CmoCh01G015340 (gene) Cucurbita moschata (Rifu)

NameCmoCh01G015340
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPlant protein of unknown function (DUF868)
LocationCmo_Chr01 : 11837913 .. 11838532 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCGTGTGTCACGTTGGCAAGGATTCATTTCCAAATCTCTGCAATTTCCACTTCTTCACTTTCCCCACCAATGTCCGCCGTCTTCCCTTCCTGCTTCCGCCCCTCCGACAATCGCCGCCGCCGCCGCTAATTTCCAGCTCCTCGAATCTCACCACCTGCATTTACCGCACCAATTCCACGTCTACTGGGACTTACGGCGAGCTCGTTTCTCCGCCTCACCGGAACCCCATTCCGGATTCTTCATCGCCGTCGTTGTCGACGGCGAGCCGATTCTCCTCGTCGGCGATATGATCAAAGAAGCCTACGCCAAGACCTGAACGGCGAAGCTTCATAACTCACAAACACTAATCCTGAAAAGGGAACACGTGATTGCGCACAATATCTACACCACGCAGGCGAAATTCGGCGGCCAAATCCGAGAAATCGAGATCGACGGCGGCGAATTAGGGCTGTCGTTTAGCGTCGACGGGAAATGTGTTGTGCAAATCAAGCGGCTGAACTGGAAATTCAGAGGAAACGAAAGAATCGAAGTGGCCGGAGTTCCGGTGGAGGTGTATTGGGATGTGTACAATTGGGGTTTCGATTTGGGGAAAGAAAACAGAGGAAATGCATGTTGA

mRNA sequence

ATGGTCGTGTGTCACGTTGGCAAGGATTCATTTCCAAATCTCTGCAATTTCCACTTCTTCACTTTCCCCACCAATGTCCGCCGTCTTCCCTTCCTGCTTCCGCCCCTCCGACAATCGCCGCCGCCGCCGCTAATTTCCAGCTCCTCGAATCTCACCACCTGCATTTACCGCACCAATTCCACGTCTACTGGGACTTACGGCGAGCTCGTTTCTCCGCCTCACCGGAACCCCATTCCGGATTCTTCATCGCCGTCGTTGTCGACGGCGAGCCGATTCTCCTCGGAACACGTGATTGCGCACAATATCTACACCACGCAGGCGAAATTCGGCGGCCAAATCCGAGAAATCGAGATCGACGGCGGCGAATTAGGGCTGTCGTTTAGCGTCGACGGGAAATGTGTTGTGCAAATCAAGCGGCTGAACTGGAAATTCAGAGGAAACGAAAGAATCGAAGTGGCCGGAGTTCCGGTGGAGGTGTATTGGGATGTGTACAATTGGGGTTTCGATTTGGGGAAAGAAAACAGAGGAAATGCATGTTGA

Coding sequence (CDS)

ATGGTCGTGTGTCACGTTGGCAAGGATTCATTTCCAAATCTCTGCAATTTCCACTTCTTCACTTTCCCCACCAATGTCCGCCGTCTTCCCTTCCTGCTTCCGCCCCTCCGACAATCGCCGCCGCCGCCGCTAATTTCCAGCTCCTCGAATCTCACCACCTGCATTTACCGCACCAATTCCACGTCTACTGGGACTTACGGCGAGCTCGTTTCTCCGCCTCACCGGAACCCCATTCCGGATTCTTCATCGCCGTCGTTGTCGACGGCGAGCCGATTCTCCTCGGAACACGTGATTGCGCACAATATCTACACCACGCAGGCGAAATTCGGCGGCCAAATCCGAGAAATCGAGATCGACGGCGGCGAATTAGGGCTGTCGTTTAGCGTCGACGGGAAATGTGTTGTGCAAATCAAGCGGCTGAACTGGAAATTCAGAGGAAACGAAAGAATCGAAGTGGCCGGAGTTCCGGTGGAGGTGTATTGGGATGTGTACAATTGGGGTTTCGATTTGGGGAAAGAAAACAGAGGAAATGCATGTTGA
BLAST of CmoCh01G015340 vs. TrEMBL
Match: A0A0A0L0G2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G652140 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 8.4e-31
Identity = 66/91 (72.53%), Postives = 76/91 (83.52%), Query Frame = 1

Query: 95  EHVIAHNIYTTQAKFGGQIREIEIDGG-------ELGLSFSVDGKCVVQIKRLNWKFRGN 154
           EHV AH +YTT+AKF GQIREI+ID G       +LGLSFSVDGK V++IKRL WKFRGN
Sbjct: 173 EHVTAHKVYTTKAKFAGQIREIQIDCGFSNYNDDDLGLSFSVDGKRVLEIKRLKWKFRGN 232

Query: 155 ERIEVAGVPVEVYWDVYNWGFDLGKENRGNA 179
           ERIEVAGVP++VYWDVYNW F+L KE+RGNA
Sbjct: 233 ERIEVAGVPMDVYWDVYNWVFELEKESRGNA 263

BLAST of CmoCh01G015340 vs. TrEMBL
Match: A5B4X1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001515 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.6e-21
Identity = 50/78 (64.10%), Postives = 60/78 (76.92%), Query Frame = 1

Query: 95  EHVIAHNIYTTQAKFGGQIREIEID---GGELGLSFSVDGKCVVQIKRLNWKFRGNERIE 154
           EHV  + +YTT+A FGG+ REI ID   G +  LSFSVD K V+QIKRL WKFRGNE+IE
Sbjct: 188 EHVFGNKVYTTRASFGGKTREISIDCSVGDDPRLSFSVDRKRVLQIKRLKWKFRGNEKIE 247

Query: 155 VAGVPVEVYWDVYNWGFD 170
           V G+P++V WDVYNW FD
Sbjct: 248 VDGIPIQVSWDVYNWLFD 265

BLAST of CmoCh01G015340 vs. TrEMBL
Match: F6H3J7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g05970 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.6e-21
Identity = 50/78 (64.10%), Postives = 60/78 (76.92%), Query Frame = 1

Query: 95  EHVIAHNIYTTQAKFGGQIREIEID---GGELGLSFSVDGKCVVQIKRLNWKFRGNERIE 154
           EHV  + +YTT+A FGG+ REI ID   G +  LSFSVD K V+QIKRL WKFRGNE+IE
Sbjct: 188 EHVFGNKVYTTRASFGGKTREISIDCSVGDDPRLSFSVDRKRVLQIKRLKWKFRGNEKIE 247

Query: 155 VAGVPVEVYWDVYNWGFD 170
           V G+P++V WDVYNW FD
Sbjct: 248 VDGIPIQVSWDVYNWLFD 265

BLAST of CmoCh01G015340 vs. TrEMBL
Match: M5Y307_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021934mg PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 7.9e-21
Identity = 50/79 (63.29%), Postives = 63/79 (79.75%), Query Frame = 1

Query: 95  EHVIAHNIYTTQAKFGGQIREIEID---GGELG-LSFSVDGKCVVQIKRLNWKFRGNERI 154
           EHV+A  IYTT+A+FGG++R I+ID   G +L  L FSVDG+ V+QIKRL WKFRGNERI
Sbjct: 256 EHVVAKKIYTTKARFGGKLRSIQIDCGYGNDLSRLCFSVDGQRVLQIKRLKWKFRGNERI 315

Query: 155 EVAGVPVEVYWDVYNWGFD 170
           EV G P+++ WDVYNW F+
Sbjct: 316 EVDGAPLQISWDVYNWLFE 334

BLAST of CmoCh01G015340 vs. TrEMBL
Match: A0A067FVM8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016824mg PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 7.9e-21
Identity = 49/86 (56.98%), Postives = 62/86 (72.09%), Query Frame = 1

Query: 95  EHVIAHNIYTTQAKFGGQIREIEID---GGELGLSFSVDGKCVVQIKRLNWKFRGNERIE 154
           EHV  + +YTT+AKFGG+ R++ ID     +  L FSVD   V+QIKRL WKFRGNERI+
Sbjct: 196 EHVFGNKVYTTKAKFGGKTRDVSIDCSTSNDARLCFSVDNVRVLQIKRLKWKFRGNERID 255

Query: 155 VAGVPVEVYWDVYNWGFDLGKENRGN 178
           V GVPV++ WDVYNW FD  K N+ +
Sbjct: 256 VDGVPVQISWDVYNWLFDDFKSNKND 281

BLAST of CmoCh01G015340 vs. TAIR10
Match: AT5G11000.1 (AT5G11000.1 Plant protein of unknown function (DUF868))

HSP 1 Score: 96.7 bits (239), Expect = 1.6e-20
Identity = 46/88 (52.27%), Postives = 59/88 (67.05%), Query Frame = 1

Query: 84  PSLSTASRFSSEHVIAHNIYTTQAKFGGQIREIEID---GGELGLSFSVDGKCVVQIKRL 143
           P+   A     EHV    ++TT+A+FGG+ REI ID     +  L FSVD K V+QIKRL
Sbjct: 165 PTNPQALLLRKEHVFGARVFTTKARFGGKNREISIDCRVDEDAKLCFSVDSKQVLQIKRL 224

Query: 144 NWKFRGNERIEVAGVPVEVYWDVYNWGF 169
            WKFRGNE++E+ GV V++ WDVYNW F
Sbjct: 225 RWKFRGNEKVEIDGVHVQISWDVYNWLF 252

BLAST of CmoCh01G015340 vs. TAIR10
Match: AT2G25200.1 (AT2G25200.1 Plant protein of unknown function (DUF868))

HSP 1 Score: 77.8 bits (190), Expect = 7.6e-15
Identity = 33/78 (42.31%), Postives = 51/78 (65.38%), Query Frame = 1

Query: 95  EHVIAHNIYTTQAKFGGQIREIEID----GGELGLSFSVDGKCVVQIKRLNWKFRGNERI 154
           E++  + +Y+T+    G++REI ID      +  L FSVD K V++I +L WKFRGN +I
Sbjct: 180 ENLFGNRVYSTKIMIQGKLREISIDVKVVNDDASLRFSVDDKSVLKISQLQWKFRGNTKI 239

Query: 155 EVAGVPVEVYWDVYNWGF 169
            + GV +++ WDV+NW F
Sbjct: 240 VIDGVTIQISWDVFNWLF 257

BLAST of CmoCh01G015340 vs. TAIR10
Match: AT4G12690.1 (AT4G12690.1 Plant protein of unknown function (DUF868))

HSP 1 Score: 74.3 bits (181), Expect = 8.4e-14
Identity = 41/94 (43.62%), Postives = 56/94 (59.57%), Query Frame = 1

Query: 82  SSPSLSTASRF-SSEHVIAHNIYTTQAKFGGQIREIEI------DGGELGLSFSVDGKCV 141
           S PSL  A+ F   E+V    I++T+AKF  + RE EI         E  +  SVDG  +
Sbjct: 143 SRPSLVDAALFYKKENVFGKKIFSTRAKFHDRKREHEIVVESSTGAKEPEMWISVDGIVL 202

Query: 142 VQIKRLNWKFRGNERIEVAGVPVEVYWDVYNWGF 169
           VQ++ L WKFRGN+ + V   PV+V+WDVY+W F
Sbjct: 203 VQVRNLQWKFRGNQTVLVDKEPVQVFWDVYDWLF 236

BLAST of CmoCh01G015340 vs. TAIR10
Match: AT2G04220.1 (AT2G04220.1 Plant protein of unknown function (DUF868))

HSP 1 Score: 72.4 bits (176), Expect = 3.2e-13
Identity = 39/103 (37.86%), Postives = 57/103 (55.34%), Query Frame = 1

Query: 82  SSPSLSTASRF-SSEHVIAHNIYTTQAKFGGQIREIEI-------DGGELGLSFSVDGKC 141
           S P+L  A+ F   E+V     +TT+AKF  + +E EI          E  +  S+DG  
Sbjct: 147 SRPALVEAALFYKKENVFGKKCFTTRAKFYDRKKEHEIIVESSTSGPKEPEMWISIDGIV 206

Query: 142 VVQIKRLNWKFRGNERIEVAGVPVEVYWDVYNWGFDLGKENRG 177
           ++Q+K L WKFRGN+ + V   PV+V+WDVY+W F +     G
Sbjct: 207 LIQVKNLQWKFRGNQTVLVDKQPVQVFWDVYDWLFSMPGTGHG 249

BLAST of CmoCh01G015340 vs. TAIR10
Match: AT3G04860.1 (AT3G04860.1 Plant protein of unknown function (DUF868))

HSP 1 Score: 71.6 bits (174), Expect = 5.4e-13
Identity = 40/106 (37.74%), Postives = 60/106 (56.60%), Query Frame = 1

Query: 81  SSSPSLSTASRF--SSEHVIAHNIYTTQAKFGGQ------IREIEIDGGELGLSFSVDGK 140
           +++PS S  + F    EHV     + T+A+F G       + E +    +  L   VDGK
Sbjct: 145 NAAPSSSLGAVFIAKKEHVFGKRTFATKAQFSGDGKTHDLVIECDTSLSDPCLIVRVDGK 204

Query: 141 CVVQIKRLNWKFRGNERIEVAGVPVEVYWDVYNWGFDLGKENRGNA 179
            ++Q++RL+WKFRGN+ I V  + VEV WDV++W F L   + GNA
Sbjct: 205 ILMQVQRLHWKFRGNDTIIVNRISVEVLWDVHSWFFGL-PSSPGNA 249

BLAST of CmoCh01G015340 vs. NCBI nr
Match: gi|778697858|ref|XP_004145513.2| (PREDICTED: uncharacterized protein LOC101215936 [Cucumis sativus])

HSP 1 Score: 141.7 bits (356), Expect = 1.2e-30
Identity = 66/91 (72.53%), Postives = 76/91 (83.52%), Query Frame = 1

Query: 95  EHVIAHNIYTTQAKFGGQIREIEIDGG-------ELGLSFSVDGKCVVQIKRLNWKFRGN 154
           EHV AH +YTT+AKF GQIREI+ID G       +LGLSFSVDGK V++IKRL WKFRGN
Sbjct: 173 EHVTAHKVYTTKAKFAGQIREIQIDCGFSNYNDDDLGLSFSVDGKRVLEIKRLKWKFRGN 232

Query: 155 ERIEVAGVPVEVYWDVYNWGFDLGKENRGNA 179
           ERIEVAGVP++VYWDVYNW F+L KE+RGNA
Sbjct: 233 ERIEVAGVPMDVYWDVYNWVFELEKESRGNA 263

BLAST of CmoCh01G015340 vs. NCBI nr
Match: gi|659104269|ref|XP_008452874.1| (PREDICTED: uncharacterized protein LOC103493769 [Cucumis melo])

HSP 1 Score: 141.0 bits (354), Expect = 2.1e-30
Identity = 67/91 (73.63%), Postives = 75/91 (82.42%), Query Frame = 1

Query: 95  EHVIAHNIYTTQAKFGGQIREIEIDGG-------ELGLSFSVDGKCVVQIKRLNWKFRGN 154
           EHV AH IYTT+AKF GQIREI+ID G       +LGLSFSVDGK V++IKRL WKFRGN
Sbjct: 170 EHVTAHKIYTTKAKFAGQIREIQIDCGFSNYNDDDLGLSFSVDGKRVLEIKRLKWKFRGN 229

Query: 155 ERIEVAGVPVEVYWDVYNWGFDLGKENRGNA 179
           ERIEVAGV ++VYWDVYNW F+L KENRGNA
Sbjct: 230 ERIEVAGVQMDVYWDVYNWVFELEKENRGNA 260

BLAST of CmoCh01G015340 vs. NCBI nr
Match: gi|1009134973|ref|XP_015884735.1| (PREDICTED: uncharacterized protein LOC107420324 [Ziziphus jujuba])

HSP 1 Score: 114.4 bits (285), Expect = 2.1e-22
Identity = 58/92 (63.04%), Postives = 69/92 (75.00%), Query Frame = 1

Query: 81  SSSPSLSTASRFSSEHVIAHNIYTTQAKFGGQIREIEIDGGE---LGLSFSVDGKCVVQI 140
           S SP +    R   EHVIA+ IYTT+AKFGG+IREI+ID G      LSFSVD K V+QI
Sbjct: 160 SPSPQVLFLKR---EHVIANKIYTTRAKFGGKIREIQIDCGFNDCTRLSFSVDNKRVLQI 219

Query: 141 KRLNWKFRGNERIEVAGVPVEVYWDVYNWGFD 170
           KRL WKFRGNER+E+ GVPV++ WDVYNW F+
Sbjct: 220 KRLKWKFRGNERVEIDGVPVQISWDVYNWLFE 248

BLAST of CmoCh01G015340 vs. NCBI nr
Match: gi|470111411|ref|XP_004291941.1| (PREDICTED: uncharacterized protein LOC101293553 [Fragaria vesca subsp. vesca])

HSP 1 Score: 112.5 bits (280), Expect = 7.9e-22
Identity = 56/87 (64.37%), Postives = 65/87 (74.71%), Query Frame = 1

Query: 95  EHVIAHNIYTTQAKFGGQIREIEIDGGELG----LSFSVDGKCVVQIKRLNWKFRGNERI 154
           EHV+A NIYTT+AK GG+IR+I+I+ G       LSFSVD K V+QIKRL WKFRGNERI
Sbjct: 177 EHVVAKNIYTTKAKLGGRIRDIQIECGHNDDFSRLSFSVDNKRVLQIKRLKWKFRGNERI 236

Query: 155 EVAGVPVEVYWDVYNWGFDLGKENRGN 178
           EV GVP+ + WDVYNW F    EN GN
Sbjct: 237 EVDGVPMHISWDVYNWLF----ENDGN 259

BLAST of CmoCh01G015340 vs. NCBI nr
Match: gi|657971772|ref|XP_008377675.1| (PREDICTED: uncharacterized protein LOC103440754 [Malus domestica])

HSP 1 Score: 111.7 bits (278), Expect = 1.3e-21
Identity = 51/79 (64.56%), Postives = 61/79 (77.22%), Query Frame = 1

Query: 95  EHVIAHNIYTTQAKFGGQIREIEIDGGELG----LSFSVDGKCVVQIKRLNWKFRGNERI 154
           EHV+A  IYTT+A+FGG++REI ID G       L FSVDG+ V+QIKRL WKFRGNERI
Sbjct: 173 EHVVAKKIYTTKARFGGKLREIRIDYGSSADPTRLCFSVDGQIVLQIKRLKWKFRGNERI 232

Query: 155 EVAGVPVEVYWDVYNWGFD 170
           EV G PV++ WDVYNW F+
Sbjct: 233 EVDGTPVQISWDVYNWLFE 251

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L0G2_CUCSA8.4e-3172.53Uncharacterized protein OS=Cucumis sativus GN=Csa_4G652140 PE=4 SV=1[more]
A5B4X1_VITVI4.6e-2164.10Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001515 PE=4 SV=1[more]
F6H3J7_VITVI4.6e-2164.10Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g05970 PE=4 SV=... [more]
M5Y307_PRUPE7.9e-2163.29Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021934mg PE=4 SV=1[more]
A0A067FVM8_CITSI7.9e-2156.98Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016824mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G11000.11.6e-2052.27 Plant protein of unknown function (DUF868)[more]
AT2G25200.17.6e-1542.31 Plant protein of unknown function (DUF868)[more]
AT4G12690.18.4e-1443.62 Plant protein of unknown function (DUF868)[more]
AT2G04220.13.2e-1337.86 Plant protein of unknown function (DUF868)[more]
AT3G04860.15.4e-1337.74 Plant protein of unknown function (DUF868)[more]
Match NameE-valueIdentityDescription
gi|778697858|ref|XP_004145513.2|1.2e-3072.53PREDICTED: uncharacterized protein LOC101215936 [Cucumis sativus][more]
gi|659104269|ref|XP_008452874.1|2.1e-3073.63PREDICTED: uncharacterized protein LOC103493769 [Cucumis melo][more]
gi|1009134973|ref|XP_015884735.1|2.1e-2263.04PREDICTED: uncharacterized protein LOC107420324 [Ziziphus jujuba][more]
gi|470111411|ref|XP_004291941.1|7.9e-2264.37PREDICTED: uncharacterized protein LOC101293553 [Fragaria vesca subsp. vesca][more]
gi|657971772|ref|XP_008377675.1|1.3e-2164.56PREDICTED: uncharacterized protein LOC103440754 [Malus domestica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008586DUF868_pln
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005886 plasma membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G015340.1CmoCh01G015340.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008586Protein of unknown function DUF868, plantPFAMPF05910DUF868coord: 93..172
score: 5.9
NoneNo IPR availablePANTHERPTHR31972FAMILY NOT NAMEDcoord: 95..169
score: 9.3
NoneNo IPR availablePANTHERPTHR31972:SF3SUBFAMILY NOT NAMEDcoord: 95..169
score: 9.3

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh01G015340CmoCh09G004300Cucurbita moschata (Rifu)cmocmoB012
CmoCh01G015340CmoCh12G003090Cucurbita moschata (Rifu)cmocmoB142
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh01G015340Silver-seed gourdcarcmoB0922
CmoCh01G015340Cucurbita moschata (Rifu)cmocmoB106
CmoCh01G015340Cucurbita maxima (Rimu)cmacmoB185
CmoCh01G015340Watermelon (Charleston Gray)cmowcgB437
CmoCh01G015340Watermelon (97103) v1cmowmB418
CmoCh01G015340Cucurbita pepo (Zucchini)cmocpeB448