CmoCh01G015340 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCGTGTGTCACGTTGGCAAGGATTCATTTCCAAATCTCTGCAATTTCCACTTCTTCACTTTCCCCACCAATGTCCGCCGTCTTCCCTTCCTGCTTCCGCCCCTCCGACAATCGCCGCCGCCGCCGCTAATTTCCAGCTCCTCGAATCTCACCACCTGCATTTACCGCACCAATTCCACGTCTACTGGGACTTACGGCGAGCTCGTTTCTCCGCCTCACCGGAACCCCATTCCGGATTCTTCATCGCCGTCGTTGTCGACGGCGAGCCGATTCTCCTCGTCGGCGATATGATCAAAGAAGCCTACGCCAAGACCTGAACGGCGAAGCTTCATAACTCACAAACACTAATCCTGAAAAGGGAACACGTGATTGCGCACAATATCTACACCACGCAGGCGAAATTCGGCGGCCAAATCCGAGAAATCGAGATCGACGGCGGCGAATTAGGGCTGTCGTTTAGCGTCGACGGGAAATGTGTTGTGCAAATCAAGCGGCTGAACTGGAAATTCAGAGGAAACGAAAGAATCGAAGTGGCCGGAGTTCCGGTGGAGGTGTATTGGGATGTGTACAATTGGGGTTTCGATTTGGGGAAAGAAAACAGAGGAAATGCATGTTGA ATGGTCGTGTGTCACGTTGGCAAGGATTCATTTCCAAATCTCTGCAATTTCCACTTCTTCACTTTCCCCACCAATGTCCGCCGTCTTCCCTTCCTGCTTCCGCCCCTCCGACAATCGCCGCCGCCGCCGCTAATTTCCAGCTCCTCGAATCTCACCACCTGCATTTACCGCACCAATTCCACGTCTACTGGGACTTACGGCGAGCTCGTTTCTCCGCCTCACCGGAACCCCATTCCGGATTCTTCATCGCCGTCGTTGTCGACGGCGAGCCGATTCTCCTCGGAACACGTGATTGCGCACAATATCTACACCACGCAGGCGAAATTCGGCGGCCAAATCCGAGAAATCGAGATCGACGGCGGCGAATTAGGGCTGTCGTTTAGCGTCGACGGGAAATGTGTTGTGCAAATCAAGCGGCTGAACTGGAAATTCAGAGGAAACGAAAGAATCGAAGTGGCCGGAGTTCCGGTGGAGGTGTATTGGGATGTGTACAATTGGGGTTTCGATTTGGGGAAAGAAAACAGAGGAAATGCATGTTGA ATGGTCGTGTGTCACGTTGGCAAGGATTCATTTCCAAATCTCTGCAATTTCCACTTCTTCACTTTCCCCACCAATGTCCGCCGTCTTCCCTTCCTGCTTCCGCCCCTCCGACAATCGCCGCCGCCGCCGCTAATTTCCAGCTCCTCGAATCTCACCACCTGCATTTACCGCACCAATTCCACGTCTACTGGGACTTACGGCGAGCTCGTTTCTCCGCCTCACCGGAACCCCATTCCGGATTCTTCATCGCCGTCGTTGTCGACGGCGAGCCGATTCTCCTCGGAACACGTGATTGCGCACAATATCTACACCACGCAGGCGAAATTCGGCGGCCAAATCCGAGAAATCGAGATCGACGGCGGCGAATTAGGGCTGTCGTTTAGCGTCGACGGGAAATGTGTTGTGCAAATCAAGCGGCTGAACTGGAAATTCAGAGGAAACGAAAGAATCGAAGTGGCCGGAGTTCCGGTGGAGGTGTATTGGGATGTGTACAATTGGGGTTTCGATTTGGGGAAAGAAAACAGAGGAAATGCATGTTGA
BLAST of CmoCh01G015340 vs. TrEMBL
Match: A0A0A0L0G2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G652140 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 8.4e-31 Identity = 66/91 (72.53%), Postives = 76/91 (83.52%), Query Frame = 1
BLAST of CmoCh01G015340 vs. TrEMBL
Match: A5B4X1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001515 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 4.6e-21 Identity = 50/78 (64.10%), Postives = 60/78 (76.92%), Query Frame = 1
BLAST of CmoCh01G015340 vs. TrEMBL
Match: F6H3J7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g05970 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 4.6e-21 Identity = 50/78 (64.10%), Postives = 60/78 (76.92%), Query Frame = 1
BLAST of CmoCh01G015340 vs. TrEMBL
Match: M5Y307_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021934mg PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 7.9e-21 Identity = 50/79 (63.29%), Postives = 63/79 (79.75%), Query Frame = 1
BLAST of CmoCh01G015340 vs. TrEMBL
Match: A0A067FVM8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016824mg PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 7.9e-21 Identity = 49/86 (56.98%), Postives = 62/86 (72.09%), Query Frame = 1
BLAST of CmoCh01G015340 vs. TAIR10
Match: AT5G11000.1 (AT5G11000.1 Plant protein of unknown function (DUF868)) HSP 1 Score: 96.7 bits (239), Expect = 1.6e-20 Identity = 46/88 (52.27%), Postives = 59/88 (67.05%), Query Frame = 1
BLAST of CmoCh01G015340 vs. TAIR10
Match: AT2G25200.1 (AT2G25200.1 Plant protein of unknown function (DUF868)) HSP 1 Score: 77.8 bits (190), Expect = 7.6e-15 Identity = 33/78 (42.31%), Postives = 51/78 (65.38%), Query Frame = 1
BLAST of CmoCh01G015340 vs. TAIR10
Match: AT4G12690.1 (AT4G12690.1 Plant protein of unknown function (DUF868)) HSP 1 Score: 74.3 bits (181), Expect = 8.4e-14 Identity = 41/94 (43.62%), Postives = 56/94 (59.57%), Query Frame = 1
BLAST of CmoCh01G015340 vs. TAIR10
Match: AT2G04220.1 (AT2G04220.1 Plant protein of unknown function (DUF868)) HSP 1 Score: 72.4 bits (176), Expect = 3.2e-13 Identity = 39/103 (37.86%), Postives = 57/103 (55.34%), Query Frame = 1
BLAST of CmoCh01G015340 vs. TAIR10
Match: AT3G04860.1 (AT3G04860.1 Plant protein of unknown function (DUF868)) HSP 1 Score: 71.6 bits (174), Expect = 5.4e-13 Identity = 40/106 (37.74%), Postives = 60/106 (56.60%), Query Frame = 1
BLAST of CmoCh01G015340 vs. NCBI nr
Match: gi|778697858|ref|XP_004145513.2| (PREDICTED: uncharacterized protein LOC101215936 [Cucumis sativus]) HSP 1 Score: 141.7 bits (356), Expect = 1.2e-30 Identity = 66/91 (72.53%), Postives = 76/91 (83.52%), Query Frame = 1
BLAST of CmoCh01G015340 vs. NCBI nr
Match: gi|659104269|ref|XP_008452874.1| (PREDICTED: uncharacterized protein LOC103493769 [Cucumis melo]) HSP 1 Score: 141.0 bits (354), Expect = 2.1e-30 Identity = 67/91 (73.63%), Postives = 75/91 (82.42%), Query Frame = 1
BLAST of CmoCh01G015340 vs. NCBI nr
Match: gi|1009134973|ref|XP_015884735.1| (PREDICTED: uncharacterized protein LOC107420324 [Ziziphus jujuba]) HSP 1 Score: 114.4 bits (285), Expect = 2.1e-22 Identity = 58/92 (63.04%), Postives = 69/92 (75.00%), Query Frame = 1
BLAST of CmoCh01G015340 vs. NCBI nr
Match: gi|470111411|ref|XP_004291941.1| (PREDICTED: uncharacterized protein LOC101293553 [Fragaria vesca subsp. vesca]) HSP 1 Score: 112.5 bits (280), Expect = 7.9e-22 Identity = 56/87 (64.37%), Postives = 65/87 (74.71%), Query Frame = 1
BLAST of CmoCh01G015340 vs. NCBI nr
Match: gi|657971772|ref|XP_008377675.1| (PREDICTED: uncharacterized protein LOC103440754 [Malus domestica]) HSP 1 Score: 111.7 bits (278), Expect = 1.3e-21 Identity = 51/79 (64.56%), Postives = 61/79 (77.22%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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