CmoCh01G014360 (gene) Cucurbita moschata (Rifu)

NameCmoCh01G014360
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr01 : 11226365 .. 11228391 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGTACATGGCCTACTACTTCATGTTTTCACACCGCCAGCGTGCTATTGGCGGATCGGGAGATGCACTCCGGCATACTACATACCGACACTTACAAATCCTGGTAGGCATGTATTTAAGAATCCCTCCTTTCATGATGTACATATATAAGCCAATGAGATCACCTGGTGTATGTAAATTATTAGGCTAGCAGAAGGAAACCATGGAAAAGGATTAGAAACACTGAGAAACTAGAAAAAAAAAAATGAAGAGAAGCTAGAAGTTAGAGGTGAGATTTTTGGAATTGGAAGTTGAATTATAATTTAGAATTACAGAGGGATCTTTGAAGGGCTAAAGAGAACCTGGATTATAGAGGTCTGTGATATTGATGATGATGATGGTCATTGATGTGGGCTTGGAGAGCTGCGAAGATGGTGCAGATTTTGAAAATTTTGGCTTTGCTTTGCTTAGAGAGCTAGCATTAGCACCCTCCTCATTTAGATGAATAGGAACAAGAATGTTGTATAGAAATTCATTTATTGGTGCATTTGTTGCTATTTGCATTAGCTCCTACAGTCTCTAGATGGAAGAACTAACCCAATTTTTTATCAGAGCTTCGTTTTTTCCTTTCGGCGAAAGAGTAGAGATTTGAACATTTAACCAAAATTTTAAATTTTTAATCGACTTCCTCCTTATAATTGAACTCGTTCTTACCAAAAGCTAAATTAAAATAGAACTGAGTCTTAATTTCCTATTTTTGGTATTGAAAATTATGTTTCTTACATGGCTTTTGAGTTTTTTTTGTCCTTCAAGGCCAAACTTCATGTGAAGCAATTATCCTGAAATTTCACATATGCTGCAAACTGGGATTCTTAGGGAAAGCTAAGCCTTCAGGATTTAAATTTGTTGAAAAATCAATGAAACTGTGAACGATTTCTTCAAGGGAACAATGAAACTAAATTCTCAACGTCCTTCATGAACAAGAGAATTTTGGTCTGAAGTATAATTTTATTGCTAAACAATAAAGTGAAGGCAGAAATGTTCCTGGGTTTTGAAAGAAGGCTGAAGAAATCAGCCAAGGGCAGGGCAGGGCAGGGCAGGTTACTAAGGTGACACAAACGTGTAAGCACAATCTCAAGAATGGGAATGGGATTCAGCAACAGAGGGTTCGGGTGCAGAGTTTTGGGCTTCTTCTAATAGCTTCATTTGACGCTCAGCATGTTCTCTCTCACAGGCACTAATTCCCATTATGATATCAAGCATTGTACCAGTTGTGCCAAAAAACACAAGGGGTGCCAGAGACTTCCTCTTTATTCCCACTGGAATTGCTAGCAACGCTCCTGCTACTGAGAATACCCAAGTTCCCAACGCACTGTGTGAATGTTCAATGACAAGTAAGAATCAACCCAAAATCAACGCTTAAAAGGCTATTGAGGTTTATAATTTGAGGCTGGGGACTCTAACTCGCCCTTTTTTGGACCATGAGAGGCTTAAAGTCTCCATACCTCGTAAAATCATATTAATTTGCATCGTTCTCTAAAGTATAAAGGGTCGAGTTGTAACAATTCAAATATAGCTACTTTTACTACTTAAGCTATAAAAACATTGAGGACTAGAATTTCTAGACTAAGTCGATCCTATTAGTGATAATAGTAGCGACGTTAAAGATATCATTTTAGATTAAAGTTGAGGCTTACGCTTTATAGTGCCTCAAGGCTTGCGTCTTGCCTCTTGCCTCTTCAAGAGGCGAAGCCTCGAGGGCGCCTATAATCATTGGTCAAATGAACAAAACACTATGCTCGAATGAGCGGAATGCAAGATTACAATGACAAAACAATCTAGTTTAGATTTCAAACTGTAAAACTTCATAAGATTCTTTCTGTCATCTTAGCCAAATAACCTTAGTAATAGCTAAAATAGATAACGAGAACAGCTAGGTTGTTTTACCGAAGTTTAAATCATGGCCATATAAACATTTTAAAGTTCCTTTTTTTTTCTTTTTTTTTTTTCCTTCATGAAGCAGATAATCCGGTTTTCAACAATTGA

mRNA sequence

ATGCAGTACATGGCCTACTACTTCATGTTTTCACACCGCCAGCGTGCTATTGGCGGATCGGGAGATGCACTCCGGCATACTACATACCGACACTTACAAATCCTGGCTGAAGAAATCAGCCAAGGGCAGGGCAGGGCAGGGCAGGTTACTAAGGTGACACAAACGTGTAAGCACAATCTCAAGAATGGGAATGGGATTCAGCAACAGAGGGTTCGGGTGCAGAGTTTTGGGCTTCTTCTAATAGCTTCATTTGACGCTCAGCATGCACTAATTCCCATTATGATATCAAGCATTGTACCAGTTGTGCCAAAAAACACAAGGGGTGCCAGAGACTTCCTCTTTATTCCCACTGGAATTGCTAGCAACGCTCCTGCTACTGAGAATACCCAAGTTCCCAACGCACTGTGTGAATGTTCAATGACAAATAATCCGGTTTTCAACAATTGA

Coding sequence (CDS)

ATGCAGTACATGGCCTACTACTTCATGTTTTCACACCGCCAGCGTGCTATTGGCGGATCGGGAGATGCACTCCGGCATACTACATACCGACACTTACAAATCCTGGCTGAAGAAATCAGCCAAGGGCAGGGCAGGGCAGGGCAGGTTACTAAGGTGACACAAACGTGTAAGCACAATCTCAAGAATGGGAATGGGATTCAGCAACAGAGGGTTCGGGTGCAGAGTTTTGGGCTTCTTCTAATAGCTTCATTTGACGCTCAGCATGCACTAATTCCCATTATGATATCAAGCATTGTACCAGTTGTGCCAAAAAACACAAGGGGTGCCAGAGACTTCCTCTTTATTCCCACTGGAATTGCTAGCAACGCTCCTGCTACTGAGAATACCCAAGTTCCCAACGCACTGTGTGAATGTTCAATGACAAATAATCCGGTTTTCAACAATTGA
BLAST of CmoCh01G014360 vs. TrEMBL
Match: A0A0A9D4B1_ARUDO (Uncharacterized protein OS=Arundo donax PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.2e-09
Identity = 33/48 (68.75%), Postives = 40/48 (83.33%), Query Frame = 1

Query: 88  HALIPIMISSIVPVVPKNTRGARDFLFIPTGIASNAPATENTQVPNAL 136
           H L+P+M+SS+VPVVPK T GA+DF F+PTGIA+ APATE  QVP AL
Sbjct: 52  HWLMPMMMSSMVPVVPKKTSGAKDFFFMPTGIATRAPATEKNQVPRAL 99

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A9D4B1_ARUDO1.2e-0968.75Uncharacterized protein OS=Arundo donax PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G014360.1CmoCh01G014360.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh01G014360CmaCh09G008080Cucurbita maxima (Rimu)cmacmoB053
CmoCh01G014360Cp4.1LG02g03200Cucurbita pepo (Zucchini)cmocpeB448
CmoCh01G014360Carg00333Silver-seed gourdcarcmoB0922
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh01G014360CmoCh09G008010Cucurbita moschata (Rifu)cmocmoB025