHRTT-ARIDRRVVRADKDSPNRTTITHSPAA 120
           DF+LQWGNRKRLRCMKVQGRDK DP  PAHRTT AR+DRRVVR DKDSPNRT   H P A
Sbjct: 61  DFVLQWGNRKRLRCMKVQGRDKTDPATPAHRTTTARVDRRVVRTDKDSPNRT---HGPPA 120

Query: 121 ANLNSSSNGYLNLRQRGSSPQLPPPHQRILRNSETTGAMRGHGNGGVRGIASPDRGAHDR 180
                  NGYLNLRQR SSPQLPPPH RILRNSET GAMRGHGNGGVRGIASPDR AHDR
Sbjct: 121 -------NGYLNLRQRPSSPQLPPPHHRILRNSETAGAMRGHGNGGVRGIASPDRVAHDR 180

Query: 181 RGNNNHHHHHHSNNNNNNNHHHNDNNNKSAATSDTAHDSKKGGSSSGGSGEAGLPQVWPP 240
           RG +N+HHHH +NNNN+++HHHN+NNNKS  TS+TAHDSKKGGSSSGGSGEA LPQVWPP
Sbjct: 181 RGGSNNHHHHSNNNNNSHHHHHNENNNKSGTTSETAHDSKKGGSSSGGSGEAALPQVWPP 240

Query: 241 KFAIALTNKEKEEDFLVIKGSKLPQRPKKRAKIIQRTVN 277
           KFAIALTNKEKEEDFL IKGSKLPQRPKKRAKIIQRTVN
Sbjct: 241 KFAIALTNKEKEEDFLAIKGSKLPQRPKKRAKIIQRTVN 257

[Close]
BLAST of CmoCh01G017610 vs. TrEMBL
Match: W9RS19_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_019535 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 6.9e-74
Identity = 171/272 (62.87%), Postives = 197/272 (72.43%), Query Frame = 1 

Query: 7   RSNNNSNGTASNKVDISGRSGSGGAEGSLLLRSSCDATRQAAAAAAAAAAPSDFLLQWGN 66
           R N+N+N T     +  GR   GG +GSLLLR+S DA RQ  +        SDF+LQWGN
Sbjct: 21  RQNHNNNNT-----NTCGRERGGGGDGSLLLRASSDAVRQTTS--------SDFVLQWGN 80

Query: 67  RKRLRCMKVQ--GRDKNDPTAPAHRTTARIDRRVVRADKDSPNRTTITHSPAAANLNSSS 126
           RKRLRCMKVQ   +DK+D TAP HRTT R+DRRVVRADKD  N+ + T++          
Sbjct: 81  RKRLRCMKVQVKDKDKDDSTAPVHRTTVRVDRRVVRADKDLSNQPSTTNN---------G 140

Query: 127 NGYLNLRQRGSSPQLPPPHQRILRNSETTGAMRGHGNGGVRGIASPDRGAHDRRGNNNHH 186
            GY+NLRQR SSPQ PPP  R+LRN ET+GAMRG  NGGVRGIASPDRGAHD++G     
Sbjct: 141 GGYINLRQRPSSPQ-PPPSHRVLRNLETSGAMRGQSNGGVRGIASPDRGAHDKKG----- 200

Query: 187 HHHHSNNNNNNNHHHNDNNNKSAATSDTAHDSKKGGSSSGGSGEAGLPQVWPPKFAIALT 246
               +NN N+ NHHHN+NNNKSAA+S+TAHDSKKGGSSSG   +A  P VWPPKF IALT
Sbjct: 201 ----TNNGNHCNHHHNENNNKSAASSETAHDSKKGGSSSGSGEQAAAPPVWPPKFVIALT 260

Query: 247 NKEKEEDFLVIKGSKLPQRPKKRAKIIQRTVN 277
           NKEKEEDF   KGSKLPQRPKKRAK IQRT+N
Sbjct: 261 NKEKEEDFFAFKGSKLPQRPKKRAKFIQRTLN 260

[Close]
BLAST of CmoCh01G017610 vs. TrEMBL
Match: A0A067KDB9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07698 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 7.9e-70
Identity = 167/280 (59.64%), Postives = 205/280 (73.21%), Query Frame = 1 

Query: 1   MERDPPRSNNNSNGTASNKVDISGRSGSGGAEGSLLLRSSCDATRQAAAAAAAAAAPSDF 60
           ME+D  RSNNN N   ++K+        GGA+G  LLR+  D+ +Q           SDF
Sbjct: 1   MEKDYLRSNNNVNTNNNHKI--------GGADG--LLRAISDSAKQTT---------SDF 60

Query: 61  LLQWGNRKRLRCMKVQGRDKNDPTAPAHRTTARIDRRVVRADKDSPNRTTITHSPAAANL 120
           +LQWGNRKRLRCMK+Q +D  D   P HRTT R+DRRVVRADK++ N+ + T++ +  N 
Sbjct: 61  VLQWGNRKRLRCMKIQVKD--DSNTPVHRTTVRVDRRVVRADKETSNQPSTTNNNS--NQ 120

Query: 121 NSSSNGYLNLRQRGSSPQLPPPHQRILRNSETTGAMRGHGNGGVRGIASPDRGAHDRRG- 180
           ++ SN YLNLRQR SSP  PPP QR+LRNSE   AMRG  NGGVR ++SPDR AHD+R  
Sbjct: 121 SNQSNVYLNLRQRPSSPP-PPPPQRVLRNSENLSAMRGQSNGGVRSLSSPDRAAHDKRNA 180

Query: 181 ---NNNHHHHHHSNNNNNNNHHHNDNNNKSAATSDTAHDSKKGGSSSGGSGEAGLPQVWP 240
              +NNHHHHH+SN+ N NN+++++NNNKS A+S+TAHDSKKGG SS GSGEA  P VWP
Sbjct: 181 NNNHNNHHHHHNSNHENKNNNNNHNNNNKSGASSETAHDSKKGGGSSSGSGEAAPPVVWP 240

Query: 241 PKFAIALTNKEKEEDFLVIKGSKLPQRPKKRAKIIQRTVN 277
           PKF IALTNKEKEEDF+  KGSKLPQRPKKRAK +QRT+N
Sbjct: 241 PKFVIALTNKEKEEDFIAFKGSKLPQRPKKRAKFVQRTLN 256

[Close]
BLAST of CmoCh01G017610 vs. TrEMBL
Match: A0A0D2PIC3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G023800 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 8.7e-69
Identity = 171/282 (60.64%), Postives = 198/282 (70.21%), Query Frame = 1 

Query: 1   MERDPPRSNNNSNGTASNKVDISGRSGSGGAEGSLLLRSSCDATRQAAAAAAAAAAPSDF 60
           ME+D  R NN+  G + N      R  +GGA    LLRSS D  +Q A++       SDF
Sbjct: 1   MEKDALRINNSGIGNSINY----SRDRNGGAGDGGLLRSSSDPAKQTASS-------SDF 60

Query: 61  LLQWGNRKRLRCMKVQGRDKNDPTAPAHRTTARIDRRVVRADKDSPNRTTITHSPAAANL 120
           +LQWGNRKRLRCMK+Q +D  D + P +RTT R+DRRVVRADKDS N+ +          
Sbjct: 61  VLQWGNRKRLRCMKIQVKD--DQSGPVNRTTVRVDRRVVRADKDSSNQPSN--------- 120

Query: 121 NSSSNGYLNLRQRGSSPQLPPPHQRILRNSETTGAMRGHGNGGVRGIASPDRGAHDRR-- 180
           N+  NGY NLRQR +SPQ PP  QR+LRNSE + AMRG  NGGVRG ASPDRGAHD+R  
Sbjct: 121 NNHGNGYFNLRQRPASPQAPPS-QRVLRNSENSSAMRGQNNGGVRGFASPDRGAHDKRVG 180

Query: 181 ----GNNNHHHHHHSNNNNNNNHHHNDNNNKSAATSDTAHDSKKGGSSSGGSGEAGLPQV 240
                NNNHHHHHH      ++HHH+ +NNKSAA+SD  HDSKKGGSSS GSGEA  P V
Sbjct: 181 GNNHNNNNHHHHHH------HHHHHHHHNNKSAASSDMTHDSKKGGSSS-GSGEAAPPIV 240

Query: 241 WPPKFAIALTNKEKEEDFLVIKGSKLPQRPKKRAKIIQRTVN 277
           WPPKF IALTNKEKEEDF+ IKGSKLPQRPKKRAK IQRT+N
Sbjct: 241 WPPKFVIALTNKEKEEDFMAIKGSKLPQRPKKRAKFIQRTLN 252

[Close]
BLAST of CmoCh01G017610 vs. TrEMBL
Match: A0A061GKC3_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_037254 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 8.2e-67
Identity = 170/278 (61.15%), Postives = 200/278 (71.94%), Query Frame = 1 

Query: 1   MERDPPRSNNNSNGTASNKVDISGRSGSGGAEGSLLLRSSCDATRQAAAAAAAAAAPSDF 60
           ME+D  R+NNN N T   +     R+GS G     LLRSS D  +Q  ++       SDF
Sbjct: 1   MEKDSLRTNNNGNNTNHCR----DRTGSDGG----LLRSSSDPAKQTPSS-------SDF 60

Query: 61  LLQWGNRKRLRCMKVQGRDKNDPTAPAHRTTARIDRRVVRADKDSPNRTTITHSPAAANL 120
           +LQWGNRKRLRCMK+Q +D  D + P HRTT R+DRRVVRADKDS ++ +          
Sbjct: 61  VLQWGNRKRLRCMKIQVKD--DQSGPVHRTTVRVDRRVVRADKDSSSQPSN--------- 120

Query: 121 NSSSNGYLNLRQRGSSPQLPPPHQRILRNSETTGAMRGHGNGGVRGIASPDRGAHDRRGN 180
           N+  NG  NLRQR  SPQ PPP QR+LRNSE   AMRG  NGGVRG ASPDRGA D+RG 
Sbjct: 121 NNHGNGCFNLRQRPPSPQAPPP-QRVLRNSENPSAMRGQSNGGVRGFASPDRGARDKRGG 180

Query: 181 NNHHHHHHSNNNNNNNHHHNDNNNKSAATSDTAHDSKKGGSSSGGSGEAGLPQVWPPKFA 240
           N+++++H+SNN+NN+ H     NNKSAA+S+TAHDSKKGGSSSG SGEA +P VWPPKF 
Sbjct: 181 NHNNNNHYSNNDNNHQH-----NNKSAASSETAHDSKKGGSSSG-SGEA-VPPVWPPKFV 240

Query: 241 IALTNKEKEEDFLVIKGSKLPQRPKKRAKIIQRTVNSF 279
           IALTNKEKEEDFL IKGSKLPQRPKKRAK IQRT+N F
Sbjct: 241 IALTNKEKEEDFLAIKGSKLPQRPKKRAKFIQRTLNEF 244

[Close]
BLAST of CmoCh01G017610 vs. TAIR10
Match: AT1G55340.1 (AT1G55340.1 Protein of unknown function (DUF1639))

HSP 1 Score: 65.9 bits (159), Expect = 5.7e-11
Identity = 31/42 (73.81%), Postives = 37/42 (88.10%), Query Frame = 1 

Query: 234 VWPPKFAIALTNKEKEEDFLVIKGSKLPQRPKKRAKIIQRTV 276
           VWP K  IAL+NKEKEEDFL +KG KLPQRPKKRAK++Q+T+
Sbjct: 122 VWP-KLYIALSNKEKEEDFLAMKGCKLPQRPKKRAKLVQKTL 162

[Close]
BLAST of CmoCh01G017610 vs. TAIR10
Match: AT3G03880.1 (AT3G03880.1 Protein of unknown function (DUF1639))

HSP 1 Score: 52.4 bits (124), Expect = 6.5e-07
Identity = 28/56 (50.00%), Postives = 37/56 (66.07%), Query Frame = 1 

Query: 220 GSSSGGSGEAGLPQVWPPKFAIALTNKEKEEDFLVIKGSKLPQRPKKRAKIIQRTV 276
           G+ +G         +WP  F I L+NKEKEEDF+ +KG K   RPKKRAK+IQR++
Sbjct: 95  GNINGEDSNNKEESMWPKLF-ITLSNKEKEEDFMAMKGCKPSHRPKKRAKLIQRSL 149

[Close]
BLAST of CmoCh01G017610 vs. TAIR10
Match: AT1G25370.1 (AT1G25370.1 Protein of unknown function (DUF1639))

HSP 1 Score: 49.3 bits (116), Expect = 5.5e-06
Identity = 24/51 (47.06%), Postives = 36/51 (70.59%), Query Frame = 1 

Query: 237 PKFAIALTNKEKEEDFLVIKGSKLPQRPKKRAKIIQRTVNS-FQGLRLIHV 287
           P F++ L+ KE EEDF+ + G + P+RPKKR+K +Q+ ++S F GL L  V
Sbjct: 204 PMFSMKLSKKEMEEDFIGMVGHRAPRRPKKRSKTVQKKLDSLFPGLYLTEV 254

[Close]
BLAST of CmoCh01G017610 vs. NCBI nr
Match: gi|778696545|ref|XP_011654165.1| (PREDICTED: nuclear transcription factor Y subunit gamma-like [Cucumis sativus])

HSP 1 Score: 365.2 bits (936), Expect = 1.3e-97
Identity = 213/279 (76.34%), Postives = 228/279 (81.72%), Query Frame = 1 

Query: 1   MERDPPRSNNN--SNGTASNKVDISGRSGSGGAEGSLLLRSSCDATRQAAAAAAAAAAPS 60
           MERD  R+NNN  SNGTA+NKVD SGRSG        +LRS+ DATRQ    +      S
Sbjct: 1   MERDTIRTNNNNNSNGTANNKVDTSGRSGVD------VLRSNSDATRQTTTPS------S 60

Query: 61  DFLLQWGNRKRLRCMKVQGRDKNDPTAPAHRTT-ARIDRRVVRADKDSPNRTTITHSPAA 120
           DF+LQWGNRKRLRCMKVQGRDK DP  PAHRTT AR+DRRVVR DKDSPNRT   H P A
Sbjct: 61  DFVLQWGNRKRLRCMKVQGRDKTDPATPAHRTTTARVDRRVVRTDKDSPNRT---HGPPA 120

Query: 121 ANLNSSSNGYLNLRQRGSSPQLPPPHQRILRNSETTGAMRGHGNGGVRGIASPDRGAHDR 180
                  NGYLNLRQR SSPQLPPPH RILRNSET GAMRGHGNGGVRGIASPDR AHDR
Sbjct: 121 -------NGYLNLRQRPSSPQLPPPHHRILRNSETAGAMRGHGNGGVRGIASPDRVAHDR 180

Query: 181 RGNNNHHHHHHSNNNNNNNHHHNDNNNKSAATSDTAHDSKKGGSSSGGSGEAGLPQVWPP 240
           RG +N+HHHH +NNNN+++HHHN+NNNKS  TS+TAHDSKKGGSSSGGSGEA LPQVWPP
Sbjct: 181 RGGSNNHHHHSNNNNNSHHHHHNENNNKSGTTSETAHDSKKGGSSSGGSGEAALPQVWPP 240

Query: 241 KFAIALTNKEKEEDFLVIKGSKLPQRPKKRAKIIQRTVN 277
           KFAIALTNKEKEEDFL IKGSKLPQRPKKRAKIIQRTVN
Sbjct: 241 KFAIALTNKEKEEDFLAIKGSKLPQRPKKRAKIIQRTVN 257

[Close]
BLAST of CmoCh01G017610 vs. NCBI nr
Match: gi|659103777|ref|XP_008452698.1| (PREDICTED: homeobox protein 4-like [Cucumis melo])

HSP 1 Score: 355.9 bits (912), Expect = 7.8e-95
Identity = 210/280 (75.00%), Postives = 228/280 (81.43%), Query Frame = 1 

Query: 1   MERDPPRSNNNSN--GTASNKVDISGRSGSGGAEGSLLLRSSCDATRQAAAAAAAAAAPS 60
           ME D  R+NNN+N  GTA+NKVD SGRSG        +LRS+ DATRQ    +      S
Sbjct: 1   MEGDTIRTNNNNNINGTANNKVDTSGRSGVD------VLRSNSDATRQTTTPS------S 60

Query: 61  DFLLQWGNRKRLRCMKVQGRDKNDPTAPAHRTT-ARIDRRVVRADKDSPNRTTITHSPAA 120
           DF+LQWGNRKRLRCMKVQGRDK DP  PAHRTT AR+DRRVVR DKDSPNRT   H+PA 
Sbjct: 61  DFVLQWGNRKRLRCMKVQGRDKTDPATPAHRTTTARVDRRVVRTDKDSPNRT---HAPA- 120

Query: 121 ANLNSSSNGYLNLRQRGSSPQLPPPHQRILRNSETTGAMRGHGNGGVRGIASPDRGAHDR 180
                  NGYLNLRQR SSPQLPPPH RILRNSET GAMRGHGNGGVRGIASPDR AHDR
Sbjct: 121 -------NGYLNLRQRPSSPQLPPPHHRILRNSETAGAMRGHGNGGVRGIASPDRVAHDR 180

Query: 181 RG-NNNHHHHHHSNNNNNNNHHHNDNNNKSAATSDTAHDSKKGGSSSGGSGEAGLPQVWP 240
           RG +NNHHHH ++NNNN+++HHHN+NNNKS  TS+ AHDSKKGGSSSGGSGEA +PQVWP
Sbjct: 181 RGGSNNHHHHSNNNNNNHHHHHHNENNNKSGTTSERAHDSKKGGSSSGGSGEAAVPQVWP 240

Query: 241 PKFAIALTNKEKEEDFLVIKGSKLPQRPKKRAKIIQRTVN 277
           PKFAIALTNKEKEEDFL IKGSKLPQRPKKRAKIIQRTVN
Sbjct: 241 PKFAIALTNKEKEEDFLAIKGSKLPQRPKKRAKIIQRTVN 257

[Close]
BLAST of CmoCh01G017610 vs. NCBI nr
Match: gi|703101092|ref|XP_010097096.1| (hypothetical protein L484_019535 [Morus notabilis])

HSP 1 Score: 285.8 bits (730), Expect = 9.9e-74
Identity = 171/272 (62.87%), Postives = 197/272 (72.43%), Query Frame = 1 

Query: 7   RSNNNSNGTASNKVDISGRSGSGGAEGSLLLRSSCDATRQAAAAAAAAAAPSDFLLQWGN 66
           R N+N+N T     +  GR   GG +GSLLLR+S DA RQ  +        SDF+LQWGN
Sbjct: 21  RQNHNNNNT-----NTCGRERGGGGDGSLLLRASSDAVRQTTS--------SDFVLQWGN 80

Query: 67  RKRLRCMKVQ--GRDKNDPTAPAHRTTARIDRRVVRADKDSPNRTTITHSPAAANLNSSS 126
           RKRLRCMKVQ   +DK+D TAP HRTT R+DRRVVRADKD  N+ + T++          
Sbjct: 81  RKRLRCMKVQVKDKDKDDSTAPVHRTTVRVDRRVVRADKDLSNQPSTTNN---------G 140

Query: 127 NGYLNLRQRGSSPQLPPPHQRILRNSETTGAMRGHGNGGVRGIASPDRGAHDRRGNNNHH 186
            GY+NLRQR SSPQ PPP  R+LRN ET+GAMRG  NGGVRGIASPDRGAHD++G     
Sbjct: 141 GGYINLRQRPSSPQ-PPPSHRVLRNLETSGAMRGQSNGGVRGIASPDRGAHDKKG----- 200

Query: 187 HHHHSNNNNNNNHHHNDNNNKSAATSDTAHDSKKGGSSSGGSGEAGLPQVWPPKFAIALT 246
               +NN N+ NHHHN+NNNKSAA+S+TAHDSKKGGSSSG   +A  P VWPPKF IALT
Sbjct: 201 ----TNNGNHCNHHHNENNNKSAASSETAHDSKKGGSSSGSGEQAAAPPVWPPKFVIALT 260

Query: 247 NKEKEEDFLVIKGSKLPQRPKKRAKIIQRTVN 277
           NKEKEEDF   KGSKLPQRPKKRAK IQRT+N
Sbjct: 261 NKEKEEDFFAFKGSKLPQRPKKRAKFIQRTLN 260

[Close]
BLAST of CmoCh01G017610 vs. NCBI nr
Match: gi|1009134481|ref|XP_015884470.1| (PREDICTED: probable serine/threonine-protein kinase DDB_G0282963 [Ziziphus jujuba])

HSP 1 Score: 276.6 bits (706), Expect = 6.0e-71
Identity = 167/268 (62.31%), Postives = 196/268 (73.13%), Query Frame = 1 

Query: 9   NNNSNGTASNKVDISGRSGSGGAEGSLLLRSSCDATRQAAAAAAAAAAPSDFLLQWGNRK 68
           NNNSN +  ++          GA+GSLLLR+       A++ A   + PSDF+LQWGNRK
Sbjct: 14  NNNSNSSNRDR---------NGADGSLLLRA-------ASSDAIGQSTPSDFVLQWGNRK 73

Query: 69  RLRCMKVQGRDKNDPTAPAHRTTARIDRRVVRADKDSPNRTTITHSPAAANLNSSSNGYL 128
           RLRCMK+Q +D  D +AP HRTT R+DRRVVRADKD+ + TT  H     N N+++NGYL
Sbjct: 74  RLRCMKIQVKD--DSSAPVHRTTVRVDRRVVRADKDANHPTTTIH-----NNNNNTNGYL 133

Query: 129 NLRQRGSSPQLPPPHQRILRNSETTGAMRGHGNGGVRGIASPDRGAHDRRGNNNHHHHHH 188
           NLRQR  SPQ PP H R+LRNSET+ AMRG  NGGVRGIASPDRGAHD++G         
Sbjct: 134 NLRQRPPSPQQPPSH-RVLRNSETSSAMRGQSNGGVRGIASPDRGAHDKKG--------- 193

Query: 189 SNNNNNNNHHHNDNNNKSAATSDTAHDSKKGGSSSGGSGEAGLPQVWPPKFAIALTNKEK 248
           +  NNNNNHHH++ NNKSAA+S+TAHDSKKGGSSSG    A  P VWPPKF IALTNKEK
Sbjct: 194 TTTNNNNNHHHHNENNKSAASSETAHDSKKGGSSSGSGEAAVAPPVWPPKFVIALTNKEK 248

Query: 249 EEDFLVIKGSKLPQRPKKRAKIIQRTVN 277
           EEDF+  KGSKLPQRPKKRAK IQRT+N
Sbjct: 254 EEDFIAFKGSKLPQRPKKRAKFIQRTLN 248

[Close]
BLAST of CmoCh01G017610 vs. NCBI nr
Match: gi|802632660|ref|XP_012077328.1| (PREDICTED: DEP domain-containing protein DDB_G0279099-like [Jatropha curcas])

HSP 1 Score: 272.3 bits (695), Expect = 1.1e-69
Identity = 167/280 (59.64%), Postives = 205/280 (73.21%), Query Frame = 1 

Query: 1   MERDPPRSNNNSNGTASNKVDISGRSGSGGAEGSLLLRSSCDATRQAAAAAAAAAAPSDF 60
           ME+D  RSNNN N   ++K+        GGA+G  LLR+  D+ +Q           SDF
Sbjct: 1   MEKDYLRSNNNVNTNNNHKI--------GGADG--LLRAISDSAKQTT---------SDF 60

Query: 61  LLQWGNRKRLRCMKVQGRDKNDPTAPAHRTTARIDRRVVRADKDSPNRTTITHSPAAANL 120
           +LQWGNRKRLRCMK+Q +D  D   P HRTT R+DRRVVRADK++ N+ + T++ +  N 
Sbjct: 61  VLQWGNRKRLRCMKIQVKD--DSNTPVHRTTVRVDRRVVRADKETSNQPSTTNNNS--NQ 120

Query: 121 NSSSNGYLNLRQRGSSPQLPPPHQRILRNSETTGAMRGHGNGGVRGIASPDRGAHDRRG- 180
           ++ SN YLNLRQR SSP  PPP QR+LRNSE   AMRG  NGGVR ++SPDR AHD+R  
Sbjct: 121 SNQSNVYLNLRQRPSSPP-PPPPQRVLRNSENLSAMRGQSNGGVRSLSSPDRAAHDKRNA 180

Query: 181 ---NNNHHHHHHSNNNNNNNHHHNDNNNKSAATSDTAHDSKKGGSSSGGSGEAGLPQVWP 240
              +NNHHHHH+SN+ N NN+++++NNNKS A+S+TAHDSKKGG SS GSGEA  P VWP
Sbjct: 181 NNNHNNHHHHHNSNHENKNNNNNHNNNNKSGASSETAHDSKKGGGSSSGSGEAAPPVVWP 240

Query: 241 PKFAIALTNKEKEEDFLVIKGSKLPQRPKKRAKIIQRTVN 277
           PKF IALTNKEKEEDF+  KGSKLPQRPKKRAK +QRT+N
Sbjct: 241 PKFVIALTNKEKEEDFIAFKGSKLPQRPKKRAKFVQRTLN 256

The following BLAST results are available for this feature:
BLAST of CmoCh01G017610 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh01G017610 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L584_CUCSA9.0e-9876.34Uncharacterized protein OS=Cucumis sativus GN=Csa_4G645900 PE=4 SV=1[more]
W9RS19_9ROSA6.9e-7462.87Uncharacterized protein OS=Morus notabilis GN=L484_019535 PE=4 SV=1[more]
A0A067KDB9_JATCU7.9e-7059.64Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07698 PE=4 SV=1[more]
A0A0D2PIC3_GOSRA8.7e-6960.64Uncharacterized protein OS=Gossypium raimondii GN=B456_001G023800 PE=4 SV=1[more]
A0A061GKC3_THECC8.2e-6761.15Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_037254 PE=4 SV=1[more]
BLAST of CmoCh01G017610 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G55340.15.7e-1173.81 Protein of unknown function (DUF1639)[more]
AT3G03880.16.5e-0750.00 Protein of unknown function (DUF1639)[more]
AT1G25370.15.5e-0647.06 Protein of unknown function (DUF1639)[more]
BLAST of CmoCh01G017610 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778696545|ref|XP_011654165.1|1.3e-9776.34PREDICTED: nuclear transcription factor Y subunit gamma-like [Cucumis sativus][more]
gi|659103777|ref|XP_008452698.1|7.8e-9575.00PREDICTED: homeobox protein 4-like [Cucumis melo][more]
gi|703101092|ref|XP_010097096.1|9.9e-7462.87hypothetical protein L484_019535 [Morus notabilis][more]
gi|1009134481|ref|XP_015884470.1|6.0e-7162.31PREDICTED: probable serine/threonine-protein kinase DDB_G0282963 [Ziziphus jujub... [more]
gi|802632660|ref|XP_012077328.1|1.1e-6959.64PREDICTED: DEP domain-containing protein DDB_G0279099-like [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012438DUF1639
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G017610.1CmoCh01G017610.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012438Protein of unknown function DUF1639PFAMPF07797DUF1639coord: 243..286
score: 1.7
NoneNo IPR availablePANTHERPTHR33130FAMILY NOT NAMEDcoord: 58..276
score: 7.7
NoneNo IPR availablePANTHERPTHR33130:SF12SUBFAMILY NOT NAMEDcoord: 58..276
score: 7.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh01G017610Cucsa.353210Cucumber (Gy14) v1cgycmoB0965
CmoCh01G017610CmaCh09G003280Cucurbita maxima (Rimu)cmacmoB042
CmoCh01G017610CmaCh01G017480Cucurbita maxima (Rimu)cmacmoB470
CmoCh01G017610Cla020892Watermelon (97103) v1cmowmB429
CmoCh01G017610Csa4G645900Cucumber (Chinese Long) v2cmocuB453
CmoCh01G017610MELO3C016856Melon (DHL92) v3.5.1cmomeB435
CmoCh01G017610ClCG05G017720Watermelon (Charleston Gray)cmowcgB408
CmoCh01G017610CSPI04G25170Wild cucumber (PI 183967)cmocpiB457
CmoCh01G017610Lsi04G014380Bottle gourd (USVL1VR-Ls)cmolsiB422
CmoCh01G017610Cp4.1LG02g06240Cucurbita pepo (Zucchini)cmocpeB445
CmoCh01G017610Cp4.1LG06g02360Cucurbita pepo (Zucchini)cmocpeB462
CmoCh01G017610MELO3C016856.2Melon (DHL92) v3.6.1cmomedB499
CmoCh01G017610CsaV3_4G035460Cucumber (Chinese Long) v3cmocucB0541
CmoCh01G017610Cla97C05G099010Watermelon (97103) v2cmowmbB456
CmoCh01G017610Bhi09G002599Wax gourdcmowgoB0617
CmoCh01G017610CsGy4G023470Cucumber (Gy14) v2cgybcmoB475
CmoCh01G017610Carg10677Silver-seed gourdcarcmoB1043
CmoCh01G017610Carg21744Silver-seed gourdcarcmoB0442
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh01G017610CmoCh09G003260Cucurbita moschata (Rifu)cmocmoB014
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh01G017610Cucurbita moschata (Rifu)cmocmoB020
CmoCh01G017610Wild cucumber (PI 183967)cmocpiB467
CmoCh01G017610Cucumber (Chinese Long) v2cmocuB463
CmoCh01G017610Cucumber (Gy14) v2cgybcmoB926
CmoCh01G017610Melon (DHL92) v3.6.1cmomedB455
CmoCh01G017610Wax gourdcmowgoB0629