CmoCh01G017240 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G017240
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Serine/threonine protein phosphatase
Location	Cmo_Chr01 : 12905977 .. 12907941 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCACCACCATAGCCAAGTCATTTGTACTATTGGAACCGTGTGCTACAGTAAATCGAGTGCTTTTTCATGGTGGATTTCTAGTTGTTGGCTGGCCATGGCTATGAGAAGGAATGAGAAAAAGGTAAGGTTAGGAAACGAGAGCGAAAATGACTGATTGAGTTGACTATAGCCTCCAGCTTGAACAACAAAGTGAAAATTTCTGAAACGAGCTTACCAAGAATAGTAAACGACTGAGGCGAAGACCAGACTATTTATACAATTGCTACAGTTGGAGCTTATTCGATTCGATTTCAGAAGATTACACTCACTTTCGAACATCGCTGTGTGTTTCTAGCAATATCTTGTGCGATTGATTGCTCTCGTGGTTTGTTCCATTTCCTCATTCTATTGCTGACTTTTTTTTTCGAGATTTCACGTGGATTTTCATTGATTTCTGAGAAAAGCTTGCTTTCACCTCACTTTTCTCGCTTGCCTGGAATTTGGAATATTTTCTACTTTGAACAGTACGTACTGCGGTATTGGGATTGCTGGCAGATTTTTCACTTTTCCGGTGTTGAGAATCTTATTTCTATTTAATCGCGATTCTGGCTTTCAGTAACTTATCTGGATTAGTTTGCTTCTTAGTCTTAATTCAAGTAATTGAGCCGTCGGATTTCTGGGTATGTAGTGATTCAGGAATTTCCCTTTTCTCTTGTTGATCGAAGTTTCTATTGAAATTTGGATCTCATTTTCCTGCAATATATCCAACTGAATTTTGGGATCCTCGAGAATGTAGATGTTCTTGTTCTTCTATTCCATTTCACGCCTTCTCATATACTGTTGGTAGCTTTGATAAGGAAATTTGATGAATACTTTATATTTTACTTGGAAAATGTTTTTCTCCCTGATTTGTTTGTTTGATGCTGATATATATATATATATGTGTGTGTGTGTGTATTAATGGATTGACCTTAGGCTCTTGGTTGTATGACCCAGCAAGTGGATGAACAGAAGTTGATAGGTGATCTTCTGTCACCATTTTTTTTTTCTTTGATAGATATTTTTAGTCTTACATAACAAATAATATTTTCTTTGTTATATGTTGGCAAGTGCATCTATTAGATCGATCAGGAAATGGGCACGTAGAATTGAACCATTTTTTAAAAAATTATTGGTTTCAGAGTTTTGTTTGCAGGCTCTTCTTCTACATTCTCGGAAATCTGATATTACACTGGGGCCTTGTTCTTTTTTTAGTTTTAGAGTTAATGTATTAATCAAAAGCTTTGTCCTGAGTGTATTCTAAGCATGATGATCATTAGTGACCTCGTTTCCACTTATAGAGGTGAGGGTAAATGGTTTATATACGTTCTATTTGATGTCAGATCGAAATGGGCATTTACCTCAGCAATCCTAAAACTGAGAAGGCCTCTGAAGATGGTGAAAATAGTCGTCTTAGATTTGGACTATCGTCCATGCAAGGATGGCGTGCCACAATGGAAGATGCTGTAAGTAATCAATGAAATGGCTGTACTCTTTGTCTGATTGATAAGAGCTCAATTAAGTTTCTTCTTTTCAAAATTTTGCAATTTCTGTTGCAATGATATTTTCTATTCATTGCTTTGTAGCATGCTGCAATTCCTGATCTGGATGCTTGCACTTCCTTCTTTGGCGTTTATGATGGCCATGGAGGTAAAATGCATGTGTGCTTTTGAGTGTTGGATTCTTCTTAATATGTGGGGTATAAGTTTTCTTCTGTTTTGGATGTGCTTGTTCGATTCTTATGCTACAATTATGAGTAATGTGTCTGGAAAAAAAAATGAAAATATCGTTTCATATATTCTATTGACAGTAAGTTGAGCGCATTGAGAAAATTTAGCTTCGGTTTTTATTTGTAGCATTTTTGGACCTACTGAAATTAAATAACTATATGAAAGGGACTATTCAAAAGAAATCCAATCCAGAAGAAAAGCAACAAATTTGA

mRNA sequence

ATGGCTCACCACCATAGCCAAGTCATTTGTACTATTGGAACCGTGTGCTACAGTAAATCGAGTGCTTTTTCATGGTGGATTTCTAGTTGTTGGCTGGCCATGGCTATGAGAAGGAATGAGAAAAAGGCTCTTCTTCTACATTCTCGGAAATCTGATATTACACTGGGGCCTTGTTCTTTTTTTAGTTTTAGAGTTAATATCGAAATGGGCATTTACCTCAGCAATCCTAAAACTGAGAAGGCCTCTGAAGATGGTGAAAATAGTCGTCTTAGATTTGGACTATCGTCCATGCAAGGATGGCGTGCCACAATGGAAGATGCTCATGCTGCAATTCCTGATCTGGATGCTTGCACTTCCTTCTTTGGCGTTTATGATGGCCATGGAGCATTTTTGGACCTACTGAAATTAAATAACTATATGAAAGGGACTATTCAAAAGAAATCCAATCCAGAAGAAAAGCAACAAATTTGA

Coding sequence (CDS)

ATGGCTCACCACCATAGCCAAGTCATTTGTACTATTGGAACCGTGTGCTACAGTAAATCGAGTGCTTTTTCATGGTGGATTTCTAGTTGTTGGCTGGCCATGGCTATGAGAAGGAATGAGAAAAAGGCTCTTCTTCTACATTCTCGGAAATCTGATATTACACTGGGGCCTTGTTCTTTTTTTAGTTTTAGAGTTAATATCGAAATGGGCATTTACCTCAGCAATCCTAAAACTGAGAAGGCCTCTGAAGATGGTGAAAATAGTCGTCTTAGATTTGGACTATCGTCCATGCAAGGATGGCGTGCCACAATGGAAGATGCTCATGCTGCAATTCCTGATCTGGATGCTTGCACTTCCTTCTTTGGCGTTTATGATGGCCATGGAGCATTTTTGGACCTACTGAAATTAAATAACTATATGAAAGGGACTATTCAAAAGAAATCCAATCCAGAAGAAAAGCAACAAATTTGA

Homology

[Close]

BLAST of CmoCh01G017240 vs. Swiss-Prot
Match: P2C21_ARATH (Probable protein phosphatase 2C 21 OS=Arabidopsis thaliana GN=PPC4-2 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.1e-23
Identity = 52/60 (86.67%), Postives = 54/60 (90.00%), Query Frame = 1


Query: 69  MGIYLSNPKTEKASEDGENSRLRFGLSSMQGWRATMEDAHAAIPDLDACTSFFGVYDGHG 128
           MG YLS+PKTEK SEDGEN +LRFGLSSMQGWRATMEDAHAAI DLD  TSFFGVYDGHG
Sbjct: 1   MGTYLSSPKTEKLSEDGENDKLRFGLSSMQGWRATMEDAHAAILDLDDKTSFFGVYDGHG 60

[Close]

BLAST of CmoCh01G017240 vs. Swiss-Prot
Match: P2C58_ORYSJ (Probable protein phosphatase 2C 58 OS=Oryza sativa subsp. japonica GN=Os06g0651600 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.0e-22
Identity = 47/60 (78.33%), Postives = 54/60 (90.00%), Query Frame = 1


Query: 69  MGIYLSNPKTEKASEDGENSRLRFGLSSMQGWRATMEDAHAAIPDLDACTSFFGVYDGHG 128
           MG+YLS PKTEK SEDGEN +L+FGLSSMQGWRATMEDAH+A+ D+D  TSFFGV+DGHG
Sbjct: 1   MGVYLSTPKTEKLSEDGENDKLKFGLSSMQGWRATMEDAHSALLDIDNDTSFFGVFDGHG 60

[Close]

BLAST of CmoCh01G017240 vs. Swiss-Prot
Match: P2C70_ORYSJ (Probable protein phosphatase 2C 70 OS=Oryza sativa subsp. japonica GN=Os09g0558000 PE=2 SV=2)

HSP 1 Score: 104.8 bits (260), Expect = 9.0e-22
Identity = 46/60 (76.67%), Postives = 51/60 (85.00%), Query Frame = 1


Query: 69  MGIYLSNPKTEKASEDGENSRLRFGLSSMQGWRATMEDAHAAIPDLDACTSFFGVYDGHG 128
           MG+YLS PKTEK S +G N RLR+GL+SMQGWR TMEDAH A+P LD CTSFFGVYDGHG
Sbjct: 1   MGVYLSTPKTEKYSGEGGNDRLRYGLASMQGWRTTMEDAHTALPRLDECTSFFGVYDGHG 60

[Close]

BLAST of CmoCh01G017240 vs. Swiss-Prot
Match: P2C60_ARATH (Probable protein phosphatase 2C 60 OS=Arabidopsis thaliana GN=At4g31860 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 9.0e-22
Identity = 49/60 (81.67%), Postives = 53/60 (88.33%), Query Frame = 1


Query: 69  MGIYLSNPKTEKASEDGENSRLRFGLSSMQGWRATMEDAHAAIPDLDACTSFFGVYDGHG 128
           MGIYLS PKT+K SEDGEN +LR+GLSSMQGWRA+MEDAHAAI DLD  TSF GVYDGHG
Sbjct: 1   MGIYLSTPKTDKFSEDGENHKLRYGLSSMQGWRASMEDAHAAILDLDDNTSFLGVYDGHG 60

[Close]

BLAST of CmoCh01G017240 vs. Swiss-Prot
Match: P2C11_ORYSJ (Probable protein phosphatase 2C 11 OS=Oryza sativa subsp. japonica GN=Os02g0180000 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 4.9e-20
Identity = 45/60 (75.00%), Postives = 52/60 (86.67%), Query Frame = 1


Query: 69  MGIYLSNPKTEKASEDGENSRLRFGLSSMQGWRATMEDAHAAIPDLDACTSFFGVYDGHG 128
           MGIYLS PKT+K SEDGEN +L+ GLSSMQGWRA MEDAH+A+ +LD  TSFFGV+DGHG
Sbjct: 1   MGIYLSTPKTDKFSEDGENDKLKLGLSSMQGWRANMEDAHSALLNLDNETSFFGVFDGHG 60

[Close]

BLAST of CmoCh01G017240 vs. TrEMBL
Match: M0T3Z7_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.3e-24
Identity = 55/62 (88.71%), Postives = 58/62 (93.55%), Query Frame = 1


Query: 67  IEMGIYLSNPKTEKASEDGENSRLRFGLSSMQGWRATMEDAHAAIPDLDACTSFFGVYDG 126
           I MGIYLS+PKTEK SEDG N+RLRFGLSSMQGWRATMEDAHAA+PDLD CTSFFGVYDG
Sbjct: 112 ISMGIYLSSPKTEKFSEDGANARLRFGLSSMQGWRATMEDAHAAVPDLDNCTSFFGVYDG 171

Query: 127 HG 129
           HG
Sbjct: 172 HG 173

[Close]

BLAST of CmoCh01G017240 vs. TrEMBL
Match: A0A0A0L0C2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G651860 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.3e-24
Identity = 55/60 (91.67%), Postives = 58/60 (96.67%), Query Frame = 1


Query: 69  MGIYLSNPKTEKASEDGENSRLRFGLSSMQGWRATMEDAHAAIPDLDACTSFFGVYDGHG 128
           MGIYLSNPKTEK+SEDGEN RLR+GLSSMQGWRATMEDAHAA+PDLDA TSFFGVYDGHG
Sbjct: 1   MGIYLSNPKTEKSSEDGENRRLRYGLSSMQGWRATMEDAHAAVPDLDASTSFFGVYDGHG 60

[Close]

BLAST of CmoCh01G017240 vs. TrEMBL
Match: F6H341_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g06720 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 6.7e-24
Identity = 54/62 (87.10%), Postives = 57/62 (91.94%), Query Frame = 1


Query: 67  IEMGIYLSNPKTEKASEDGENSRLRFGLSSMQGWRATMEDAHAAIPDLDACTSFFGVYDG 126
           +EMGIYLS PKTEK SEDGEN R+R+GLSSMQGWRATMEDAHAA PDLDA TSFFGVYDG
Sbjct: 35  LEMGIYLSTPKTEKLSEDGENGRVRYGLSSMQGWRATMEDAHAAYPDLDASTSFFGVYDG 94

Query: 127 HG 129
           HG
Sbjct: 95  HG 96

[Close]

BLAST of CmoCh01G017240 vs. TrEMBL
Match: M0SNE3_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 8.7e-24
Identity = 54/60 (90.00%), Postives = 56/60 (93.33%), Query Frame = 1


Query: 69  MGIYLSNPKTEKASEDGENSRLRFGLSSMQGWRATMEDAHAAIPDLDACTSFFGVYDGHG 128
           MGIYLS PKTEK SEDGE+ RLRFGLSSMQGWRATMEDAHAA+PDLD CTSFFGVYDGHG
Sbjct: 1   MGIYLSTPKTEKFSEDGESDRLRFGLSSMQGWRATMEDAHAALPDLDDCTSFFGVYDGHG 60

[Close]

BLAST of CmoCh01G017240 vs. TrEMBL
Match: B9RNU7_RICCO (Protein phosphatase 2c, putative OS=Ricinus communis GN=RCOM_0920800 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.5e-23
Identity = 53/60 (88.33%), Postives = 57/60 (95.00%), Query Frame = 1


Query: 69  MGIYLSNPKTEKASEDGENSRLRFGLSSMQGWRATMEDAHAAIPDLDACTSFFGVYDGHG 128
           MG+YLS PKTEK+SEDGE+ RLRFGLSSMQGWRATMEDAHAA+PDLDA TSFFGVYDGHG
Sbjct: 1   MGVYLSTPKTEKSSEDGESDRLRFGLSSMQGWRATMEDAHAALPDLDASTSFFGVYDGHG 60

[Close]

BLAST of CmoCh01G017240 vs. TAIR10
Match: AT2G25070.1 (AT2G25070.1 Protein phosphatase 2C family protein)

HSP 1 Score: 110.2 bits (274), Expect = 1.2e-24
Identity = 52/60 (86.67%), Postives = 54/60 (90.00%), Query Frame = 1


Query: 69  MGIYLSNPKTEKASEDGENSRLRFGLSSMQGWRATMEDAHAAIPDLDACTSFFGVYDGHG 128
           MG YLS+PKTEK SEDGEN +LRFGLSSMQGWRATMEDAHAAI DLD  TSFFGVYDGHG
Sbjct: 1   MGTYLSSPKTEKLSEDGENDKLRFGLSSMQGWRATMEDAHAAILDLDDKTSFFGVYDGHG 60

[Close]

BLAST of CmoCh01G017240 vs. TAIR10
Match: AT4G31860.1 (AT4G31860.1 Protein phosphatase 2C family protein)

HSP 1 Score: 104.8 bits (260), Expect = 5.0e-23
Identity = 49/60 (81.67%), Postives = 53/60 (88.33%), Query Frame = 1


Query: 69  MGIYLSNPKTEKASEDGENSRLRFGLSSMQGWRATMEDAHAAIPDLDACTSFFGVYDGHG 128
           MGIYLS PKT+K SEDGEN +LR+GLSSMQGWRA+MEDAHAAI DLD  TSF GVYDGHG
Sbjct: 1   MGIYLSTPKTDKFSEDGENHKLRYGLSSMQGWRASMEDAHAAILDLDDNTSFLGVYDGHG 60

[Close]

BLAST of CmoCh01G017240 vs. NCBI nr
Match: gi|659104191|ref|XP_008452838.1| (PREDICTED: probable protein phosphatase 2C 21 [Cucumis melo])

HSP 1 Score: 125.2 bits (313), Expect = 1.0e-25
Identity = 56/60 (93.33%), Postives = 59/60 (98.33%), Query Frame = 1


Query: 69  MGIYLSNPKTEKASEDGENSRLRFGLSSMQGWRATMEDAHAAIPDLDACTSFFGVYDGHG 128
           MGIYLSNPKTEK+SEDGEN RLR+GLSSMQGWRATMEDAHAA+PDLDACTSFFGVYDGHG
Sbjct: 1   MGIYLSNPKTEKSSEDGENQRLRYGLSSMQGWRATMEDAHAAVPDLDACTSFFGVYDGHG 60

[Close]

BLAST of CmoCh01G017240 vs. NCBI nr
Match: gi|449455509|ref|XP_004145495.1| (PREDICTED: probable protein phosphatase 2C 60 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 1.9e-24
Identity = 55/60 (91.67%), Postives = 58/60 (96.67%), Query Frame = 1


Query: 69  MGIYLSNPKTEKASEDGENSRLRFGLSSMQGWRATMEDAHAAIPDLDACTSFFGVYDGHG 128
           MGIYLSNPKTEK+SEDGEN RLR+GLSSMQGWRATMEDAHAA+PDLDA TSFFGVYDGHG
Sbjct: 1   MGIYLSNPKTEKSSEDGENRRLRYGLSSMQGWRATMEDAHAAVPDLDASTSFFGVYDGHG 60

[Close]

BLAST of CmoCh01G017240 vs. NCBI nr
Match: gi|743807057|ref|XP_010927952.1| (PREDICTED: probable protein phosphatase 2C 11 [Elaeis guineensis])

HSP 1 Score: 120.2 bits (300), Expect = 3.3e-24
Identity = 55/60 (91.67%), Postives = 56/60 (93.33%), Query Frame = 1


Query: 69  MGIYLSNPKTEKASEDGENSRLRFGLSSMQGWRATMEDAHAAIPDLDACTSFFGVYDGHG 128
           MGIYLS PKTEK SEDGEN RLRFGLSSMQGWRATMEDAHAA+PDLD CTSFFGVYDGHG
Sbjct: 1   MGIYLSTPKTEKFSEDGENDRLRFGLSSMQGWRATMEDAHAALPDLDDCTSFFGVYDGHG 60

[Close]

BLAST of CmoCh01G017240 vs. NCBI nr
Match: gi|695031620|ref|XP_009403332.1| (PREDICTED: probable protein phosphatase 2C 11 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 119.0 bits (297), Expect = 7.3e-24
Identity = 54/60 (90.00%), Postives = 57/60 (95.00%), Query Frame = 1


Query: 69  MGIYLSNPKTEKASEDGENSRLRFGLSSMQGWRATMEDAHAAIPDLDACTSFFGVYDGHG 128
           MGIYLS+PKTEK SEDG N+RLRFGLSSMQGWRATMEDAHAA+PDLD CTSFFGVYDGHG
Sbjct: 1   MGIYLSSPKTEKFSEDGANARLRFGLSSMQGWRATMEDAHAAVPDLDNCTSFFGVYDGHG 60

[Close]

BLAST of CmoCh01G017240 vs. NCBI nr
Match: gi|695018562|ref|XP_009396250.1| (PREDICTED: probable protein phosphatase 2C 11 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-23
Identity = 54/60 (90.00%), Postives = 56/60 (93.33%), Query Frame = 1


Query: 69  MGIYLSNPKTEKASEDGENSRLRFGLSSMQGWRATMEDAHAAIPDLDACTSFFGVYDGHG 128
           MGIYLS PKTEK SEDGE+ RLRFGLSSMQGWRATMEDAHAA+PDLD CTSFFGVYDGHG
Sbjct: 1   MGIYLSTPKTEKFSEDGESDRLRFGLSSMQGWRATMEDAHAALPDLDDCTSFFGVYDGHG 60

The following BLAST results are available for this feature:

BLAST of CmoCh01G017240 vs. Swiss-Prot


Match Name	E-value	Identity	Description
P2C21_ARATH	2.1e-23	86.67	Probable protein phosphatase 2C 21 OS=Arabidopsis thaliana GN=PPC4-2 PE=1 SV=1	[more]
P2C58_ORYSJ	4.0e-22	78.33	Probable protein phosphatase 2C 58 OS=Oryza sativa subsp. japonica GN=Os06g06516...	[more]
P2C70_ORYSJ	9.0e-22	76.67	Probable protein phosphatase 2C 70 OS=Oryza sativa subsp. japonica GN=Os09g05580...	[more]
P2C60_ARATH	9.0e-22	81.67	Probable protein phosphatase 2C 60 OS=Arabidopsis thaliana GN=At4g31860 PE=2 SV=...	[more]
P2C11_ORYSJ	4.9e-20	75.00	Probable protein phosphatase 2C 11 OS=Oryza sativa subsp. japonica GN=Os02g01800...	[more]

BLAST of CmoCh01G017240 vs. TrEMBL


Match Name	E-value	Identity	Description
M0T3Z7_MUSAM	1.3e-24	88.71	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1	[more]
A0A0A0L0C2_CUCSA	1.3e-24	91.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G651860 PE=3 SV=1	[more]
F6H341_VITVI	6.7e-24	87.10	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g06720 PE=3 SV=...	[more]
M0SNE3_MUSAM	8.7e-24	90.00	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1	[more]
B9RNU7_RICCO	1.5e-23	88.33	Protein phosphatase 2c, putative OS=Ricinus communis GN=RCOM_0920800 PE=3 SV=1	[more]

BLAST of CmoCh01G017240 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G25070.1	1.2e-24	86.67	Protein phosphatase 2C family protein	[more]
AT4G31860.1	5.0e-23	81.67	Protein phosphatase 2C family protein	[more]

BLAST of CmoCh01G017240 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659104191\|ref\|XP_008452838.1\|	1.0e-25	93.33	PREDICTED: probable protein phosphatase 2C 21 [Cucumis melo]	[more]
gi\|449455509\|ref\|XP_004145495.1\|	1.9e-24	91.67	PREDICTED: probable protein phosphatase 2C 60 [Cucumis sativus]	[more]
gi\|743807057\|ref\|XP_010927952.1\|	3.3e-24	91.67	PREDICTED: probable protein phosphatase 2C 11 [Elaeis guineensis]	[more]
gi\|695031620\|ref\|XP_009403332.1\|	7.3e-24	90.00	PREDICTED: probable protein phosphatase 2C 11 [Musa acuminata subsp. malaccensis...	[more]
gi\|695018562\|ref\|XP_009396250.1\|	1.2e-23	90.00	PREDICTED: probable protein phosphatase 2C 11 [Musa acuminata subsp. malaccensis...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000222	PP2C_BS
IPR001932	PPM-type_phosphatase_dom
IPR015655	PP2C

Vocabulary: **Molecular Function**
Term	Definition
GO:0043169	cation binding
GO:0003824	catalytic activity
GO:0004722	protein serine/threonine phosphatase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006470	protein dephosphorylation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006470	protein dephosphorylation
cellular_component	GO:0008287	protein serine/threonine phosphatase complex
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004722	protein serine/threonine phosphatase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0043169	cation binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G017240.1	CmoCh01G017240.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000222	PPM-type phosphatase, divalent cation binding	PROSITE	PS01032	PPM_1	coord: 120..128 scor
IPR001932	PPM-type phosphatase domain	GENE3D	G3DSA:3.60.40.10		coord: 64..128 score: 7.7
IPR001932	PPM-type phosphatase domain	PFAM	PF00481	PP2C	coord: 91..130 score: 1.
IPR001932	PPM-type phosphatase domain	unknown	SSF81606	PP2C-like	coord: 71..129 score: 6.54
IPR015655	Protein phosphatase 2C family	PANTHER	PTHR13832	PROTEIN PHOSPHATASE 2C	coord: 64..128 score: 2.5
None	No IPR available	PANTHER	PTHR13832:SF356	SUBFAMILY NOT NAMED	coord: 64..128 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G017240	Wild cucumber (PI 183967)	cmocpiB467
CmoCh01G017240	Cucumber (Chinese Long) v2	cmocuB463
CmoCh01G017240	Melon (DHL92) v3.5.1	cmomeB424
CmoCh01G017240	Watermelon (Charleston Gray)	cmowcgB413
CmoCh01G017240	Watermelon (Charleston Gray)	cmowcgB421
CmoCh01G017240	Watermelon (Charleston Gray)	cmowcgB433
CmoCh01G017240	Watermelon (97103) v1	cmowmB435
CmoCh01G017240	Watermelon (97103) v1	cmowmB460
CmoCh01G017240	Cucurbita pepo (Zucchini)	cmocpeB467
CmoCh01G017240	Cucurbita pepo (Zucchini)	cmocpeB448
CmoCh01G017240	Bottle gourd (USVL1VR-Ls)	cmolsiB416
CmoCh01G017240	Bottle gourd (USVL1VR-Ls)	cmolsiB425
CmoCh01G017240	Cucumber (Gy14) v2	cgybcmoB486
CmoCh01G017240	Melon (DHL92) v3.6.1	cmomedB488
CmoCh01G017240	Silver-seed gourd	carcmoB0874
CmoCh01G017240	Silver-seed gourd	carcmoB1045
CmoCh01G017240	Cucumber (Chinese Long) v3	cmocucB0553
CmoCh01G017240	Watermelon (97103) v2	cmowmbB462
CmoCh01G017240	Watermelon (97103) v2	cmowmbB471
CmoCh01G017240	Wax gourd	cmowgoB0601
CmoCh01G017240	Wax gourd	cmowgoB0634
CmoCh01G017240	Cucurbita moschata (Rifu)	cmocmoB020
CmoCh01G017240	Cucumber (Gy14) v1	cgycmoB0748
CmoCh01G017240	Cucurbita maxima (Rimu)	cmacmoB050
CmoCh01G017240	Cucurbita maxima (Rimu)	cmacmoB468