CmoCh01G015110 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G015110
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ubiquitin-fold modifier-conjugating enzyme 1
Location	Cmo_Chr01 : 11679958 .. 11681948 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGTTGGGATCCGAATACCAAGTCGACGCTCACCCAAATTCCTCTGCTAACGACGAAAGCTGGGCCGAGAGATGGTGCGGCATGGACGCAGAGGCTGAAGGAGGAGTACAAGGCATTGATCGCCTACACTCAGATGAACAAGTCAAATGATAATGACTGGTTTCGGATCTCAGCTGCTAATCCAGAAGGAACACGATGGACCGGCAAGTGCTGGTACGTGCACAACCTTCTCAAGTACGAATTCGATCTTCAATTCGATATTCCTATCACGTATCCATCCACAGCGCCAGAGCTGGAGCTGCCGGAGCTCGATGGAAAAACTCAGAAGGTTGGAATTTCGTTTGGTTTTCTTATTTTTGAAGAATTTTCTTTATTCGTAGTTGAATTTCGAAACCTTTTTTAACTCGTTGTGGATTGTTTCAGATGTACAGAGGAGGAAAGATCTGCTTAACCATTCATTTCAAGCCTCTCTGGGCGAAAAACAGGTAACTAAGTCTAAATTCTTCTAAATGACGGTAGAGACATAGATCTTGAAGTTCACGTGTTTGCAGAATTGGTTACTTTCTGGAAAGGCTTAACGAGTGGATATAAGTTTAACTTCGTGTTTGCATGCAATTGAAAGTTAAAGCAGGCTCAGGTTTAGAGCTAACTTAGAATGCATGCTTGATTCGATATGCGTCTCACTCAGCAGTCTCTGCCTTTCCCAACTTGCTGACAGTGAACGGCTCATTTTGAACGTAAACCCATTGGTTCTCTGTAACCCTTTATGTCAATTGCCAGCAAATATTGTCTGCTTTAACCCGTTACGAATTGTCATCAGCCTCACGGTTTTAAAACATGTCTATTAGGGAGAGTTTTCTACACGCTTATAAGAAATGTTTTGTTCTCCCCTCTAACCGACATGGGATCTCACATTCTTATCCCAGTTGTTCTACTTTGGAACCAGATTTGTTCACAATTTATCTGATAAAAACTTTATCTTACATGAATCATGTGATCGCTTTTGGATCGGTACGTTTTTTCTATGACCAGTTAGATCAATACGATTAGGATGTTCTTCACGTTTATGTTTCCTTATCCATGCAAGATTCAGCTTCATTCCTGCTAATGGGACCTGTACAAGTCCCAAACTCTCATTTCATTAGTGTCATTTGACTATCTTGTGTCCGTTATTCTTGCGAAGGAGTCAAAATCTTCAAAATAGTACTGTTTTGGAGCTGTTGTTGGGCATTACACATTCTTTTTCAGCTTGCCATTGTCATAGCCAACCTTATTTAGTATCTGTTTTGCAGTCCTAGGTTTGGAATTGCTCATGCTCTTTGTTTGGGACTTGCACCGTGGCTCGCTGCTGAGGTTCCAATTCTCGTTGATTCTGGCATGATCAAGCACAAAGACAACACAACATCGACCAGTGAATCTTAACATGTGTATGAACTTGTCATGGCTACAAAAGTGAACTTTTGACCTCATATATTTCCCAATGACTGGAAAATAAACTTATCATCCCCCAAATTTAACTGCGGAGGTTGCAGCCCTCCAGTTACATTTACACAGTCATATATTTACTGGGAGTCAGTTCATAAATGTTGATGCATCAGCTAATCATGGTCTGTTTACCTTTACCCTTTCTTGGGATTTATTTATTTACTTTTACCCTTAAAAGCATAGTAGTAGCGGAAATGTGGGATGCGAATTGTTTTTTTTATGAATGCAGCTGCTTAATACTAGTGAATATTTTTTCAGTGTTGGCCAATAATTCGACCAAAACATAGACCATCCACGGTATGTTTATACCAGCTCGATGTATTTTATTGAATTGAGTATAATATACTAGATCCACTTATTGTGTGAGATTCCACATTTATTGGAGAAGAGAATGAGTGTCAATGAGGATGTTGAGCCCGGATTCACTTATTGTGTGAGAGTACACATCTATTGGAGAGGAGAACGAGTGTCAAAGAGGATGTTGAGCCCAGAAGATGGTGG

mRNA sequence

ATGGAGGGTTGGGATCCGAATACCAAGTCGACGCTCACCCAAATTCCTCTGCTAACGACGAAAGCTGGGCCGAGAGATGGTGCGGCATGGACGCAGAGGCTGAAGGAGGAGTACAAGGCATTGATCGCCTACACTCAGATGAACAAGTCAAATGATAATGACTGGTTTCGGATCTCAGCTGCTAATCCAGAAGGAACACGATGGACCGGCAAGTGCTGGTACGTGCACAACCTTCTCAAGTACGAATTCGATCTTCAATTCGATATTCCTATCACGTATCCATCCACAGCGCCAGAGCTGGAGCTGCCGGAGCTCGATGGAAAAACTCAGAAGATGTACAGAGGAGGAAAGATCTGCTTAACCATTCATTTCAAGCCTCTCTGGGCGAAAAACAGTCCTAGGTTTGGAATTGCTCATGCTCTTTGTTTGGGACTTGCACCGTGGCTCGCTGCTGAGGTTCCAATTCTCGTTGATTCTGGCATGATCAAGCACAAAGACAACACAACATCGACCAGTGAATCTTAACATGTGTATGAACTTGTCATGGCTACAAAAGTGAACTTTTGACCTCATATATTTCCCAATGACTGGAAAATAAACTTATCATCCCCCAAATTTAACTGCGGAGGTTGCAGCCCTCCAGTTACATTTACACAGTCATATATTTACTGGGAGTCAGTTCATAAATGTTGATGCATCAGCTAATCATGGTCTGTTTACCTTTACCCTTTCTTGGGATTTATTTATTTACTTTTACCCTTAAAAGCATAGTAGTAGCGGAAATGTGGGATGCGAATTGTTTTTTTTATGAATGCAGCTGCTTAATACTAGTGAATATTTTTTCAGTGTTGGCCAATAATTCGACCAAAACATAGACCATCCACGGTATGTTTATACCAGCTCGATGTATTTTATTGAATTGAGTATAATATACTAGATCCACTTATTGTGTGAGATTCCACATTTATTGGAGAAGAGAATGAGTGTCAATGAGGATGTTGAGCCCGGATTCACTTATTGTGTGAGAGTACACATCTATTGGAGAGGAGAACGAGTGTCAAAGAGGATGTTGAGCCCAGAAGATGGTGG

Coding sequence (CDS)

ATGGAGGGTTGGGATCCGAATACCAAGTCGACGCTCACCCAAATTCCTCTGCTAACGACGAAAGCTGGGCCGAGAGATGGTGCGGCATGGACGCAGAGGCTGAAGGAGGAGTACAAGGCATTGATCGCCTACACTCAGATGAACAAGTCAAATGATAATGACTGGTTTCGGATCTCAGCTGCTAATCCAGAAGGAACACGATGGACCGGCAAGTGCTGGTACGTGCACAACCTTCTCAAGTACGAATTCGATCTTCAATTCGATATTCCTATCACGTATCCATCCACAGCGCCAGAGCTGGAGCTGCCGGAGCTCGATGGAAAAACTCAGAAGATGTACAGAGGAGGAAAGATCTGCTTAACCATTCATTTCAAGCCTCTCTGGGCGAAAAACAGTCCTAGGTTTGGAATTGCTCATGCTCTTTGTTTGGGACTTGCACCGTGGCTCGCTGCTGAGGTTCCAATTCTCGTTGATTCTGGCATGATCAAGCACAAAGACAACACAACATCGACCAGTGAATCTTAA

Homology

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BLAST of CmoCh01G015110 vs. Swiss-Prot
Match: UFC1_ARATH (Ubiquitin-fold modifier-conjugating enzyme 1 OS=Arabidopsis thaliana GN=At1g27530 PE=2 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 3.2e-97
Identity = 159/174 (91.38%), Postives = 170/174 (97.70%), Query Frame = 1


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWDPNTKSTLT+IPLLTTKAGPRDGAAWTQRLKEEYK+LIAYTQMNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTRIPLLTTKAGPRDGAAWTQRLKEEYKSLIAYTQMNKSNDNDWFRISA 60

Query: 61  ANPEGTRWTGKCWYVHNLLKYEFDLQFDIPITYPSTAPELELPELDGKTQKMYRGGKICL 120
           +NPEGTRWTGKCWYVHNLLKYEFDLQFDIPITYP+TAPELELPE+DGKTQKMYRGGKICL
Sbjct: 61  SNPEGTRWTGKCWYVHNLLKYEFDLQFDIPITYPATAPELELPEIDGKTQKMYRGGKICL 120

Query: 121 TIHFKPLWAKNSPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNTTSTSES 175
           T+HFKPLWAKN PRFGIAHALCLGLAPWLAAE+PILVDSG IKHKD+  +++ES
Sbjct: 121 TVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEIPILVDSGAIKHKDDAATSAES 174

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BLAST of CmoCh01G015110 vs. Swiss-Prot
Match: UFC1_ORYSJ (Ubiquitin-fold modifier-conjugating enzyme 1 OS=Oryza sativa subsp. japonica GN=Os10g0205200 PE=2 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 3.2e-84
Identity = 137/174 (78.74%), Postives = 153/174 (87.93%), Query Frame = 1


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWD  TKS + +IPLL+T+AGPRDG AW QRLKEEY+ALIAYT +NKS DNDWFRISA
Sbjct: 1   MEGWDKGTKSVVGEIPLLSTRAGPRDGEAWRQRLKEEYRALIAYTSVNKSKDNDWFRISA 60

Query: 61  ANPEGTRWTGKCWYVHNLLKYEFDLQFDIPITYPSTAPELELPELDGKTQKMYRGGKICL 120
           ANPEGTRW G CWYVHNL +YEF LQFDIP+ YP  APE+ELP LDGKT KMYRGGKICL
Sbjct: 61  ANPEGTRWEGTCWYVHNLRRYEFPLQFDIPVAYPQVAPEIELPTLDGKTHKMYRGGKICL 120

Query: 121 TIHFKPLWAKNSPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNTTSTSES 175
           T+HFKPLWAKN PRFGIAHALCLGLAPWLAAEVPILVDSGM+KHKD+  + +++
Sbjct: 121 TVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMVKHKDDEAAPADA 174

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BLAST of CmoCh01G015110 vs. Swiss-Prot
Match: UFC1_ORYSI (Ubiquitin-fold modifier-conjugating enzyme 1 OS=Oryza sativa subsp. indica GN=OsI_33008 PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 3.2e-84
Identity = 137/174 (78.74%), Postives = 153/174 (87.93%), Query Frame = 1


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWD  TKS + +IPLL+T+AGPRDG AW QRLKEEY+ALIAYT +NKS DNDWFRISA
Sbjct: 1   MEGWDKGTKSVVGEIPLLSTRAGPRDGEAWRQRLKEEYRALIAYTSVNKSKDNDWFRISA 60

Query: 61  ANPEGTRWTGKCWYVHNLLKYEFDLQFDIPITYPSTAPELELPELDGKTQKMYRGGKICL 120
           ANPEGTRW G CWYVHNL +YEF LQFDIP+ YP  APE+ELP LDGKT KMYRGGKICL
Sbjct: 61  ANPEGTRWEGTCWYVHNLRRYEFPLQFDIPVAYPQVAPEIELPTLDGKTHKMYRGGKICL 120

Query: 121 TIHFKPLWAKNSPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNTTSTSES 175
           T+HFKPLWAKN PRFGIAHALCLGLAPWLAAEVPILVDSGM+KHKD+  + +++
Sbjct: 121 TVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMVKHKDDEAAPADA 174

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BLAST of CmoCh01G015110 vs. Swiss-Prot
Match: UFC1_DICDI (Ubiquitin-fold modifier-conjugating enzyme 1 OS=Dictyostelium discoideum GN=ufc1 PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 3.1e-71
Identity = 118/163 (72.39%), Postives = 138/163 (84.66%), Query Frame = 1


Query: 5   DPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPE 64
           D +TK T+ QIPLLT KAGPRDG  W  RLKEEY+ALI Y ++NK  DNDWF I + NP 
Sbjct: 2   DNHTKQTVQQIPLLTVKAGPRDGDKWIDRLKEEYQALIKYVEINKKADNDWFNIES-NPL 61

Query: 65  GTRWTGKCWYVHNLLKYEFDLQFDIPITYPSTAPELELPELDGKTQKMYRGGKICLTIHF 124
           GTRW GKCWY++N  KYEFDL+FD+P+TYP TAPE+ +PELDGKT+KMYRGGKICLTIHF
Sbjct: 62  GTRWQGKCWYIYNFKKYEFDLEFDMPVTYPETAPEIAIPELDGKTEKMYRGGKICLTIHF 121

Query: 125 KPLWAKNSPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDN 168
           KPLW++N P FGIAHAL LGLAPWLAAEVP LVD+G+IKHK++
Sbjct: 122 KPLWSRNVPHFGIAHALALGLAPWLAAEVPHLVDNGIIKHKED 163

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BLAST of CmoCh01G015110 vs. Swiss-Prot
Match: UFC1_NEMVE (Ubiquitin-fold modifier-conjugating enzyme 1 OS=Nematostella vectensis GN=v1g214407 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 4.4e-70
Identity = 117/167 (70.06%), Postives = 134/167 (80.24%), Query Frame = 1


Query: 5   DPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPE 64
           D  TK TL  IPLL TKAGPRDG  W  RLKEEY +LI Y   NK  DNDWFR+ + N E
Sbjct: 3   DEATKKTLAAIPLLKTKAGPRDGKDWVDRLKEEYTSLIKYVSNNKEADNDWFRLES-NKE 62

Query: 65  GTRWTGKCWYVHNLLKYEFDLQFDIPITYPSTAPELELPELDGKTQKMYRGGKICLTIHF 124
           GTRW GKCWY+HNLLKYEFD++FDIPITYP+TAPE+ LPELDGKT KMYRGGKIC+T HF
Sbjct: 63  GTRWFGKCWYIHNLLKYEFDVEFDIPITYPTTAPEIALPELDGKTAKMYRGGKICMTDHF 122

Query: 125 KPLWAKNSPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNTTST 172
           KPLW +N PRFGIAHA+ LGL PWLA E+P L++ G+IKHKD + S+
Sbjct: 123 KPLWGRNVPRFGIAHAMALGLGPWLAVEIPDLIEKGLIKHKDKSESS 168

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BLAST of CmoCh01G015110 vs. TrEMBL
Match: A0A0A0LHR4_CUCSA (Ubiquitin-fold modifier-conjugating enzyme 1 OS=Cucumis sativus GN=Csa_3G893420 PE=3 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 3.2e-99
Identity = 169/174 (97.13%), Postives = 172/174 (98.85%), Query Frame = 1


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60

Query: 61  ANPEGTRWTGKCWYVHNLLKYEFDLQFDIPITYPSTAPELELPELDGKTQKMYRGGKICL 120
           ANPEGTRW GKCWY+HNLLKYEFDLQFDIP+TYPSTAPELELPELDGKTQKMYRGGKICL
Sbjct: 61  ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL 120

Query: 121 TIHFKPLWAKNSPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNTTSTSES 175
           TIHFKPLWAKN PRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKD+TTSTSES
Sbjct: 121 TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDDTTSTSES 174

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BLAST of CmoCh01G015110 vs. TrEMBL
Match: A0A067LAJ5_JATCU (Ubiquitin-fold modifier-conjugating enzyme 1 OS=Jatropha curcas GN=JCGZ_15942 PE=3 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 6.0e-98
Identity = 166/174 (95.40%), Postives = 170/174 (97.70%), Query Frame = 1


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60

Query: 61  ANPEGTRWTGKCWYVHNLLKYEFDLQFDIPITYPSTAPELELPELDGKTQKMYRGGKICL 120
           ANPEGTRWTGKCWYVHNLLKYEFDLQFDIP+TYPSTAPE+ELPELDGKTQKMYRGGKICL
Sbjct: 61  ANPEGTRWTGKCWYVHNLLKYEFDLQFDIPVTYPSTAPEIELPELDGKTQKMYRGGKICL 120

Query: 121 TIHFKPLWAKNSPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNTTSTSES 175
           T+HFKPLWAKN PRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKD+  S SES
Sbjct: 121 TVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDDAASASES 174

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BLAST of CmoCh01G015110 vs. TrEMBL
Match: A9PCY0_POPTR (Ubiquitin-fold modifier-conjugating enzyme 1 OS=Populus trichocarpa GN=POPTR_0002s10840g PE=2 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 7.8e-98
Identity = 165/174 (94.83%), Postives = 171/174 (98.28%), Query Frame = 1


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWT RLKEEYKALIAYTQMNKSNDNDWFRIS+
Sbjct: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTTRLKEEYKALIAYTQMNKSNDNDWFRISS 60

Query: 61  ANPEGTRWTGKCWYVHNLLKYEFDLQFDIPITYPSTAPELELPELDGKTQKMYRGGKICL 120
           ANPEGTRWTGKCWYVHNLLKYEFDLQFDIP+TYPSTAPELELP+LDGKTQKMYRGGKICL
Sbjct: 61  ANPEGTRWTGKCWYVHNLLKYEFDLQFDIPVTYPSTAPELELPQLDGKTQKMYRGGKICL 120

Query: 121 TIHFKPLWAKNSPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNTTSTSES 175
           T+HFKPLWAKN PRFGIAHALCLGLAPWLAAEVP+LVDSGMIKHKD+ TSTSES
Sbjct: 121 TVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDDATSTSES 174

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BLAST of CmoCh01G015110 vs. TrEMBL
Match: C6T5A5_SOYBN (Ubiquitin-fold modifier-conjugating enzyme 1 OS=Glycine max GN=GLYMA_06G091400 PE=2 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 1.7e-97
Identity = 164/172 (95.35%), Postives = 170/172 (98.84%), Query Frame = 1


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60

Query: 61  ANPEGTRWTGKCWYVHNLLKYEFDLQFDIPITYPSTAPELELPELDGKTQKMYRGGKICL 120
           ANPEGTRWTGKCWYVHNLLKYEFDLQFD+P+TYPSTAPELELP+LDGKTQKMYRGGKICL
Sbjct: 61  ANPEGTRWTGKCWYVHNLLKYEFDLQFDVPVTYPSTAPELELPQLDGKTQKMYRGGKICL 120

Query: 121 TIHFKPLWAKNSPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNTTSTS 173
           T+HFKPLWAKN PRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKD+T +TS
Sbjct: 121 TVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDDTATTS 172

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BLAST of CmoCh01G015110 vs. TrEMBL
Match: A0A0D2UV15_GOSRA (Ubiquitin-fold modifier-conjugating enzyme 1 OS=Gossypium raimondii GN=B456_009G278400 PE=3 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 3.9e-97
Identity = 163/174 (93.68%), Postives = 171/174 (98.28%), Query Frame = 1


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60

Query: 61  ANPEGTRWTGKCWYVHNLLKYEFDLQFDIPITYPSTAPELELPELDGKTQKMYRGGKICL 120
           ANPEGTRWTGKCWYVHNLLKYEFDLQFDIP+TYP+TAPELELPELDGKTQKMYRGGKICL
Sbjct: 61  ANPEGTRWTGKCWYVHNLLKYEFDLQFDIPVTYPATAPELELPELDGKTQKMYRGGKICL 120

Query: 121 TIHFKPLWAKNSPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNTTSTSES 175
           T+HFKPLWAKN PRFGIAHALCLGLAPWLAAE+PILVDSGMIKHKD+  +++ES
Sbjct: 121 TVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEIPILVDSGMIKHKDDAATSNES 174

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BLAST of CmoCh01G015110 vs. TAIR10
Match: AT1G27530.1 (AT1G27530.1 Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-fold modifier-conjugating enzyme 1 (InterPro:IPR014806))

HSP 1 Score: 355.5 bits (911), Expect = 1.8e-98
Identity = 159/174 (91.38%), Postives = 170/174 (97.70%), Query Frame = 1


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWDPNTKSTLT+IPLLTTKAGPRDGAAWTQRLKEEYK+LIAYTQMNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTRIPLLTTKAGPRDGAAWTQRLKEEYKSLIAYTQMNKSNDNDWFRISA 60

Query: 61  ANPEGTRWTGKCWYVHNLLKYEFDLQFDIPITYPSTAPELELPELDGKTQKMYRGGKICL 120
           +NPEGTRWTGKCWYVHNLLKYEFDLQFDIPITYP+TAPELELPE+DGKTQKMYRGGKICL
Sbjct: 61  SNPEGTRWTGKCWYVHNLLKYEFDLQFDIPITYPATAPELELPEIDGKTQKMYRGGKICL 120

Query: 121 TIHFKPLWAKNSPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNTTSTSES 175
           T+HFKPLWAKN PRFGIAHALCLGLAPWLAAE+PILVDSG IKHKD+  +++ES
Sbjct: 121 TVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEIPILVDSGAIKHKDDAATSAES 174

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BLAST of CmoCh01G015110 vs. NCBI nr
Match: gi|449436920|ref|XP_004136240.1| (PREDICTED: ubiquitin-fold modifier-conjugating enzyme 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 369.0 bits (946), Expect = 4.5e-99
Identity = 169/174 (97.13%), Postives = 172/174 (98.85%), Query Frame = 1


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60

Query: 61  ANPEGTRWTGKCWYVHNLLKYEFDLQFDIPITYPSTAPELELPELDGKTQKMYRGGKICL 120
           ANPEGTRW GKCWY+HNLLKYEFDLQFDIP+TYPSTAPELELPELDGKTQKMYRGGKICL
Sbjct: 61  ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL 120

Query: 121 TIHFKPLWAKNSPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNTTSTSES 175
           TIHFKPLWAKN PRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKD+TTSTSES
Sbjct: 121 TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDDTTSTSES 174

[Close]

BLAST of CmoCh01G015110 vs. NCBI nr
Match: gi|743802639|ref|XP_011016957.1| (PREDICTED: ubiquitin-fold modifier-conjugating enzyme 1 [Populus euphratica])

HSP 1 Score: 365.5 bits (937), Expect = 5.0e-98
Identity = 166/174 (95.40%), Postives = 171/174 (98.28%), Query Frame = 1


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWT RLKEEYKALIAYTQMNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTTRLKEEYKALIAYTQMNKSNDNDWFRISA 60

Query: 61  ANPEGTRWTGKCWYVHNLLKYEFDLQFDIPITYPSTAPELELPELDGKTQKMYRGGKICL 120
           ANPEGTRWTGKCWYVHNLLKYEFDLQFDIP+TYPSTAPELELP+LDGKTQKMYRGGKICL
Sbjct: 61  ANPEGTRWTGKCWYVHNLLKYEFDLQFDIPVTYPSTAPELELPQLDGKTQKMYRGGKICL 120

Query: 121 TIHFKPLWAKNSPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNTTSTSES 175
           T+HFKPLWAKN PRFGIAHALCLGLAPWLAAEVP+LVDSGMIKHKD+ TSTSES
Sbjct: 121 TVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDDATSTSES 174

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BLAST of CmoCh01G015110 vs. NCBI nr
Match: gi|802570293|ref|XP_012068099.1| (PREDICTED: ubiquitin-fold modifier-conjugating enzyme 1 [Jatropha curcas])

HSP 1 Score: 364.8 bits (935), Expect = 8.6e-98
Identity = 166/174 (95.40%), Postives = 170/174 (97.70%), Query Frame = 1


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60

Query: 61  ANPEGTRWTGKCWYVHNLLKYEFDLQFDIPITYPSTAPELELPELDGKTQKMYRGGKICL 120
           ANPEGTRWTGKCWYVHNLLKYEFDLQFDIP+TYPSTAPE+ELPELDGKTQKMYRGGKICL
Sbjct: 61  ANPEGTRWTGKCWYVHNLLKYEFDLQFDIPVTYPSTAPEIELPELDGKTQKMYRGGKICL 120

Query: 121 TIHFKPLWAKNSPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNTTSTSES 175
           T+HFKPLWAKN PRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKD+  S SES
Sbjct: 121 TVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDDAASASES 174

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BLAST of CmoCh01G015110 vs. NCBI nr
Match: gi|224063339|ref|XP_002301104.1| (hypothetical protein POPTR_0002s10840g [Populus trichocarpa])

HSP 1 Score: 364.4 bits (934), Expect = 1.1e-97
Identity = 165/174 (94.83%), Postives = 171/174 (98.28%), Query Frame = 1


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWT RLKEEYKALIAYTQMNKSNDNDWFRIS+
Sbjct: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTTRLKEEYKALIAYTQMNKSNDNDWFRISS 60

Query: 61  ANPEGTRWTGKCWYVHNLLKYEFDLQFDIPITYPSTAPELELPELDGKTQKMYRGGKICL 120
           ANPEGTRWTGKCWYVHNLLKYEFDLQFDIP+TYPSTAPELELP+LDGKTQKMYRGGKICL
Sbjct: 61  ANPEGTRWTGKCWYVHNLLKYEFDLQFDIPVTYPSTAPELELPQLDGKTQKMYRGGKICL 120

Query: 121 TIHFKPLWAKNSPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNTTSTSES 175
           T+HFKPLWAKN PRFGIAHALCLGLAPWLAAEVP+LVDSGMIKHKD+ TSTSES
Sbjct: 121 TVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDDATSTSES 174

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BLAST of CmoCh01G015110 vs. NCBI nr
Match: gi|351724683|ref|NP_001236810.1| (uncharacterized protein LOC100527748 [Glycine max])

HSP 1 Score: 363.2 bits (931), Expect = 2.5e-97
Identity = 164/172 (95.35%), Postives = 170/172 (98.84%), Query Frame = 1


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60

Query: 61  ANPEGTRWTGKCWYVHNLLKYEFDLQFDIPITYPSTAPELELPELDGKTQKMYRGGKICL 120
           ANPEGTRWTGKCWYVHNLLKYEFDLQFD+P+TYPSTAPELELP+LDGKTQKMYRGGKICL
Sbjct: 61  ANPEGTRWTGKCWYVHNLLKYEFDLQFDVPVTYPSTAPELELPQLDGKTQKMYRGGKICL 120

Query: 121 TIHFKPLWAKNSPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNTTSTS 173
           T+HFKPLWAKN PRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKD+T +TS
Sbjct: 121 TVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDDTATTS 172

The following BLAST results are available for this feature:

BLAST of CmoCh01G015110 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UFC1_ARATH	3.2e-97	91.38	Ubiquitin-fold modifier-conjugating enzyme 1 OS=Arabidopsis thaliana GN=At1g2753...	[more]
UFC1_ORYSJ	3.2e-84	78.74	Ubiquitin-fold modifier-conjugating enzyme 1 OS=Oryza sativa subsp. japonica GN=...	[more]
UFC1_ORYSI	3.2e-84	78.74	Ubiquitin-fold modifier-conjugating enzyme 1 OS=Oryza sativa subsp. indica GN=Os...	[more]
UFC1_DICDI	3.1e-71	72.39	Ubiquitin-fold modifier-conjugating enzyme 1 OS=Dictyostelium discoideum GN=ufc1...	[more]
UFC1_NEMVE	4.4e-70	70.06	Ubiquitin-fold modifier-conjugating enzyme 1 OS=Nematostella vectensis GN=v1g214...	[more]

BLAST of CmoCh01G015110 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHR4_CUCSA	3.2e-99	97.13	Ubiquitin-fold modifier-conjugating enzyme 1 OS=Cucumis sativus GN=Csa_3G893420 ...	[more]
A0A067LAJ5_JATCU	6.0e-98	95.40	Ubiquitin-fold modifier-conjugating enzyme 1 OS=Jatropha curcas GN=JCGZ_15942 PE...	[more]
A9PCY0_POPTR	7.8e-98	94.83	Ubiquitin-fold modifier-conjugating enzyme 1 OS=Populus trichocarpa GN=POPTR_000...	[more]
C6T5A5_SOYBN	1.7e-97	95.35	Ubiquitin-fold modifier-conjugating enzyme 1 OS=Glycine max GN=GLYMA_06G091400 P...	[more]
A0A0D2UV15_GOSRA	3.9e-97	93.68	Ubiquitin-fold modifier-conjugating enzyme 1 OS=Gossypium raimondii GN=B456_009G...	[more]

BLAST of CmoCh01G015110 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G27530.1	1.8e-98	91.38	Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquiti...	[more]

BLAST of CmoCh01G015110 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449436920\|ref\|XP_004136240.1\|	4.5e-99	97.13	PREDICTED: ubiquitin-fold modifier-conjugating enzyme 1 isoform X1 [Cucumis sati...	[more]
gi\|743802639\|ref\|XP_011016957.1\|	5.0e-98	95.40	PREDICTED: ubiquitin-fold modifier-conjugating enzyme 1 [Populus euphratica]	[more]
gi\|802570293\|ref\|XP_012068099.1\|	8.6e-98	95.40	PREDICTED: ubiquitin-fold modifier-conjugating enzyme 1 [Jatropha curcas]	[more]
gi\|224063339\|ref\|XP_002301104.1\|	1.1e-97	94.83	hypothetical protein POPTR_0002s10840g [Populus trichocarpa]	[more]
gi\|351724683\|ref\|NP_001236810.1\|	2.5e-97	95.35	uncharacterized protein LOC100527748 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR014806	Ufc1
IPR016135	UBQ-conjugating_enzyme/RWD

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0009407	toxin catabolic process
biological_process	GO:1990592	protein K69-linked ufmylation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0071568	UFM1 transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G015110.1	CmoCh01G015110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014806	Ubiquitin-fold modifier-conjugating enzyme 1	PIR	PIRSF008716	Ufc1	coord: 3..168 score: 1.2
IPR014806	Ubiquitin-fold modifier-conjugating enzyme 1	PANTHER	PTHR12921	FAMILY NOT NAMED	coord: 4..171 score: 1.8E
IPR014806	Ubiquitin-fold modifier-conjugating enzyme 1	PFAM	PF08694	UFC1	coord: 8..163 score: 1.5
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	G3DSA:3.10.110.10		coord: 30..124 score: 2.
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	unknown	SSF54495	UBC-like	coord: 5..164 score: 3.02
None	No IPR available	PANTHER	PTHR12921:SF0	UBIQUITIN-FOLD MODIFIER-CONJUGATING ENZYME 1	coord: 4..171 score: 1.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G015110	Cucsa.312220	Cucumber (Gy14) v1	cgycmoB0863
CmoCh01G015110	CmaCh09G006080	Cucurbita maxima (Rimu)	cmacmoB049
CmoCh01G015110	CmaCh01G014590	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G015110	Cla023085	Watermelon (97103) v1	cmowmB456
CmoCh01G015110	Csa3G893420	Cucumber (Chinese Long) v2	cmocuB441
CmoCh01G015110	MELO3C003490	Melon (DHL92) v3.5.1	cmomeB407
CmoCh01G015110	ClCG11G014860	Watermelon (Charleston Gray)	cmowcgB391
CmoCh01G015110	CSPI03G45820	Wild cucumber (PI 183967)	cmocpiB445
CmoCh01G015110	Lsi04G023040	Bottle gourd (USVL1VR-Ls)	cmolsiB420
CmoCh01G015110	Cp4.1LG02g03730	Cucurbita pepo (Zucchini)	cmocpeB448
CmoCh01G015110	Cp4.1LG06g03910	Cucurbita pepo (Zucchini)	cmocpeB466
CmoCh01G015110	MELO3C003490.2	Melon (DHL92) v3.6.1	cmomedB466
CmoCh01G015110	CsaV3_3G048290	Cucumber (Chinese Long) v3	cmocucB0531
CmoCh01G015110	Cla97C11G220860	Watermelon (97103) v2	cmowmbB437
CmoCh01G015110	Bhi09G002144	Wax gourd	cmowgoB0615
CmoCh01G015110	CsGy3G043300	Cucumber (Gy14) v2	cgybcmoB338
CmoCh01G015110	Carg00408	Silver-seed gourd	carcmoB0922

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh01G015110	CmoCh09G005960	Cucurbita moschata (Rifu)	cmocmoB019

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G015110	Wild cucumber (PI 183967)	cmocpiB461
CmoCh01G015110	Silver-seed gourd	carcmoB0873