CmoCh01G013420 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh01G013420
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) (T3P18.6)
LocationCmo_Chr01 : 10641766 .. 10643285 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAACCTCTCCCTTTCCCTCTCCCTCTTCCTCCTCCTCAACCTCTCCGCCCTTCTCTCCACCCTCGCATGCGACTGCGACAAGCCCCCTTCCCACCGTCCTCCCGCCCCCAAGCACAAACCGCCGCATTTCCCCCCAAAACCCCCCAAATCCCCGCCCTACAAACCCCCCAAATCCCCCCCCCCTCCCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCTCCCTACAAACCCCCCGCCGTCAAACCCCCTCCTCCTCCCTATGTCCCAAAGCCGCCGGTATCCAAGCCTCCTCCACCCTACGTCCAACCACCAGTAGCCAAGCCTCCTCCACCCTACGTCCAACCACCAGTCTCCAAGCCTCCTCCCCCATACGTCCAGCCACCAGTAACCAAACCACCACCGCCACCAACGTACGTGCCAGTGCCTAGCCCACCACCACCAGTGAAGCCAGCTCCAGTAGTGCCATCACCAAACACACCGTGCCCACCGCCGCCGCCAAAGCAAGGGACATGCCCCATTGACACGCTGAAGCTGGGAGCATGTGTGGACTTGTTGGGTGGGCTAATCCATATCGGAATTGGCGACCAAACCAAACAAACTTGCTGCCCGGTTCTTGAAGGGCTCGTGGATTTGGACGCAGCGGTGTGCCTTTGCACCACCATTAGAGCTAAGCTCCTTAACATCAACCTCGTCATCCCCATTGCCCTACAATTACTCATCGACTGTGGCAAACACGCTCCCTCTGATTTCCAATGCCCCGCTTACTAG

mRNA sequence

ATGGGAAACCTCTCCCTTTCCCTCTCCCTCTTCCTCCTCCTCAACCTCTCCGCCCTTCTCTCCACCCTCGCATGCGACTGCGACAAGCCCCCTTCCCACCTAGCCAAGCCTCCTCCACCCTACGTCCAACCACCAGTCTCCAAGCCTCCTCCCCCATACGTCCAGCCACCAGTAACCAAACCACCACCGCCACCAACGTACGTGCCAGTGCCTAGCCCACCACCACCAGTGAAGCCAGCTCCAGTAGTGCCATCACCAAACACACCGTGCCCACCGCCGCCGCCAAAGCAAGGGACATGCCCCATTGACACGCTGAAGCTGGGAGCATGTGTGGACTTGTTGGGTGGGCTAATCCATATCGGAATTGGCGACCAAACCAAACAAACTTGCTGCCCGGTTCTTGAAGGGCTCGTGGATTTGGACGCAGCGGTGTGCCTTTGCACCACCATTAGAGCTAAGCTCCTTAACATCAACCTCGTCATCCCCATTGCCCTACAATTACTCATCGACTGTGGCAAACACGCTCCCTCTGATTTCCAATGCCCCGCTTACTAG

Coding sequence (CDS)

ATGGGAAACCTCTCCCTTTCCCTCTCCCTCTTCCTCCTCCTCAACCTCTCCGCCCTTCTCTCCACCCTCGCATGCGACTGCGACAAGCCCCCTTCCCACCTAGCCAAGCCTCCTCCACCCTACGTCCAACCACCAGTCTCCAAGCCTCCTCCCCCATACGTCCAGCCACCAGTAACCAAACCACCACCGCCACCAACGTACGTGCCAGTGCCTAGCCCACCACCACCAGTGAAGCCAGCTCCAGTAGTGCCATCACCAAACACACCGTGCCCACCGCCGCCGCCAAAGCAAGGGACATGCCCCATTGACACGCTGAAGCTGGGAGCATGTGTGGACTTGTTGGGTGGGCTAATCCATATCGGAATTGGCGACCAAACCAAACAAACTTGCTGCCCGGTTCTTGAAGGGCTCGTGGATTTGGACGCAGCGGTGTGCCTTTGCACCACCATTAGAGCTAAGCTCCTTAACATCAACCTCGTCATCCCCATTGCCCTACAATTACTCATCGACTGTGGCAAACACGCTCCCTCTGATTTCCAATGCCCCGCTTACTAG
Homology
[Close]
BLAST of CmoCh01G013420 vs. Swiss-Prot
Match: PRF1_SOLLC (36.4 kDa proline-rich protein OS=Solanum lycopersicum GN=TPRP-F1 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.3e-40
Identity = 107/179 (59.78%), Postives = 122/179 (68.16%), Query Frame = 1 

Query: 29  KPPSHLAKPPPPYVQPPVSKPP----PPYVQPPVTKPPP---------PPTYVPVPS-PP 88
           KPPS    P PP V PP+  PP    PP V PP+   PP         PP  +P P  P 
Sbjct: 171 KPPS----PTPPIVSPPIVYPPITPTPPVVSPPIIPTPPIVSPPFVPNPPVVIPPPYVPS 230

Query: 89  PPVKPAPVVPSPNTPCPPPPPK---------QGTCPIDTLKLGACVDLLGGLIHIGIGDQ 148
           PPV   P+VP+P TPCPPPPP          Q TCPID LKLGACVD+LGGLIHIGIG  
Sbjct: 231 PPVVTPPIVPTPPTPCPPPPPPPAIIPSPPAQPTCPIDALKLGACVDVLGGLIHIGIGGS 290

Query: 149 TKQTCCPVLEGLVDLDAAVCLCTTIRAKLLNINLVIPIALQLLI-DCGKHAPSDFQCPA 184
            KQTCCP+L GLVDLDAA+CLCTTIR KLLNIN+++PIALQ+LI DCGK+ P DF+CP+
Sbjct: 291 AKQTCCPLLGGLVDLDAAICLCTTIRLKLLNINIILPIALQVLIDDCGKYPPKDFKCPS 345

[Close]
BLAST of CmoCh01G013420 vs. Swiss-Prot
Match: ERLL3_ARATH (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana GN=At4g12500 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.9e-24
Identity = 83/181 (45.86%), Postives = 106/181 (58.56%), Query Frame = 1 

Query: 5   SLSLSLFLLLNLSALLSTLACDCDKPPSHLAKPPPPYVQPPVSKPPPPYVQPPVTKPPPP 64
           S SL+LF  LN+     T A DC    S     P P   P    P P Y  P +  P   
Sbjct: 6   STSLALFFALNILFFTLTTATDCRCNLS-----PKPRTVPSPKVPSPKYPSPSIPSPS-- 65

Query: 65  PTYVPVPSPPPPVKPAPVVPSPN-TPCPPP--PPKQGTCPIDTLKLGACVDLLGGLIHIG 124
              VP PS P P  P P VPSPN TP  PP  P   G CPID L+LG C ++L GL+++ 
Sbjct: 66  ---VPTPSVPTPSVPTPSVPSPNPTPVTPPRTPGSSGNCPIDALRLGVCANVLSGLLNVQ 125

Query: 125 IGDQTKQTCCPVLEGLVDLDAAVCLCTTIRAKLLNINLVIPIALQLLID-CGKHAPSDFQ 182
           +G  + Q CC +++GLVDLDAA+CLCT +RA +L INL +PI+L +L++ C +  PSDFQ
Sbjct: 126 LGQPSAQPCCSLIQGLVDLDAAICLCTALRANVLGINLNVPISLSVLLNVCNRRLPSDFQ 176

[Close]
BLAST of CmoCh01G013420 vs. Swiss-Prot
Match: ERLI1_ARATH (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana GN=EARLI1 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 7.3e-23
Identity = 77/186 (41.40%), Postives = 101/186 (54.30%), Query Frame = 1 

Query: 5   SLSLSLFLLLNLSALLSTLACDCDKPPSHLAKPPPPYVQPPVSKPPPPYVQPPVTKPPPP 64
           S S++LF  LN+     T A DC   PS                        P  KP P 
Sbjct: 6   SASIALFFALNIIFFTLTAATDCGCNPS------------------------PKHKPVPS 65

Query: 65  PTYVPVPSPPPPVKPAPVVPSPNTPCPPP--------PPKQGTCPIDTLKLGACVDLLGG 124
           P   PVPSP P   P+P VPSP+ P P P        P   G CPID L+LG C ++L  
Sbjct: 66  PKPKPVPSPKPKPVPSPSVPSPSVPSPNPRPVTPPRTPGSSGNCPIDALRLGVCANVLSS 125

Query: 125 LIHIGIGDQTKQTCCPVLEGLVDLDAAVCLCTTIRAKLLNINLVIPIALQLLID-CGKHA 182
           L++I +G  + Q CC +++GLVDLDAA+CLCT +RA +L INL +PI+L +L++ C +  
Sbjct: 126 LLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRANVLGINLNVPISLSVLLNVCNRKV 167

[Close]
BLAST of CmoCh01G013420 vs. Swiss-Prot
Match: ERLL2_ARATH (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana GN=At4g12490 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.6e-22
Identity = 84/181 (46.41%), Postives = 109/181 (60.22%), Query Frame = 1 

Query: 5   SLSLSLFLLLNLSALLSTLACDCDKPPSHLAKPPPPYVQPPVSKPPPPYVQPPVTKPPPP 64
           S SL+LF  LN+     T   +C   PS   +P P    P V  P  P   P V  P  P
Sbjct: 6   SASLALFFALNILFFTLTAGTNCRCNPSPKPRPLP---NPKVPSPKVP--TPSVPSPYVP 65

Query: 65  PTYVPVPSPPPPVKPAPVVPSPN-TPCPPP--PPKQGTCPIDTLKLGACVDLLGGLIHIG 124
              VP PS P P  P+P VPSPN TP  PP  P   G CPID L+LG C ++L GL+++ 
Sbjct: 66  TPSVPSPSVPTPSVPSPSVPSPNPTPVIPPRTPGSSGNCPIDALRLGVCANVLSGLLNVQ 125

Query: 125 IGDQTKQTCCPVLEGLVDLDAAVCLCTTIRAKLLNINLVIPIALQLLID-CGKHAPSDFQ 182
           +G  + Q CC +++GLVDLDAAVCLCT +RA +L INL +PI+L +L++ C +  PS+FQ
Sbjct: 126 LGQPSPQPCCSLIQGLVDLDAAVCLCTALRANVLGINLNVPISLSVLLNVCNRRLPSNFQ 181

[Close]
BLAST of CmoCh01G013420 vs. Swiss-Prot
Match: ERLL1_ARATH (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana GN=AZI1 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 8.9e-21
Identity = 76/183 (41.53%), Postives = 102/183 (55.74%), Query Frame = 1 

Query: 5   SLSLSLFLLLNLSALLSTLACDCDKPPSHLAKPPPPYVQPPVSKPPPPYVQPPVTKPPPP 64
           S SL+LF  LN+     T+A +C+  PS                        P  KP P 
Sbjct: 6   SASLALFFALNILFFTLTVATNCNCKPS------------------------PKPKPVPS 65

Query: 65  PTYVPVPSPPPPVKPAPVVPSPNTPCPPPPPKQ-----GTCPIDTLKLGACVDLLGGLIH 124
           P   PV  PPPP    P VPSPN P P  PP+       +CPID LKLG C ++L  L++
Sbjct: 66  PKPKPVQCPPPP---RPSVPSPN-PRPVTPPRTPGSSGNSCPIDALKLGVCANVLSSLLN 125

Query: 125 IGIGDQTKQTCCPVLEGLVDLDAAVCLCTTIRAKLLNINLVIPIALQLLID-CGKHAPSD 182
           I +G  + Q CC +++GLVD+DAA+CLCT +RA +L INL +PI+L +L++ C +  PS 
Sbjct: 126 IQLGQPSSQQCCSLIQGLVDVDAAICLCTALRANVLGINLNVPISLSVLLNVCNRKLPSG 160

[Close]
BLAST of CmoCh01G013420 vs. TrEMBL
Match: W9QT09_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009307 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.7e-42
Identity = 113/181 (62.43%), Postives = 127/181 (70.17%), Query Frame = 1 

Query: 29  KPPSHLAKPP----PPYV-QPPVSKPPPPYVQPPVTKPPP---------PPTYVPVPS-- 88
           KPP +  KPP    PPY+ +PPV  PPP   +PPV  PPP         PP YVP P   
Sbjct: 99  KPPPYTPKPPVVTPPPYIPKPPVVTPPPYVPKPPVVTPPPYTPKPPVVTPPPYVPTPPVV 158

Query: 89  PPPPVKPAPVVPSPN----TPCPPPPPKQG------TCPIDTLKLGACVDLLGGLIHIGI 148
            PPP  PAPVVP P+    TPCPPPPP         TCPIDTLKLGACVD+LGGLIHIGI
Sbjct: 159 KPPPSTPAPVVPKPSPPSETPCPPPPPSPSPPPPPRTCPIDTLKLGACVDVLGGLIHIGI 218

Query: 149 GDQTKQTCCPVLEGLVDLDAAVCLCTTIRAKLLNINLVIPIALQLLIDCGKHAPSDFQCP 184
           G   K TCCPVL+GLV LDAA+CLCTTI+AKLLNIN+++PIALQL++DCGK AP  FQCP
Sbjct: 219 GSSAKDTCCPVLQGLVGLDAALCLCTTIKAKLLNINIILPIALQLIVDCGKTAPPGFQCP 278

[Close]
BLAST of CmoCh01G013420 vs. TrEMBL
Match: A0A0D2PP72_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G094000 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.9e-41
Identity = 105/158 (66.46%), Postives = 118/158 (74.68%), Query Frame = 1 

Query: 31  PSHLAKPPPPYVQPPVSKPP-PPYVQPPVTKPPPPPTYVPVPSPP---PPVKPAPVVPSP 90
           P  L   PP Y  PP+  PP PP + PP+  PP PP  +P PSPP   PP  P    PSP
Sbjct: 292 PPTLPPKPPVYPSPPIVNPPTPPILPPPIVNPPTPPI-LPPPSPPIVNPPTPPIVKPPSP 351

Query: 91  NTPCPPPPPK-QGTCPIDTLKLGACVDLLGGLIHIGIGDQTKQTCCPVLEGLVDLDAAVC 150
            TPCPPPPP  Q TCPIDTLKLGACVD+LGGL+HIGIG   K TCCPVL+GL+DLDAA+C
Sbjct: 352 GTPCPPPPPPAQQTCPIDTLKLGACVDVLGGLVHIGIGSSAKDTCCPVLQGLLDLDAAIC 411

Query: 151 LCTTIRAKLLNINLVIPIALQLLIDCGKHAPSDFQCPA 184
           LCTTI+AKLLNIN++IPIALQ+LIDCGK  P  FQCPA
Sbjct: 412 LCTTIKAKLLNINIIIPIALQVLIDCGKTPPPGFQCPA 448

[Close]
BLAST of CmoCh01G013420 vs. TrEMBL
Match: C6TIZ0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 5.4e-41
Identity = 123/204 (60.29%), Postives = 136/204 (66.67%), Query Frame = 1 

Query: 1   MGNLSLS-LSLFLLLNLSALLSTLACDCDKPPSHLAKPPPPYVQPPVSKPP--------- 60
           MG  +L+ + L LLLNLS LL+ LAC     PS      PP V+PPV KPP         
Sbjct: 1   MGKFALANILLVLLLNLSTLLNVLACPYCPYPSPKPPKKPPVVKPPVHKPPKPCPPPKSS 60

Query: 61  --PPYVQPP-VTKPP--------PPPTYVPVPSPPPPVKP-APVVPSPNTPCPP-PPPKQ 120
             PP+V PP V KPP        P P +VP P P PPV P  P VP P  P  P PPP Q
Sbjct: 61  PKPPHVHPPYVPKPPHYPKPPVHPHPPHVPKPHPKPPVHPHPPYVPKPPPPVVPYPPPAQ 120

Query: 121 GTCPIDTLKLGACVDLLGGLIHIGIGDQTKQTCCPVLEGLVDLDAAVCLCTTIRAKLLNI 180
            TCPIDTLKLGACVD+LGGLIHIGIG   +QTCCPVL GLVDLDAAVCLCT IRAK+LNI
Sbjct: 121 PTCPIDTLKLGACVDVLGGLIHIGIGSSAQQTCCPVLAGLVDLDAAVCLCTIIRAKILNI 180

Query: 181 NLVIPIALQLLIDCGKHAPSDFQC 182
           N++IPIALQLLIDCGK  P  F+C
Sbjct: 181 NIIIPIALQLLIDCGKTPPDGFKC 204

[Close]
BLAST of CmoCh01G013420 vs. TrEMBL
Match: B9S3J8_RICCO (Repetitive proline-rich cell wall protein 2, putative OS=Ricinus communis GN=RCOM_0670360 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 9.2e-41
Identity = 104/164 (63.41%), Postives = 117/164 (71.34%), Query Frame = 1 

Query: 29  KPPSHLAKPPPPYVQPPVSKP---PPPYVQPPV------TKPPPPPTYVPVPSPPPPVKP 88
           KPP  +  PP P V PP S P    PP V PP+      T PP PP   P   PP P  P
Sbjct: 138 KPP--IVYPPNPPVTPPSSPPYIPKPPVVTPPIKPPTPPTLPPKPPVITPPTKPPTPETP 197

Query: 89  APVVPSPNTPCPPPPPKQGTCPIDTLKLGACVDLLGGLIHIGIGDQTKQTCCPVLEGLVD 148
            P  P P  PCPPPPPKQ TCPIDTLKLGACVD+LGGLIHIGIG   K  CCPVL+GLVD
Sbjct: 198 CPPPPPPPVPCPPPPPKQETCPIDTLKLGACVDVLGGLIHIGIGSSAKDACCPVLQGLVD 257

Query: 149 LDAAVCLCTTIRAKLLNINLVIPIALQLLIDCGKHAPSDFQCPA 184
           LDAA+CLCTTI+AKLLN+N++IPIAL++L+DCGK+ P  FQCPA
Sbjct: 258 LDAALCLCTTIKAKLLNLNIIIPIALEVLVDCGKNPPPGFQCPA 299

[Close]
BLAST of CmoCh01G013420 vs. TrEMBL
Match: A0A0V0HHT0_SOLCH (Putative ovule protein (Fragment) OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.2e-40
Identity = 107/170 (62.94%), Postives = 122/170 (71.76%), Query Frame = 1 

Query: 29  KPPSHLAKPPPPYVQPPVSKPP----PPYVQPPVTKPPP---------PPTYVPVPS-PP 88
           KPPS    P PP V PP+  PP    PP V PP+   PP         PP  +P P  P 
Sbjct: 29  KPPS----PTPPIVSPPIVYPPITPTPPIVSPPIIPTPPIVSPPFVPNPPVVIPPPYVPS 88

Query: 89  PPVKPAPVVPSPNTPCPPPPPKQGTCPIDTLKLGACVDLLGGLIHIGIGDQTKQTCCPVL 148
           PPV   P+VP+P TPCPPPPP Q TCPID LKLGACVD+LGGLIHIGIG   KQTCCP+L
Sbjct: 89  PPVVTPPIVPTPPTPCPPPPPAQPTCPIDALKLGACVDVLGGLIHIGIGGSAKQTCCPLL 148

Query: 149 EGLVDLDAAVCLCTTIRAKLLNINLVIPIALQLLI-DCGKHAPSDFQCPA 184
            GLVDLDAA+CLCTTIR KLLNIN+++PIALQ+LI DCGK+ P DF+CP+
Sbjct: 149 GGLVDLDAAICLCTTIRLKLLNINIILPIALQVLIDDCGKYPPKDFKCPS 194

[Close]
BLAST of CmoCh01G013420 vs. TAIR10
Match: AT4G15160.1 (AT4G15160.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 161.0 bits (406), Expect = 7.0e-40
Identity = 108/184 (58.70%), Postives = 123/184 (66.85%), Query Frame = 1 

Query: 29  KPPSHLAKPPPPYVQPP----VSKPPPPYVQPP---VTKPPPPPT-YVPVPS-------- 88
           KPP+ +  PPPPYV+PP    V  PPPPYV+PP     KPPPPPT Y P P         
Sbjct: 83  KPPT-VKPPPPPYVKPPPPPTVKPPPPPYVKPPPPPTVKPPPPPTPYTPPPPTPYTPPPP 142

Query: 89  -----PPPPVKPAPVVPSPNTPCPPPPP-------KQGTCPIDTLKLGACVDLLGGLIHI 148
                PPP V P P  P+P  PCPPPPP       K  TCPID LKLGACVD+LGGLIHI
Sbjct: 143 TVKPPPPPVVTPPPPTPTPEAPCPPPPPTPYPPPPKPETCPIDALKLGACVDVLGGLIHI 202

Query: 149 GIG-DQTKQTCCPVLEGLVDLDAAVCLCTTIRAKLLNINLVIPIALQLLIDCGK-HAPSD 183
           G+G    K  CCP+L+ LV LDAAVCLCTTIRAKLLNI+L+IPIAL++L+DCGK   P  
Sbjct: 203 GLGKSYAKAKCCPLLDDLVGLDAAVCLCTTIRAKLLNIDLIIPIALEVLVDCGKTPPPRG 262

[Close]
BLAST of CmoCh01G013420 vs. TAIR10
Match: AT3G22120.1 (AT3G22120.1 cell wall-plasma membrane linker protein)

HSP 1 Score: 147.5 bits (371), Expect = 8.0e-36
Identity = 102/178 (57.30%), Postives = 115/178 (64.61%), Query Frame = 1 

Query: 29  KPPSHLAKPPPPYVQPPVSKPP---PPYVQPP------VTKPPPPPTYVPVPSPPPPV-- 88
           KPP     PP P   PPV  PP   PP + PP      VT P P P  +  P+P PPV  
Sbjct: 157 KPPPTPCPPPTPTPTPPVVTPPTPTPPVITPPTPTPPVVTPPTPTPPVITPPTPTPPVIT 216

Query: 89  --KPAPVVPSPNTPCPP---------PPPKQGTCPIDTLKLGACVDLLGGLIHIGIG-DQ 148
              P P V +P TP PP         P P   TCPIDTLKLGACVD+LGGLIHIG+G   
Sbjct: 217 PPTPTPPVVTPPTPTPPVVTPPTPTPPTPIPETCPIDTLKLGACVDVLGGLIHIGLGKSH 276

Query: 149 TKQTCCPVLEGLVDLDAAVCLCTTIRAKLLNINLVIPIALQLLIDCGKHAPSDFQCPA 184
            K  CCPVL GL+DLDAAVCLCTTI+ KLLNI+LV+PIAL+LL+DCGK  PSDF+CPA
Sbjct: 277 AKAECCPVLGGLLDLDAAVCLCTTIKLKLLNIDLVLPIALELLLDCGKTPPSDFKCPA 334

[Close]
BLAST of CmoCh01G013420 vs. TAIR10
Match: AT3G22142.1 (AT3G22142.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 146.4 bits (368), Expect = 1.8e-35
Identity = 98/169 (57.99%), Postives = 119/169 (70.41%), Query Frame = 1 

Query: 30   PPSHLAKPP---PPYVQPPVSKPP---PPYVQPPVTKPP---PPPTYVPVPSPP---PPV 89
            PP  +AKPP   PP V PPV+ PP   PP  +PPV  PP   PP    PV +PP   PPV
Sbjct: 1314 PP--VAKPPVATPPTVTPPVATPPIAKPPGARPPVATPPVATPPIAKSPVATPPMTKPPV 1373

Query: 90   KPAPVVPSPNTPCP---PPPPKQGTCPIDTLKLGACVDLLGGLIHIGIGDQTKQTCCPVL 149
              +P+   P    P   PP     TCPIDTLKLG+CVDLLGGL+HIGIG   K+ CCPV+
Sbjct: 1374 ASSPIATPPIAKTPIATPPTTMPKTCPIDTLKLGSCVDLLGGLVHIGIGKSAKEKCCPVV 1433

Query: 150  EGLVDLDAAVCLCTTIRAKLLNINLVIPIALQLLIDCGKHAPSDFQCPA 184
            EGLVDLDAAVCLCTTI+AKLLNI++++PIAL++L++CGK+ P  F+CPA
Sbjct: 1434 EGLVDLDAAVCLCTTIKAKLLNIDVILPIALEVLLNCGKNPPPGFKCPA 1480

[Close]
BLAST of CmoCh01G013420 vs. TAIR10
Match: AT1G62500.1 (AT1G62500.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 129.0 bits (323), Expect = 2.9e-30
Identity = 92/176 (52.27%), Postives = 112/176 (63.64%), Query Frame = 1 

Query: 31  PSHLAKPP---PPYVQPPVSKPP--------PPYVQPPVTKPPP--PPTYVPVPSPPPPV 90
           P  + +PP   PP   PPV+ PP        PP + PPVT PP   PP   P    PP +
Sbjct: 119 PPPITRPPIIIPPIQPPPVTTPPGLLPPITTPPGLLPPVTTPPGLLPPVTTPPGLLPPII 178

Query: 91  KPAPV-VPSPNTPCPPPPP----------KQGTCPIDTLKLGACVDLLGGLIHIGIGDQT 150
            P PV VP P++  PP  P          KQ TCPI+ LKLGACVD+LGGLIHIG+G+  
Sbjct: 179 NPPPVTVPPPSSGYPPYGPPSGGGGGGGGKQPTCPINALKLGACVDVLGGLIHIGLGNPV 238

Query: 151 KQTCCPVLEGLVDLDAAVCLCTTIRAKLLNINLVIPIALQLLIDCGKHAPSDFQCP 183
           +  CCPVL+GL++L+AAVCLCTTIR KLLN+N+ IP+ALQ LI CG + PS F CP
Sbjct: 239 ENVCCPVLQGLLELEAAVCLCTTIRLKLLNLNIFIPLALQALITCGINPPSGFVCP 294

[Close]
BLAST of CmoCh01G013420 vs. TAIR10
Match: AT2G10940.1 (AT2G10940.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 114.0 bits (284), Expect = 9.8e-26
Identity = 83/172 (48.26%), Postives = 107/172 (62.21%), Query Frame = 1 

Query: 30  PPSHLAK-PPPPYVQPPVSKPP---PPYVQPPVTKPPPPPTYVP-VPSPPPPVKPAPVVP 89
           PP  + K P PP   P +  PP   P    PP++  P PP   P +P PP P+   P++P
Sbjct: 119 PPVTVPKLPVPPVTVPKLPVPPVTVPKLPLPPISGLPIPPVVGPNLPLPPLPIV-GPILP 178

Query: 90  SPNTP-------CPPPP----PKQG----TCPIDTLKLGACVDLLGGLIHIGIGDQTKQT 149
              TP       CPPPP    P  G    TCPIDTLKLGACVDLLGGL+ IG+GD     
Sbjct: 179 PGTTPPATGGKDCPPPPGSVKPPSGGGKATCPIDTLKLGACVDLLGGLVKIGLGDPAVNK 238

Query: 150 CCPVLEGLVDLDAAVCLCTTIRAKLLNINLVIPIALQLLIDCGKHAPSDFQC 182
           CCP+L+GLV+++AA CLCTT++ K L++NL +P+ALQLL+ CGK+ P  + C
Sbjct: 239 CCPLLKGLVEVEAAACLCTTLKLKALDLNLYVPVALQLLLTCGKNPPPGYTC 289

[Close]
BLAST of CmoCh01G013420 vs. NCBI nr
Match: gi|659129328|ref|XP_008464631.1| (PREDICTED: 36.4 kDa proline-rich protein-like, partial [Cucumis melo])

HSP 1 Score: 233.8 bits (595), Expect = 2.4e-58
Identity = 131/160 (81.88%), Postives = 140/160 (87.50%), Query Frame = 1 

Query: 29  KPPSHLAKPPPPYVQPPVSKPPPPYVQPPV----TKPPPPPTYVPVPSPPPPVKPAPVVP 88
           KPP+   KPPPPYVQPPV+KPPPP   PP     + PPPPP YVPVP P PP+KPAPVVP
Sbjct: 60  KPPT--VKPPPPYVQPPVAKPPPPPSPPPPVVYPSPPPPPPVYVPVP-PSPPLKPAPVVP 119

Query: 89  SPNTPCPPPPPKQGTCPIDTLKLGACVDLLGGLIHIGIGDQTKQTCCPVLEGLVDLDAAV 148
           SP+TPCPPPPPK  TCPIDTLKLGACVDLLGGLIHIGIGD+TKQTCCPVLEGLVDLDAAV
Sbjct: 120 SPSTPCPPPPPKPETCPIDTLKLGACVDLLGGLIHIGIGDRTKQTCCPVLEGLVDLDAAV 179

Query: 149 CLCTTIRAKLLNINLVIPIALQLLIDCGKHAPSDFQCPAY 185
           CLCTTI+AKLLNINL+IPIALQ+LIDCGKH PS FQCP Y
Sbjct: 180 CLCTTIKAKLLNINLIIPIALQVLIDCGKHPPSGFQCPNY 216

[Close]
BLAST of CmoCh01G013420 vs. NCBI nr
Match: gi|778695528|ref|XP_011654010.1| (PREDICTED: 36.4 kDa proline-rich protein [Cucumis sativus])

HSP 1 Score: 233.4 bits (594), Expect = 3.1e-58
Identity = 149/241 (61.83%), Postives = 163/241 (67.63%), Query Frame = 1 

Query: 4   LSLSLSLFLLLNLSALLS--TLACDCDKPPSHLAKP---------------PPPYVQP-- 63
           LS+SL LFL  NLS+LL+  TLACDCDK PS+   P               PPPY +P  
Sbjct: 5   LSISLLLFLFFNLSSLLNANTLACDCDKSPSYPPSPKPKHPPHYPPKPPKSPPPY-KPPT 64

Query: 64  -------------------PVSKPPPPYVQPPVTKPPPPPTYVP---VPSPP-------- 123
                              P  KPPPPYVQPPV KPPPPP+  P    PSPP        
Sbjct: 65  VNPPPPYIPKPPPPYVPKPPTVKPPPPYVQPPVAKPPPPPSPPPPVVYPSPPPPPVVYPS 124

Query: 124 -----------PPVKPAPVVPSPNTPCPPPPPKQGTCPIDTLKLGACVDLLGGLIHIGIG 183
                      PP+KPAPVVPSP+TPCPPPPPK+ TCPIDTLKLGACVDLLGGLIHIGIG
Sbjct: 125 PPPPPYVPVPSPPLKPAPVVPSPSTPCPPPPPKRETCPIDTLKLGACVDLLGGLIHIGIG 184

Query: 184 DQTKQTCCPVLEGLVDLDAAVCLCTTIRAKLLNINLVIPIALQLLIDCGKHAPSDFQCPA 185
           D+TKQTCCPVLEGLVDLDAAVCLCTTI+AKLLNINL+IPIALQ+L+DCGKH PS FQCP 
Sbjct: 185 DRTKQTCCPVLEGLVDLDAAVCLCTTIKAKLLNINLIIPIALQVLVDCGKHPPSGFQCPN 244

[Close]
BLAST of CmoCh01G013420 vs. NCBI nr
Match: gi|778708449|ref|XP_011656197.1| (PREDICTED: 36.4 kDa proline-rich protein-like [Cucumis sativus])

HSP 1 Score: 218.0 bits (554), Expect = 1.4e-53
Identity = 125/161 (77.64%), Postives = 135/161 (83.85%), Query Frame = 1 

Query: 30  PPSHLAKPPPPYVQPPVSKPPPPYVQP-----PVTKP-PPPPTYVPVPSPPPPVKPAPVV 89
           P  + + PPPP V P  S PPPP V P     PV  P PPPP YVPVPSPP  +KPAPVV
Sbjct: 248 PVVYPSPPPPPVVYP--SPPPPPVVYPSPPPPPVVYPSPPPPPYVPVPSPP--LKPAPVV 307

Query: 90  PSPNTPCPPPPPKQGTCPIDTLKLGACVDLLGGLIHIGIGDQTKQTCCPVLEGLVDLDAA 149
           PSP+TPCPPPPPK+ TCPIDTLKLGACVDLLGGLIHIGIGD+TKQTCCPVLEGLVDLDAA
Sbjct: 308 PSPSTPCPPPPPKRETCPIDTLKLGACVDLLGGLIHIGIGDRTKQTCCPVLEGLVDLDAA 367

Query: 150 VCLCTTIRAKLLNINLVIPIALQLLIDCGKHAPSDFQCPAY 185
           VCLCTTI+AKLLNINL+IPIALQ+L+DCGKH PS FQCP Y
Sbjct: 368 VCLCTTIKAKLLNINLIIPIALQVLVDCGKHPPSGFQCPNY 404

[Close]
BLAST of CmoCh01G013420 vs. NCBI nr
Match: gi|658013996|ref|XP_008342310.1| (PREDICTED: 36.4 kDa proline-rich protein [Malus domestica])

HSP 1 Score: 189.9 bits (481), Expect = 4.0e-45
Identity = 128/212 (60.38%), Postives = 148/212 (69.81%), Query Frame = 1 

Query: 3   NLSLSLSLFLLLNLSALLSTLACDCDKPPSHL----AKPPP------PYVQPPVSKPPPP 62
           N +L+L L L+LNL +LL++LA +   PP H+    AKPPP      P+V+PP+ KPPP 
Sbjct: 4   NYALALLLVLILNLGSLLTSLA-NSYCPPPHVKPPHAKPPPHVPTKPPHVKPPIVKPPP- 63

Query: 63  YVQPPVTKPPP---PPTYVP----VPSPPPPVKPAPVVP-----SPNTPCPPPPPK---- 122
           Y +PPV KPPP   PP   P    VPSPPP   P PVVP        TPCPPPPPK    
Sbjct: 64  YPKPPVPKPPPHPKPPVVKPPPVVVPSPPPTPTPTPVVPVKPPPPTETPCPPPPPKLVPP 123

Query: 123 -----QGTCPIDTLKLGACVDLLGGLIHIGIGDQTKQTCCPVLEGLVDLDAAVCLCTTIR 182
                + TCPIDTLKLGACVD+LGGLIHIGIG   K  CCPVL+GLVDLDAA+CLCTTI+
Sbjct: 124 PPSPPKDTCPIDTLKLGACVDVLGGLIHIGIGSSAKDXCCPVLQGLVDLDAAICLCTTIK 183

Query: 183 AKLLNINLVIPIALQLLIDCGKHAPSDFQCPA 184
           AKLLN+NL+IPIALQ+LI CGK  PS FQCPA
Sbjct: 184 AKLLNVNLIIPIALQVLIACGKTPPSGFQCPA 213

[Close]
BLAST of CmoCh01G013420 vs. NCBI nr
Match: gi|658065187|ref|XP_008368547.1| (PREDICTED: 36.4 kDa proline-rich protein-like [Malus domestica])

HSP 1 Score: 186.0 bits (471), Expect = 5.8e-44
Identity = 119/192 (61.98%), Postives = 136/192 (70.83%), Query Frame = 1 

Query: 3   NLSLSLSLFLLLNLSALLSTLA-CDCDKP-----PSHLAKPPPPYVQPPVSKPP----PP 62
           N +L+L L L LNL +LL++LA C+C  P     P    K PPP+V+PP  KPP    PP
Sbjct: 4   NYALALLLVLFLNLGSLLTSLANCNCQPPKYPPVPHLPPKKPPPHVKPPHVKPPIVKPPP 63

Query: 63  YVQPPVTKPPPPPTYVPVPSPPPPVKPAPVVPSPNTPCPPPP-PKQGTCPIDTLKLGACV 122
           Y +PPV KPPP P        PP V P P  P P T  PPPP P + TCPIDTLKLGACV
Sbjct: 64  YPKPPVAKPPPHPK-------PPVVLPPPSTPKPPTVKPPPPSPPKDTCPIDTLKLGACV 123

Query: 123 DLLGGLIHIGIGDQTKQTCCPVLEGLVDLDAAVCLCTTIRAKLLNINLVIPIALQLLIDC 182
           D+LGGLIHIGIG   K  CCPVL+GLVDLDAA+CLCTTI+AKLLN+NL+IPIALQ+LI C
Sbjct: 124 DVLGGLIHIGIGSSAKDACCPVLQGLVDLDAAICLCTTIKAKLLNVNLIIPIALQVLIAC 183

Query: 183 GKHAPSDFQCPA 184
           GK  PS FQCPA
Sbjct: 184 GKTPPSGFQCPA 188

The following BLAST results are available for this feature:
BLAST of CmoCh01G013420 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PRF1_SOLLC2.3e-4059.7836.4 kDa proline-rich protein OS=Solanum lycopersicum GN=TPRP-F1 PE=2 SV=1[more]
ERLL3_ARATH3.9e-2445.86pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana GN=At4g12500 PE=2 ... [more]
ERLI1_ARATH7.3e-2341.40Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana GN=EARLI1 PE=1 SV=1[more]
ERLL2_ARATH1.6e-2246.41pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana GN=At4g12490 PE=2 ... [more]
ERLL1_ARATH8.9e-2141.53pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana GN=AZI1 PE=1 SV=1[more]
BLAST of CmoCh01G013420 vs. TrEMBL
Match NameE-valueIdentityDescription
W9QT09_9ROSA1.7e-4262.43Uncharacterized protein OS=Morus notabilis GN=L484_009307 PE=4 SV=1[more]
A0A0D2PP72_GOSRA1.9e-4166.46Uncharacterized protein OS=Gossypium raimondii GN=B456_001G094000 PE=4 SV=1[more]
C6TIZ0_SOYBN5.4e-4160.29Putative uncharacterized protein OS=Glycine max PE=2 SV=1[more]
B9S3J8_RICCO9.2e-4163.41Repetitive proline-rich cell wall protein 2, putative OS=Ricinus communis GN=RCO... [more]
A0A0V0HHT0_SOLCH1.2e-4062.94Putative ovule protein (Fragment) OS=Solanum chacoense PE=4 SV=1[more]
BLAST of CmoCh01G013420 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G15160.17.0e-4058.70 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT3G22120.18.0e-3657.30 cell wall-plasma membrane linker protein[more]
AT3G22142.11.8e-3557.99 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT1G62500.12.9e-3052.27 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT2G10940.19.8e-2648.26 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
BLAST of CmoCh01G013420 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659129328|ref|XP_008464631.1|2.4e-5881.88PREDICTED: 36.4 kDa proline-rich protein-like, partial [Cucumis melo][more]
gi|778695528|ref|XP_011654010.1|3.1e-5861.83PREDICTED: 36.4 kDa proline-rich protein [Cucumis sativus][more]
gi|778708449|ref|XP_011656197.1|1.4e-5377.64PREDICTED: 36.4 kDa proline-rich protein-like [Cucumis sativus][more]
gi|658013996|ref|XP_008342310.1|4.0e-4560.38PREDICTED: 36.4 kDa proline-rich protein [Malus domestica][more]
gi|658065187|ref|XP_008368547.1|5.8e-4461.98PREDICTED: 36.4 kDa proline-rich protein-like [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016140Bifunc_inhib/LTP/seed_store
IPR027923Hydrophob_seed
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042546 cell wall biogenesis
biological_process GO:0008150 biological_process
cellular_component GO:0005618 cell wall
cellular_component GO:0005575 cellular_component
molecular_function GO:0005199 structural constituent of cell wall
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G013420.1CmoCh01G013420.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 100..181
score: 3.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 102..182
score: 3.78
IPR027923Hydrophobic seed proteinPFAMPF14547Hydrophob_seedcoord: 99..182
score: 1.4
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 28..40
score: 8.7E-10coord: 78..95
score: 8.7E-10coord: 61..77
score: 8.7E-10coord: 40..61
score: 8.7
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 98..182
score: 6.5
NoneNo IPR availablePANTHERPTHR31731FAMILY NOT NAMEDcoord: 30..184
score: 2.2