CmoCh01G014270 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G014270
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	hydroxyproline-rich glycoprotein family protein
Location	Cmo_Chr01 : 11172447 .. 11173783 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGTTGATGAATTTTACCGGCAACCGGCTGCCGTTCCTTTCAAATGGGAGATCAAACCCGGCGTCCCCAGGAACCACCACCGCCTCCACCAGTTCCCCACTCACTCTCCTCAACAACACAAGAAGCTAAAGCCTCCTCCTGCTGTAACTGCAACCCAATTCCACCGTTCTTCCAACTCCCTCCGAACCCGGTCCGACCGATGGTCTTCCACCCAGTCCAAACTTGCCGAACCCGAGCAGGTCTCGGTCGGTTGCTTCTCCTCGCCTTTGCCGAACCGGAAAGCGAGCAAGATTGTTAACAGGAAACCCGAACCGGATTACGCCTCTGAGTTGGAGACTTTGCCGCGGTGGTCGGTTTCCAGTAAGAAGTCGATTTCGCCGTTCAGAAACTCGGTTTCGTCGTCGTCGCTTTCGTCGTACCAGTCATCGCCCCGTCCGACTAGTGATTCTGAGTGGGCCGGATTTGGGCTCTTTTGATTGGACCATATAAGACCGTGGGCTTATGAAACGTTGGGCTGAATTTATAGAGGCCAGGCCCATTTTTCGCCCCGTCTTGGTGGTCCTTTTGAGTGGGCTTTAGAGTTATTGGGCTTAGGTACCTCGAAAGCCCTTTTAAGAGTAGAAATAAGAAGCGTTAAATCCCGATTGTATTGTGCTTTGGAATCATAGGGATTTTCTTAAAAAACCCATAAATATGAAATATAAACCTTAAATATTAAGACCTTTGTTTCCTCGTGCTATTTTATTTTTCTGATCTTTTTTCCTATCCAAACATTTTAATGCTTGATAAAATTAGAAGTTCATAATTTTTAGGGACAATTTTTTTTTTATTTATTTATATTGAGGATGAGAGGAACCAAAATTTCAAAGGAAGGCTTAATAATAATGAATATGGAAATATATATATATATTTTTTATTGATAAATTAATAAGCTGAATAAATTTTCATCTTTTTTTTTAAATCTTTATAAAAAAAAATACAATGTTAACATTAATATAAATGGTTGTGCCTTGGCTAACCGTTTGAAACACTGAAAAAAAAATCATTAGCTTATCAAATTATCTATTGAGTCATGAAGAAAATTCAACAAAAGACAGAATCAACTTTAAGAATCCTTATATTGAAGGAAGGAAGCTACGTAAAATGTGAAGTAACTCCTAATATGGCAGTAAAGACAAGACGTGTCAACATATCAAGGATCTACAGACTGAAGGAAATAAGTTACGAAAAATGTGAAGTAACTCCTAATATAGGAGTAAAGACAAGGCGTGTCAATATATCGAGGATCCTCAGACAGATTGAAGGAAGTAAGTTACGAAAAAATGTGAAGTAA

mRNA sequence

ATGGACGTTGATGAATTTTACCGGCAACCGGCTGCCGTTCCTTTCAAATGGGAGATCAAACCCGGCGTCCCCAGGAACCACCACCGCCTCCACCAGTTCCCCACTCACTCTCCTCAACAACACAAGAAGCTAAAGCCTCCTCCTGCTGTAACTGCAACCCAATTCCACCGTTCTTCCAACTCCCTCCGAACCCGGTCCGACCGATGGTCTTCCACCCAGTCCAAACTTGCCGAACCCGAGCAGGTCTCGGTCGGTTGCTTCTCCTCGCCTTTGCCGAACCGGAAAGCGAGCAAGATTGTTAACAGGAAACCCGAACCGGATTACGCCTCTGAGTTGGAGACTTTGCCGCGGTGGTCGGTTTCCAGTAAGAAGTCGATTTCGCCGTTCAGAAACTCGGTTTCGTCGTCGTCGCTTTCGTCGTACCAGTCATCGCCCCTAAAGACAAGACGTGTCAACATATCAAGGATCTACAGACTGAAGGAAATAAGTTACGAAAAATGTGAAGTAACTCCTAATATAGGAGTAAAGACAAGGCGTGTCAATATATCGAGGATCCTCAGACAGATTGAAGGAAGTAAGTTACGAAAAAATGTGAAGTAA

Coding sequence (CDS)

ATGGACGTTGATGAATTTTACCGGCAACCGGCTGCCGTTCCTTTCAAATGGGAGATCAAACCCGGCGTCCCCAGGAACCACCACCGCCTCCACCAGTTCCCCACTCACTCTCCTCAACAACACAAGAAGCTAAAGCCTCCTCCTGCTGTAACTGCAACCCAATTCCACCGTTCTTCCAACTCCCTCCGAACCCGGTCCGACCGATGGTCTTCCACCCAGTCCAAACTTGCCGAACCCGAGCAGGTCTCGGTCGGTTGCTTCTCCTCGCCTTTGCCGAACCGGAAAGCGAGCAAGATTGTTAACAGGAAACCCGAACCGGATTACGCCTCTGAGTTGGAGACTTTGCCGCGGTGGTCGGTTTCCAGTAAGAAGTCGATTTCGCCGTTCAGAAACTCGGTTTCGTCGTCGTCGCTTTCGTCGTACCAGTCATCGCCCCTAAAGACAAGACGTGTCAACATATCAAGGATCTACAGACTGAAGGAAATAAGTTACGAAAAATGTGAAGTAACTCCTAATATAGGAGTAAAGACAAGGCGTGTCAATATATCGAGGATCCTCAGACAGATTGAAGGAAGTAAGTTACGAAAAAATGTGAAGTAA

Homology

[Close]

BLAST of CmoCh01G014270 vs. TrEMBL
Match: A0A0A0KY52_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G361790 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.9e-31
Identity = 82/125 (65.60%), Postives = 92/125 (73.60%), Query Frame = 1


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHQFPTHSPQQH--KKLKPPPAVTATQFHRS 60
           MD DEFYRQPAAVPFKWEIKPGVPRNHHRL   PTHSP QH  +KLKPPPAV  + F   
Sbjct: 1   MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQHHRQKLKPPPAV--SHFPHP 60

Query: 61  SNSL----RTRSDRWSSTQSKLAEPEQV-SVGCFSSPLPNRKASKIVNRK-PEPDYASEL 118
            NSL    RT+S+RW   +S     EQV S GCF SPLPNRK+ K V+RK PEPDY+S+L
Sbjct: 61  PNSLHSSPRTQSERWRFVRS-----EQVSSSGCFPSPLPNRKSPKSVSRKLPEPDYSSDL 118

[Close]

BLAST of CmoCh01G014270 vs. TrEMBL
Match: A0A067K9P8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12119 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.2e-24
Identity = 82/174 (47.13%), Postives = 101/174 (58.05%), Query Frame = 1


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHQ----------FPTHS--------PQQHK 60
           M VD+ +R+P +VPFKWEI+PGVP+  H+  +           P+ S        PQ  +
Sbjct: 1   MAVDDSFRKPGSVPFKWEIRPGVPKIQHQQQKQQPKKLSPPTLPSPSQPFTSRLTPQPQQ 60

Query: 61  KLKPPPA--------VTATQFHRSSNSLRTRSDRWSSTQSKLAEPEQVSVGCFSSPLPNR 120
           KLKPPP            T+  RSS   RTRS+RW   Q     PE VS GCF SPL  R
Sbjct: 61  KLKPPPGGFVFIPPPEPRTRSFRSSQ--RTRSERWRFEQPTRVRPECVSPGCFPSPLLKR 120

Query: 121 KASK---IVNRKPEPDYASELETLPRWSVSSKKSISPFRNSVSSSSLSSYQSSP 146
           K SK   +   + E DY S+LETL RWS+SS+KS SPFR+S S+SS SSYQSSP
Sbjct: 121 KDSKRRTVQLPESETDYTSDLETLARWSLSSRKSFSPFRDS-SASSFSSYQSSP 171

[Close]

BLAST of CmoCh01G014270 vs. TrEMBL
Match: B9H7I2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s20360g PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.5e-23
Identity = 76/178 (42.70%), Postives = 101/178 (56.74%), Query Frame = 1


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRL--------------------HQFPTHSPQ- 60
           +++D+ +++P AVPFKWEI+PGVP+   +                     H+ P+ +PQ 
Sbjct: 3   VEIDDSFKKPGAVPFKWEIRPGVPKIQRQQKQQKKELSPPTLPSPSPPFNHRRPSPTPQV 62

Query: 61  QHKKLKPPPAVTA------TQFHRSSNSLRTRSDRWSSTQSKLAEPEQVSVGCFSSPLPN 120
           Q +KLKPPPA +        + H   ++ R+RS RW   Q     PE VS GCF SPL  
Sbjct: 63  QKQKLKPPPARSVFLPPPEPRAHSFRSAPRSRSGRWRFEQPTHVRPECVSPGCFPSPLLR 122

Query: 121 RKASK------IVNRKPEPDYASELETLPRWSVSSKKSISPFRNSVSSSSLSSYQSSP 146
           RK SK      I     EPDY S+L+TL RWS+SS+KS S FR+S  +SS SSYQSSP
Sbjct: 123 RKDSKRRTSAGIAKPASEPDYTSDLDTLSRWSISSRKSFSSFRDS-PASSFSSYQSSP 179

[Close]

BLAST of CmoCh01G014270 vs. TrEMBL
Match: V4V643_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002610mg PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.0e-21
Identity = 76/174 (43.68%), Postives = 100/174 (57.47%), Query Frame = 1


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLH--------------QFPTH---SPQQHKK 60
           M +D+  R+P AVPFKWEI+PGVP+   +                +F  H   SP   +K
Sbjct: 1   MTIDDSCRKPGAVPFKWEIRPGVPKIQQQQPLKKLTPEPPLSPAVEFDNHTRSSPAPLQK 60

Query: 61  LKPPPAVT--------ATQFHRSSNSLRTRSDRWSSTQSKLAEPEQVSVGCFSSPLPNRK 120
           L+PPPA           +Q  RS+   RTRS+RW     K   P+ VS GCF +PL  +K
Sbjct: 61  LRPPPAALHFFPPVEPRSQSFRSTP--RTRSERWRF--EKPLRPDCVSPGCFPAPLLRQK 120

Query: 121 ASK----IVNRKPEPDYASELETLPRWSVSSKKSISPFRNSVSSSSLSSYQSSP 146
           ASK    +   + EP Y+S+LETL RWSVSS+K++SPF  S +SSS SSY+SSP
Sbjct: 121 ASKKRVLLPRPESEPGYSSDLETLARWSVSSRKTLSPFTASPASSSFSSYKSSP 170

[Close]

BLAST of CmoCh01G014270 vs. TrEMBL
Match: W9R9L6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013383 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.0e-21
Identity = 76/161 (47.20%), Postives = 99/161 (61.49%), Query Frame = 1


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHQFPTHSPQQH-----KKLKPPPA----VT 60
           M VD+ +++P +VPFKWEIKPGVP+   +  Q     P Q      +KL+PPPA    V 
Sbjct: 1   MGVDDSFKKPGSVPFKWEIKPGVPKVQSQQQQTKQQPPLQEPPSPLRKLRPPPAGLVFVP 60

Query: 61  ATQFHRS---SNSLRTRSDRWSSTQSKLAEPEQVSVGCF-SSPLPNRKASKIVNRKPEPD 120
                RS    +S RTRS+RW     +   PE V+ GCF ++PL  RK ++     PE D
Sbjct: 61  PPPEARSLSFRSSSRTRSERW-----RFERPEIVTGGCFPANPLLRRKGNRKRETTPESD 120

Query: 121 YASELETLPRWSVSSKKS-ISPFRNSVS--SSSLSSYQSSP 146
           YA+ELETL RWSVSS+K+ +S FR+S S  SSS SS+QSSP
Sbjct: 121 YAAELETLARWSVSSRKTLLSSFRDSTSSPSSSFSSHQSSP 156

[Close]

BLAST of CmoCh01G014270 vs. TAIR10
Match: AT1G77400.1 (AT1G77400.1 Protein of unknown function DUF688 (InterPro:IPR007789))

HSP 1 Score: 48.5 bits (114), Expect = 5.5e-06
Identity = 57/216 (26.39%), Postives = 82/216 (37.96%), Query Frame = 1


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPR--------------------------NHHRLHQFP 60
           +DVD+ +++P  +PF WEI+PGVP+                          +H +    P
Sbjct: 4   IDVDDSFKRPGTIPFSWEIRPGVPKTRMSQPGNTTPLQPPKKLSPLRFKPLSHSQPLLPP 63

Query: 61  THSPQQHK-----------------------KLKPPPAVTATQ-FHRSSNSLRTR----S 120
             SP                           KLKPP   ++   F+    S R+     S
Sbjct: 64  ALSPPSSSFISNSKSRPLSPLTPHSFSTTPSKLKPPRTPSSLSGFYSPGPSFRSSPRAFS 123

Query: 121 DRWSSTQSKLAEPEQ----------VSVGCFSSP-LPNRKAS------KIVNRKPEPDYA 146
           +RW   +     PE              GCF SP    RK        K  +R     Y 
Sbjct: 124 ERWQLHRPNRIRPESEPEPSSDFSVAGFGCFPSPKFRLRKVKSGGSRRKSGSRSENDYYC 183

[Close]

BLAST of CmoCh01G014270 vs. NCBI nr
Match: gi|659086946|ref|XP_008444194.1| (PREDICTED: putative protein TPRXL [Cucumis melo])

HSP 1 Score: 183.3 bits (464), Expect = 4.0e-43
Identity = 109/159 (68.55%), Postives = 120/159 (75.47%), Query Frame = 1


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHQFPTHSPQQH--KKLKPPPAVTATQFHRS 60
           MD DEFYR+PAAVPFKWEIKPGVPRNHHR  Q PTHSP QH  +KLKPPPAV  + F   
Sbjct: 1   MDTDEFYRKPAAVPFKWEIKPGVPRNHHRPRQSPTHSPPQHHRQKLKPPPAV--SHFPHP 60

Query: 61  SNSL----RTRSDRWSSTQSKLAEPEQV-SVGCFSSPLPNRKASKIVNRK-PEPDYASEL 120
           SNSL    RTRSDRW   +S     EQV S GCF SPLPNRK+ K ++RK PEPDY+S+L
Sbjct: 61  SNSLHSSPRTRSDRWRFVRS-----EQVSSSGCFPSPLPNRKSPKALSRKFPEPDYSSDL 120

Query: 121 ETLPRWSVSSKKSISPFRNSVSS---SSLSSYQSSPLKT 149
           +TL RWSVSS+KSISPFR SVSS   SS SSYQSSP  T
Sbjct: 121 DTLSRWSVSSRKSISPFRYSVSSSSPSSFSSYQSSPRPT 152

[Close]

BLAST of CmoCh01G014270 vs. NCBI nr
Match: gi|449449763|ref|XP_004142634.1| (PREDICTED: uncharacterized protein LOC101220757 [Cucumis sativus])

HSP 1 Score: 181.8 bits (460), Expect = 1.2e-42
Identity = 108/158 (68.35%), Postives = 119/158 (75.32%), Query Frame = 1


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHQFPTHSPQQH--KKLKPPPAVTATQFHRS 60
           MD DEFYRQPAAVPFKWEIKPGVPRNHHRL   PTHSP QH  +KLKPPPAV  + F   
Sbjct: 1   MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQHHRQKLKPPPAV--SHFPHP 60

Query: 61  SNSL----RTRSDRWSSTQSKLAEPEQV-SVGCFSSPLPNRKASKIVNRK-PEPDYASEL 120
            NSL    RT+S+RW   +S     EQV S GCF SPLPNRK+ K V+RK PEPDY+S+L
Sbjct: 61  PNSLHSSPRTQSERWRFVRS-----EQVSSSGCFPSPLPNRKSPKSVSRKLPEPDYSSDL 120

Query: 121 ETLPRWSVSSKKSISPFRNSVSS--SSLSSYQSSPLKT 149
           +TL RWSVSS+KSISPFR SVSS  SS SSYQSSP  T
Sbjct: 121 DTLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPT 151

[Close]

BLAST of CmoCh01G014270 vs. NCBI nr
Match: gi|700199387|gb|KGN54545.1| (hypothetical protein Csa_4G361790 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 2.7e-31
Identity = 82/125 (65.60%), Postives = 92/125 (73.60%), Query Frame = 1


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHQFPTHSPQQH--KKLKPPPAVTATQFHRS 60
           MD DEFYRQPAAVPFKWEIKPGVPRNHHRL   PTHSP QH  +KLKPPPAV  + F   
Sbjct: 1   MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQHHRQKLKPPPAV--SHFPHP 60

Query: 61  SNSL----RTRSDRWSSTQSKLAEPEQV-SVGCFSSPLPNRKASKIVNRK-PEPDYASEL 118
            NSL    RT+S+RW   +S     EQV S GCF SPLPNRK+ K V+RK PEPDY+S+L
Sbjct: 61  PNSLHSSPRTQSERWRFVRS-----EQVSSSGCFPSPLPNRKSPKSVSRKLPEPDYSSDL 118

[Close]

BLAST of CmoCh01G014270 vs. NCBI nr
Match: gi|802636559|ref|XP_012078275.1| (PREDICTED: uncharacterized protein LOC105638965 [Jatropha curcas])

HSP 1 Score: 120.6 bits (301), Expect = 3.2e-24
Identity = 82/174 (47.13%), Postives = 101/174 (58.05%), Query Frame = 1


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHQ----------FPTHS--------PQQHK 60
           M VD+ +R+P +VPFKWEI+PGVP+  H+  +           P+ S        PQ  +
Sbjct: 1   MAVDDSFRKPGSVPFKWEIRPGVPKIQHQQQKQQPKKLSPPTLPSPSQPFTSRLTPQPQQ 60

Query: 61  KLKPPPA--------VTATQFHRSSNSLRTRSDRWSSTQSKLAEPEQVSVGCFSSPLPNR 120
           KLKPPP            T+  RSS   RTRS+RW   Q     PE VS GCF SPL  R
Sbjct: 61  KLKPPPGGFVFIPPPEPRTRSFRSSQ--RTRSERWRFEQPTRVRPECVSPGCFPSPLLKR 120

Query: 121 KASK---IVNRKPEPDYASELETLPRWSVSSKKSISPFRNSVSSSSLSSYQSSP 146
           K SK   +   + E DY S+LETL RWS+SS+KS SPFR+S S+SS SSYQSSP
Sbjct: 121 KDSKRRTVQLPESETDYTSDLETLARWSLSSRKSFSPFRDS-SASSFSSYQSSP 171

[Close]

BLAST of CmoCh01G014270 vs. NCBI nr
Match: gi|224084958|ref|XP_002307455.1| (hypothetical protein POPTR_0005s20360g [Populus trichocarpa])

HSP 1 Score: 115.9 bits (289), Expect = 7.9e-23
Identity = 76/178 (42.70%), Postives = 101/178 (56.74%), Query Frame = 1


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRL--------------------HQFPTHSPQ- 60
           +++D+ +++P AVPFKWEI+PGVP+   +                     H+ P+ +PQ 
Sbjct: 3   VEIDDSFKKPGAVPFKWEIRPGVPKIQRQQKQQKKELSPPTLPSPSPPFNHRRPSPTPQV 62

Query: 61  QHKKLKPPPAVTA------TQFHRSSNSLRTRSDRWSSTQSKLAEPEQVSVGCFSSPLPN 120
           Q +KLKPPPA +        + H   ++ R+RS RW   Q     PE VS GCF SPL  
Sbjct: 63  QKQKLKPPPARSVFLPPPEPRAHSFRSAPRSRSGRWRFEQPTHVRPECVSPGCFPSPLLR 122

Query: 121 RKASK------IVNRKPEPDYASELETLPRWSVSSKKSISPFRNSVSSSSLSSYQSSP 146
           RK SK      I     EPDY S+L+TL RWS+SS+KS S FR+S  +SS SSYQSSP
Sbjct: 123 RKDSKRRTSAGIAKPASEPDYTSDLDTLSRWSISSRKSFSSFRDS-PASSFSSYQSSP 179

The following BLAST results are available for this feature:

BLAST of CmoCh01G014270 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh01G014270 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY52_CUCSA	1.9e-31	65.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G361790 PE=4 SV=1	[more]
A0A067K9P8_JATCU	2.2e-24	47.13	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12119 PE=4 SV=1	[more]
B9H7I2_POPTR	5.5e-23	42.70	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s20360g PE=4 SV=1	[more]
V4V643_9ROSI	3.0e-21	43.68	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002610mg PE=4 SV=1	[more]
W9R9L6_9ROSA	3.0e-21	47.20	Uncharacterized protein OS=Morus notabilis GN=L484_013383 PE=4 SV=1	[more]

BLAST of CmoCh01G014270 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G77400.1	5.5e-06	26.39	Protein of unknown function DUF688 (InterPro:IPR007789)	[more]

BLAST of CmoCh01G014270 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659086946\|ref\|XP_008444194.1\|	4.0e-43	68.55	PREDICTED: putative protein TPRXL [Cucumis melo]	[more]
gi\|449449763\|ref\|XP_004142634.1\|	1.2e-42	68.35	PREDICTED: uncharacterized protein LOC101220757 [Cucumis sativus]	[more]
gi\|700199387\|gb\|KGN54545.1\|	2.7e-31	65.60	hypothetical protein Csa_4G361790 [Cucumis sativus]	[more]
gi\|802636559\|ref\|XP_012078275.1\|	3.2e-24	47.13	PREDICTED: uncharacterized protein LOC105638965 [Jatropha curcas]	[more]
gi\|224084958\|ref\|XP_002307455.1\|	7.9e-23	42.70	hypothetical protein POPTR_0005s20360g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G014270.1	CmoCh01G014270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35466	FAMILY NOT NAMED	coord: 1..147 score: 4.1
None	No IPR available	PANTHER	PTHR35466:SF2	SUBFAMILY NOT NAMED	coord: 1..147 score: 4.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G014270	CmaCh01G013750	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G014270	Csa4G361790	Cucumber (Chinese Long) v2	cmocuB454
CmoCh01G014270	MELO3C010504	Melon (DHL92) v3.5.1	cmomeB423
CmoCh01G014270	ClCG11G015900	Watermelon (Charleston Gray)	cmowcgB391
CmoCh01G014270	CSPI04G17640	Wild cucumber (PI 183967)	cmocpiB458
CmoCh01G014270	Lsi04G024100	Bottle gourd (USVL1VR-Ls)	cmolsiB420
CmoCh01G014270	Cp4.1LG02g03040	Cucurbita pepo (Zucchini)	cmocpeB448
CmoCh01G014270	MELO3C010504.2	Melon (DHL92) v3.6.1	cmomedB487
CmoCh01G014270	CsaV3_4G028070	Cucumber (Chinese Long) v3	cmocucB0542
CmoCh01G014270	Bhi09G002265	Wax gourd	cmowgoB0615
CmoCh01G014270	CsGy4G016790	Cucumber (Gy14) v2	cgybcmoB476
CmoCh01G014270	Carg00323	Silver-seed gourd	carcmoB0922

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G014270	Cucumber (Chinese Long) v2	cmocuB469
CmoCh01G014270	Watermelon (97103) v1	cmowmB456
CmoCh01G014270	Cucurbita pepo (Zucchini)	cmocpeB438
CmoCh01G014270	Cucurbita pepo (Zucchini)	cmocpeB427
CmoCh01G014270	Cucurbita pepo (Zucchini)	cmocpeB461
CmoCh01G014270	Silver-seed gourd	carcmoB1119
CmoCh01G014270	Silver-seed gourd	carcmoB1400
CmoCh01G014270	Cucumber (Chinese Long) v3	cmocucB0558
CmoCh01G014270	Watermelon (97103) v2	cmowmbB437
CmoCh01G014270	Cucurbita moschata (Rifu)	cmocmoB013
CmoCh01G014270	Cucurbita moschata (Rifu)	cmocmoB245
CmoCh01G014270	Cucurbita moschata (Rifu)	cmocmoB366
CmoCh01G014270	Cucumber (Gy14) v1	cgycmoB0328
CmoCh01G014270	Cucurbita maxima (Rimu)	cmacmoB041
CmoCh01G014270	Cucurbita maxima (Rimu)	cmacmoB294
CmoCh01G014270	Cucurbita maxima (Rimu)	cmacmoB717