CmoCh01G013590 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G013590
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	GTP-dependent nucleic acid-binding protein engD isoform 4
Location	Cmo_Chr01 : 10716866 .. 10725326 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCTGCAAAAATATGTACAGTTGGTGGTAGAGTAAAATTAGAGTGTCGTCTTCATGAATTGAGCTTTCTTGCTGTGTGAGTGAAGGGTTTTTAAGCGTTGAAATTGAAAATGAAATTGGATCGGAGAGAGAACCAAAAGAATTGGGGAACCCTAAAAAGAGATAACGATTAGCGGGCGATTTTAATAGGACAATTGAAAAAGATGGGTCCTCTTCCTTCTATCTCGTTTTCTCTTTTTCCTTTTTTTTTTTTTTCTTTTCCTTTTAAATTTGTTTATTCTCTTCTTCATTTTCTCAAATCTTAATATAACTGAAATTCTTCCTCCTGTAAATTCCTTTTTTTAACCCTTTTGTTATTCTATTTATATTTAATTAACTGTAATTTCTAATAGTTTTGTTCTTTTTCTTAATTTATGATATAATTACTAATTTATTATAACTATTGGATTTATAATTAAAAATAAATAAATTCGTTTTTTTAGAATATATAGCTAAATTTCAAAAATAAAATTAGATTTTTAAATTTTTTTAGTTACTAACGGTTTTTTTTTTAATACATGTAAAAAATAATGAAATTTACATAATTCATTTCAAATCTCGTATCATTGACTTTTAGTTTTATGGTAGGATAGGTTGATAGGAGTCCAATAAATTTTTGTCATAATACTAATAAGCGTAGTTATATTTAGGCTAATGTTATATGTTTTATGTATGATAATTTTTTTATTATTTTTATTTCACGTGTGTTAACAATATGGTATTATTCTTTAAGAAATAAAAAAAAGTGTGAAATTATCTTGTTTAATGTTATTTGCTTCATAAAAATAAATAATTCCCGTGGAATACCCAAAAATAATATTGTGAAAATAATAATAATTTGATATAATTGTGTAGGTTTCTTTATTACAACAGAGTAAAACTATAAATAGTTACTTAATAAGTTATTCTTTGGAATGAATTATATGTGTTTGATAATAATTTTATTTTTATTGTTTACCTTTTGTTTCTAGTGAAAGAAAAAAACCAATTTATTTATTTTCATTTATTTTTTAAAATTAGATAGACACGTGTAAAAACATAATAATAATAATAAATTAAATACAGGTAAATATTTTAGAACAGGATTTTATTTTATGAAATATAAAAAAAAAGTCAACCAGACATGAAAACAAAATTATTATTATTTTTTTTTTAAGGGGAGGGTATATATATATATAGAAACATTTTTTTTTTGAAAGCTTAAATTTAAAAATTCGGATTACAGAAGTATAAATCAGTACCTTCTCTGCTAAGATGTGGGATGGAGACGAACCAAAATAGAAACTAGAGGATATGTGATGTCCGAATAAAGAACAATGTAAATTAATTAATATCACATTTGAATGAGAGCGATTATAAATATAAAATAATTATAAAAAAAATTAAAATATTTATTCAATTATAACTTTAAATGGAAGTAAAAATAATAAAATAAAATAATTATTTAGATTTTATAATTTTTTAAAGATTTTATTAAATCAAATAAACTGAAATATTGATAATAATAATTATTATTATTATTATTATAAAAAAAAAACAAGCTTAGACTAATCTTGTTAAATTCCCTCCGTATACACTTTTTGATAATTTTGTTCATCCCATCCGATCTGTTTGGCTTTGGTCCGAGCTCTGCAACAGGTGGCCACAGCCATGGCCAGAATAGCTTGCGCTCACATTATTCCGTCTCTGCTTTCCCCTTCGAAATCCTTCAGTTAACTCGCACTCTCTCCTCAGGAGCTTCTCATTTCAGCCATGTTACGGTGGTTGGCCGTCGTTTCTCTGATACATCTAAGTTCAGTACGAGCCTCAGAGCCGGCATCGTTGGCCTCATCAATGTTGGAAAATCAACGCTCTTCAATGTCGTCGTAAGCTAATATCGGTTGCTCTCTCTCTTTATTTCATACTAAATTTACTGTAATTTGGATTTCGAGCTATGGAACTGATGGTTACTTTCGGAAAACTCCGTAGCTACTGAAGAATTCGTTGTTGAATTGTCGTTATAGCTAGTGGATTGTGGAATTGTGCACCAGGATTTGTGAACTATTGGATTATAATGTAGGTAGTTTATAAACGCTACGGACTCACAGCTCTCTTCGAATTTTTCATGGTCTGATTATCGTATTTTTCATGTTAGGTTTTCTACATATCTTGTGCATCTTAAGGCTACGCCTCGAGATTTTGACACGATAGCTCCACATATTCACTCCGAGCGATGAATGTGTTTCAATAATTTGTTTAAACTGATTTTTTTCGGATCATCATCGCTTTTACTAATTTTGATACAAGCTACATCATAGTATATTTAATATGATGATAATCATGCTGTTTCTGGCTAACAATGCAGTGTCATGTGTCCGATTGTGAAAGCTCACTTAACTTCTAACTTCTTTCCACAGATTTAATTTTGTGAATTGGACGGCTTCCTCTTTTAGTTCATACTTCCACTTGGAAATCTACATCAATTTCATATGACGCGTATTGTCTATGATGGAAACCTTTGCAGGTTGAAAATGGCAAGGCTCAAGCAGCTAAATTTCCTTTCTGTACAATAGAGCCCAACGTAGGAGTAGTTGCAGTTCCAGATCCTCGTCTGCATCAACTTTCTGATCTCAGCAAGTCTATACGAGCGGTCCCAGCATCCATAGAGTTTGTAGATACTGCTGGGTTAATGAATGGTGCCAGTCAAGGAGAAGTATGGTTCATTGACATCTCTGTTGAGGATTGTTGGGAGTGAGTCCCATCATGGCTAATTTAGAGAATGATCATGAGTTTATAGGTAAAGGAATACATCTCCATTGGCATGAGGCCTTTTAGGGAAGCCTAAAGCAAAACCATGAGAGCTTATGCTCAAAGTGGACAATATCATATCATTGTGGAGAGTCGTGATTCTTAACACACCTCAGCGTTCTTTGACTAAGATTCCAAATGATTTTTGACTAAGATTCCAAATGATTTTTGAATAAAGATGAAATTCATTGTACAGAAATGACAAGAAAACAAACACAATTTTCAAAAACAAAAAATTAAAAATTAAATGGTTGTGGAAATACACATTTTGAAAATTCATTTGTATGTATGTTTTCATTGATGTTATTTTCTAGAATTCTGTAATAGACTTCCCCTTTATTTTGACCACTGCAGGGATTGGGAATATAACTTCTTATCCCATGTTCGTGAGGTGGAGGTCCATACTTCAGGTGATTTTCTATTTTATCATATTTCTTTTGTCATAATACTTAGAAACCTACTTACATAATTGTATTTCTAAAGAGTAATACCGGTTTAACAGATGAATTGGCTAGTATATTTCTCTGCAATATCAACTGCCCGGTGATTCAACAAGAGAAAGAATGGACTTTAATTTGTTGAATTCTTTGTTTTTTTGTCTTACAGAATTGTGTAAGTTTTTGTTCCTATTTATCTACTTAACTTTTCTGTTATATATTTTTGTCCTATAATACGCATGCATGCCAAATAGGCAAAACAATGCCCTGGAAGCTCTAAGAATAACGTGGGCACTTCTTGCTTTTTTCATTACTTAATTTTGTGCTGTTAAATATTTTAATATTATTGTTCCAGACTGTGCGCTGTTTTGAGGATAACGACATTGTTCACGTGAATGGGAAAATTGATCCAAAAACTGGTATTGATTTGATTAACTTAGAGCTTTATTTTTCAGATCTGGACCAGGTAACATCACTGAAACCTTTTCTATATTCATACGCATGTTTTGCACCTTTTAGTATGCAGGGTTACAATCCTTTGTTATTATCTTGCTACTTTTTATTTAATTGTACATTTGCCTTTTGTACTGCCGTTAACTGAATCCCTATATATTAGAGATATTAGGTAACAATAAATCTAAATAAATTCTTATCTAAAGCGAGCACTGGCTTTGTTTGCCTCTCTCGTGTTCACCCTTTTGGAGTACTTCCATGAGCATTACTGGCCTCTCTCATACTCACTCCACTTGGAGCACTTCTATTGGTATTGTTTGCCTCTCTAGTGCTCACTTCTTAAGGAAAATTGATTGATTAATGTTTGTGAAGAACTCCATCGCTTGCAATGGTGACTTCTTGAAGCAATTTTTTGAACTTCTAATCGTTCCTCACAGCTAGAAGAACATGCCTAGGGTTTATCCTAGTTTTCTAGCCAATTCCAAAATCTGAGTGCCAAGGTATTCGAGGATGACAGCTAGGTAGATCGAAGCATATACGACAATCCCCTTTTCGTAGTGACCTTTCTTAAGGTACTGTATGATTCTTCCATCCGGGCATTAGAGTCTAGCCTTACAAAGTTGGAGATTTTAGTTTAGTCGCCTCCTTTATTGAATACTTCAAATATGAATCTCAAAATTTGATGTTTTGTGATGATGATGGAAAGAATGACTTGAGATTTTTTTTGACATGATGGAATAAACAAGAGGATAGTATCTTGGTCATGATCGGTTGCTAGGAAGGCTCCAAATAAATTTAGTCAAATTGGAAGGCTATGCTAATTAATTACACCTCTGAAAATAGAAGGAAATAAGGAAATGAATCCTATTTCCTAGTTGAAGTATGGTATGTTAGATTCTGGGCCTTTCTTGCTTGTTTGGTCTTCCTTAAAAATTTTGGATTCTCAAGAATTGATGGAGCAAGTGAGACTACAATAATGATTCTTAAAGAAGAGAAGATGTCAATGGTTTCAAACCCACTGGGCTCTTGCTTCTATTACGCAATGGGCCAAATTATTGCTGTTGTTGAATGGGTTTTTATCTGATGTTGCAAATGTTATGACGTTGCAATGGAAGTCGCAAGTGGGCCTGGCGCAAGAGTCCCCCCAATGGACTTTTGATGCTGCAGAGGAACTTAATACTCTGACGCAAATAGAAATCGATTTATATATATCATATTCCTCTCAAAGTATGATTAAATTTGTTGGTAAAAATCTGATTTAAAATTAAAAACGTTTCAGTCAAAGAAGGATGTAGCCCACTGGATCTGGCTGTGTTGACTTTGTTTTTCCAACAATTCTTACATCAGAGAGGAATAGGATTAAAGCTCATGAAATGCAATGTTACAAACAGAGTGATCGATAATTCTGTCCTGCCTATGAATGGCCAAATTTTTAAAGATGGATATACTTACATGAAGTAAAGATTTATGGATGAAATATACGAAAGTTTTCATTGATGTTAATGAGAATCTGACACCAAAGAGAAGAAAACGTCATTAGCTGTTCTCTCCTTTTGTTCTTTGTTTCAACGAAGTTCTTGATGTTTCTTACAAAAAGAATAAATAATAATCCTAGTCCATACATTATCATCATGCCTTCATTGTTTTTTTTTTTTTTTTTGTTAATTATTGGGTTTTGTTCATTGGGACGTTTTCTTGTGATTAGACTTGGTTGTTCTTCTTCTCGTTCGTTGCCCTTTGGTGGCTTGAGGCCCTACACTTTTTTGTGTCTGTTCCTATACTCTGTTTTCTTAACAAAGGTGGTTTGGAGAACATATTCTCTTGGTTAAAAGAATGTCATTCAGAGATTTGGGGATCAACCTGCCTCGTTCTTTTGTCTTTTAGAACGAAACTTGGCCTACCAAGGCCAGTGCAACAAGAAAAGTGCTCTAATAGAAGAATTTCTATTCGTCCATAAGAACTTAAAAAGTTTAGCGAAGAAACGGACTGGTATAGTGCTGTATGATTGACATCCAGAATTACTCAAATCCTTAATTTGAAATTTGAAGATTACTTCATTCATCCTGACAGACATTTAACTGTGAACTGTTTACTGGACTGATGACATATTATACCTGTCTTGAAGTTTCTTTGGACTCTTGTTACTGATCATTCCAGCCAGAGCAATACTAAATTACCTAACAGATTGTACATCGGATTCAAGATCTAAATCAAGAGGTGAATATTTAGCTGGACAGAAACAGGTATGTGCATATTCTCATAGCATTATCTTTCGAAAGAATAATTTTGAATTTTTTTCTTCTATATGTTGTTTTATTGTTGATGTCAAAAGTTTTATTATTACTTTTAACTGTTTTAAAACTTTCTCATGAACCCCTTCAACCGTTCAAAAATAGCATTAATACCCTTAATTTTTTTAAAATAAGTTTTTATCGTGAGTATATAAATGAAAATCATTTCTCTATAATTTGTAGGTGTAGATAAATGGTTTTCATCCATATACTACAACATTTGGTAAACAAAAAGATTAAAAATGTTAATGCTATTTTTTTATATTTTAAAAATATAATTAGTATTTTTGAATTTTTTAAAAATATTTAAGTGTATTATTAAAACTTCTGAATTTGTATTTTAAAATTTTTTAAAGGTATTATTCAAGTTATGTCGGGTAATCGAGGAATGTTGCATGTGGAAAGAGAATTTGTTTAATTATTTTAGAGTTAATTATTGCTTTTTATGGCATTATTTAGGCACGAGTAGTTTAGTACTTTGATGGGATGTTTGCTAGGAACAGAAGGATGATAAAGTGTTACAATATATTAAATAGTCTGTGTATATAATATTATTATCTACGCATCAAATGCATAGAAATAATAAAGAGCCTGCTCATTAAAATCTGCATTTTGCCCATGCTTGCTTGGGCAGTAGAGACATGATCATAAACTCATAGATTTTATGTTCCCTTCCTTGTAATTAGAGATTCAGTTTTAATTATTTTTAGGATAATGAGCTTCAGAAAAATCAAATTATATATAACCTTACACATAAAATTAAAAAAAAATGGACTAAATTTCATCAATCATAGGAAAGTTTGATAATTTTAAAAAAATCTAATGTAACTCAACTCTGAATTGTTTAGTTTTAGTTGGATTACAACATCGTTTAGTTTTACTTGGCTTAAATAGTGTGAATTTGTTTGGACTAATCCAAACCTAAATAAAATTAATAAAATAAGAAACTATGAATTTTAGGTTGGGAATTAATTTAACTTAGACTAATTTTAAGAGCTAGCATGCATGAATCAATCCATAATATGTCTTGCAATGAAAGAGTTGCAAGAGTATAAATGTTTTTATTTTTGTTTGATTCTATAATCAAACATTATTGGCAATTTGATTCATCATCCAAATCTAGACTATGTTAGTTGAATAACTTCAAATCTCTAGGATTTTAATTTATGCTTCATTGAAGAGTATTTATTTTCTTCAATAGCTCTTAGCTTCAAATCTCTATCAAAAGTGAACCCTTAAAGAGTGGTTGGAAAGAAAAAGAATTGTAGTGTGGTCGATTCAAGGCTAGTTTTTGATACTCTAAAATTAGGATTAGAGCCTCTAGTTAGGACTTGGACGATTTCATCCTAAAATACAACTTGCTAATCCTATAAGTTTACACTATCTATGCTTCTAAAAATCCGTCTTCAAACCATCTCGTTCAAATTCACTCAATCAAACGAATATAGTAAATTTCAACTTGGTGGATGAAAACATCTAGACTATATTTGAATTCTATGTTTCAAAATGTACAACTTTAAGACACAACGTTAACATATTCAAATATGTTTCAACCGAAGTAAAAACATGGAATACAACTCTATTTTTTCAGCCTCTACAAGTTACAAATCTATAGATCAAACCCTAAGTAAAACTCTCGAAACTCGTTCCTCGAGAAGGAGCTGAAAAAGGGTTTTAAAATTTGTGATCCAAATGGAGAGGTTTGAATGAAAAGTTGTGGAGTAGGGAGTGGGGAGTGAGCAGTTCATGTACTGAATTCTGTTTGTGCGAGCAAAATGAATGCTTGTGGTTAAGGTAAGCTGGGCCATGTGCCCATTTCTTCATTCTATCTTTTTTATGTAATATATACATTGCATCACATTTCTTCTAAATATCTGCACGTGCATTCCCTTTGTCTTTCCACCCGACACGACAGCCTTCTCAGTCAAATGGCCATTTCTGTGGGGCACTGTCCCTCGTGCCATTGCCCATTCCAATCTTTTCTTCTTGCTTTACTGCCCTCTTAGTCTTTTCATTCGAACACTTTTCTCGTTATTTTCTTCAATTCGGTGCAATTTATAATATTCTCTCTTTTCATTTTCAAAATCTACAGGTGGCGTTGATCGTAAGGGTTTGAGATGTTTCGAGAAATTCTTTTTGAAATTTTTTTAGTAAAATTATTGAGCGAAAAAAACTTAATAATTTATAACTTTTGTGGTCTTTCACAGGTTTGGCATTTAGGTTGGTCGAGTCTCTCTAGAGAGTAGTGAAGATGGAGGTCGTGGGCATCAGGTGAGGCACAAACTCCTTCCAATATGCTAGTTATAGATATATCATTCAAAGTCGATATTTTAAAAGTTATGAACGATAAAAATAGGTTTGAACTCTATTGACGAAGTTCCTCCTAACATAACCAGGTAACAAGAAGGAAACAATCCAGTATAAATATTAGAATCTTCATAGCTATTTGA

mRNA sequence

ATGGAAGCTGCAAAAATATGTACAGTTGGTGGTAGAGTAAAATTAGAGTGTCGTCTTCATGAATTGAGCTTTCTTGCTGTCTCTGCAACAGGTGGCCACAGCCATGGCCAGAATAGCTTGCGCTCACATTATTCCGTCTCTGCTTTCCCCTTCGAAATCCTTCAGTTAACTCGCACTCTCTCCTCAGGAGCTTCTCATTTCAGCCATGTTACGGTGGTTGGCCGTCGTTTCTCTGATACATCTAAGTTCAGTACGAGCCTCAGAGCCGGCATCGTTGGCCTCATCAATGTTGGAAAATCAACGCTCTTCAATGTCGTCGTTGAAAATGGCAAGGCTCAAGCAGCTAAATTTCCTTTCTGTACAATAGAGCCCAACGTAGGAGTAGTTGCAGTTCCAGATCCTCGTCTGCATCAACTTTCTGATCTCAGCAAGTCTATACGAGCGGTCCCAGCATCCATAGAGTTTGTAGATACTGCTGGGTTAATGAATGGTGCCAGTCAAGGAGAAGTATGGTTCATTGACATCTCTGTTGAGGATTGTTGGGAGGATTGGGAATATAACTTCTTATCCCATGTTCGTGAGGTGGAGGTCCATACTTCAGATGAATTGGCTAGTATATTTCTCTGCAATATCAACTGCCCGACTGTGCGCTGTTTTGAGGATAACGACATTGTTCACGTGAATGGGAAAATTGATCCAAAAACTGGTATTGATTTGATTAACTTAGAGCTTTATTTTTCAGATCTGGACCAGGTTGGTCGAGTCTCTCTAGAGAGTAGTGAAGATGGAGGTCGTGGGCATCAGGTAACAAGAAGGAAACAATCCAGTATAAATATTAGAATCTTCATAGCTATTTGA

Coding sequence (CDS)

ATGGAAGCTGCAAAAATATGTACAGTTGGTGGTAGAGTAAAATTAGAGTGTCGTCTTCATGAATTGAGCTTTCTTGCTGTCTCTGCAACAGGTGGCCACAGCCATGGCCAGAATAGCTTGCGCTCACATTATTCCGTCTCTGCTTTCCCCTTCGAAATCCTTCAGTTAACTCGCACTCTCTCCTCAGGAGCTTCTCATTTCAGCCATGTTACGGTGGTTGGCCGTCGTTTCTCTGATACATCTAAGTTCAGTACGAGCCTCAGAGCCGGCATCGTTGGCCTCATCAATGTTGGAAAATCAACGCTCTTCAATGTCGTCGTTGAAAATGGCAAGGCTCAAGCAGCTAAATTTCCTTTCTGTACAATAGAGCCCAACGTAGGAGTAGTTGCAGTTCCAGATCCTCGTCTGCATCAACTTTCTGATCTCAGCAAGTCTATACGAGCGGTCCCAGCATCCATAGAGTTTGTAGATACTGCTGGGTTAATGAATGGTGCCAGTCAAGGAGAAGTATGGTTCATTGACATCTCTGTTGAGGATTGTTGGGAGGATTGGGAATATAACTTCTTATCCCATGTTCGTGAGGTGGAGGTCCATACTTCAGATGAATTGGCTAGTATATTTCTCTGCAATATCAACTGCCCGACTGTGCGCTGTTTTGAGGATAACGACATTGTTCACGTGAATGGGAAAATTGATCCAAAAACTGGTATTGATTTGATTAACTTAGAGCTTTATTTTTCAGATCTGGACCAGGTTGGTCGAGTCTCTCTAGAGAGTAGTGAAGATGGAGGTCGTGGGCATCAGGTAACAAGAAGGAAACAATCCAGTATAAATATTAGAATCTTCATAGCTATTTGA

Homology

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BLAST of CmoCh01G013590 vs. Swiss-Prot
Match: YCHF_HAEIN (Ribosome-binding ATPase YchF OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ychF PE=1 SV=2)

HSP 1 Score: 136.3 bits (342), Expect = 5.1e-31
Identity = 82/179 (45.81%), Postives = 106/179 (59.22%), Query Frame = 1


Query: 88  RAGIVGLINVGKSTLFNVVVENGKAQAAKFPFCTIEPNVGVVAVPDPRLHQLSDLSKSIR 147
           + GIVGL NVGKSTLFN + + G  +AA +PFCTIEPN GVV +PDPRL  L+++ K  R
Sbjct: 4   KCGIVGLPNVGKSTLFNALTKAG-IEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPER 63

Query: 148 AVPASIEFVDTAGLMNGASQGEVWFIDISVEDCWEDWEYNFLSHVREVEVHTSDELASIF 207
            +P ++EFVD AGL+ GAS+GE                  FL+++RE     +D +  + 
Sbjct: 64  ILPTTMEFVDIAGLVAGASKGE-------------GLGNKFLANIRE-----TDAIGHV- 123

Query: 208 LCNINCPTVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLDQVGRV--SLESSEDGG 265
                   VRCFE++DIVHV GKIDP   ID IN EL  +DLD   R    L+    GG
Sbjct: 124 --------VRCFENDDIVHVAGKIDPLDDIDTINTELALADLDSCERAIQRLQKRAKGG 154

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BLAST of CmoCh01G013590 vs. Swiss-Prot
Match: YCHF_ECOLI (Ribosome-binding ATPase YchF OS=Escherichia coli (strain K12) GN=ychF PE=1 SV=2)

HSP 1 Score: 136.0 bits (341), Expect = 6.6e-31
Identity = 76/167 (45.51%), Postives = 102/167 (61.08%), Query Frame = 1


Query: 88  RAGIVGLINVGKSTLFNVVVENGKAQAAKFPFCTIEPNVGVVAVPDPRLHQLSDLSKSIR 147
           + GIVGL NVGKSTLFN + + G  +AA FPFCTIEPN GVV +PDPRL QL+++ K  R
Sbjct: 4   KCGIVGLPNVGKSTLFNALTKAG-IEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQR 63

Query: 148 AVPASIEFVDTAGLMNGASQGEVWFIDISVEDCWEDWEYNFLSHVREVEVHTSDELASIF 207
            +P ++EFVD AGL+ GAS+G             E     FL+++RE E           
Sbjct: 64  TLPTTMEFVDIAGLVKGASKG-------------EGLGNQFLTNIRETEAIGH------- 123

Query: 208 LCNINCPTVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLDQVGR 255
                   VRCFE+++I+HV+GK++P   I++IN EL  +DLD   R
Sbjct: 124 -------VVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCER 142

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BLAST of CmoCh01G013590 vs. Swiss-Prot
Match: YCHF_ECO57 (Ribosome-binding ATPase YchF OS=Escherichia coli O157:H7 GN=ychF PE=3 SV=2)

HSP 1 Score: 136.0 bits (341), Expect = 6.6e-31
Identity = 76/167 (45.51%), Postives = 102/167 (61.08%), Query Frame = 1


Query: 88  RAGIVGLINVGKSTLFNVVVENGKAQAAKFPFCTIEPNVGVVAVPDPRLHQLSDLSKSIR 147
           + GIVGL NVGKSTLFN + + G  +AA FPFCTIEPN GVV +PDPRL QL+++ K  R
Sbjct: 4   KCGIVGLPNVGKSTLFNALTKAG-IEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQR 63

Query: 148 AVPASIEFVDTAGLMNGASQGEVWFIDISVEDCWEDWEYNFLSHVREVEVHTSDELASIF 207
            +P ++EFVD AGL+ GAS+G             E     FL+++RE E           
Sbjct: 64  TLPTTMEFVDIAGLVKGASKG-------------EGLGNQFLTNIRETEAIGH------- 123

Query: 208 LCNINCPTVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLDQVGR 255
                   VRCFE+++I+HV+GK++P   I++IN EL  +DLD   R
Sbjct: 124 -------VVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCER 142

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BLAST of CmoCh01G013590 vs. Swiss-Prot
Match: YCHF_SHIFL (Ribosome-binding ATPase YchF OS=Shigella flexneri GN=ychF PE=3 SV=2)

HSP 1 Score: 136.0 bits (341), Expect = 6.6e-31
Identity = 76/167 (45.51%), Postives = 102/167 (61.08%), Query Frame = 1


Query: 88  RAGIVGLINVGKSTLFNVVVENGKAQAAKFPFCTIEPNVGVVAVPDPRLHQLSDLSKSIR 147
           + GIVGL NVGKSTLFN + + G  +AA FPFCTIEPN GVV +PDPRL QL+++ K  R
Sbjct: 4   KCGIVGLPNVGKSTLFNALTKAG-IEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQR 63

Query: 148 AVPASIEFVDTAGLMNGASQGEVWFIDISVEDCWEDWEYNFLSHVREVEVHTSDELASIF 207
            +P ++EFVD AGL+ GAS+G             E     FL+++RE E           
Sbjct: 64  TLPTTMEFVDIAGLVKGASKG-------------EGLGNQFLTNIRETEAIGH------- 123

Query: 208 LCNINCPTVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLDQVGR 255
                   VRCFE+++I+HV+GK++P   I++IN EL  +DLD   R
Sbjct: 124 -------VVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCER 142

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BLAST of CmoCh01G013590 vs. Swiss-Prot
Match: YCHF_BACSU (Ribosome-binding ATPase YchF OS=Bacillus subtilis (strain 168) GN=ychF PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 8.7e-31
Identity = 74/167 (44.31%), Postives = 101/167 (60.48%), Query Frame = 1


Query: 86  SLRAGIVGLINVGKSTLFNVVVENGKAQAAKFPFCTIEPNVGVVAVPDPRLHQLSDLSKS 145
           +L AGIVGL NVGKSTLFN + + G A++A +PFCTI+PNVG+V VPD RL +L++L   
Sbjct: 2   ALTAGIVGLPNVGKSTLFNAITQAG-AESANYPFCTIDPNVGIVEVPDDRLQKLTELVNP 61

Query: 146 IRAVPASIEFVDTAGLMNGASQGEVWFIDISVEDCWEDWEYNFLSHVREVEVHTSDELAS 205
            + VP + EF D AG++ GAS+G             E     FLSH+R+V+         
Sbjct: 62  KKTVPTAFEFTDIAGIVKGASKG-------------EGLGNKFLSHIRQVDA-------- 121

Query: 206 IFLCNINCPTVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLDQV 253
                  C  VR F D++I HV+GK+DP   I+ INLEL  +D++ V
Sbjct: 122 ------ICHVVRAFSDDNITHVSGKVDPIDDIETINLELILADMETV 140

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BLAST of CmoCh01G013590 vs. TrEMBL
Match: A0A0A0KZ18_CUCSA (Obg-like ATPase 1 OS=Cucumis sativus GN=Csa_4G606030 PE=3 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 5.2e-59
Identity = 132/196 (67.35%), Postives = 142/196 (72.45%), Query Frame = 1


Query: 57  TRTLSSGASHFSHVTVVGRRFSDTSKFSTSLRAGIVGLINVGKSTLFNVVVENGKAQAAK 116
           T +L S  S F HV V+GRRFS +SK S SLRAGIVGL NVGKSTLFN VVENGKAQAA 
Sbjct: 24  THSLFSRPSQFDHVMVLGRRFSSSSKISMSLRAGIVGLPNVGKSTLFNAVVENGKAQAAN 83

Query: 117 FPFCTIEPNVGVVAVPDPRLHQLSDLSKSIRAVPASIEFVDTAGLMNGASQGEVWFIDIS 176
           FPFCTIEPNVGVVAVPDPRLH+LSDLSKS RAV ASIEFVD AGL+ GASQG        
Sbjct: 84  FPFCTIEPNVGVVAVPDPRLHKLSDLSKSQRAVAASIEFVDIAGLVKGASQG-------- 143

Query: 177 VEDCWEDWEYNFLSHVREVEVHTSDELASIFLCNINCPTVRCFEDNDIVHVNGKIDPKTG 236
                E     FLSH+REV     D +  +         VRCFEDNDIVHVNGKIDPKT 
Sbjct: 144 -----EGLGNKFLSHIREV-----DSILQV---------VRCFEDNDIVHVNGKIDPKTD 192

Query: 237 IDLINLELYFSDLDQV 253
           ID+INLEL FSDLDQ+
Sbjct: 204 IDVINLELVFSDLDQI 192

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BLAST of CmoCh01G013590 vs. TrEMBL
Match: A0A059BV02_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03180 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.3e-53
Identity = 120/187 (64.17%), Postives = 134/187 (71.66%), Query Frame = 1


Query: 66  HFSHVTVVGRRFSDTSKFSTSLRAGIVGLINVGKSTLFNVVVENGKAQAAKFPFCTIEPN 125
           H + V    RRFS +S+ S SL+AGIVGL NVGKSTLFN VVENGKAQAA FPFCTIEPN
Sbjct: 34  HLAAVLGSRRRFSCSSRLSMSLKAGIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPN 93

Query: 126 VGVVAVPDPRLHQLSDLSKSIRAVPASIEFVDTAGLMNGASQGEVWFIDISVEDCWEDWE 185
           VG+VAVPDPRLH LSDLSKS RAVPASIEFVD AGL+ GASQG             E   
Sbjct: 94  VGIVAVPDPRLHVLSDLSKSQRAVPASIEFVDIAGLVKGASQG-------------EGLG 153

Query: 186 YNFLSHVREVEVHTSDELASIFLCNINCPTVRCFEDNDIVHVNGKIDPKTGIDLINLELY 245
             FLSH+REV     D +  +         VRCFEDNDIVHVNGK+DPK+ ID+INLEL 
Sbjct: 154 NKFLSHIREV-----DSILQV---------VRCFEDNDIVHVNGKVDPKSDIDVINLELI 193

Query: 246 FSDLDQV 253
           F+DLDQ+
Sbjct: 214 FTDLDQI 193

[Close]

BLAST of CmoCh01G013590 vs. TrEMBL
Match: A0A059BU83_EUCGR (Obg-like ATPase 1 OS=Eucalyptus grandis GN=EUGRSUZ_F03180 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.3e-53
Identity = 120/187 (64.17%), Postives = 134/187 (71.66%), Query Frame = 1


Query: 66  HFSHVTVVGRRFSDTSKFSTSLRAGIVGLINVGKSTLFNVVVENGKAQAAKFPFCTIEPN 125
           H + V    RRFS +S+ S SL+AGIVGL NVGKSTLFN VVENGKAQAA FPFCTIEPN
Sbjct: 34  HLAAVLGSRRRFSCSSRLSMSLKAGIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPN 93

Query: 126 VGVVAVPDPRLHQLSDLSKSIRAVPASIEFVDTAGLMNGASQGEVWFIDISVEDCWEDWE 185
           VG+VAVPDPRLH LSDLSKS RAVPASIEFVD AGL+ GASQG             E   
Sbjct: 94  VGIVAVPDPRLHVLSDLSKSQRAVPASIEFVDIAGLVKGASQG-------------EGLG 153

Query: 186 YNFLSHVREVEVHTSDELASIFLCNINCPTVRCFEDNDIVHVNGKIDPKTGIDLINLELY 245
             FLSH+REV     D +  +         VRCFEDNDIVHVNGK+DPK+ ID+INLEL 
Sbjct: 154 NKFLSHIREV-----DSILQV---------VRCFEDNDIVHVNGKVDPKSDIDVINLELI 193

Query: 246 FSDLDQV 253
           F+DLDQ+
Sbjct: 214 FTDLDQI 193

[Close]

BLAST of CmoCh01G013590 vs. TrEMBL
Match: A0A067DWU1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g012870mg PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 7.3e-53
Identity = 117/178 (65.73%), Postives = 129/178 (72.47%), Query Frame = 1


Query: 75  RRFSDTSKFSTSLRAGIVGLINVGKSTLFNVVVENGKAQAAKFPFCTIEPNVGVVAVPDP 134
           RRFS  SK S SLRAGIVGL NVGKSTLFN VVENGKAQAA FPFCTIEPNVG+VAVPDP
Sbjct: 45  RRFSSASKISMSLRAGIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPNVGIVAVPDP 104

Query: 135 RLHQLSDLSKSIRAVPASIEFVDTAGLMNGASQGEVWFIDISVEDCWEDWEYNFLSHVRE 194
           RLH LS LSKS +AVPAS+EFVD AGL+ GASQG             E     FLSH+RE
Sbjct: 105 RLHVLSGLSKSQKAVPASVEFVDIAGLVKGASQG-------------EGLGNKFLSHIRE 164

Query: 195 VEVHTSDELASIFLCNINCPTVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLDQV 253
           V     D +  +         VRCFEDNDIVHVNGK+DPK+ +D+INLEL FSDLDQ+
Sbjct: 165 V-----DSILQV---------VRCFEDNDIVHVNGKVDPKSDVDVINLELVFSDLDQI 195

[Close]

BLAST of CmoCh01G013590 vs. TrEMBL
Match: V4VN48_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020166mg PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 7.3e-53
Identity = 117/178 (65.73%), Postives = 129/178 (72.47%), Query Frame = 1


Query: 75  RRFSDTSKFSTSLRAGIVGLINVGKSTLFNVVVENGKAQAAKFPFCTIEPNVGVVAVPDP 134
           RRFS  SK S SLRAGIVGL NVGKSTLFN VVENGKAQAA FPFCTIEPNVG+VAVPDP
Sbjct: 45  RRFSSASKISMSLRAGIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPNVGIVAVPDP 104

Query: 135 RLHQLSDLSKSIRAVPASIEFVDTAGLMNGASQGEVWFIDISVEDCWEDWEYNFLSHVRE 194
           RLH LS LSKS +AVPAS+EFVD AGL+ GASQG             E     FLSH+RE
Sbjct: 105 RLHVLSGLSKSQKAVPASVEFVDIAGLVKGASQG-------------EGLGNKFLSHIRE 164

Query: 195 VEVHTSDELASIFLCNINCPTVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLDQV 253
           V     D +  +         VRCFEDNDIVHVNGK+DPK+ +D+INLEL FSDLDQ+
Sbjct: 165 V-----DSILQV---------VRCFEDNDIVHVNGKVDPKSDVDVINLELVFSDLDQI 195

[Close]

BLAST of CmoCh01G013590 vs. TAIR10
Match: AT1G56050.1 (AT1G56050.1 GTP-binding protein-related)

HSP 1 Score: 200.7 bits (509), Expect = 1.2e-51
Identity = 117/202 (57.92%), Postives = 135/202 (66.83%), Query Frame = 1


Query: 53  ILQLTRTLSSGASHFSHVTVVGRRFSDTSKFSTSLRAGIVGLINVGKSTLFNVVVENGKA 112
           +L   + L SG S F  V  + +R   +SK S SL+AGIVGL NVGKSTLFN VVENGKA
Sbjct: 21  LLCRNQLLFSGNSKFVGVLTLQKRCF-SSKVSMSLKAGIVGLPNVGKSTLFNAVVENGKA 80

Query: 113 QAAKFPFCTIEPNVGVVAVPDPRLHQLSDLSKSIRAVPASIEFVDTAGLMNGASQGEVWF 172
           QAA FPFCTIEPNVG+VAVPD RL  LS LS S + VPASIEFVD AGL+ GASQGE   
Sbjct: 81  QAANFPFCTIEPNVGIVAVPDSRLQVLSKLSGSQKTVPASIEFVDIAGLVKGASQGE--- 140

Query: 173 IDISVEDCWEDWEYNFLSHVREVEVHTSDELASIFLCNINCPTVRCFEDNDIVHVNGKID 232
                          FLSH+REV     D +  +         VRCFEDNDI+HVNGK+D
Sbjct: 141 ----------GLGNKFLSHIREV-----DSILQV---------VRCFEDNDIIHVNGKVD 194

Query: 233 PKTGIDLINLELYFSDLDQVGR 255
           PK+ ID+INLEL F DLDQ+G+
Sbjct: 201 PKSDIDVINLELIFCDLDQIGK 194

[Close]

BLAST of CmoCh01G013590 vs. TAIR10
Match: AT1G30580.1 (AT1G30580.1 GTP binding)

HSP 1 Score: 106.3 bits (264), Expect = 3.2e-23
Identity = 68/173 (39.31%), Postives = 90/173 (52.02%), Query Frame = 1


Query: 82  KFSTSLRAGIVGLINVGKSTLFNVVVENGKAQAAKFPFCTIEPNVGVVAVPDPRLHQLSD 141
           +FS+ L+ GIVGL NVGKSTLFN + +     A  FPFCTIEPN   V +PD R   L  
Sbjct: 20  RFSSHLKIGIVGLPNVGKSTLFNTLTKLS-IPAENFPFCTIEPNEARVNIPDERFDWLCQ 79

Query: 142 LSKSIRAVPASIEFVDTAGLMNGASQGEVWFIDISVEDCWEDWEYNFLSHVREVEVHTSD 201
             K    +PA +E  D AGL+ GA +G             +    NFLSH+R V+     
Sbjct: 80  TYKPKSEIPAFLEIHDIAGLVRGAHEG-------------QGLGNNFLSHIRAVD----- 139

Query: 202 ELASIFLCNINCPTVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLDQVGR 255
               IF        +R FED DI+HV+  +DP   ++ I  EL   D++ VG+
Sbjct: 140 ---GIF------HVLRAFEDADIIHVDDIVDPVRDLETITEELRLKDIEFVGK 164

[Close]

BLAST of CmoCh01G013590 vs. NCBI nr
Match: gi|659087140|ref|XP_008444290.1| (PREDICTED: obg-like ATPase 1 [Cucumis melo])

HSP 1 Score: 236.9 bits (603), Expect = 4.4e-59
Identity = 132/196 (67.35%), Postives = 142/196 (72.45%), Query Frame = 1


Query: 57  TRTLSSGASHFSHVTVVGRRFSDTSKFSTSLRAGIVGLINVGKSTLFNVVVENGKAQAAK 116
           T +L S  SHF HV V+GRRFS +SK S SLRAGIVGL NVGKSTLFN VVENGKAQAA 
Sbjct: 24  THSLFSRPSHFDHVMVLGRRFSSSSKISMSLRAGIVGLPNVGKSTLFNAVVENGKAQAAN 83

Query: 117 FPFCTIEPNVGVVAVPDPRLHQLSDLSKSIRAVPASIEFVDTAGLMNGASQGEVWFIDIS 176
           FPFCTIEPNVGVVAVPDPRLH+LSDLSKS RAV ASIEFVD AGL+ GASQG        
Sbjct: 84  FPFCTIEPNVGVVAVPDPRLHKLSDLSKSQRAVAASIEFVDIAGLVKGASQG-------- 143

Query: 177 VEDCWEDWEYNFLSHVREVEVHTSDELASIFLCNINCPTVRCFEDNDIVHVNGKIDPKTG 236
                E     FLSH+REV     D +  +         VRCFEDNDIVHVNGKIDPKT 
Sbjct: 144 -----EGLGNKFLSHIREV-----DSILQV---------VRCFEDNDIVHVNGKIDPKTD 192

Query: 237 IDLINLELYFSDLDQV 253
           ID+INLEL  SDLDQ+
Sbjct: 204 IDVINLELVLSDLDQI 192

[Close]

BLAST of CmoCh01G013590 vs. NCBI nr
Match: gi|449453790|ref|XP_004144639.1| (PREDICTED: obg-like ATPase 1 [Cucumis sativus])

HSP 1 Score: 236.1 bits (601), Expect = 7.5e-59
Identity = 132/196 (67.35%), Postives = 142/196 (72.45%), Query Frame = 1


Query: 57  TRTLSSGASHFSHVTVVGRRFSDTSKFSTSLRAGIVGLINVGKSTLFNVVVENGKAQAAK 116
           T +L S  S F HV V+GRRFS +SK S SLRAGIVGL NVGKSTLFN VVENGKAQAA 
Sbjct: 24  THSLFSRPSQFDHVMVLGRRFSSSSKISMSLRAGIVGLPNVGKSTLFNAVVENGKAQAAN 83

Query: 117 FPFCTIEPNVGVVAVPDPRLHQLSDLSKSIRAVPASIEFVDTAGLMNGASQGEVWFIDIS 176
           FPFCTIEPNVGVVAVPDPRLH+LSDLSKS RAV ASIEFVD AGL+ GASQG        
Sbjct: 84  FPFCTIEPNVGVVAVPDPRLHKLSDLSKSQRAVAASIEFVDIAGLVKGASQG-------- 143

Query: 177 VEDCWEDWEYNFLSHVREVEVHTSDELASIFLCNINCPTVRCFEDNDIVHVNGKIDPKTG 236
                E     FLSH+REV     D +  +         VRCFEDNDIVHVNGKIDPKT 
Sbjct: 144 -----EGLGNKFLSHIREV-----DSILQV---------VRCFEDNDIVHVNGKIDPKTD 192

Query: 237 IDLINLELYFSDLDQV 253
           ID+INLEL FSDLDQ+
Sbjct: 204 IDVINLELVFSDLDQI 192

[Close]

BLAST of CmoCh01G013590 vs. NCBI nr
Match: gi|629104360|gb|KCW69829.1| (hypothetical protein EUGRSUZ_F03180 [Eucalyptus grandis])

HSP 1 Score: 216.9 bits (551), Expect = 4.7e-53
Identity = 120/187 (64.17%), Postives = 134/187 (71.66%), Query Frame = 1


Query: 66  HFSHVTVVGRRFSDTSKFSTSLRAGIVGLINVGKSTLFNVVVENGKAQAAKFPFCTIEPN 125
           H + V    RRFS +S+ S SL+AGIVGL NVGKSTLFN VVENGKAQAA FPFCTIEPN
Sbjct: 34  HLAAVLGSRRRFSCSSRLSMSLKAGIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPN 93

Query: 126 VGVVAVPDPRLHQLSDLSKSIRAVPASIEFVDTAGLMNGASQGEVWFIDISVEDCWEDWE 185
           VG+VAVPDPRLH LSDLSKS RAVPASIEFVD AGL+ GASQG             E   
Sbjct: 94  VGIVAVPDPRLHVLSDLSKSQRAVPASIEFVDIAGLVKGASQG-------------EGLG 153

Query: 186 YNFLSHVREVEVHTSDELASIFLCNINCPTVRCFEDNDIVHVNGKIDPKTGIDLINLELY 245
             FLSH+REV     D +  +         VRCFEDNDIVHVNGK+DPK+ ID+INLEL 
Sbjct: 154 NKFLSHIREV-----DSILQV---------VRCFEDNDIVHVNGKVDPKSDIDVINLELI 193

Query: 246 FSDLDQV 253
           F+DLDQ+
Sbjct: 214 FTDLDQI 193

[Close]

BLAST of CmoCh01G013590 vs. NCBI nr
Match: gi|702376931|ref|XP_010062703.1| (PREDICTED: obg-like ATPase 1 [Eucalyptus grandis])

HSP 1 Score: 216.9 bits (551), Expect = 4.7e-53
Identity = 120/187 (64.17%), Postives = 134/187 (71.66%), Query Frame = 1


Query: 66  HFSHVTVVGRRFSDTSKFSTSLRAGIVGLINVGKSTLFNVVVENGKAQAAKFPFCTIEPN 125
           H + V    RRFS +S+ S SL+AGIVGL NVGKSTLFN VVENGKAQAA FPFCTIEPN
Sbjct: 34  HLAAVLGSRRRFSCSSRLSMSLKAGIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPN 93

Query: 126 VGVVAVPDPRLHQLSDLSKSIRAVPASIEFVDTAGLMNGASQGEVWFIDISVEDCWEDWE 185
           VG+VAVPDPRLH LSDLSKS RAVPASIEFVD AGL+ GASQG             E   
Sbjct: 94  VGIVAVPDPRLHVLSDLSKSQRAVPASIEFVDIAGLVKGASQG-------------EGLG 153

Query: 186 YNFLSHVREVEVHTSDELASIFLCNINCPTVRCFEDNDIVHVNGKIDPKTGIDLINLELY 245
             FLSH+REV     D +  +         VRCFEDNDIVHVNGK+DPK+ ID+INLEL 
Sbjct: 154 NKFLSHIREV-----DSILQV---------VRCFEDNDIVHVNGKVDPKSDIDVINLELI 193

Query: 246 FSDLDQV 253
           F+DLDQ+
Sbjct: 214 FTDLDQI 193

[Close]

BLAST of CmoCh01G013590 vs. NCBI nr
Match: gi|568848480|ref|XP_006478036.1| (PREDICTED: ribosome-binding ATPase YchF isoform X2 [Citrus sinensis])

HSP 1 Score: 215.7 bits (548), Expect = 1.1e-52
Identity = 117/178 (65.73%), Postives = 129/178 (72.47%), Query Frame = 1


Query: 75  RRFSDTSKFSTSLRAGIVGLINVGKSTLFNVVVENGKAQAAKFPFCTIEPNVGVVAVPDP 134
           RRFS  SK S SLRAGIVGL NVGKSTLFN VVENGKAQAA FPFCTIEPNVG+VAVPDP
Sbjct: 45  RRFSSASKISMSLRAGIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPNVGIVAVPDP 104

Query: 135 RLHQLSDLSKSIRAVPASIEFVDTAGLMNGASQGEVWFIDISVEDCWEDWEYNFLSHVRE 194
           RLH LS LSKS +AVPAS+EFVD AGL+ GASQG             E     FLSH+RE
Sbjct: 105 RLHVLSGLSKSQKAVPASVEFVDIAGLVKGASQG-------------EGLGNKFLSHIRE 164

Query: 195 VEVHTSDELASIFLCNINCPTVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLDQV 253
           V     D +  +         VRCFEDNDIVHVNGK+DPK+ +D+INLEL FSDLDQ+
Sbjct: 165 V-----DSILQV---------VRCFEDNDIVHVNGKVDPKSDVDVINLELVFSDLDQI 195

The following BLAST results are available for this feature:

BLAST of CmoCh01G013590 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YCHF_HAEIN	5.1e-31	45.81	Ribosome-binding ATPase YchF OS=Haemophilus influenzae (strain ATCC 51907 / DSM ...	[more]
YCHF_ECOLI	6.6e-31	45.51	Ribosome-binding ATPase YchF OS=Escherichia coli (strain K12) GN=ychF PE=1 SV=2	[more]
YCHF_ECO57	6.6e-31	45.51	Ribosome-binding ATPase YchF OS=Escherichia coli O157:H7 GN=ychF PE=3 SV=2	[more]
YCHF_SHIFL	6.6e-31	45.51	Ribosome-binding ATPase YchF OS=Shigella flexneri GN=ychF PE=3 SV=2	[more]
YCHF_BACSU	8.7e-31	44.31	Ribosome-binding ATPase YchF OS=Bacillus subtilis (strain 168) GN=ychF PE=3 SV=1	[more]

BLAST of CmoCh01G013590 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ18_CUCSA	5.2e-59	67.35	Obg-like ATPase 1 OS=Cucumis sativus GN=Csa_4G606030 PE=3 SV=1	[more]
A0A059BV02_EUCGR	3.3e-53	64.17	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03180 PE=4 SV=1	[more]
A0A059BU83_EUCGR	3.3e-53	64.17	Obg-like ATPase 1 OS=Eucalyptus grandis GN=EUGRSUZ_F03180 PE=3 SV=1	[more]
A0A067DWU1_CITSI	7.3e-53	65.73	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g012870mg PE=4 SV=1	[more]
V4VN48_9ROSI	7.3e-53	65.73	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020166mg PE=4 SV=1	[more]

BLAST of CmoCh01G013590 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G56050.1	1.2e-51	57.92	GTP-binding protein-related	[more]
AT1G30580.1	3.2e-23	39.31	GTP binding	[more]

BLAST of CmoCh01G013590 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659087140\|ref\|XP_008444290.1\|	4.4e-59	67.35	PREDICTED: obg-like ATPase 1 [Cucumis melo]	[more]
gi\|449453790\|ref\|XP_004144639.1\|	7.5e-59	67.35	PREDICTED: obg-like ATPase 1 [Cucumis sativus]	[more]
gi\|629104360\|gb\|KCW69829.1\|	4.7e-53	64.17	hypothetical protein EUGRSUZ_F03180 [Eucalyptus grandis]	[more]
gi\|702376931\|ref\|XP_010062703.1\|	4.7e-53	64.17	PREDICTED: obg-like ATPase 1 [Eucalyptus grandis]	[more]
gi\|568848480\|ref\|XP_006478036.1\|	1.1e-52	65.73	PREDICTED: ribosome-binding ATPase YchF isoform X2 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006073	GTP_binding_domain
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006783	heme biosynthetic process
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0032555	purine ribonucleotide binding
molecular_function	GO:0043021	ribonucleoprotein complex binding
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0043023	ribosomal large subunit binding
molecular_function	GO:0043022	ribosome binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G013590.1	CmoCh01G013590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006073	GTP binding domain	PRINTS	PR00326	GTP1OBG	coord: 111..129 score: 1.1E-18coord: 155..170 score: 1.1E-18coord: 89..109 score: 1.1
IPR006073	GTP binding domain	PFAM	PF01926	MMR_HSR1	coord: 89..169 score: 1.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 88..197 score: 5.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 84..253 score: 1.13
None	No IPR available	PANTHER	PTHR23305	GTP-BINDING PROTEIN-RELATED	coord: 75..254 score: 3.3
None	No IPR available	PANTHER	PTHR23305:SF12	GTP-BINDING PROTEIN-RELATED	coord: 75..254 score: 3.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G013590	Cucsa.058950	Cucumber (Gy14) v1	cgycmoB0074
CmoCh01G013590	CmaCh09G007390	Cucurbita maxima (Rimu)	cmacmoB051
CmoCh01G013590	CmaCh01G013040	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G013590	Cla023227	Watermelon (97103) v1	cmowmB453
CmoCh01G013590	Csa4G606030	Cucumber (Chinese Long) v2	cmocuB455
CmoCh01G013590	MELO3C010569	Melon (DHL92) v3.5.1	cmomeB439
CmoCh01G013590	ClCG11G016400	Watermelon (Charleston Gray)	cmowcgB387
CmoCh01G013590	CSPI04G21530	Wild cucumber (PI 183967)	cmocpiB459
CmoCh01G013590	Lsi04G018750	Bottle gourd (USVL1VR-Ls)	cmolsiB415
CmoCh01G013590	Cp4.1LG02g02510	Cucurbita pepo (Zucchini)	cmocpeB448
CmoCh01G013590	Cp4.1LG06g05790	Cucurbita pepo (Zucchini)	cmocpeB469
CmoCh01G013590	MELO3C010569.2	Melon (DHL92) v3.6.1	cmomedB503
CmoCh01G013590	CsaV3_4G031850	Cucumber (Chinese Long) v3	cmocucB0543
CmoCh01G013590	Cla97C11G222340	Watermelon (97103) v2	cmowmbB430
CmoCh01G013590	Bhi09G003021	Wax gourd	cmowgoB0620
CmoCh01G013590	CsGy4G020050	Cucumber (Gy14) v2	cgybcmoB477
CmoCh01G013590	Carg20056	Silver-seed gourd	carcmoB1401
CmoCh01G013590	Carg14776	Silver-seed gourd	carcmoB0430

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh01G013590	CmoCh09G007310	Cucurbita moschata (Rifu)	cmocmoB022

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G013590	Cucurbita moschata (Rifu)	cmocmoB013
CmoCh01G013590	Cucurbita maxima (Rimu)	cmacmoB041
CmoCh01G013590	Cucurbita pepo (Zucchini)	cmocpeB461