CmoCh01G016510 (gene) Cucurbita moschata (Rifu)

NameCmoCh01G016510
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionBlue-light photoreceptor
LocationCmo_Chr01 : 12513159 .. 12517001 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGTAATATGATTCTATTTCTCTCTCGTTTTTCTAGGTTAATTCTCTTGAAAAATCGACCAGTTGTTAGGAAAATAAATAAATAAATAAATAAAATATAAGGTAAAGAAATAATTAAAAAACTGTGAGTCTCAGAGAGGAGAGAGAAAGAAGAGAGAGAGATGGATATGGTTCATTGGTGAGTGAGAGAAACAAGGGTACGTGTTTTCTGGGGCGTTTTGTGTTGTGAGATGTCAGGTGGCGGTTGCAGCATAGTTTGGTTCAGAAGAGATCTCAGGGTTGAAGATAACCCAGCTCTCACCGCCGCCGTTAGGGCTGGCGCCGTCGTCGCCGTCTTCATCTGGGCGCCGGAGGAAGAAGGTCACTACTATCCTGGCCGAGTCTCGCGATGGTGGCTCAAACAGAGCTTAGCGCATCTCGATTCTTCGCTTAGAAGCCTCGGCGCTTATCTTGTCACTAAGAGATCCACCAACACCATTTCTACTTTGCTCGATGTCGTTAAAGCCACCGGCGCTTCTCAGCTCTTCTTCAATCACTTATACGGTCTGTTCTTCTTCCATTTCTTAATCCTTCTTTGAATCGGTCGCTTAATTTCTCCGTTAGGGTTATTGGAATTGATTTGTTCGTAAGGTTTCTGGTAAACCCCTTTTTGATTTGGTTTAATTTGCCATTGTTGCTGTAAAATTGTGTTCTCAGACTAGTTTTGTAAGTGTTTAAGCTCTCTTAAAGGGTCCTAAAATGGCTGTGAATCGAATCTCTCTGATAATTTGGGTGTCTTATGGAGTTCTTCATGTTTGTTAGATCCTTTGTCGCTTATTCGTGATCATCGAGCAAAGGAGGTTTTATCTGCGCAAGGCATCGGCGTGAGGTCTTACAATGCCGATTTGCTGTACGAGCCGTGGGACGTTAAGGATGTCGATGGCAATCCGTTTACGACGTTTGCCGGGTTCTGGGAAAGATGTCTTAGCATGCCTTGTGATCCAGAGGCACCTCTTCTCCCACCTAAGAGAATCATTTCAGGTTGCTTTTTCTTTGTGTTTACTTCAAAGATTTGTTTCCCTTATCGAGTATTTGATGGATTCGTAACGTTCTAGCTGTTGTGGTTGTTCGTCGTGACGGTTTTCGTAAGAGAGAACCTCTGCTCATCCGTTTTGATTTCAGTCAAGAGTTTCACGAAACTGATTACTTCACAACCGTCTATCCATTTTCTTAGTTTAGTTTTCCTGTTATGTCTTGCTATCTATCGTAATATGTTACTGTGTTCCACGAGCCTCCTTGGTTCCTTAAGTCACCATTTAGGAGTCGATGTTGAGTTTTCGAGGATCTGTTGAGGTAGAGACTCAAGGAACCAAGTGTTCTTTAGGTACCCCAAAGTTGCTTAGTTTCATTTGTTACGTGTTTTAGGTGGCTCGTATAGGGCGTATTATCGTGTTGGTGTGCATAGACATAGAACAGCGTTTGAGAACACGAGCCTTCATGCTAGGAGATGGTTACTTGCAAACTAGTAGATCATGAAGAGATTTTTCTTGTGAGATCCCACATCGGTTGGAGAGGGAAACGAAGCATTCAGGTGTGGAAACCTCTCCCTAGTAGACATGTTTTGAAAATCGTAAGGCTGATGGCAATACGTAGGGCCGAAATAGACAATATCTGCTAGCGGTGGGCTTAAGAGTAAACTCTTTTGATATTATTGGGCATAATGGCATATTGTGGAACTTAAGAACTTGAGGACGTAGTAGTACGACCTACCGAACAGATTGTGTTCACCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCTCCCTTTAAGACGTATGCTTTACTCAAAGTGTTGTCTTTGCTCGTCCAGGTGATGCATCGAGGTGCCCAAGCGACACGTTGGTATTTGAAGACGAATTGGAGAAGGGAAGCAACGCACTTCTCGCCCGAGCATGGTCTCCTGGATGGAGCAATGCAGATAAGGCTTTAACCACGTTCATTAATGGACCGTTGATCGAGTACTCAAAAAACCGTAGGAAGGCGGATAGTGCAACCACCTCGTTTCTGTCTCCTCACTTGCATTTCGGGGAGGTAAGCGTGCGAAAAGTGTTTCATCTCGTTCGAATGAAGCAGGTTTTATGGGCGAATGAAGGAAACGAGGTCGGTGAAGAGAGTGTCAACTTGTTTCTCAAATCTATTGGCCTAAGAGAATACTCAAGATACATGAGTTTCAACCATCCGTACAGCCATGAAAGGCCACTTCTTGGACACCTTAAATTCTTCCCTTGGGTTGTGGAGGAAGGCTATTTTAAGGCATGGAGGCAAGGAAGAACCGGTTATCCATTAGTCGATGCTGGTATGAGGGAATTGTGGGCGACTGGGTGGCTGCACGATCGGATCCGAGTCGTCGTTTCTAGCTTCTTTGTGAAGGTTCTGCAACTTCCGTGGAGATGGGGAATGAAGTATTTCTGGGATACGCTCTTGGATGCAGATCTCGAAAGCGATGCTCTTGGTTGGCAATACATATCTGGCACACTTCCCGACAGTCGGGAATTTGATCGTATCGACAATCCACAGGTGCGCACACCTTTGGCGTTCTTCCTCTTTGTGCAAAAAGGTTTCTTATGGAGCGTTTTAGACATGAAGCTTTCTAAAAATGGTCTTGTTTTAATATCTGCAATGTGTTTCTGGATGTAATTATCTGTACTAATACTTGGTTTTGTACAGCTCGAGGGTTATAAGTTCGATCCGTACGGAGAATACGTCCGGAGATGGCTTCCTGAACTTTCTAGATTACCAACTGAATGGATCCATCATCCATGGAATGCACCAGAGTCTGTACTCCAAGCTGCTGGGATCGAGCTCGGATCGAACTACCCTCTTCCCATTGTAGGATTGGATGCAGCTAAGGCTCGGCTGGAAGAAGCGCTGTCGGAGATGTGGCAACAAGAAGCAGCTTCAAGAGCTGTGATCGAGAATGGAACTGAAGAGGGACTCGGAGACTCATCCGAGTCGATCCCAATTGCATTTCCTCAGGACATAGCCATGGAGGATGAAGACCTTGAGCCTGCTAGGATGAATGCTCATACAATTCGGTGCTTCGAGGATCAGATGGTACCGAGCATGACGAGTTCGGTGAGATTAGAAGACGACCATTCTTTGAATTCAATGAACATTCGAAGTACAGCAGAAGATGGTAGAGCAGAAGTACCAACAGATCTAAATCTAAACCAAGAGCCAACAAGAGATGCAAATCGCAGAGTTCAACCGACTGCTCCGATGAACGCTCGACTTCCATATACTGCAGGTATAGGCTTAAGAAGTGGTGCTGAAGACTCCACTGCAGAGTCTTTTTCGAGTAGCGATAGTCGAAGAGAAAGAGACGGCGGTGTGGTTCCGGTTTGGTCTCCACCAAGTTCGAGTTACGGCGAGCAGTTTGTGGTCGATGAAAACGGCATTGGAACAAGCTCTTCGTTCTTGCAGGGGCATCAACAGACTCATCAAATAATCAATTGGAGGCGGCTATCTCAAACCGGGTAA

mRNA sequence

TTTGTAATATGATTCTATTTCTCTCTCGTTTTTCTAGGTTAATTCTCTTGAAAAATCGACCAGTTGTTAGGAAAATAAATAAATAAATAAATAAAATATAAGGTAAAGAAATAATTAAAAAACTGTGAGTCTCAGAGAGGAGAGAGAAAGAAGAGAGAGAGATGGATATGGTTCATTGGTGAGTGAGAGAAACAAGGGTACGTGTTTTCTGGGGCGTTTTGTGTTGTGAGATGTCAGGTGGCGGTTGCAGCATAGTTTGGTTCAGAAGAGATCTCAGGGTTGAAGATAACCCAGCTCTCACCGCCGCCGTTAGGGCTGGCGCCGTCGTCGCCGTCTTCATCTGGGCGCCGGAGGAAGAAGGTCACTACTATCCTGGCCGAGTCTCGCGATGGTGGCTCAAACAGAGCTTAGCGCATCTCGATTCTTCGCTTAGAAGCCTCGGCGCTTATCTTGTCACTAAGAGATCCACCAACACCATTTCTACTTTGCTCGATGTCGTTAAAGCCACCGGCGCTTCTCAGCTCTTCTTCAATCACTTATACGATCCTTTGTCGCTTATTCGTGATCATCGAGCAAAGGAGGTTTTATCTGCGCAAGGCATCGGCGTGAGGTCTTACAATGCCGATTTGCTGTACGAGCCGTGGGACGTTAAGGATGTCGATGGCAATCCGTTTACGACGTTTGCCGGGTTCTGGGAAAGATGTCTTAGCATGCCTTGTGATCCAGAGGCACCTCTTCTCCCACCTAAGAGAATCATTTCAGGTGATGCATCGAGGTGCCCAAGCGACACGTTGGTATTTGAAGACGAATTGGAGAAGGGAAGCAACGCACTTCTCGCCCGAGCATGGTCTCCTGGATGGAGCAATGCAGATAAGGCTTTAACCACGTTCATTAATGGACCGTTGATCGAGTACTCAAAAAACCGTAGGAAGGCGGATAGTGCAACCACCTCGTTTCTGTCTCCTCACTTGCATTTCGGGGAGGTAAGCGTGCGAAAAGTGTTTCATCTCGTTCGAATGAAGCAGGTTTTATGGGCGAATGAAGGAAACGAGGTCGGTGAAGAGAGTGTCAACTTGTTTCTCAAATCTATTGGCCTAAGAGAATACTCAAGATACATGAGTTTCAACCATCCGTACAGCCATGAAAGGCCACTTCTTGGACACCTTAAATTCTTCCCTTGGGTTGTGGAGGAAGGCTATTTTAAGGCATGGAGGCAAGGAAGAACCGGTTATCCATTAGTCGATGCTGGTATGAGGGAATTGTGGGCGACTGGGTGGCTGCACGATCGGATCCGAGTCGTCGTTTCTAGCTTCTTTGTGAAGGTTCTGCAACTTCCGTGGAGATGGGGAATGAAGTATTTCTGGGATACGCTCTTGGATGCAGATCTCGAAAGCGATGCTCTTGGTTGGCAATACATATCTGGCACACTTCCCGACAGTCGGGAATTTGATCGTATCGACAATCCACAGCTCGAGGGTTATAAGTTCGATCCGTACGGAGAATACGTCCGGAGATGGCTTCCTGAACTTTCTAGATTACCAACTGAATGGATCCATCATCCATGGAATGCACCAGAGTCTGTACTCCAAGCTGCTGGGATCGAGCTCGGATCGAACTACCCTCTTCCCATTGTAGGATTGGATGCAGCTAAGGCTCGGCTGGAAGAAGCGCTGTCGGAGATGTGGCAACAAGAAGCAGCTTCAAGAGCTGTGATCGAGAATGGAACTGAAGAGGGACTCGGAGACTCATCCGAGTCGATCCCAATTGCATTTCCTCAGGACATAGCCATGGAGGATGAAGACCTTGAGCCTGCTAGGATGAATGCTCATACAATTCGGTGCTTCGAGGATCAGATGGTACCGAGCATGACGAGTTCGGTGAGATTAGAAGACGACCATTCTTTGAATTCAATGAACATTCGAAGTACAGCAGAAGATGGTAGAGCAGAAGTACCAACAGATCTAAATCTAAACCAAGAGCCAACAAGAGATGCAAATCGCAGAGTTCAACCGACTGCTCCGATGAACGCTCGACTTCCATATACTGCAGGTATAGGCTTAAGAAGTGGTGCTGAAGACTCCACTGCAGAGTCTTTTTCGAGTAGCGATAGTCGAAGAGAAAGAGACGGCGGTGTGGTTCCGGTTTGGTCTCCACCAAGTTCGAGTTACGGCGAGCAGTTTGTGGTCGATGAAAACGGCATTGGAACAAGCTCTTCGTTCTTGCAGGGGCATCAACAGACTCATCAAATAATCAATTGGAGGCGGCTATCTCAAACCGGGTAA

Coding sequence (CDS)

ATGTCAGGTGGCGGTTGCAGCATAGTTTGGTTCAGAAGAGATCTCAGGGTTGAAGATAACCCAGCTCTCACCGCCGCCGTTAGGGCTGGCGCCGTCGTCGCCGTCTTCATCTGGGCGCCGGAGGAAGAAGGTCACTACTATCCTGGCCGAGTCTCGCGATGGTGGCTCAAACAGAGCTTAGCGCATCTCGATTCTTCGCTTAGAAGCCTCGGCGCTTATCTTGTCACTAAGAGATCCACCAACACCATTTCTACTTTGCTCGATGTCGTTAAAGCCACCGGCGCTTCTCAGCTCTTCTTCAATCACTTATACGATCCTTTGTCGCTTATTCGTGATCATCGAGCAAAGGAGGTTTTATCTGCGCAAGGCATCGGCGTGAGGTCTTACAATGCCGATTTGCTGTACGAGCCGTGGGACGTTAAGGATGTCGATGGCAATCCGTTTACGACGTTTGCCGGGTTCTGGGAAAGATGTCTTAGCATGCCTTGTGATCCAGAGGCACCTCTTCTCCCACCTAAGAGAATCATTTCAGGTGATGCATCGAGGTGCCCAAGCGACACGTTGGTATTTGAAGACGAATTGGAGAAGGGAAGCAACGCACTTCTCGCCCGAGCATGGTCTCCTGGATGGAGCAATGCAGATAAGGCTTTAACCACGTTCATTAATGGACCGTTGATCGAGTACTCAAAAAACCGTAGGAAGGCGGATAGTGCAACCACCTCGTTTCTGTCTCCTCACTTGCATTTCGGGGAGGTAAGCGTGCGAAAAGTGTTTCATCTCGTTCGAATGAAGCAGGTTTTATGGGCGAATGAAGGAAACGAGGTCGGTGAAGAGAGTGTCAACTTGTTTCTCAAATCTATTGGCCTAAGAGAATACTCAAGATACATGAGTTTCAACCATCCGTACAGCCATGAAAGGCCACTTCTTGGACACCTTAAATTCTTCCCTTGGGTTGTGGAGGAAGGCTATTTTAAGGCATGGAGGCAAGGAAGAACCGGTTATCCATTAGTCGATGCTGGTATGAGGGAATTGTGGGCGACTGGGTGGCTGCACGATCGGATCCGAGTCGTCGTTTCTAGCTTCTTTGTGAAGGTTCTGCAACTTCCGTGGAGATGGGGAATGAAGTATTTCTGGGATACGCTCTTGGATGCAGATCTCGAAAGCGATGCTCTTGGTTGGCAATACATATCTGGCACACTTCCCGACAGTCGGGAATTTGATCGTATCGACAATCCACAGCTCGAGGGTTATAAGTTCGATCCGTACGGAGAATACGTCCGGAGATGGCTTCCTGAACTTTCTAGATTACCAACTGAATGGATCCATCATCCATGGAATGCACCAGAGTCTGTACTCCAAGCTGCTGGGATCGAGCTCGGATCGAACTACCCTCTTCCCATTGTAGGATTGGATGCAGCTAAGGCTCGGCTGGAAGAAGCGCTGTCGGAGATGTGGCAACAAGAAGCAGCTTCAAGAGCTGTGATCGAGAATGGAACTGAAGAGGGACTCGGAGACTCATCCGAGTCGATCCCAATTGCATTTCCTCAGGACATAGCCATGGAGGATGAAGACCTTGAGCCTGCTAGGATGAATGCTCATACAATTCGGTGCTTCGAGGATCAGATGGTACCGAGCATGACGAGTTCGGTGAGATTAGAAGACGACCATTCTTTGAATTCAATGAACATTCGAAGTACAGCAGAAGATGGTAGAGCAGAAGTACCAACAGATCTAAATCTAAACCAAGAGCCAACAAGAGATGCAAATCGCAGAGTTCAACCGACTGCTCCGATGAACGCTCGACTTCCATATACTGCAGGTATAGGCTTAAGAAGTGGTGCTGAAGACTCCACTGCAGAGTCTTTTTCGAGTAGCGATAGTCGAAGAGAAAGAGACGGCGGTGTGGTTCCGGTTTGGTCTCCACCAAGTTCGAGTTACGGCGAGCAGTTTGTGGTCGATGAAAACGGCATTGGAACAAGCTCTTCGTTCTTGCAGGGGCATCAACAGACTCATCAAATAATCAATTGGAGGCGGCTATCTCAAACCGGGTAA
BLAST of CmoCh01G016510 vs. Swiss-Prot
Match: CRY1_ARATH (Cryptochrome-1 OS=Arabidopsis thaliana GN=CRY1 PE=1 SV=2)

HSP 1 Score: 1075.1 bits (2779), Expect = 0.0e+00
Identity = 530/687 (77.15%), Postives = 589/687 (85.74%), Query Frame = 1

Query: 4   GGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSLAHL 63
           GGCSIVWFRRDLRVEDNPAL AAVRAG V+A+F+WAPEEEGHY+PGRVSRWWLK SLA L
Sbjct: 11  GGCSIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRWWLKNSLAQL 70

Query: 64  DSSLRSLGAYLVTKRSTNTISTLLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLSAQG 123
           DSSLRSLG  L+TKRST+++++LLDVVK+TGASQ+FFNHLYDPLSL+RDHRAK+VL+AQG
Sbjct: 71  DSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVRDHRAKDVLTAQG 130

Query: 124 IGVRSYNADLLYEPWDVKDVDGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDASRC 183
           I VRS+NADLLYEPW+V D  G PF+ FA FWERCLSMP DPE+PLLPPK+IISGD S+C
Sbjct: 131 IAVRSFNADLLYEPWEVTDELGRPFSMFAAFWERCLSMPYDPESPLLPPKKIISGDVSKC 190

Query: 184 PSDTLVFEDELEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATTSFL 243
            +D LVFED+ EKGSNALLARAWSPGWSN DKALTTFINGPL+EYSKNRRKADSATTSFL
Sbjct: 191 VADPLVFEDDSEKGSNALLARAWSPGWSNGDKALTTFINGPLLEYSKNRRKADSATTSFL 250

Query: 244 SPHLHFGEVSVRKVFHLVRMKQVLWANEGNEVGEESVNLFLKSIGLREYSRYMSFNHPYS 303
           SPHLHFGEVSVRKVFHLVR+KQV WANEGNE GEESVNLFLKSIGLREYSRY+SFNHPYS
Sbjct: 251 SPHLHFGEVSVRKVFHLVRIKQVAWANEGNEAGEESVNLFLKSIGLREYSRYISFNHPYS 310

Query: 304 HERPLLGHLKFFPWVVEEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFV 363
           HERPLLGHLKFFPW V+E YFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFV
Sbjct: 311 HERPLLGHLKFFPWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFV 370

Query: 364 KVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFDPYG 423
           KVLQLPWRWGMKYFWDTLLDADLESDALGWQYI+GTLPDSREFDRIDNPQ EGYKFDP G
Sbjct: 371 KVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRIDNPQFEGYKFDPNG 430

Query: 424 EYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSE 483
           EYVRRWLPELSRLPT+WIHHPWNAPESVLQAAGIELGSNYPLPIVGLD AKARL EALS+
Sbjct: 431 EYVRRWLPELSRLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDEAKARLHEALSQ 490

Query: 484 MWQQEAASRAVIENGTEEGLGDSS--ESIPIAFPQDIAMEDEDLEPARMNAHTIRCFEDQ 543
           MWQ EAASRA IENG+EEGLGDS+  E  PI FP+DI M  E+ EP R+N +  R +EDQ
Sbjct: 491 MWQLEAASRAAIENGSEEGLGDSAEVEEAPIEFPRDITM--EETEPTRLNPN--RRYEDQ 550

Query: 544 MVPSMTSSVRLEDDHSLNSMNIRSTAEDGRAEVPTDL-NLNQEPTRDANRRVQPTA-PMN 603
           MVPS+TSS+   ++   +S+N+R++  D RAEVP ++ N NQ       RR +P +  + 
Sbjct: 551 MVPSITSSLIRPEEDEESSLNLRNSVGDSRAEVPRNMVNTNQA----QQRRAEPASNQVT 610

Query: 604 ARLPYTAGIGLRSGAEDSTAESFSSSDSRRERDGGVVPVWSPPSSSYGEQFVVDENGIG- 663
           A +P      +    EDSTAE  SSS  RRER GG+VP WSP    Y EQF  +ENGIG 
Sbjct: 611 AMIPEFNIRIVAESTEDSTAE--SSSSGRRERSGGIVPEWSP---GYSEQFPSEENGIGG 670

Query: 664 --TSSSFLQGHQQTHQIINWRRLSQTG 684
             T+SS+LQ H   H+I+NWRRLSQTG
Sbjct: 671 GSTTSSYLQNH---HEILNWRRLSQTG 681

BLAST of CmoCh01G016510 vs. Swiss-Prot
Match: CRY2_ARATH (Cryptochrome-2 OS=Arabidopsis thaliana GN=CRY2 PE=1 SV=2)

HSP 1 Score: 661.8 bits (1706), Expect = 8.3e-189
Identity = 305/509 (59.92%), Postives = 384/509 (75.44%), Query Frame = 1

Query: 7   SIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSLAHLDSS 66
           +IVWFRRDLR+EDNPAL AA   G+V  VFIW PEEEG +YPGR SRWW+KQSLAHL  S
Sbjct: 7   TIVWFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQFYPGRASRWWMKQSLAHLSQS 66

Query: 67  LRSLGAYLVTKRSTNTISTLLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLSAQGIGV 126
           L++LG+ L   ++ NTIS +LD ++ TGA+++ FNHLYDP+SL+RDH  KE L  +GI V
Sbjct: 67  LKALGSDLTLIKTHNTISAILDCIRVTGATKVVFNHLYDPVSLVRDHTVKEKLVERGISV 126

Query: 127 RSYNADLLYEPWDVKDVDGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDASR---- 186
           +SYN DLLYEPW++    G PFT+F  +W++CL M  +    L PP R++   A+     
Sbjct: 127 QSYNGDLLYEPWEIYCEKGKPFTSFNSYWKKCLDMSIE-SVMLPPPWRLMPITAAAEAIW 186

Query: 187 -CPSDTLVFEDELEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATTS 246
            C  + L  E+E EK SNALL RAWSPGWSNADK L  FI   LI+Y+KN +K    +TS
Sbjct: 187 ACSIEELGLENEAEKPSNALLTRAWSPGWSNADKLLNEFIEKQLIDYAKNSKKVVGNSTS 246

Query: 247 FLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNEVGEESVNLFLKSIGLREYSRYMSFNHP 306
            LSP+LHFGE+SVR VF   RMKQ++WA + N  GEES +LFL+ IGLREYSRY+ FN P
Sbjct: 247 LLSPYLHFGEISVRHVFQCARMKQIIWARDKNSEGEESADLFLRGIGLREYSRYICFNFP 306

Query: 307 YSHERPLLGHLKFFPWVVEEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSF 366
           ++HE+ LL HL+FFPW  +   FKAWRQGRTGYPLVDAGMRELWATGW+H+RIRV+VSSF
Sbjct: 307 FTHEQSLLSHLRFFPWDADVDKFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSF 366

Query: 367 FVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFDP 426
            VK L LPW+WGMKYFWDTLLDADLE D LGWQYISG++PD  E DR+DNP L+G K+DP
Sbjct: 367 AVKFLLLPWKWGMKYFWDTLLDADLECDILGWQYISGSIPDGHELDRLDNPALQGAKYDP 426

Query: 427 YGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEAL 486
            GEY+R+WLPEL+RLPTEWIHHPW+AP +VL+A+G+ELG+NY  PIV +D A+  L +A+
Sbjct: 427 EGEYIRQWLPELARLPTEWIHHPWDAPLTVLKASGVELGTNYAKPIVDIDTARELLAKAI 486

Query: 487 SEMWQQEAASRAVIENGTEEGLGDSSESI 511
           S    +   ++ +I    +E + DS E++
Sbjct: 487 S----RTREAQIMIGAAPDEIVADSFEAL 510

BLAST of CmoCh01G016510 vs. Swiss-Prot
Match: CRY1_SINAL (Cryptochrome-1 OS=Sinapis alba GN=PHR1 PE=2 SV=1)

HSP 1 Score: 624.0 bits (1608), Expect = 1.9e-177
Identity = 290/486 (59.67%), Postives = 361/486 (74.28%), Query Frame = 1

Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MS    +IVWFRRDLR+EDNPAL AA   G+V  VFIW PEEEG +YPGR SRWW+KQSL
Sbjct: 1   MSTNKKTIVWFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQFYPGRASRWWMKQSL 60

Query: 61  AHLDSSLRSLGAYLVTKRSTNTISTLLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHL  SL++LG+ L   ++ +T+S +LD V+ATGA+++ FNHLYDP+SL+RDH  KE L 
Sbjct: 61  AHLRQSLKALGSELTLIKTHSTVSAILDCVRATGATKVVFNHLYDPVSLVRDHTVKEKLV 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDVDGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180
            +GI V+SYN DL   P        N         ++CL M  +    L PP R++   A
Sbjct: 121 ERGISVQSYNGDLCMSPGRYTVKRANLLLVLILTGKKCLDMSVE-SVVLPPPWRLMPLSA 180

Query: 181 SR----CPSDTLVFEDELEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKAD 240
           +     C  + L  E+E EK SNALL RAWSPGWSNADK L  FI   LI+Y+KN +K  
Sbjct: 181 AETVWACSVEELGLENEAEKPSNALLTRAWSPGWSNADKILNEFIEKQLIDYAKNSKKVV 240

Query: 241 SATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNEVGEESVNLFLKSIGLREYSRYM 300
             +TS LSP+LHFGE+SVR+VF   RMKQ++WA + N  GEES +LFL+ IGLR+YSR +
Sbjct: 241 GNSTSLLSPYLHFGEISVRRVFQCARMKQIIWARDKNGEGEESADLFLRGIGLRDYSRII 300

Query: 301 SFNHPYSHERPLLGHLKFFPWVVEEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRV 360
            FN P++HE+ LL HL+FFPW  +   FKAWRQGRTGYPLVDAGMRELWATGW+H+RIRV
Sbjct: 301 CFNFPFTHEQSLLSHLRFFPWDADVDKFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRV 360

Query: 361 VVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEG 420
           +VSSF VK L LPW+WGMKYFWDTLLDADLE D +GWQYISG+LPD  E DR+DNP ++G
Sbjct: 361 IVSSFAVKFLLLPWKWGMKYFWDTLLDADLECDIIGWQYISGSLPDGHELDRLDNPAIQG 420

Query: 421 YKFDPYGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKAR 480
            K+DP GEY+R+WLPEL+RLPTEWIHHPW+AP +VL+A+G+ELG+NY  PIV +D A+  
Sbjct: 421 AKYDPEGEYIRQWLPELARLPTEWIHHPWDAPLTVLKASGVELGTNYAKPIVVIDTAREL 480

Query: 481 LEEALS 483
           L +A+S
Sbjct: 481 LTKAIS 485

BLAST of CmoCh01G016510 vs. Swiss-Prot
Match: PHRA_AGRFC (Deoxyribodipyrimidine photo-lyase OS=Agrobacterium fabrum (strain C58 / ATCC 33970) GN=phrA PE=1 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 4.9e-88
Identity = 189/479 (39.46%), Postives = 265/479 (55.32%), Query Frame = 1

Query: 8   IVWFRRDLRVEDNPALTAAVR-AGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSLAHLDSS 67
           IVWFR+DLR+ DN AL AAV   G V+ V+I    E+     G    WWL  SLA L SS
Sbjct: 9   IVWFRKDLRLSDNLALLAAVEHGGPVIPVYI---REKSAGPLGGAQEWWLHHSLAALSSS 68

Query: 68  LRSLGAYLVTKRSTNTISTLLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLSAQGIGV 127
           L   G  LV   S +    L D++  TGA  + +N  YDP  +  D   K+ L   G+ V
Sbjct: 69  LEKAGGRLVLA-SGDAERILRDLISETGADTVVWNRRYDPTGMATDKALKQKLRDDGLTV 128

Query: 128 RSYNADLLYEPWDVKDVDGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA---SRC 187
           RS++  LL+EP  ++   G P+  +  FW R L    +P AP  PPK + +      S  
Sbjct: 129 RSFSGQLLHEPSRLQTKSGGPYRVYTPFW-RALEGSDEPHAPADPPKSLTAPKVWPKSEK 188

Query: 188 PSDTLVFEDELEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATTSFL 247
            S+  +   + +   +   +  W+PG + A   L  FI+G L  Y + R       TS L
Sbjct: 189 LSNWKLLPTKPDWAKD--FSDIWTPGETGALDKLDDFIDGALKGYEEGRDFPAKPATSLL 248

Query: 248 SPHLHFGEVSVRKVFHLVRMKQVLWANEGNEVGEESVNLFLKSIGLREYSRYMSFNHPYS 307
           SPHL  GE+S   V+H  +            +    ++ F K I  RE+  ++ F+ P  
Sbjct: 249 SPHLAAGEISPAAVWHATK-------GLSRHIASNDISRFRKEIVWREFCYHLLFHFPEL 308

Query: 308 HERPLLGHLKFFPWVVEEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFV 367
            E+        F W  +E  FKAW +G TGYP+VDAGMR+LW  G +H+R+R++V+SF +
Sbjct: 309 GEKNWNDSFDAFSWRDDEKSFKAWTRGMTGYPIVDAGMRQLWQHGTMHNRVRMIVASFLI 368

Query: 368 KVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFDPYG 427
           K L + WR G K+F DTL+DAD  S+A  WQ+++G+  D+  F RI NP L+G KFD  G
Sbjct: 369 KHLLIDWRKGEKWFRDTLVDADPASNAANWQWVAGSGADASPFFRIFNPILQGEKFDGDG 428

Query: 428 EYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALS 483
           +YVRR++PEL +L  ++IH P+ AP+  L+ AG+ELG  YPLPIV  D  KAR E AL+
Sbjct: 429 DYVRRFVPELEKLERKYIHKPFEAPKDALKKAGVELGKTYPLPIV--DHGKAR-ERALA 470

BLAST of CmoCh01G016510 vs. Swiss-Prot
Match: PHR_STRGR (Deoxyribodipyrimidine photo-lyase OS=Streptomyces griseus GN=phr PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 6.4e-56
Identity = 159/483 (32.92%), Postives = 237/483 (49.07%), Query Frame = 1

Query: 7   SIVWFRRDLRVEDNPALTAAVR-AGAVVAVFIW--APEEEGHYYPGRVSRWWLKQSLAHL 66
           ++V F  DLR+ DNP L AA+R A  VV +F+   A    G   P  ++  +L   LA L
Sbjct: 4   AVVLFTSDLRLHDNPVLRAALRDADEVVPLFVRDDAVHRAGFDAPNPLA--FLADCLAAL 63

Query: 67  DSSLRSLGAYLVTKRSTNTISTLLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLSAQG 126
           D+ LR  G  L+ +R     + +  V + TGA+++         +  R+ R +E L+  G
Sbjct: 64  DAGLRHRGGRLIVRRG-EAATEVRRVAEETGAARVHIAAGVSRYAARREQRIREALADSG 123

Query: 127 IGVRSYNADLL-YEPWDVKDVDGNP-FTTFAGFWERCLSMPCDPEAPLLPPKRIISGDAS 186
             +  ++A +    P  V    G   F  F  ++ R  +             R+  G AS
Sbjct: 124 RELHVHDAVVTALAPGRVVPTGGKDHFAVFTPYFRRWEAEGVRGTQTAPRTVRVPDGVAS 183

Query: 187 RCPSDTLVFEDELEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATTS 246
               D L   D +E  S  L AR    G     K +T+++NGP+ +Y           TS
Sbjct: 184 ----DPLPDRDCVENLSPGL-ARG---GEEAGRKLVTSWLNGPMADYEDGHDDLAGDATS 243

Query: 247 FLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNEVGEESVNLFLKSIGLREYSRYMSFNHP 306
            LSPHLHFG VS  ++ H  R K  L    G E        F++ +  R+      F+H 
Sbjct: 244 RLSPHLHFGTVSAAELVHRAREKGGL----GGEA-------FVRQLAWRD------FHHQ 303

Query: 307 YSHERPLLGHLKFFP----WVVEEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVV 366
              +RP      + P    W  +     AW+ G TGYPLVDA MR+L   GW+H+R R++
Sbjct: 304 VLADRPDASWSDYRPRHDRWRSDADEMHAWKSGLTGYPLVDAAMRQLAHEGWMHNRARML 363

Query: 367 VSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGY 426
            +SF  K L + WR G ++F D L+D D+ ++ L WQ+++GT  D+R  +R+ NP ++G 
Sbjct: 364 AASFLTKTLYVDWREGARHFLDLLVDGDVANNQLNWQWVAGTGTDTRP-NRVLNPVIQGK 423

Query: 427 KFDPYGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARL 481
           +FD  G+YVR W+PEL+ +    IH PW      L  AG++    YP P+V L  A+AR 
Sbjct: 424 RFDARGDYVRGWVPELAEVEGSAIHEPWKL--QGLDRAGLD----YPDPVVDLAEARARF 451

BLAST of CmoCh01G016510 vs. TrEMBL
Match: A0A0A0LDY1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G889670 PE=4 SV=1)

HSP 1 Score: 1309.3 bits (3387), Expect = 0.0e+00
Identity = 634/684 (92.69%), Postives = 650/684 (95.03%), Query Frame = 1

Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLR+EDNPALTAAVRAGAVV VFIWAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRIEDNPALTAAVRAGAVVVVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGAYLVTKRSTNTISTLLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHLDSSLRSLG YL+TKRSTNTIS LLDV KATGAS LFFNHLYDPLSLIRDHR KEVLS
Sbjct: 61  AHLDSSLRSLGTYLLTKRSTNTISALLDVFKATGASHLFFNHLYDPLSLIRDHRVKEVLS 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDVDGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180
           AQGI VRSYNADLLYEPWDVKD +GNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA
Sbjct: 121 AQGIRVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180

Query: 181 SRCPSDTLVFEDELEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATT 240
           SRCP DTLVFEDE EKGSNALLARAWSPGWSNADKALTTFINGPL+EYSKNRRKADSATT
Sbjct: 181 SRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATT 240

Query: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNEVGEESVNLFLKSIGLREYSRYMSFNH 300
           SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGN+ GEESVNLFLKSIGLREYSRYMSFNH
Sbjct: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGEESVNLFLKSIGLREYSRYMSFNH 300

Query: 301 PYSHERPLLGHLKFFPWVVEEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360
           PYSHERPLLGHLKFFPWVV+EGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
Sbjct: 301 PYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360

Query: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD 420
           FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD
Sbjct: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD 420

Query: 421 PYGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA 480
           P GEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAG+ELGSNYPLPIVGLDAAKARLEEA
Sbjct: 421 PNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGVELGSNYPLPIVGLDAAKARLEEA 480

Query: 481 LSEMWQQEAASRAVIENGTEEGLGDSSESIPIAFPQDIAMEDEDLEPARMNAHTIRCFED 540
           LSEMWQQEAASRA IENGTEEGLGDSSESIPIAFPQDIAM++ED+EPARMNAHT+RC+ED
Sbjct: 481 LSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAMDEEDIEPARMNAHTVRCYED 540

Query: 541 QMVPSMTSSVRLEDDHSLNSMNIRSTAEDGRAEVPTDLNLNQEPTRDA-NRRVQPTAPMN 600
           QMVPSMTSSVRLED+ SLN   I+STAEDGRAEVPT+ NL QEP RDA N R  PTAP  
Sbjct: 541 QMVPSMTSSVRLEDESSLN---IQSTAEDGRAEVPTNANLPQEPARDAVNPRAMPTAPTQ 600

Query: 601 ARLPYTAGIGLRSGAEDSTAESFSSSDSRRERDGGVVPVWSPPSSSYGEQFVVDENGIGT 660
            R PYTAGI LR+  EDSTAES SSSD RRERDGGVVPVWSPPSSSY EQFVVDENGIGT
Sbjct: 601 TRRPYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGT 660

Query: 661 SSSFLQGHQQTHQIINWRRLSQTG 684
           SSSFLQGHQQTHQIINWRRLSQTG
Sbjct: 661 SSSFLQGHQQTHQIINWRRLSQTG 681

BLAST of CmoCh01G016510 vs. TrEMBL
Match: B9GUW2_POPTR (Cryptochrome 1 family protein OS=Populus trichocarpa GN=POPTR_0002s09730g PE=4 SV=1)

HSP 1 Score: 1171.8 bits (3030), Expect = 0.0e+00
Identity = 574/687 (83.55%), Postives = 619/687 (90.10%), Query Frame = 1

Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLRVEDNPAL A VRAGAVVAVF+WAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVVAVFVWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGAYLVTKRSTNTISTLLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHLDSSLRSLG  LVTKRST+++STLL+V+K+TGA+QLFFNHLYDPLSL+RDHRAKEVL+
Sbjct: 61  AHLDSSLRSLGTSLVTKRSTDSVSTLLEVIKSTGATQLFFNHLYDPLSLVRDHRAKEVLT 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDVDGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180
           AQGI VRS+NADLLYEPWDV D  G PFTTFA FW+RCLSMP DPEAPLLPPKRIISGDA
Sbjct: 121 AQGIAVRSFNADLLYEPWDVNDAQGRPFTTFATFWDRCLSMPFDPEAPLLPPKRIISGDA 180

Query: 181 SRCPSDTLVFEDELEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATT 240
           SRCPS+ LVFEDELEKGSNALLARAWSPGWSNAD+ALTTFINGPLIEYSKNRRKADSATT
Sbjct: 181 SRCPSEMLVFEDELEKGSNALLARAWSPGWSNADRALTTFINGPLIEYSKNRRKADSATT 240

Query: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNEVGEESVNLFLKSIGLREYSRYMSFNH 300
           SFLSPHLHFGEVSVRKVFHLVR+KQVLWANEGN+ GEESVNLFLKSIGLREYSRY+SFNH
Sbjct: 241 SFLSPHLHFGEVSVRKVFHLVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYLSFNH 300

Query: 301 PYSHERPLLGHLKFFPWVVEEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360
           PYSHERPLLGHLKFFPWVV+ GYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVV+S
Sbjct: 301 PYSHERPLLGHLKFFPWVVDGGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVAS 360

Query: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD 420
           FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI+GTLPD REFDRIDNPQ EGYKFD
Sbjct: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDGREFDRIDNPQFEGYKFD 420

Query: 421 PYGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA 480
           P GEYVRRWLPEL+RLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVG+DAAK RLEEA
Sbjct: 421 PNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAKVRLEEA 480

Query: 481 LSEMWQQEAASRAVIENGTEEGLGDSSESIPIAFPQDIAMEDEDLEPARMNAH-TIRCFE 540
           LSEMWQQEAASRA IENGTEEGLGDSSES PIAFPQDI ME E+ EP R N   T R +E
Sbjct: 481 LSEMWQQEAASRAAIENGTEEGLGDSSESAPIAFPQDINME-ENHEPVRNNPPATNRRYE 540

Query: 541 DQMVPSMTSS-VRLEDDHSLNSMNIRSTAEDGRAEVPTDLNLNQEPTRDANRR--VQPTA 600
           DQMVPSMTSS +R+ED+ +  S ++R++  DGRAEVP D+N+NQ+P RD   +  VQ   
Sbjct: 541 DQMVPSMTSSFLRIEDEET--SSDVRNSTGDGRAEVPRDVNVNQQPRRDTLNQGFVQSVH 600

Query: 601 PMNARLPYTAGIGLRSGAEDSTAESFSSSDSRRERDGGVVPVWSPPSSSYGEQFVVDENG 660
             N+  P+    GL +  EDSTAES  SS SRRERDGG+VPVWSPP+SSY EQFV DENG
Sbjct: 601 NDNSLPPFNVVRGL-ANVEDSTAES--SSSSRRERDGGIVPVWSPPASSYSEQFVGDENG 660

Query: 661 IGTSSSFLQGHQQTHQIINWRRLSQTG 684
           IG +SS+L  H Q+HQI+NWRRL QTG
Sbjct: 661 IGATSSYLPRHPQSHQILNWRRLPQTG 681

BLAST of CmoCh01G016510 vs. TrEMBL
Match: G1FMC8_POPTN (Cryptochrome 1.2 OS=Populus tremula GN=CRY1.2 PE=4 SV=1)

HSP 1 Score: 1169.5 bits (3024), Expect = 0.0e+00
Identity = 573/687 (83.41%), Postives = 618/687 (89.96%), Query Frame = 1

Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLRVEDNPAL A VRAGAVVAVF+WAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVVAVFVWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGAYLVTKRSTNTISTLLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHLDSSLRSLG  LVTKRST+++STLL+V+K+TGA+QLFFNHLYDPLSL+RDHRAKEVL+
Sbjct: 61  AHLDSSLRSLGTSLVTKRSTDSVSTLLEVIKSTGATQLFFNHLYDPLSLVRDHRAKEVLT 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDVDGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180
           AQGI VRS+NADLLYEPWDV D  G PFTTFA FW+RCLSMP DPEAPLLPPKRIISGDA
Sbjct: 121 AQGIAVRSFNADLLYEPWDVNDAQGRPFTTFATFWDRCLSMPFDPEAPLLPPKRIISGDA 180

Query: 181 SRCPSDTLVFEDELEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATT 240
           SRCPS+ LVFEDE EKGSNALLARAWSPGWSNAD+ALTTFINGPLIEYSKNRRKADSATT
Sbjct: 181 SRCPSEMLVFEDESEKGSNALLARAWSPGWSNADRALTTFINGPLIEYSKNRRKADSATT 240

Query: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNEVGEESVNLFLKSIGLREYSRYMSFNH 300
           SFLSPHLHFGEVSVRKVFHLVR+KQVLWANEGN+ GEESVNLFLKSIGLREYSRY+SFNH
Sbjct: 241 SFLSPHLHFGEVSVRKVFHLVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYLSFNH 300

Query: 301 PYSHERPLLGHLKFFPWVVEEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360
           PYSHERPLLGHLKFFPWVV+EGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVV+S
Sbjct: 301 PYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVAS 360

Query: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD 420
           FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI+GTLPD REFDRIDNPQ EGYKFD
Sbjct: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDGREFDRIDNPQFEGYKFD 420

Query: 421 PYGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA 480
           P GEYVRRWLPEL+RLPT+WIHHPWNAPESVLQAAGIELGSNYPLPIVG+DAAK RLEEA
Sbjct: 421 PNGEYVRRWLPELARLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAKVRLEEA 480

Query: 481 LSEMWQQEAASRAVIENGTEEGLGDSSESIPIAFPQDIAMEDEDLEPARMNAH-TIRCFE 540
           LSEMWQQEAASRA IENGTEEGLGDSSES PIAFPQDI ME E+ EP R N   T R +E
Sbjct: 481 LSEMWQQEAASRAAIENGTEEGLGDSSESAPIAFPQDINME-ENHEPVRNNPPATNRRYE 540

Query: 541 DQMVPSMTSS-VRLEDDHSLNSMNIRSTAEDGRAEVPTDLNLNQEPTRDANRR--VQPTA 600
           DQMVPSMTSS +R+ED+ +  S ++R++  DGRAEVP D+NLNQ+P RD   +  VQ   
Sbjct: 541 DQMVPSMTSSFLRIEDEET--SSDVRNSTGDGRAEVPRDVNLNQQPRRDTLNQGFVQSVH 600

Query: 601 PMNARLPYTAGIGLRSGAEDSTAESFSSSDSRRERDGGVVPVWSPPSSSYGEQFVVDENG 660
             N+  P+    GL +  EDSTAES  SS SRRERDGG+VPVWSPP+ SY EQFV DENG
Sbjct: 601 NDNSLPPFNILRGL-ANVEDSTAES--SSSSRRERDGGIVPVWSPPTPSYSEQFVGDENG 660

Query: 661 IGTSSSFLQGHQQTHQIINWRRLSQTG 684
           IG +SS+L  H Q+HQI+NWRRL QTG
Sbjct: 661 IGATSSYLPRHPQSHQILNWRRLPQTG 681

BLAST of CmoCh01G016510 vs. TrEMBL
Match: A0A061FGG0_THECC (CRY1 isoform 1 OS=Theobroma cacao GN=TCM_034899 PE=4 SV=1)

HSP 1 Score: 1168.3 bits (3021), Expect = 0.0e+00
Identity = 571/687 (83.11%), Postives = 617/687 (89.81%), Query Frame = 1

Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGG CSIVWFRRDLRVEDNPAL A VRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGACSIVWFRRDLRVEDNPALAAGVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGAYLVTKRSTNTISTLLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHLDSSLRSLG  L++KRST ++S+LL+VVK+TGA+QLFFNHLYDP+SL+RDHRAKEVL+
Sbjct: 61  AHLDSSLRSLGTCLISKRSTESVSSLLEVVKSTGATQLFFNHLYDPISLVRDHRAKEVLT 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDVDGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180
           A G+ VRS+NADLLYEPWDV D  G PFTTFA FWE+CLSMP DPEAPLLPPKRIISGD 
Sbjct: 121 AHGVAVRSFNADLLYEPWDVNDAQGRPFTTFAAFWEKCLSMPYDPEAPLLPPKRIISGDV 180

Query: 181 SRCPSDTLVFEDELEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATT 240
           S CPS  L FEDE EKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATT
Sbjct: 181 SNCPSHPLAFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATT 240

Query: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNEVGEESVNLFLKSIGLREYSRYMSFNH 300
           SFLSPHLHFGEVSVRKVFHLVR+KQVLWANEGNE GEESVNLF+KSIGLREYSRY+SFNH
Sbjct: 241 SFLSPHLHFGEVSVRKVFHLVRIKQVLWANEGNEAGEESVNLFIKSIGLREYSRYLSFNH 300

Query: 301 PYSHERPLLGHLKFFPWVVEEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360
           PYSHERPLLGHLKFFPWVV+EGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
Sbjct: 301 PYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360

Query: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD 420
           FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPD REFDRIDNPQ EGYKFD
Sbjct: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKFD 420

Query: 421 PYGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA 480
           P+GEYVRRWLPEL+RLPT+WIHHPWNAPESVLQAAGIELGSNYPLPIVG+DAAKARL+EA
Sbjct: 421 PHGEYVRRWLPELARLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAKARLQEA 480

Query: 481 LSEMWQQEAASRAVIENGTEEGLGDSSESIPIAFPQDIAMEDEDLEPARMNA-HTIRCFE 540
           LSEMWQQEAASRA IENGTEEGLGDSSES P AFPQDI ME E+LEPAR NA  T R +E
Sbjct: 481 LSEMWQQEAASRAAIENGTEEGLGDSSESAPFAFPQDIQME-ENLEPARNNAPATTRRYE 540

Query: 541 DQMVPSMTSS-VRLEDDHSLNSMNIRSTAEDGRAEVPTDLNLNQEPTRDANRRVQPTAPM 600
           DQMVPSMTSS VR ED+    S+++R++AE+ RAEVP +L+++QEP RD   +  P    
Sbjct: 541 DQMVPSMTSSLVRGEDEEP--SLDLRTSAEESRAEVPRNLSMDQEPRRDILNQGVPQTVR 600

Query: 601 NAR--LPYTAGIGLRSGAEDSTAESFSSSDSRRERDGGVVPVWSPPSSSYGEQFVVDENG 660
           N+   L +    G+   AEDSTAES SSS  RRERDGGVVPVWSPP+SSY EQF+ DENG
Sbjct: 601 NSNTFLQFNIPTGV-GNAEDSTAES-SSSSGRRERDGGVVPVWSPPASSYSEQFIGDENG 660

Query: 661 IGTSSSFLQGHQQTHQIINWRRLSQTG 684
           IG SSS+LQ H ++HQI+NWRRLSQTG
Sbjct: 661 IGGSSSYLQRHPRSHQIVNWRRLSQTG 682

BLAST of CmoCh01G016510 vs. TrEMBL
Match: G1FMC7_POPTN (Cryptochrome 1.1 OS=Populus tremula GN=CRY1.1 PE=4 SV=1)

HSP 1 Score: 1161.0 bits (3002), Expect = 0.0e+00
Identity = 570/687 (82.97%), Postives = 616/687 (89.67%), Query Frame = 1

Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLRVEDNPAL A VRAGAVVAVF+WAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVVAVFVWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGAYLVTKRSTNTISTLLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           A+LDSSLRSLG  LVTKRST+++STLL+VVK+TGA+QL FNHLYDPLSL+RDHRAKE+L+
Sbjct: 61  AYLDSSLRSLGTSLVTKRSTDSVSTLLEVVKSTGATQLLFNHLYDPLSLVRDHRAKEILT 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDVDGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180
           AQGI VRS+NADLLYEPWDV D  G PFTTF  FWERCLSMP DPEAPLLPPKRIISGD 
Sbjct: 121 AQGITVRSFNADLLYEPWDVNDAQGRPFTTFDTFWERCLSMPFDPEAPLLPPKRIISGDV 180

Query: 181 SRCPSDTLVFEDELEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATT 240
           SRCPS TLVFEDE EKGSNALLARAWSPGWSNAD+ALTTFINGPLIEYS NRRKADSATT
Sbjct: 181 SRCPSVTLVFEDESEKGSNALLARAWSPGWSNADRALTTFINGPLIEYSMNRRKADSATT 240

Query: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNEVGEESVNLFLKSIGLREYSRYMSFNH 300
           SFLSPHLHFGEVSVRKVFHLVR+KQVLWANEGN+ GEESVNLF+KSIGLREYSRY+SFNH
Sbjct: 241 SFLSPHLHFGEVSVRKVFHLVRIKQVLWANEGNKAGEESVNLFIKSIGLREYSRYLSFNH 300

Query: 301 PYSHERPLLGHLKFFPWVVEEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360
           PY+HERPLLGHLKFFPWVV+EGYFKAWRQGRTGYPLVDAGMRELWA GWLHDRIRVVV+S
Sbjct: 301 PYTHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWAAGWLHDRIRVVVAS 360

Query: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD 420
           FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI+GTLPD REFDRIDNPQ EGYKFD
Sbjct: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDCREFDRIDNPQFEGYKFD 420

Query: 421 PYGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA 480
           P GEYVRRWLPEL+RLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVG+DAAK RLEEA
Sbjct: 421 PNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAKVRLEEA 480

Query: 481 LSEMWQQEAASRAVIENGTEEGLGDSSESIPIAFPQDIAMEDEDLEPARMNAH-TIRCFE 540
           LSEMWQQEAASRA IENGTEEGLGDSSES PIAFP+DI ME E+ EP R N   T R +E
Sbjct: 481 LSEMWQQEAASRAAIENGTEEGLGDSSESAPIAFPEDILME-ENHEPVRNNPPATNRRYE 540

Query: 541 DQMVPSMTSS-VRLEDDHSLNSMNIRSTAEDGRAEVPTDLNLNQEPTRDANRR--VQPTA 600
           DQMVPSMTSS +R+ED+ +  S ++R++  DGRAEVP D+N+NQEP RDA  +  VQ   
Sbjct: 541 DQMVPSMTSSFLRIEDEET--SSDVRNSTGDGRAEVPRDVNVNQEPRRDALNQGFVQTVR 600

Query: 601 PMNARLPYTAGIGLRSGAEDSTAESFSSSDSRRERDGGVVPVWSPPSSSYGEQFVVDENG 660
              A  P+    GL +  EDSTAES  SS SRRERDGG+VPVWSPP+SSY EQFV D++G
Sbjct: 601 NNTALSPFNILRGL-TNVEDSTAES--SSSSRRERDGGIVPVWSPPTSSYSEQFVGDDSG 660

Query: 661 IGTSSSFLQGHQQTHQIINWRRLSQTG 684
           IG +SS+LQ H Q+HQIINWRRLSQTG
Sbjct: 661 IGATSSYLQRHPQSHQIINWRRLSQTG 681

BLAST of CmoCh01G016510 vs. TAIR10
Match: AT4G08920.1 (AT4G08920.1 cryptochrome 1)

HSP 1 Score: 1075.1 bits (2779), Expect = 0.0e+00
Identity = 530/687 (77.15%), Postives = 589/687 (85.74%), Query Frame = 1

Query: 4   GGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSLAHL 63
           GGCSIVWFRRDLRVEDNPAL AAVRAG V+A+F+WAPEEEGHY+PGRVSRWWLK SLA L
Sbjct: 11  GGCSIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRWWLKNSLAQL 70

Query: 64  DSSLRSLGAYLVTKRSTNTISTLLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLSAQG 123
           DSSLRSLG  L+TKRST+++++LLDVVK+TGASQ+FFNHLYDPLSL+RDHRAK+VL+AQG
Sbjct: 71  DSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVRDHRAKDVLTAQG 130

Query: 124 IGVRSYNADLLYEPWDVKDVDGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDASRC 183
           I VRS+NADLLYEPW+V D  G PF+ FA FWERCLSMP DPE+PLLPPK+IISGD S+C
Sbjct: 131 IAVRSFNADLLYEPWEVTDELGRPFSMFAAFWERCLSMPYDPESPLLPPKKIISGDVSKC 190

Query: 184 PSDTLVFEDELEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATTSFL 243
            +D LVFED+ EKGSNALLARAWSPGWSN DKALTTFINGPL+EYSKNRRKADSATTSFL
Sbjct: 191 VADPLVFEDDSEKGSNALLARAWSPGWSNGDKALTTFINGPLLEYSKNRRKADSATTSFL 250

Query: 244 SPHLHFGEVSVRKVFHLVRMKQVLWANEGNEVGEESVNLFLKSIGLREYSRYMSFNHPYS 303
           SPHLHFGEVSVRKVFHLVR+KQV WANEGNE GEESVNLFLKSIGLREYSRY+SFNHPYS
Sbjct: 251 SPHLHFGEVSVRKVFHLVRIKQVAWANEGNEAGEESVNLFLKSIGLREYSRYISFNHPYS 310

Query: 304 HERPLLGHLKFFPWVVEEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFV 363
           HERPLLGHLKFFPW V+E YFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFV
Sbjct: 311 HERPLLGHLKFFPWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFV 370

Query: 364 KVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFDPYG 423
           KVLQLPWRWGMKYFWDTLLDADLESDALGWQYI+GTLPDSREFDRIDNPQ EGYKFDP G
Sbjct: 371 KVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRIDNPQFEGYKFDPNG 430

Query: 424 EYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSE 483
           EYVRRWLPELSRLPT+WIHHPWNAPESVLQAAGIELGSNYPLPIVGLD AKARL EALS+
Sbjct: 431 EYVRRWLPELSRLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDEAKARLHEALSQ 490

Query: 484 MWQQEAASRAVIENGTEEGLGDSS--ESIPIAFPQDIAMEDEDLEPARMNAHTIRCFEDQ 543
           MWQ EAASRA IENG+EEGLGDS+  E  PI FP+DI M  E+ EP R+N +  R +EDQ
Sbjct: 491 MWQLEAASRAAIENGSEEGLGDSAEVEEAPIEFPRDITM--EETEPTRLNPN--RRYEDQ 550

Query: 544 MVPSMTSSVRLEDDHSLNSMNIRSTAEDGRAEVPTDL-NLNQEPTRDANRRVQPTA-PMN 603
           MVPS+TSS+   ++   +S+N+R++  D RAEVP ++ N NQ       RR +P +  + 
Sbjct: 551 MVPSITSSLIRPEEDEESSLNLRNSVGDSRAEVPRNMVNTNQA----QQRRAEPASNQVT 610

Query: 604 ARLPYTAGIGLRSGAEDSTAESFSSSDSRRERDGGVVPVWSPPSSSYGEQFVVDENGIG- 663
           A +P      +    EDSTAE  SSS  RRER GG+VP WSP    Y EQF  +ENGIG 
Sbjct: 611 AMIPEFNIRIVAESTEDSTAE--SSSSGRRERSGGIVPEWSP---GYSEQFPSEENGIGG 670

Query: 664 --TSSSFLQGHQQTHQIINWRRLSQTG 684
             T+SS+LQ H   H+I+NWRRLSQTG
Sbjct: 671 GSTTSSYLQNH---HEILNWRRLSQTG 681

BLAST of CmoCh01G016510 vs. TAIR10
Match: AT1G04400.2 (AT1G04400.2 cryptochrome 2)

HSP 1 Score: 661.8 bits (1706), Expect = 4.7e-190
Identity = 305/509 (59.92%), Postives = 384/509 (75.44%), Query Frame = 1

Query: 7   SIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSLAHLDSS 66
           +IVWFRRDLR+EDNPAL AA   G+V  VFIW PEEEG +YPGR SRWW+KQSLAHL  S
Sbjct: 7   TIVWFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQFYPGRASRWWMKQSLAHLSQS 66

Query: 67  LRSLGAYLVTKRSTNTISTLLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLSAQGIGV 126
           L++LG+ L   ++ NTIS +LD ++ TGA+++ FNHLYDP+SL+RDH  KE L  +GI V
Sbjct: 67  LKALGSDLTLIKTHNTISAILDCIRVTGATKVVFNHLYDPVSLVRDHTVKEKLVERGISV 126

Query: 127 RSYNADLLYEPWDVKDVDGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDASR---- 186
           +SYN DLLYEPW++    G PFT+F  +W++CL M  +    L PP R++   A+     
Sbjct: 127 QSYNGDLLYEPWEIYCEKGKPFTSFNSYWKKCLDMSIE-SVMLPPPWRLMPITAAAEAIW 186

Query: 187 -CPSDTLVFEDELEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATTS 246
            C  + L  E+E EK SNALL RAWSPGWSNADK L  FI   LI+Y+KN +K    +TS
Sbjct: 187 ACSIEELGLENEAEKPSNALLTRAWSPGWSNADKLLNEFIEKQLIDYAKNSKKVVGNSTS 246

Query: 247 FLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNEVGEESVNLFLKSIGLREYSRYMSFNHP 306
            LSP+LHFGE+SVR VF   RMKQ++WA + N  GEES +LFL+ IGLREYSRY+ FN P
Sbjct: 247 LLSPYLHFGEISVRHVFQCARMKQIIWARDKNSEGEESADLFLRGIGLREYSRYICFNFP 306

Query: 307 YSHERPLLGHLKFFPWVVEEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSF 366
           ++HE+ LL HL+FFPW  +   FKAWRQGRTGYPLVDAGMRELWATGW+H+RIRV+VSSF
Sbjct: 307 FTHEQSLLSHLRFFPWDADVDKFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSF 366

Query: 367 FVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFDP 426
            VK L LPW+WGMKYFWDTLLDADLE D LGWQYISG++PD  E DR+DNP L+G K+DP
Sbjct: 367 AVKFLLLPWKWGMKYFWDTLLDADLECDILGWQYISGSIPDGHELDRLDNPALQGAKYDP 426

Query: 427 YGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEAL 486
            GEY+R+WLPEL+RLPTEWIHHPW+AP +VL+A+G+ELG+NY  PIV +D A+  L +A+
Sbjct: 427 EGEYIRQWLPELARLPTEWIHHPWDAPLTVLKASGVELGTNYAKPIVDIDTARELLAKAI 486

Query: 487 SEMWQQEAASRAVIENGTEEGLGDSSESI 511
           S    +   ++ +I    +E + DS E++
Sbjct: 487 S----RTREAQIMIGAAPDEIVADSFEAL 510

BLAST of CmoCh01G016510 vs. TAIR10
Match: AT3G15620.1 (AT3G15620.1 DNA photolyase family protein)

HSP 1 Score: 171.0 bits (432), Expect = 2.5e-42
Identity = 154/535 (28.79%), Postives = 247/535 (46.17%), Query Frame = 1

Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVV-AVFIWAPE----EEGHYYPGR----V 60
           M+ G  S++WFR+ LRV DNPAL  A +    +  VF+  P     +   + PG     V
Sbjct: 20  MATGSGSLIWFRKGLRVHDNPALEYASKGSEFMYPVFVIDPHYMESDPSAFSPGSSRAGV 79

Query: 61  SRW-WLKQSLAHLDSSLRSLGAYLVTKRSTNTISTLLDVVKATGASQLFFNHLYDPLSLI 120
           +R  +L +SL  LDSSL+ LG+ L+  +       L+  ++     +L F +  DP    
Sbjct: 80  NRIRFLLESLKDLDSSLKKLGSRLLVFKGEPG-EVLVRCLQEWKVKRLCFEYDTDPYYQA 139

Query: 121 RDHRAKEVLSAQGIGVRSYNADLLYEPWDVKDVDGN-PFTTFAGFWE-----RCLSMPCD 180
            D + K+  S+ G+ V S  +  L+ P  + + +G  P  ++  F +      C      
Sbjct: 140 LDVKVKDYASSTGVEVFSPVSHTLFNPAHIIEKNGGKPPLSYQSFLKVAGEPSCAKSELV 199

Query: 181 PEAPLLPPKRIISG-DASRCPS-DTLVFEDELEKGSNALLARAWSP---GWSNADKALTT 240
                LPP   I     S  PS + L ++D+ +          W+P   G S A K LT 
Sbjct: 200 MSYSSLPPIGDIGNLGISEVPSLEELGYKDDEQAD--------WTPFRGGESEALKRLTK 259

Query: 241 FINGPLIEYSKNRRKADSAT-----TSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNE 300
            I+      +  + K D +      T+ +SP+L FG +S R  +  ++       N   +
Sbjct: 260 SISDKAWVANFEKPKGDPSAFLKPATTVMSPYLKFGCLSSRYFYQCLQ-------NIYKD 319

Query: 301 VGEES---VNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVEEGYFKAWRQGR 360
           V + +   V+L L  +  RE+    +F  P   +       K  PW  +     AWR G+
Sbjct: 320 VKKHTSPPVSL-LGQLLWREFFYTTAFGTPNFDKMKGNRICKQIPWNEDHAMLAAWRDGK 379

Query: 361 TGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDA 420
           TGYP +DA M +L   GW+H   R  V+ F  +  L + W  G   F   L+D+D   + 
Sbjct: 380 TGYPWIDAIMVQLLKWGWMHHLARHCVACFLTRGDLFIHWEQGRDVFERLLIDSDWAINN 439

Query: 421 LGWQYISGTLPDSREFDRIDNPQLEGYKFDPYGEYVRRWLPELSRLPTEWIHHPWNAPES 480
             W ++S +     +F+RI +P   G K+DP G+Y+R +LP L  +P ++I+ PW AP S
Sbjct: 440 GNWMWLSCS-SFFYQFNRIYSPISFGKKYDPDGKYIRHFLPVLKDMPKQYIYEPWTAPLS 499

Query: 481 VLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEAASRAVIENGTEEGLGD 506
           V   A   +G +YP P+V  D+A    +E   +M +  A ++ +     EE L D
Sbjct: 500 VQTKANCIVGKDYPKPMVLHDSAS---KECKRKMGEAYALNKKMDGKVDEENLRD 533

BLAST of CmoCh01G016510 vs. TAIR10
Match: AT5G24850.1 (AT5G24850.1 cryptochrome 3)

HSP 1 Score: 135.6 bits (340), Expect = 1.2e-31
Identity = 132/468 (28.21%), Postives = 199/468 (42.52%), Query Frame = 1

Query: 3   GGGCSIVWFRRDLRVEDNPALTAAVRAG-AVVAVFIWAPE--EEGHYY----PGRVSRWW 62
           G G +I+WFR DLRV DN AL  A  +   ++ V+   P      H++     G +   +
Sbjct: 39  GKGVTILWFRNDLRVLDNDALYKAWSSSDTILPVYCLDPRLFHTTHFFNFPKTGALRGGF 98

Query: 63  LKQSLAHLDSSLRSLGAYLVTKRSTNTISTLLDVVKATGASQLFFNHLYDPLSLIRDHRA 122
           L + L  L  +L   G  L+  RS      L  + K  GA  +F +       +  +   
Sbjct: 99  LMECLVDLRKNLMKRGLNLLI-RSGKPEEILPSLAKDFGARTVFAHKETCSEEVDVERLV 158

Query: 123 KEVLSAQGIGVRS---------YNADLLYEPWDVKDVDGNPFTTFAGFWERCLSMPCDPE 182
            + L   G   +          +  DL ++ +D+ DV    +T F    E   S+     
Sbjct: 159 NQGLKRVGNSTKLELIWGSTMYHKDDLPFDVFDLPDV----YTQFRKSVEAKCSIRSSTR 218

Query: 183 APL-LPPKRIISGDASRCPSDTLVFE-DELEKGSNALLARAWSPGWSNADKALTTFINGP 242
            PL L P   +         + L  E  E+ +G   +   +   G     +    F    
Sbjct: 219 IPLSLGPTPSVDDWGDVPTLEKLGVEPQEVTRGMRFVGGESAGVG-----RVFEYFWKKD 278

Query: 243 LIEYSKNRRKA---DSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNEVGEESVN 302
           L++  K  R        +T F SP L FG +S R ++  V+        E   V   S  
Sbjct: 279 LLKVYKETRNGMLGPDYSTKF-SPWLAFGCISPRFIYEEVQRY------EKERVANNSTY 338

Query: 303 LFLKSIGLREYSRYMSFNHPYS-----HERPLLGHLKFFPWVVEEGYFKAWRQGRTGYPL 362
             L  +  R+Y R++S     S       R + G      W  ++  F++WR  +TGYPL
Sbjct: 339 WVLFELIWRDYFRFLSIKCGNSLFHLGGPRNVQGK-----WSQDQKLFESWRDAKTGYPL 398

Query: 363 VDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI 422
           +DA M+EL  TG++ +R R +V SF V+ + L WR G ++F   LLD D  S+   W Y 
Sbjct: 399 IDANMKELSTTGFMSNRGRQIVCSFLVRDMGLDWRMGAEWFETCLLDYDPCSNYGNWTYG 458

Query: 423 SGTLPDSREFDRIDNPQLEGYKFDPYGEYVRRWLPELSRLPTEWIHHP 445
           +G   D RE DR  +   +   +DP GEYV  WL +L RLP E  H P
Sbjct: 459 AGVGNDPRE-DRYFSIPKQAQNYDPEGEYVAFWLQQLRRLPKEKRHWP 483

BLAST of CmoCh01G016510 vs. TAIR10
Match: AT2G47590.1 (AT2G47590.1 photolyase/blue-light receptor 2)

HSP 1 Score: 50.4 bits (119), Expect = 4.9e-06
Identity = 36/150 (24.00%), Postives = 72/150 (48.00%), Query Frame = 1

Query: 7   SIVWFRRDLRVEDNPALTAA-VRAGAVVAVFIWAPEE-----EGHYYPGRVSRWWLKQSL 66
           ++VWFR DLRV DN  L +A     +V+ V+ + P +      G    G     +L +S+
Sbjct: 117 AVVWFRNDLRVHDNECLNSANDECVSVLPVYCFDPRDYGKSSSGFDKTGPFRAQFLIESV 176

Query: 67  AHLDSSLRSLGAYLVTKRSTNTISTLLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 126
           + L  +L++ G+ LV  R     + L+++ K  GA  ++ +       +  + + +  + 
Sbjct: 177 SELRKNLQARGSNLVV-RVGKPEAVLVELAKEIGADAVYAHREVSHDEVKAEGKIETAMK 236

Query: 127 AQGIGVRSYNADLLYE----PWDVKDVDGN 147
            +G+ V+ +    LY     P+ ++D+  N
Sbjct: 237 EEGVEVKYFWGSTLYHLDDLPFKIEDLPSN 265

BLAST of CmoCh01G016510 vs. NCBI nr
Match: gi|659132502|ref|XP_008466232.1| (PREDICTED: cryptochrome-1 isoform X1 [Cucumis melo])

HSP 1 Score: 1310.0 bits (3389), Expect = 0.0e+00
Identity = 634/684 (92.69%), Postives = 652/684 (95.32%), Query Frame = 1

Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLR+EDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRIEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGAYLVTKRSTNTISTLLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHLDSSLRSLG +L+TKRSTNTIS LLDV KATGAS LFFNHLYDPLSLIRDHR KEVLS
Sbjct: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVFKATGASHLFFNHLYDPLSLIRDHRVKEVLS 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDVDGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180
           AQGI VRSYNADLLYEPWDVKD +GNPFTTFAGFWERCLSMPCDPEAPLLPPKRI+SGDA
Sbjct: 121 AQGIRVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIVSGDA 180

Query: 181 SRCPSDTLVFEDELEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATT 240
           SRCP DTLVFEDE EKGSNALLARAWSPGWSNADKALTTFINGPL+EYSKNRRKADSATT
Sbjct: 181 SRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATT 240

Query: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNEVGEESVNLFLKSIGLREYSRYMSFNH 300
           SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGN+ GEESVNLFLKSIGLREYSRYMSFNH
Sbjct: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGEESVNLFLKSIGLREYSRYMSFNH 300

Query: 301 PYSHERPLLGHLKFFPWVVEEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360
           PYSHERPLLGHLKFFPWVV+EGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
Sbjct: 301 PYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360

Query: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD 420
           FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD
Sbjct: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD 420

Query: 421 PYGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA 480
           P GEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA
Sbjct: 421 PNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA 480

Query: 481 LSEMWQQEAASRAVIENGTEEGLGDSSESIPIAFPQDIAMEDEDLEPARMNAHTIRCFED 540
           LSEMWQQEAASRA IENGTEEGLGDSSESIPIAFPQDIAM++ED+EPAR+NAHT+RC+ED
Sbjct: 481 LSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAMDEEDIEPARVNAHTVRCYED 540

Query: 541 QMVPSMTSSVRLEDDHSLNSMNIRSTAEDGRAEVPTDLNLNQEPTRDA-NRRVQPTAPMN 600
           QMVPSMTSSVRLED+ SLN   I+STAEDGRAEVPT+ NL QEP RDA N R  PTAP  
Sbjct: 541 QMVPSMTSSVRLEDESSLN---IQSTAEDGRAEVPTNANLPQEPARDAVNPRAMPTAPTQ 600

Query: 601 ARLPYTAGIGLRSGAEDSTAESFSSSDSRRERDGGVVPVWSPPSSSYGEQFVVDENGIGT 660
            RLPYTAGI LR+  EDSTAES SSSD RRERDGGVVPVWSPPSSSY EQFVVDENGIGT
Sbjct: 601 TRLPYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGT 660

Query: 661 SSSFLQGHQQTHQIINWRRLSQTG 684
           SSSFLQGHQQTHQIINWRRLSQTG
Sbjct: 661 SSSFLQGHQQTHQIINWRRLSQTG 681

BLAST of CmoCh01G016510 vs. NCBI nr
Match: gi|449437020|ref|XP_004136290.1| (PREDICTED: cryptochrome-1 isoform X2 [Cucumis sativus])

HSP 1 Score: 1309.3 bits (3387), Expect = 0.0e+00
Identity = 634/684 (92.69%), Postives = 650/684 (95.03%), Query Frame = 1

Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLR+EDNPALTAAVRAGAVV VFIWAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRIEDNPALTAAVRAGAVVVVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGAYLVTKRSTNTISTLLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHLDSSLRSLG YL+TKRSTNTIS LLDV KATGAS LFFNHLYDPLSLIRDHR KEVLS
Sbjct: 61  AHLDSSLRSLGTYLLTKRSTNTISALLDVFKATGASHLFFNHLYDPLSLIRDHRVKEVLS 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDVDGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180
           AQGI VRSYNADLLYEPWDVKD +GNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA
Sbjct: 121 AQGIRVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180

Query: 181 SRCPSDTLVFEDELEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATT 240
           SRCP DTLVFEDE EKGSNALLARAWSPGWSNADKALTTFINGPL+EYSKNRRKADSATT
Sbjct: 181 SRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATT 240

Query: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNEVGEESVNLFLKSIGLREYSRYMSFNH 300
           SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGN+ GEESVNLFLKSIGLREYSRYMSFNH
Sbjct: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGEESVNLFLKSIGLREYSRYMSFNH 300

Query: 301 PYSHERPLLGHLKFFPWVVEEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360
           PYSHERPLLGHLKFFPWVV+EGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
Sbjct: 301 PYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360

Query: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD 420
           FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD
Sbjct: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD 420

Query: 421 PYGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA 480
           P GEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAG+ELGSNYPLPIVGLDAAKARLEEA
Sbjct: 421 PNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGVELGSNYPLPIVGLDAAKARLEEA 480

Query: 481 LSEMWQQEAASRAVIENGTEEGLGDSSESIPIAFPQDIAMEDEDLEPARMNAHTIRCFED 540
           LSEMWQQEAASRA IENGTEEGLGDSSESIPIAFPQDIAM++ED+EPARMNAHT+RC+ED
Sbjct: 481 LSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAMDEEDIEPARMNAHTVRCYED 540

Query: 541 QMVPSMTSSVRLEDDHSLNSMNIRSTAEDGRAEVPTDLNLNQEPTRDA-NRRVQPTAPMN 600
           QMVPSMTSSVRLED+ SLN   I+STAEDGRAEVPT+ NL QEP RDA N R  PTAP  
Sbjct: 541 QMVPSMTSSVRLEDESSLN---IQSTAEDGRAEVPTNANLPQEPARDAVNPRAMPTAPTQ 600

Query: 601 ARLPYTAGIGLRSGAEDSTAESFSSSDSRRERDGGVVPVWSPPSSSYGEQFVVDENGIGT 660
            R PYTAGI LR+  EDSTAES SSSD RRERDGGVVPVWSPPSSSY EQFVVDENGIGT
Sbjct: 601 TRRPYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGT 660

Query: 661 SSSFLQGHQQTHQIINWRRLSQTG 684
           SSSFLQGHQQTHQIINWRRLSQTG
Sbjct: 661 SSSFLQGHQQTHQIINWRRLSQTG 681

BLAST of CmoCh01G016510 vs. NCBI nr
Match: gi|659132506|ref|XP_008466234.1| (PREDICTED: cryptochrome-1 isoform X3 [Cucumis melo])

HSP 1 Score: 1176.8 bits (3043), Expect = 0.0e+00
Identity = 565/608 (92.93%), Postives = 582/608 (95.72%), Query Frame = 1

Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLR+EDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRIEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGAYLVTKRSTNTISTLLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHLDSSLRSLG +L+TKRSTNTIS LLDV KATGAS LFFNHLYDPLSLIRDHR KEVLS
Sbjct: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVFKATGASHLFFNHLYDPLSLIRDHRVKEVLS 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDVDGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180
           AQGI VRSYNADLLYEPWDVKD +GNPFTTFAGFWERCLSMPCDPEAPLLPPKRI+SGDA
Sbjct: 121 AQGIRVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIVSGDA 180

Query: 181 SRCPSDTLVFEDELEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATT 240
           SRCP DTLVFEDE EKGSNALLARAWSPGWSNADKALTTFINGPL+EYSKNRRKADSATT
Sbjct: 181 SRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATT 240

Query: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNEVGEESVNLFLKSIGLREYSRYMSFNH 300
           SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGN+ GEESVNLFLKSIGLREYSRYMSFNH
Sbjct: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGEESVNLFLKSIGLREYSRYMSFNH 300

Query: 301 PYSHERPLLGHLKFFPWVVEEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360
           PYSHERPLLGHLKFFPWVV+EGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
Sbjct: 301 PYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360

Query: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD 420
           FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD
Sbjct: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD 420

Query: 421 PYGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA 480
           P GEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA
Sbjct: 421 PNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA 480

Query: 481 LSEMWQQEAASRAVIENGTEEGLGDSSESIPIAFPQDIAMEDEDLEPARMNAHTIRCFED 540
           LSEMWQQEAASRA IENGTEEGLGDSSESIPIAFPQDIAM++ED+EPAR+NAHT+RC+ED
Sbjct: 481 LSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAMDEEDIEPARVNAHTVRCYED 540

Query: 541 QMVPSMTSSVRLEDDHSLNSMNIRSTAEDGRAEVPTDLNLNQEPTRDA-NRRVQPTAPMN 600
           QMVPSMTSSVRLED+ SLN   I+STAEDGRAEVPT+ NL QEP RDA N R  PTAP  
Sbjct: 541 QMVPSMTSSVRLEDESSLN---IQSTAEDGRAEVPTNANLPQEPARDAVNPRAMPTAPTQ 600

Query: 601 ARLPYTAG 608
            RLPYTAG
Sbjct: 601 TRLPYTAG 605

BLAST of CmoCh01G016510 vs. NCBI nr
Match: gi|778687351|ref|XP_011652552.1| (PREDICTED: cryptochrome-1 isoform X3 [Cucumis sativus])

HSP 1 Score: 1176.0 bits (3041), Expect = 0.0e+00
Identity = 565/608 (92.93%), Postives = 580/608 (95.39%), Query Frame = 1

Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLR+EDNPALTAAVRAGAVV VFIWAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRIEDNPALTAAVRAGAVVVVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGAYLVTKRSTNTISTLLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHLDSSLRSLG YL+TKRSTNTIS LLDV KATGAS LFFNHLYDPLSLIRDHR KEVLS
Sbjct: 61  AHLDSSLRSLGTYLLTKRSTNTISALLDVFKATGASHLFFNHLYDPLSLIRDHRVKEVLS 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDVDGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180
           AQGI VRSYNADLLYEPWDVKD +GNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA
Sbjct: 121 AQGIRVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180

Query: 181 SRCPSDTLVFEDELEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATT 240
           SRCP DTLVFEDE EKGSNALLARAWSPGWSNADKALTTFINGPL+EYSKNRRKADSATT
Sbjct: 181 SRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATT 240

Query: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNEVGEESVNLFLKSIGLREYSRYMSFNH 300
           SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGN+ GEESVNLFLKSIGLREYSRYMSFNH
Sbjct: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGEESVNLFLKSIGLREYSRYMSFNH 300

Query: 301 PYSHERPLLGHLKFFPWVVEEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360
           PYSHERPLLGHLKFFPWVV+EGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
Sbjct: 301 PYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360

Query: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD 420
           FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD
Sbjct: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD 420

Query: 421 PYGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA 480
           P GEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAG+ELGSNYPLPIVGLDAAKARLEEA
Sbjct: 421 PNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGVELGSNYPLPIVGLDAAKARLEEA 480

Query: 481 LSEMWQQEAASRAVIENGTEEGLGDSSESIPIAFPQDIAMEDEDLEPARMNAHTIRCFED 540
           LSEMWQQEAASRA IENGTEEGLGDSSESIPIAFPQDIAM++ED+EPARMNAHT+RC+ED
Sbjct: 481 LSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAMDEEDIEPARMNAHTVRCYED 540

Query: 541 QMVPSMTSSVRLEDDHSLNSMNIRSTAEDGRAEVPTDLNLNQEPTRDA-NRRVQPTAPMN 600
           QMVPSMTSSVRLED+ SLN   I+STAEDGRAEVPT+ NL QEP RDA N R  PTAP  
Sbjct: 541 QMVPSMTSSVRLEDESSLN---IQSTAEDGRAEVPTNANLPQEPARDAVNPRAMPTAPTQ 600

Query: 601 ARLPYTAG 608
            R PYTAG
Sbjct: 601 TRRPYTAG 605

BLAST of CmoCh01G016510 vs. NCBI nr
Match: gi|224063235|ref|XP_002301054.1| (cryptochrome 1 family protein [Populus trichocarpa])

HSP 1 Score: 1171.8 bits (3030), Expect = 0.0e+00
Identity = 574/687 (83.55%), Postives = 619/687 (90.10%), Query Frame = 1

Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLRVEDNPAL A VRAGAVVAVF+WAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVVAVFVWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGAYLVTKRSTNTISTLLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHLDSSLRSLG  LVTKRST+++STLL+V+K+TGA+QLFFNHLYDPLSL+RDHRAKEVL+
Sbjct: 61  AHLDSSLRSLGTSLVTKRSTDSVSTLLEVIKSTGATQLFFNHLYDPLSLVRDHRAKEVLT 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDVDGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA 180
           AQGI VRS+NADLLYEPWDV D  G PFTTFA FW+RCLSMP DPEAPLLPPKRIISGDA
Sbjct: 121 AQGIAVRSFNADLLYEPWDVNDAQGRPFTTFATFWDRCLSMPFDPEAPLLPPKRIISGDA 180

Query: 181 SRCPSDTLVFEDELEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATT 240
           SRCPS+ LVFEDELEKGSNALLARAWSPGWSNAD+ALTTFINGPLIEYSKNRRKADSATT
Sbjct: 181 SRCPSEMLVFEDELEKGSNALLARAWSPGWSNADRALTTFINGPLIEYSKNRRKADSATT 240

Query: 241 SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNEVGEESVNLFLKSIGLREYSRYMSFNH 300
           SFLSPHLHFGEVSVRKVFHLVR+KQVLWANEGN+ GEESVNLFLKSIGLREYSRY+SFNH
Sbjct: 241 SFLSPHLHFGEVSVRKVFHLVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYLSFNH 300

Query: 301 PYSHERPLLGHLKFFPWVVEEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360
           PYSHERPLLGHLKFFPWVV+ GYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVV+S
Sbjct: 301 PYSHERPLLGHLKFFPWVVDGGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVAS 360

Query: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD 420
           FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI+GTLPD REFDRIDNPQ EGYKFD
Sbjct: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDGREFDRIDNPQFEGYKFD 420

Query: 421 PYGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA 480
           P GEYVRRWLPEL+RLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVG+DAAK RLEEA
Sbjct: 421 PNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAKVRLEEA 480

Query: 481 LSEMWQQEAASRAVIENGTEEGLGDSSESIPIAFPQDIAMEDEDLEPARMNAH-TIRCFE 540
           LSEMWQQEAASRA IENGTEEGLGDSSES PIAFPQDI ME E+ EP R N   T R +E
Sbjct: 481 LSEMWQQEAASRAAIENGTEEGLGDSSESAPIAFPQDINME-ENHEPVRNNPPATNRRYE 540

Query: 541 DQMVPSMTSS-VRLEDDHSLNSMNIRSTAEDGRAEVPTDLNLNQEPTRDANRR--VQPTA 600
           DQMVPSMTSS +R+ED+ +  S ++R++  DGRAEVP D+N+NQ+P RD   +  VQ   
Sbjct: 541 DQMVPSMTSSFLRIEDEET--SSDVRNSTGDGRAEVPRDVNVNQQPRRDTLNQGFVQSVH 600

Query: 601 PMNARLPYTAGIGLRSGAEDSTAESFSSSDSRRERDGGVVPVWSPPSSSYGEQFVVDENG 660
             N+  P+    GL +  EDSTAES  SS SRRERDGG+VPVWSPP+SSY EQFV DENG
Sbjct: 601 NDNSLPPFNVVRGL-ANVEDSTAES--SSSSRRERDGGIVPVWSPPASSYSEQFVGDENG 660

Query: 661 IGTSSSFLQGHQQTHQIINWRRLSQTG 684
           IG +SS+L  H Q+HQI+NWRRL QTG
Sbjct: 661 IGATSSYLPRHPQSHQILNWRRLPQTG 681

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CRY1_ARATH0.0e+0077.15Cryptochrome-1 OS=Arabidopsis thaliana GN=CRY1 PE=1 SV=2[more]
CRY2_ARATH8.3e-18959.92Cryptochrome-2 OS=Arabidopsis thaliana GN=CRY2 PE=1 SV=2[more]
CRY1_SINAL1.9e-17759.67Cryptochrome-1 OS=Sinapis alba GN=PHR1 PE=2 SV=1[more]
PHRA_AGRFC4.9e-8839.46Deoxyribodipyrimidine photo-lyase OS=Agrobacterium fabrum (strain C58 / ATCC 339... [more]
PHR_STRGR6.4e-5632.92Deoxyribodipyrimidine photo-lyase OS=Streptomyces griseus GN=phr PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LDY1_CUCSA0.0e+0092.69Uncharacterized protein OS=Cucumis sativus GN=Csa_3G889670 PE=4 SV=1[more]
B9GUW2_POPTR0.0e+0083.55Cryptochrome 1 family protein OS=Populus trichocarpa GN=POPTR_0002s09730g PE=4 S... [more]
G1FMC8_POPTN0.0e+0083.41Cryptochrome 1.2 OS=Populus tremula GN=CRY1.2 PE=4 SV=1[more]
A0A061FGG0_THECC0.0e+0083.11CRY1 isoform 1 OS=Theobroma cacao GN=TCM_034899 PE=4 SV=1[more]
G1FMC7_POPTN0.0e+0082.97Cryptochrome 1.1 OS=Populus tremula GN=CRY1.1 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G08920.10.0e+0077.15 cryptochrome 1[more]
AT1G04400.24.7e-19059.92 cryptochrome 2[more]
AT3G15620.12.5e-4228.79 DNA photolyase family protein[more]
AT5G24850.11.2e-3128.21 cryptochrome 3[more]
AT2G47590.14.9e-0624.00 photolyase/blue-light receptor 2[more]
Match NameE-valueIdentityDescription
gi|659132502|ref|XP_008466232.1|0.0e+0092.69PREDICTED: cryptochrome-1 isoform X1 [Cucumis melo][more]
gi|449437020|ref|XP_004136290.1|0.0e+0092.69PREDICTED: cryptochrome-1 isoform X2 [Cucumis sativus][more]
gi|659132506|ref|XP_008466234.1|0.0e+0092.93PREDICTED: cryptochrome-1 isoform X3 [Cucumis melo][more]
gi|778687351|ref|XP_011652552.1|0.0e+0092.93PREDICTED: cryptochrome-1 isoform X3 [Cucumis sativus][more]
gi|224063235|ref|XP_002301054.1|0.0e+0083.55cryptochrome 1 family protein [Populus trichocarpa][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002081Cryptochrome/DNA_photolyase_1
IPR005101Cryptochr/Photolyase_FAD-bd
IPR006050DNA_photolyase_N
IPR014134Cryptochrome_pln
IPR014729Rossmann-like_a/b/a_fold
IPR018394DNA_photolyase_1_CS_C
IPR020978Cryptochrome_C
Vocabulary: Biological Process
TermDefinition
GO:0009785blue light signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0009882blue light photoreceptor activity
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046283 anthocyanin-containing compound metabolic process
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0010155 regulation of proton transport
biological_process GO:0010118 stomatal movement
biological_process GO:0009785 blue light signaling pathway
biological_process GO:0009414 response to water deprivation
biological_process GO:0051510 regulation of unidimensional cell growth
biological_process GO:0010343 singlet oxygen-mediated programmed cell death
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0009640 photomorphogenesis
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006281 DNA repair
biological_process GO:0009583 detection of light stimulus
biological_process GO:0010617 circadian regulation of calcium ion oscillation
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0009882 blue light photoreceptor activity
molecular_function GO:0003913 DNA photolyase activity
molecular_function GO:0042802 identical protein binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0042803 protein homodimerization activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G016510.1CmoCh01G016510.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002081Cryptochrome/DNA photolyase class 1PRINTSPR00147DNAPHOTLYASEcoord: 352..370
score: 5.9E-11coord: 332..348
score: 5.9E-11coord: 391..405
score: 5.9
IPR005101Cryptochrome/DNA photolyase, FAD-binding domainPFAMPF03441FAD_binding_7coord: 283..481
score: 7.7
IPR005101Cryptochrome/DNA photolyase, FAD-binding domainunknownSSF48173Cryptochrome/photolyase FAD-binding domaincoord: 192..488
score: 1.96
IPR006050DNA photolyase, N-terminalPFAMPF00875DNA_photolyasecoord: 7..161
score: 1.2
IPR006050DNA photolyase, N-terminalPROFILEPS51645PHR_CRY_ALPHA_BETAcoord: 5..134
score: 34
IPR006050DNA photolyase, N-terminalunknownSSF52425Cryptochrome/photolyase, N-terminal domaincoord: 7..176
score: 9.94
IPR014134Cryptochrome, plantTIGRFAMsTIGR02766TIGR02766coord: 6..482
score: 1.0E
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3DG3DSA:3.40.50.620coord: 4..164
score: 2.3
IPR018394Cryptochrome/DNA photolyase class 1, conserved site, C-terminalPROSITEPS00394DNA_PHOTOLYASES_1_1coord: 332..344
scor
IPR018394Cryptochrome/DNA photolyase class 1, conserved site, C-terminalPROSITEPS00691DNA_PHOTOLYASES_1_2coord: 352..371
scor
IPR020978Cryptochrome C-terminalPFAMPF12546Cryptochrome_Ccoord: 511..625
score: 7.6
NoneNo IPR availableunknownCoilCoilcoord: 470..490
scor
NoneNo IPR availableGENE3DG3DSA:1.10.579.10coord: 292..485
score: 6.2
NoneNo IPR availableGENE3DG3DSA:1.25.40.80coord: 206..291
score: 1.9
NoneNo IPR availablePANTHERPTHR11455CRYPTOCHROMEcoord: 1..548
score:
NoneNo IPR availablePANTHERPTHR11455:SF24CRYPTOCHROME-1coord: 1..548
score: