CmoCh01G011620 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G011620
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Extracellular ligand-gated ion channel
Location	Cmo_Chr01 : 9491669 .. 9494323 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCACGTGTCATTTTCTTGCCTGTGATCCTTCACTTTGTTTATGTTGTCCACATACGCTCCTCCATTTGTATCTTTTAAGAAAATAAAAATGAAAATGAAAATAAAAATAAAATAAAATAAAATAAAATAAAAATAAAAAACCCCTAAACCCAATTGTTGCGAAGTTTTTTCGTTCTTCTCTGCAAATCCCTTCTCCTTCAACCTTCAACAAATCAAACCTATAAAAGGTGAAGTGAAAGAAATTCCAATTTCCTTATCATCATCATCTTCAATCAAGCAATCCACAATCGGAATCCTGTTCGTCCCTATCAATTTGTACAAAAAGCGAAGAAATCAAGCAGGGGAGGGAGGAACAATCAACAATCCTGAGTTTCGCTCGCAATCGCCATGGGCGACACCAGCAGAGAGGCGTTGATTAGCAGAAAGGCGAAGGTGTTCAATCGCTCAGCCTCTCACGCTCAGGACGAATTGCATAGCTTCAGATCGTATTTGCGATGGATGTGCGTGGATCAATCGGACATTTGGAGCGCTGGATTGTCGTGGTCGGTGTTCTTCCTCTTCGCTATCGTCGTTCCAGCGACCTCGCATTTCCATCTCGCCTGTTCTTCCTGTGATAGCCATCACGCCAGGCCGTTCGATCGCGTCGTTCAATTGTCGCTCAGCAGTGTGGCGACGGTTTCCTTCCTCTGCCTTTCGAATTTCATCAGGAGGTACGGACTTAGGAGATTCTTGTTCTTCGATAGGCTCTGCGATGAAAGCGAAACTGTGAGAAGAGGATACACCAACAAGTTCAATGTAAGTTATATTCCAACTCGCAACTCATCTATCTATCTCCTTCTTCGCATTCCACTGATTGGATCTGGATTCTGATTCCTTGATTGTTCAATCGTTTTTGTTCTTGAATTTGAATTCAAGGTAAATTGTTAAGAGAAATTTCCATGGAAGTTAAGAGAGAGCTTGAATTTGTGAAAGATTTAGGGATTAATATCTGGCTTTTGGACAAATCTGCTGGTTTAATTCGGTTTTCTGTCCATTCAATTGCCTGTCAACTTCTTTGGAATTTTTTTGCCTTTGATTGCGGTATTTTTCTGTTTCTGGTAAGAACTCATTCAGCGTTTAGACTCGTTTTAATATGAACTTCTCCGAATTTGTTTTATTTTTTCAAATTCTATTTTTAGAAATAATATCCTTTTTTTTTTTAATTAAAGAACAATTTAAAAAATTATTTATAGGGACAAATAATGCTTAGAAATGAACTTAAACAAAAAGAAAAAGAAAAAGACAATTTAATTTAATTTAATTATTTTTATTTTTATTTATTTATTGCAGAGATCACTGAGAGTACTATCAGCATTTGTGGTCCCATGCTTCGCGGCGGAGAGCGCGTACAAAATCTGGTGGTACGCGTCAGGCGCGTCGCAAATCCCATTCCTGGGGAACGTTATAGTGAGCGACGCAGTAGCGTGCTCCATGGAGCTGCTGTCGTGGCTGTACAGAACCACAGTGATCTTCCTTGTGTGCATCCTCTTCCGTCTGATCTGCGACCTCCAGATCCTACGGCTGCAGGACTTCGCCACCGTGTTCCAGGTAGACTCCGACGTGGGGTCGGTCCTTTCCGAGCATTTGAGAATCAGACGGCACTTGAGAATCATCAGCCACCGGTACCGCGCCTTCATATTGTGGTCGTTGATCCTCGTCACCGGCAGCCAGTTCACTTCTCTACTCATGACTACCAAGTCCTCCTCCCTCAACATCTACATCGCCGGCGAACTTGCGGTACGCGAAATCAAACCCCTCTTAACAAATTCGTTTTAAAACGGAAATGCTGAAAGCGAAATTGGAGAATATCTGTTTGATTGCAATTAATTTTAGATTGAATTAAAAACAAGTATGAAAATGGGTGCAGCTGTGCTCGATGACGCTACTGACAAGTCTGATGATACTTCTACGGAGCGCCACAAAAATCACCCACAAAGCGCAGTCAGTGACGGCGCTAGCTGCCAAGTGGCACGTGTGTGCGACGTTGGATTCTTTCGACGTGACAGACGGGGAGACCCCCATGGCTGCCGCCGCTCCCACCGACGGAAACCTTATGTTTCCGGTGACACCGCGCGGCGATGAGGAATCAGAGGGGGAGGAAGGTTGCGACGAAGAAGATGAACTGGACAACACCAAGTTGATCCCAGCCTACGCGTACAGCACCATCTCATTCCAAAAGAGACAGGCCTTAGGTAATCCCAAAATTCCTAATCTAAATCGAAAATTAAGTAGAAATTAAGTATTGATTAATGGGTTTGGTTTGGTTTGGTTGGTGAATGCAGTGACGTACTTCGAGAACAACAGAGCTGGGATAACCATATACGGGTTTACCCTGGATAGGACTACACTCCACACCATCTTTGGAATAGAGTTATCCTTGGTTCTTTGGCTGCTTGGCAAAACCATCGGTTTTTCTTAAACCCCAAATTCAACTTCTTTATTATTATTATTATTATCGTAATTAATTAATTAATTCCCACTTCCCACTGCCTTGTATTTGTGTGCTGTATTCTTCCATCTTTGTTTAATTACTGTCCCCTCCTCCCCCTCCCACGTATTGTTTTCTGCGTTTTCTTATAATTTACATTTTACTTTGTATTTTTTTTTTATTTTCT

mRNA sequence

GCCACGTGTCATTTTCTTGCCTGTGATCCTTCACTTTGTTTATGTTGTCCACATACGCTCCTCCATTTGTATCTTTTAAGAAAATAAAAATGAAAATGAAAATAAAAATAAAATAAAATAAAATAAAATAAAAATAAAAAACCCCTAAACCCAATTGTTGCGAAGTTTTTTCGTTCTTCTCTGCAAATCCCTTCTCCTTCAACCTTCAACAAATCAAACCTATAAAAGGTGAAGTGAAAGAAATTCCAATTTCCTTATCATCATCATCTTCAATCAAGCAATCCACAATCGGAATCCTGTTCGTCCCTATCAATTTGTACAAAAAGCGAAGAAATCAAGCAGGGGAGGGAGGAACAATCAACAATCCTGAGTTTCGCTCGCAATCGCCATGGGCGACACCAGCAGAGAGGCGTTGATTAGCAGAAAGGCGAAGGTGTTCAATCGCTCAGCCTCTCACGCTCAGGACGAATTGCATAGCTTCAGATCGTATTTGCGATGGATGTGCGTGGATCAATCGGACATTTGGAGCGCTGGATTGTCGTGGTCGGTGTTCTTCCTCTTCGCTATCGTCGTTCCAGCGACCTCGCATTTCCATCTCGCCTGTTCTTCCTGTGATAGCCATCACGCCAGGCCGTTCGATCGCGTCGTTCAATTGTCGCTCAGCAGTGTGGCGACGGTTTCCTTCCTCTGCCTTTCGAATTTCATCAGGAGGTACGGACTTAGGAGATTCTTGTTCTTCGATAGGCTCTGCGATGAAAGCGAAACTGTGAGAAGAGGATACACCAACAAGTTCAATAGATCACTGAGAGTACTATCAGCATTTGTGGTCCCATGCTTCGCGGCGGAGAGCGCGTACAAAATCTGGTGGTACGCGTCAGGCGCGTCGCAAATCCCATTCCTGGGGAACGTTATAGTGAGCGACGCAGTAGCGTGCTCCATGGAGCTGCTGTCGTGGCTGTACAGAACCACAGTGATCTTCCTTGTGTGCATCCTCTTCCGTCTGATCTGCGACCTCCAGATCCTACGGCTGCAGGACTTCGCCACCGTGTTCCAGGTAGACTCCGACGTGGGGTCGGTCCTTTCCGAGCATTTGAGAATCAGACGGCACTTGAGAATCATCAGCCACCGGTACCGCGCCTTCATATTGTGGTCGTTGATCCTCGTCACCGGCAGCCAGTTCACTTCTCTACTCATGACTACCAAGTCCTCCTCCCTCAACATCTACATCGCCGGCGAACTTGCGCTGTGCTCGATGACGCTACTGACAAGTCTGATGATACTTCTACGGAGCGCCACAAAAATCACCCACAAAGCGCAGTCAGTGACGGCGCTAGCTGCCAAGTGGCACGTGTGTGCGACGTTGGATTCTTTCGACGTGACAGACGGGGAGACCCCCATGGCTGCCGCCGCTCCCACCGACGGAAACCTTATGTTTCCGGTGACACCGCGCGGCGATGAGGAATCAGAGGGGGAGGAAGGTTGCGACGAAGAAGATGAACTGGACAACACCAAGTTGATCCCAGCCTACGCGTACAGCACCATCTCATTCCAAAAGAGACAGGCCTTAGTGACGTACTTCGAGAACAACAGAGCTGGGATAACCATATACGGGTTTACCCTGGATAGGACTACACTCCACACCATCTTTGGAATAGAGTTATCCTTGGTTCTTTGGCTGCTTGGCAAAACCATCGGTTTTTCTTAAACCCCAAATTCAACTTCTTTATTATTATTATTATTATCGTAATTAATTAATTAATTCCCACTTCCCACTGCCTTGTATTTGTGTGCTGTATTCTTCCATCTTTGTTTAATTACTGTCCCCTCCTCCCCCTCCCACGTATTGTTTTCTGCGTTTTCTTATAATTTACATTTTACTTTGTATTTTTTTTTTATTTTCT

Coding sequence (CDS)

ATGGGCGACACCAGCAGAGAGGCGTTGATTAGCAGAAAGGCGAAGGTGTTCAATCGCTCAGCCTCTCACGCTCAGGACGAATTGCATAGCTTCAGATCGTATTTGCGATGGATGTGCGTGGATCAATCGGACATTTGGAGCGCTGGATTGTCGTGGTCGGTGTTCTTCCTCTTCGCTATCGTCGTTCCAGCGACCTCGCATTTCCATCTCGCCTGTTCTTCCTGTGATAGCCATCACGCCAGGCCGTTCGATCGCGTCGTTCAATTGTCGCTCAGCAGTGTGGCGACGGTTTCCTTCCTCTGCCTTTCGAATTTCATCAGGAGGTACGGACTTAGGAGATTCTTGTTCTTCGATAGGCTCTGCGATGAAAGCGAAACTGTGAGAAGAGGATACACCAACAAGTTCAATAGATCACTGAGAGTACTATCAGCATTTGTGGTCCCATGCTTCGCGGCGGAGAGCGCGTACAAAATCTGGTGGTACGCGTCAGGCGCGTCGCAAATCCCATTCCTGGGGAACGTTATAGTGAGCGACGCAGTAGCGTGCTCCATGGAGCTGCTGTCGTGGCTGTACAGAACCACAGTGATCTTCCTTGTGTGCATCCTCTTCCGTCTGATCTGCGACCTCCAGATCCTACGGCTGCAGGACTTCGCCACCGTGTTCCAGGTAGACTCCGACGTGGGGTCGGTCCTTTCCGAGCATTTGAGAATCAGACGGCACTTGAGAATCATCAGCCACCGGTACCGCGCCTTCATATTGTGGTCGTTGATCCTCGTCACCGGCAGCCAGTTCACTTCTCTACTCATGACTACCAAGTCCTCCTCCCTCAACATCTACATCGCCGGCGAACTTGCGCTGTGCTCGATGACGCTACTGACAAGTCTGATGATACTTCTACGGAGCGCCACAAAAATCACCCACAAAGCGCAGTCAGTGACGGCGCTAGCTGCCAAGTGGCACGTGTGTGCGACGTTGGATTCTTTCGACGTGACAGACGGGGAGACCCCCATGGCTGCCGCCGCTCCCACCGACGGAAACCTTATGTTTCCGGTGACACCGCGCGGCGATGAGGAATCAGAGGGGGAGGAAGGTTGCGACGAAGAAGATGAACTGGACAACACCAAGTTGATCCCAGCCTACGCGTACAGCACCATCTCATTCCAAAAGAGACAGGCCTTAGTGACGTACTTCGAGAACAACAGAGCTGGGATAACCATATACGGGTTTACCCTGGATAGGACTACACTCCACACCATCTTTGGAATAGAGTTATCCTTGGTTCTTTGGCTGCTTGGCAAAACCATCGGTTTTTCTTAA

Homology

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BLAST of CmoCh01G011620 vs. TrEMBL
Match: A0A0A0K352_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G179620 PE=4 SV=1)

HSP 1 Score: 756.5 bits (1952), Expect = 1.8e-215
Identity = 396/439 (90.21%), Postives = 413/439 (94.08%), Query Frame = 1


Query: 1   MGDTSREALISRKAKVFNRSASHAQDELHSFRSYLRWMCVDQSDIWSAGLSWSVFFLFAI 60
           MGD++REALISRK+ VF RS SHA DELHSFRSYLRWMCVDQSDIW+AGLSWS+FFLFAI
Sbjct: 1   MGDSNREALISRKSSVFKRSVSHAHDELHSFRSYLRWMCVDQSDIWTAGLSWSMFFLFAI 60

Query: 61  VVPATSHFHLACSSCDSHHARPFDRVVQLSLSSVATVSFLCLSNFIRRYGLRRFLFFDRL 120
           +VPATSHF LACSSCDS+HARPFDRVVQLSLSSVATVSFLCLS+FIRRYGLRRFLFFD+L
Sbjct: 61  IVPATSHFVLACSSCDSNHARPFDRVVQLSLSSVATVSFLCLSSFIRRYGLRRFLFFDKL 120

Query: 121 CDESETVRRGYTNKFNRSLRVLSAFVVPCFAAESAYKIWWYASGASQIPFLGNVIVSDAV 180
           CDESETVRRGYT KFNRSLRVLS FV+PCFAAESAYKIWWYASGASQIPFLGNVIVSDAV
Sbjct: 121 CDESETVRRGYTIKFNRSLRVLSTFVIPCFAAESAYKIWWYASGASQIPFLGNVIVSDAV 180

Query: 181 ACSMELLSWLYRTTVIFLVCILFRLICDLQILRLQDFATVFQVDSDVGSVLSEHLRIRRH 240
           AC+MELLSWLYRTTVIFLVCILFRLICDLQILRLQDFATVFQVDSDV SVLSEHLRIRRH
Sbjct: 181 ACAMELLSWLYRTTVIFLVCILFRLICDLQILRLQDFATVFQVDSDVASVLSEHLRIRRH 240

Query: 241 LRIISHRYRAFILWSLILVTGSQFTSLLMTTKSSS-LNIYIAGELALCSMTLLTSLMILL 300
           LRIISHRYR FIL SL+LVTGSQFTSLL+TTKSSS LNIYIAGELALCSMTLLTSLMILL
Sbjct: 241 LRIISHRYRVFILGSLVLVTGSQFTSLLITTKSSSNLNIYIAGELALCSMTLLTSLMILL 300

Query: 301 RSATKITHKAQSVTALAAKWHVCATLDSFDVTDGETPMAAAAPTDGNLMFPVTPRGDEES 360
           RSATKITHKAQSVTALAAKWHVCATLDSFDVTDGETPMA+      +  FP      EES
Sbjct: 301 RSATKITHKAQSVTALAAKWHVCATLDSFDVTDGETPMASTI----HQAFPPHHGVGEES 360

Query: 361 EGEEGCDEEDELDNTKLIPAYAYSTISFQKRQALVTYFENNRAGITIYGFTLDRTTLHTI 420
           EG+EGCD ED+LDNTKLIPAYAYSTISFQKRQALVTYFENNRAGITIYGFTLDRTTLHTI
Sbjct: 361 EGDEGCD-EDDLDNTKLIPAYAYSTISFQKRQALVTYFENNRAGITIYGFTLDRTTLHTI 420

Query: 421 FGIELSLVLWLLGKTIGFS 439
           FGIELSLVLWLLGKTIGFS
Sbjct: 421 FGIELSLVLWLLGKTIGFS 434

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BLAST of CmoCh01G011620 vs. TrEMBL
Match: A0A061F5U3_THECC (F11F12.5 protein OS=Theobroma cacao GN=TCM_030801 PE=4 SV=1)

HSP 1 Score: 651.0 bits (1678), Expect = 1.0e-183
Identity = 337/439 (76.77%), Postives = 381/439 (86.79%), Query Frame = 1


Query: 1   MGDTSREALISRKAKVFNRSASHAQDELHSFRSYLRWMCVDQSDIWSAGLSWSVFFLFAI 60
           MGD +RE L+ R    F R+ SHA DEL SFR+YLRWMCVDQSD+W+A LSW VF L  +
Sbjct: 1   MGD-NREPLVDRTR--FMRTISHAHDELQSFRTYLRWMCVDQSDVWTACLSWFVFILLGL 60

Query: 61  VVPATSHFHLACSSCDSHHARPFDRVVQLSLSSVATVSFLCLSNFIRRYGLRRFLFFDRL 120
           VVPA SHF LACS+CD+ HARP+D VVQLSLSSVA++SF+CL+ F+++YGLRRFLFFD+L
Sbjct: 61  VVPAMSHFLLACSTCDARHARPYDWVVQLSLSSVASLSFVCLTRFVKKYGLRRFLFFDKL 120

Query: 121 CDESETVRRGYTNKFNRSLRVLSAFVVPCFAAESAYKIWWYASGASQIPFLGNVIVSDAV 180
           CDESETVR+GYT + NRSL+++S FV+PCF AESAYK+WWYASGASQIPFLG V +SDA+
Sbjct: 121 CDESETVRKGYTGQLNRSLKIVSIFVLPCFVAESAYKVWWYASGASQIPFLGIVWLSDAM 180

Query: 181 ACSMELLSWLYRTTVIFLVCILFRLICDLQILRLQDFATVFQVDSDVGSVLSEHLRIRRH 240
           AC MEL SWLYRTTV FLVC+LFRLIC+LQ+LR+QDFA VFQVDSDVGSVLSEHLRIRRH
Sbjct: 181 ACMMELCSWLYRTTVFFLVCVLFRLICNLQVLRIQDFAQVFQVDSDVGSVLSEHLRIRRH 240

Query: 241 LRIISHRYRAFILWSLILVTGSQFTSLLMTTKSSS-LNIYIAGELALCSMTLLTSLMILL 300
           LRIISHRYRAFILW LILVTGSQFTSLL+TTK+++ LNIY AGELA+CS+TLLT L ILL
Sbjct: 241 LRIISHRYRAFILWCLILVTGSQFTSLLITTKANAELNIYKAGELAMCSITLLTGLSILL 300

Query: 301 RSATKITHKAQSVTALAAKWHVCATLDSFDVTDGETPMAAAAPTDGNLMFPVTPRGDEES 360
           RSATKITHKAQSVT LAAKWHVCATLDSFD  DGETP   A    G   FP     D ES
Sbjct: 301 RSATKITHKAQSVTCLAAKWHVCATLDSFDANDGETPRIPAI--HGCQSFPYVGT-DGES 360

Query: 361 EGEEGCDEEDELDNTKLIPAYAYSTISFQKRQALVTYFENNRAGITIYGFTLDRTTLHTI 420
           +GE+  DEED++DN+KLIPAYAYSTIS+QKRQALVTYFENNRAGITIYGFTLDR+TLHTI
Sbjct: 361 DGEDAGDEEDDIDNSKLIPAYAYSTISYQKRQALVTYFENNRAGITIYGFTLDRSTLHTI 420

Query: 421 FGIELSLVLWLLGKTIGFS 439
           FGIELSLVLWLLGKTIG S
Sbjct: 421 FGIELSLVLWLLGKTIGIS 433

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BLAST of CmoCh01G011620 vs. TrEMBL
Match: D7LAY2_ARALL (Extracellular ligand-gated ion channel OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479553 PE=4 SV=1)

HSP 1 Score: 636.7 bits (1641), Expect = 2.0e-179
Identity = 331/438 (75.57%), Postives = 374/438 (85.39%), Query Frame = 1


Query: 2   GDTSREALISRKAKVFNRSASHAQDELHSFRSYLRWMCVDQSDIWSAGLSWSVFFLFAIV 61
           G  +RE LI+R+ K F RS SHAQDEL SFR YLRWMCVDQS  W+A LSWS+F +F +V
Sbjct: 17  GRGTRERLINRETK-FTRSVSHAQDELQSFRKYLRWMCVDQSSPWTAVLSWSMFVVFTLV 76

Query: 62  VPATSHFHLACSSCDSHHARPFDRVVQLSLSSVATVSFLCLSNFIRRYGLRRFLFFDRLC 121
           VPATSHF LAC+ CDSHH+RP+D VVQLSLSS A +SFLCLS F+ +YGLRRFLFFD+L 
Sbjct: 77  VPATSHFMLACADCDSHHSRPYDSVVQLSLSSFAALSFLCLSRFVSKYGLRRFLFFDKLW 136

Query: 122 DESETVRRGYTNKFNRSLRVLSAFVVPCFAAESAYKIWWYASGASQIPFLGNVIVSDAVA 181
           DESETVRRGYTN+ NRSL++LS FV PCF A S+YKIWWYASGASQIPFLGNVI+SD VA
Sbjct: 137 DESETVRRGYTNQLNRSLKILSYFVTPCFLAMSSYKIWWYASGASQIPFLGNVILSDTVA 196

Query: 182 CSMELLSWLYRTTVIFLVCILFRLICDLQILRLQDFATVFQVDSDVGSVLSEHLRIRRHL 241
           C MEL SWLYRTTVIFLVC+LFRLIC LQILRLQDFA VFQ+DSDVGS+LSEHLRIRRHL
Sbjct: 197 CLMELCSWLYRTTVIFLVCVLFRLICHLQILRLQDFAQVFQMDSDVGSILSEHLRIRRHL 256

Query: 242 RIISHRYRAFILWSLILVTGSQFTSLLMTTKS-SSLNIYIAGELALCSMTLLTSLMILLR 301
           RIISHRYR FIL SLILVTGSQF SLL+TTK+ + LNIY AGELALCSMTL+T+L+ILLR
Sbjct: 257 RIISHRYRTFILLSLILVTGSQFYSLLITTKAYAELNIYRAGELALCSMTLVTALLILLR 316

Query: 302 SATKITHKAQSVTALAAKWHVCATLDSFDVTDGETPMAAAAPTDGNLMFPVTPRGDEESE 361
           SA+KITHKAQ+VT LAAKWHVCAT++SF+  DGETP        G+  +P T   + ES+
Sbjct: 317 SASKITHKAQAVTCLAAKWHVCATIESFETVDGETPRLVDR-ASGHGYYP-TDDDNGESD 376

Query: 362 GEEGCDEEDELDNTKLIPAYAYSTISFQKRQALVTYFENNRAGITIYGFTLDRTTLHTIF 421
            E+  DEED+ DN  LIPAYAYSTISFQKRQALV YFENNRAGIT++GFTLDR+TLHTIF
Sbjct: 377 SEDYGDEEDDFDNNNLIPAYAYSTISFQKRQALVNYFENNRAGITVFGFTLDRSTLHTIF 436

Query: 422 GIELSLVLWLLGKTIGFS 439
           GIE+SLVLWLLGKTIG S
Sbjct: 437 GIEMSLVLWLLGKTIGIS 451

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BLAST of CmoCh01G011620 vs. TrEMBL
Match: B9GJ40_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s36620g PE=4 SV=1)

HSP 1 Score: 636.3 bits (1640), Expect = 2.7e-179
Identity = 328/437 (75.06%), Postives = 379/437 (86.73%), Query Frame = 1


Query: 3   DTSREALISRKAKVFNRSASHAQDELHSFRSYLRWMCVDQSDIWSAGLSWSVFFLFAIVV 62
           + +RE+LI+R  K+ +RS SHA DEL SFRSYLRWMCVDQS + +A LSW++F LF +VV
Sbjct: 4   NNNRESLINRNNKL-SRSQSHAYDELKSFRSYLRWMCVDQSSMGTACLSWTMFVLFGLVV 63

Query: 63  PATSHFHLACSSCDSHHARPFDRVVQLSLSSVATVSFLCLSNFIRRYGLRRFLFFDRLCD 122
           PATSHF LACSSCDS H RP+D VVQLSLSSVAT+SF+CLS F+R+YGLRRFLFFD+L D
Sbjct: 64  PATSHFVLACSSCDSRHGRPYDSVVQLSLSSVATLSFVCLSRFVRKYGLRRFLFFDKLWD 123

Query: 123 ESETVRRGYTNKFNRSLRVLSAFVVPCFAAESAYKIWWYASGASQIPFLGNVIVSDAVAC 182
           ESETVRRGYTN+ N SL++L  FV+PCF AE AYKIWWYASGASQIPFLGNV++SD VAC
Sbjct: 124 ESETVRRGYTNQLNSSLKLLLIFVIPCFVAECAYKIWWYASGASQIPFLGNVVLSDTVAC 183

Query: 183 SMELLSWLYRTTVIFLVCILFRLICDLQILRLQDFATVFQVDSDVGSVLSEHLRIRRHLR 242
            MEL SWLYRT VIFLVC+LF LIC LQILRLQDFA VFQVDSDVGSVLSEH RIRRHLR
Sbjct: 184 IMELCSWLYRTIVIFLVCVLFHLICHLQILRLQDFARVFQVDSDVGSVLSEHFRIRRHLR 243

Query: 243 IISHRYRAFILWSLILVTGSQFTSLLMTTKSSS-LNIYIAGELALCSMTLLTSLMILLRS 302
           IISHRYR F+L SLIL+TGSQF+SLL+TTK+ + ++IY AGELALCS+TL+T L+I+LRS
Sbjct: 244 IISHRYRGFVLCSLILITGSQFSSLLITTKAHAVVDIYRAGELALCSITLVTGLLIILRS 303

Query: 303 ATKITHKAQSVTALAAKWHVCATLDSFDVTDGETPMAAAAPTDGNLMFPVTPRGDEESEG 362
           ATKITHKAQ+VT+LAAKWH+CATLD+FD T+GETP       D   +FPV    D ES+G
Sbjct: 304 ATKITHKAQAVTSLAAKWHICATLDTFDATEGETPR-----HDSGQVFPVVGT-DGESDG 363

Query: 363 EEGCDEEDELDNTKLIPAYAYSTISFQKRQALVTYFENNRAGITIYGFTLDRTTLHTIFG 422
           ++  DEEDELDN+KLIPAYAYSTISFQKRQALVTYFENNRAGIT+YGF LDR+TLH+IFG
Sbjct: 364 DDAGDEEDELDNSKLIPAYAYSTISFQKRQALVTYFENNRAGITVYGFILDRSTLHSIFG 423

Query: 423 IELSLVLWLLGKTIGFS 439
           +EL+LVLWLLGKTIG S
Sbjct: 424 VELALVLWLLGKTIGIS 433

[Close]

BLAST of CmoCh01G011620 vs. TrEMBL
Match: A0A0D2QY93_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G443500 PE=4 SV=1)

HSP 1 Score: 635.2 bits (1637), Expect = 6.0e-179
Identity = 325/439 (74.03%), Postives = 376/439 (85.65%), Query Frame = 1


Query: 1   MGDTSREALISRKAKVFNRSASHAQDELHSFRSYLRWMCVDQSDIWSAGLSWSVFFLFAI 60
           M DT+RE L+ R  + F R+ SHAQDELHSFR+YLRWMCVDQS+IW+A LSW +F +  +
Sbjct: 1   MEDTTREPLMDRSTR-FQRTISHAQDELHSFRTYLRWMCVDQSNIWTASLSWFLFIVLGL 60

Query: 61  VVPATSHFHLACSSCDSHHARPFDRVVQLSLSSVATVSFLCLSNFIRRYGLRRFLFFDRL 120
           VVP  SHF LACSSCD+ HARP+D VVQLSLSSV+T+SF+CL++F+++YGL+RFLFFD+L
Sbjct: 61  VVPCLSHFFLACSSCDAKHARPYDWVVQLSLSSVSTMSFVCLTSFVKKYGLKRFLFFDKL 120

Query: 121 CDESETVRRGYTNKFNRSLRVLSAFVVPCFAAESAYKIWWYASGASQIPFLGNVIVSDAV 180
           C+ESE VR+GYT K NRSL+++S+FV+PCF AE+AYK+WWYASGASQIPFLG V +SD+V
Sbjct: 121 CNESEIVRKGYTAKLNRSLKIVSSFVIPCFLAETAYKVWWYASGASQIPFLGIVWLSDSV 180

Query: 181 ACSMELLSWLYRTTVIFLVCILFRLICDLQILRLQDFATVFQVDSDVGSVLSEHLRIRRH 240
           AC MEL SWLYRTTV FLVC+LF L+C+LQ+LR+QDFA VFQVDSDVGSVLSEHLRIRRH
Sbjct: 181 ACFMELCSWLYRTTVFFLVCVLFHLVCNLQVLRIQDFAQVFQVDSDVGSVLSEHLRIRRH 240

Query: 241 LRIISHRYRAFILWSLILVTGSQFTSLLMTTKSSS-LNIYIAGELALCSMTLLTSLMILL 300
           LRIISHRYR+FILW LILVTGSQFTSLL+T K++S LNIY AGEL +CS+TL+T L ILL
Sbjct: 241 LRIISHRYRSFILWCLILVTGSQFTSLLVTLKATSELNIYKAGELLMCSLTLVTGLCILL 300

Query: 301 RSATKITHKAQSVTALAAKWHVCATLDSFDVTDGETPMAAAAPTDGNLMFPVTPRGDEES 360
           RSATKITHKAQSVT LA+KWHVCATLDSFDV DGETP   A        FP     D ES
Sbjct: 301 RSATKITHKAQSVTCLASKWHVCATLDSFDVNDGETPRTPAIHV--RQSFP-NVGTDGES 360

Query: 361 EGEEGCDEEDELDNTKLIPAYAYSTISFQKRQALVTYFENNRAGITIYGFTLDRTTLHTI 420
           E E+  +EED+LDN KLIPAYAYSTIS+QKR ALVTYFENNRAGITIYGF LDR+TLHTI
Sbjct: 361 ESEDVGEEEDDLDNNKLIPAYAYSTISYQKRHALVTYFENNRAGITIYGFMLDRSTLHTI 420

Query: 421 FGIELSLVLWLLGKTIGFS 439
           FGIELSLVLWLL KTIG S
Sbjct: 421 FGIELSLVLWLLSKTIGIS 435

[Close]

BLAST of CmoCh01G011620 vs. TAIR10
Match: AT3G20300.1 (AT3G20300.1 Protein of unknown function (DUF3537))

HSP 1 Score: 634.8 bits (1636), Expect = 3.9e-182
Identity = 330/435 (75.86%), Postives = 373/435 (85.75%), Query Frame = 1


Query: 5   SREALISRKAKVFNRSASHAQDELHSFRSYLRWMCVDQSDIWSAGLSWSVFFLFAIVVPA 64
           +RE LI+R+ K F RS SHAQDELHSFR YLRWMCVDQS  W+A LSWS+F +F +VVPA
Sbjct: 21  TRERLINRENK-FTRSVSHAQDELHSFRKYLRWMCVDQSSPWTAVLSWSMFVVFTLVVPA 80

Query: 65  TSHFHLACSSCDSHHARPFDRVVQLSLSSVATVSFLCLSNFIRRYGLRRFLFFDRLCDES 124
           TSHF LACS CDSHH+RP+D VVQLSLSS A +SFLCLS F+ +YGLRRFLFFD+L DES
Sbjct: 81  TSHFMLACSDCDSHHSRPYDSVVQLSLSSFAALSFLCLSRFVSKYGLRRFLFFDKLWDES 140

Query: 125 ETVRRGYTNKFNRSLRVLSAFVVPCFAAESAYKIWWYASGASQIPFLGNVIVSDAVACSM 184
           ETVR GYTN+ NRSL++LS FV PCF A S+YKIWWYASGASQIPFLGNVI+SD VAC M
Sbjct: 141 ETVRLGYTNQLNRSLKILSYFVSPCFLAMSSYKIWWYASGASQIPFLGNVILSDTVACLM 200

Query: 185 ELLSWLYRTTVIFLVCILFRLICDLQILRLQDFATVFQVDSDVGSVLSEHLRIRRHLRII 244
           EL SWLYRTTVIFLVC+LFRLIC LQILRLQDFA VFQ+DSDVGS+LSEHLRIRRHLRII
Sbjct: 201 ELCSWLYRTTVIFLVCVLFRLICHLQILRLQDFAQVFQMDSDVGSILSEHLRIRRHLRII 260

Query: 245 SHRYRAFILWSLILVTGSQFTSLLMTTKS-SSLNIYIAGELALCSMTLLTSLMILLRSAT 304
           SHRYR FIL SLILVTGSQF SLL+TTK+ + LNIY AGELALCSMTL+T+L+ILLRSA+
Sbjct: 261 SHRYRTFILLSLILVTGSQFYSLLITTKAYAELNIYRAGELALCSMTLVTALLILLRSAS 320

Query: 305 KITHKAQSVTALAAKWHVCATLDSFDVTDGETPMAAAAPTDGNLMFPVTPRGDEESEGEE 364
           KITHKAQ+VT LAAKWHVCAT++SF+  DGETP        G+  +P T   + ES+ E+
Sbjct: 321 KITHKAQAVTCLAAKWHVCATIESFETVDGETPRLVDR-ASGHGYYP-TDDDNGESDSED 380

Query: 365 GCDEEDELDNTKLIPAYAYSTISFQKRQALVTYFENNRAGITIYGFTLDRTTLHTIFGIE 424
             DEED+ DN  LIPAYAYSTISFQKRQALV YFENNR+GIT++GFTLDR+TLHTIFGIE
Sbjct: 381 YGDEEDDFDNNNLIPAYAYSTISFQKRQALVNYFENNRSGITVFGFTLDRSTLHTIFGIE 440

Query: 425 LSLVLWLLGKTIGFS 439
           +SLVLWLLGKTIG S
Sbjct: 441 MSLVLWLLGKTIGIS 452

[Close]

BLAST of CmoCh01G011620 vs. TAIR10
Match: AT1G50630.1 (AT1G50630.1 Protein of unknown function (DUF3537))

HSP 1 Score: 605.9 bits (1561), Expect = 2.0e-173
Identity = 313/432 (72.45%), Postives = 362/432 (83.80%), Query Frame = 1


Query: 15  KVFNRSASHAQDELHSFRSYLRWMCVDQSDIWSAGLSWSVFFLFAIVVPATSHFHLACSS 74
           K+FNR  SH QDELHSFR YLRWMCVD S  W+A LSW++F +F +VVPA SHF LAC+ 
Sbjct: 24  KIFNRCVSHQQDELHSFRKYLRWMCVDHSSPWTAILSWTMFIVFTLVVPAISHFLLACAD 83

Query: 75  CDSHHARPFDRVVQLSLSSVATVSFLCLSNFIRRYGLRRFLFFDRLCDESETVRRGYTNK 134
           CDS+H+RP+D VVQLSLSSVATVSFLCL+ F+ +YGLRRFLFFD+L DESETVRR YTN+
Sbjct: 84  CDSYHSRPYDSVVQLSLSSVATVSFLCLTRFVSKYGLRRFLFFDKLWDESETVRRNYTNQ 143

Query: 135 FNRSLRVLSAFVVPCFAAESAYKIWWYASGASQIPFLGNVIVSDAVACSMELLSWLYRTT 194
            N SL ++S FV+PCF+A SAYKIWWYASG S+IPFLGN ++SD VAC MEL SWLYRTT
Sbjct: 144 LNTSLHIVSYFVIPCFSAMSAYKIWWYASGGSRIPFLGNAVLSDTVACIMELCSWLYRTT 203

Query: 195 VIFLVCILFRLICDLQILRLQDFATVFQVDSDVGSVLSEHLRIRRHLRIISHRYRAFILW 254
           VIFLVC+LFRLIC LQILRLQDFA +FQ+DSDVGS+LSEHLRIRRHLRIISHRYR+FIL 
Sbjct: 204 VIFLVCVLFRLICHLQILRLQDFAKLFQIDSDVGSILSEHLRIRRHLRIISHRYRSFILC 263

Query: 255 SLILVTGSQFTSLLMTTKS-SSLNIYIAGELALCSMTLLTSLMILLRSATKITHKAQSVT 314
            LILVTGSQF+SLL+TTK+ + +NIY AGELALCSMTL+T+L+ILLRSA+KITHKAQ+VT
Sbjct: 264 LLILVTGSQFSSLLITTKAYTEVNIYRAGELALCSMTLVTALLILLRSASKITHKAQAVT 323

Query: 315 ALAAKWHVCATLDSFDVT------DGETP-MAAAAPTDGNLMFPVTPRGDEESEGEEGCD 374
            LAAKWHVCATL+SFD T        ETP + A    D N +  V      ES+ +E  D
Sbjct: 324 CLAAKWHVCATLESFDQTVESFDQTVETPTLVARNNNDNNNVHDVVTL--TESDSDEYGD 383

Query: 375 EEDELDNTKLIPAYAYSTISFQKRQALVTYFENNRAGITIYGFTLDRTTLHTIFGIELSL 434
           EED+LDN  +IP YA+ST+SFQKRQALV+YFENN AGIT+YGFTLDR TLHTIFG+ELSL
Sbjct: 384 EEDDLDNNDIIPVYAFSTMSFQKRQALVSYFENNSAGITVYGFTLDRGTLHTIFGLELSL 443

Query: 435 VLWLLGKTIGFS 439
           VLWLLGKTIG S
Sbjct: 444 VLWLLGKTIGIS 453

[Close]

BLAST of CmoCh01G011620 vs. TAIR10
Match: AT4G22270.1 (AT4G22270.1 Protein of unknown function (DUF3537))

HSP 1 Score: 427.9 bits (1099), Expect = 7.3e-120
Identity = 237/429 (55.24%), Postives = 311/429 (72.49%), Query Frame = 1


Query: 11  SRKAKVFNRSASHAQDELHSFRSYLRWMCVDQSDIWSAGLSWSVFFLFAIVVPATSHFHL 70
           +R + + N+          +F S + W   DQS+  +A LSWSVFFL  ++VP  SHF L
Sbjct: 15  TRPSAIINKQQPEFPASRFTFMSLVLWF--DQSNFGTALLSWSVFFLLVVIVPLISHFLL 74

Query: 71  ACSSCDSHHARPFDRVVQLSLSSVATVSFLCLSNFIRRYGLRRFLFFDRLCDESETVRRG 130
            CS CD HH RP+D +VQLSLS  A +SF+ LS + R++G+RRFLF D+L D S+ VR  
Sbjct: 75  VCSDCDFHHRRPYDVIVQLSLSIFAGISFVSLSIWSRKFGMRRFLFLDKLWDVSDKVRIE 134

Query: 131 YTNKFNRSLRVLSAFVVPCFAAESAYKIWWYASGASQIPFLGNVIVSDAVACSMELLSWL 190
           Y  +  RSL+ L  FV+P    E+ Y+IWWY SG +QIP++ N I+S  VAC+++L SWL
Sbjct: 135 YEAEIQRSLKRLMIFVLPSLTLEATYRIWWYISGFNQIPYIINPILSHVVACTLQLSSWL 194

Query: 191 YRTTVIFLVCILFRLICDLQILRLQDFATVFQVD-SDVGSVLSEHLRIRRHLRIISHRYR 250
           YR ++  +VCIL+++ C LQ LRL DFA  F  + +DV S L EH +IRR+LRI+SHR+R
Sbjct: 195 YRNSLFIIVCILYKITCHLQTLRLDDFARCFASEITDVRSALGEHQKIRRNLRIVSHRFR 254

Query: 251 AFILWSLILVTGSQFTSLLMTTKSS-SLNIYIAGELALCSMTLLTSLMILLRSATKITHK 310
            FIL SLILVT +QF +LL TT++S ++NIY  GELALCS++L+T + I LRSATKITHK
Sbjct: 255 RFILLSLILVTATQFMALLTTTRASVAVNIYEVGELALCSLSLVTGVFICLRSATKITHK 314

Query: 311 AQSVTALAAKWHVCATLDSFDVTDGETPMAAAAPTDGNLMFPVTPRGD--EESEGEEGCD 370
           AQSVT+LAAKW+VCAT+DSFD  DGET      PT   +   V+ RG+  E S+ EEG +
Sbjct: 315 AQSVTSLAAKWNVCATVDSFDHLDGET------PTGSIIESQVSLRGNAIETSDDEEG-E 374

Query: 371 EEDELDNTKLIPAYAYSTISFQKRQALVTYFENNRAGITIYGFTLDRTTLHTIFGIELSL 430
            +D+LDNTK+ P YA +TIS+QKRQALVTY ENN+AGIT+YGF +DR+ L+TIFGIEL+L
Sbjct: 375 GDDDLDNTKIHPIYA-NTISYQKRQALVTYLENNKAGITVYGFLVDRSWLNTIFGIELAL 433

Query: 431 VLWLLGKTI 436
           +LWLL KTI
Sbjct: 435 LLWLLNKTI 433

[Close]

BLAST of CmoCh01G011620 vs. TAIR10
Match: AT4G03820.2 (AT4G03820.2 Protein of unknown function (DUF3537))

HSP 1 Score: 382.5 bits (981), Expect = 3.5e-106
Identity = 213/412 (51.70%), Postives = 286/412 (69.42%), Query Frame = 1


Query: 30  SFRSYLRWMCVDQSDIWSAGLSWSVFFLFAIVVPATSHFHLACSSCDSHHARPFDRVVQL 89
           SF     W   DQS+     LSWS+FFL A++VP  SHF L C+ CD  H RP+D +VQL
Sbjct: 31  SFPRLFLWF--DQSNRIKTLLSWSIFFLLAVIVPMISHFVLICADCDFKHRRPYDGLVQL 90

Query: 90  SLSSVATVSFLCLSNFIRRYGLRRFLFFDRLCDESETVRRGYTNKFNRSLRVLSAFVVPC 149
           SLS  A +SF+ LS++ ++YG+RRFLFFD+L D S+ VR GY  K  RS+++L+ FV+P 
Sbjct: 91  SLSIFAGISFVSLSDWSKKYGIRRFLFFDKLKDVSDKVRIGYEAKIQRSMKLLAIFVLPS 150

Query: 150 FAAESAYKIWWYASGASQIPFLGNVIVSDAVACSMELLSWLYRTTVIFLVCILFRLICDL 209
              ++ Y+IWWYASG +QIP++ N  +S  +AC+++L SWLYRT++  + CIL++ IC L
Sbjct: 151 TTLQAIYRIWWYASGFNQIPYIINPTLSHVLACTLQLSSWLYRTSLFIIACILYQNICHL 210

Query: 210 QILRLQDFATVFQVD-SDVGSVLSEHLRIRRHLRIISHRYRAFILWSLILVTGSQFTSLL 269
           Q+LRL +FA  F  +  D  S+L+EHL+IRR L+I+SHR+R FIL SL  VT +QF +LL
Sbjct: 211 QVLRLDEFARCFASEIKDFSSILAEHLKIRRELKIVSHRFRRFILLSLFFVTATQFMALL 270

Query: 270 MTTKSS-SLNIYIAGELALCSMTLLTSLMILLRSATKITHKAQSVTALAAKWHVCATLDS 329
            T ++S   NIY  GELALCS +L++ L I L+SAT++THKAQSVT++A KW+VCA+LD+
Sbjct: 271 TTIRASVPFNIYEVGELALCSTSLVSGLFICLKSATQMTHKAQSVTSIATKWNVCASLDT 330

Query: 330 FDVT-DGETPMAAAAPTDGNLMF---PVTPRGDEESEGEEGCDEEDELDNTKLIPAYAYS 389
           FDV  DGETP          ++     V    D++ EG EG D + E+      P +A  
Sbjct: 331 FDVLYDGETPKCPTTTQHSQILSRRRNVVQSSDDDEEG-EGDDNDLEIH-----PIFA-R 390

Query: 390 TISFQKRQALVTYFENNRAGITIYGFTLDRTTLHTIFGIELSLVLWLLGKTI 436
            IS QKRQALVTY ENNRAGIT+YGF +D+T L  IF IEL+L+LWLL KTI
Sbjct: 391 AISSQKRQALVTYLENNRAGITVYGFLVDKTWLRMIFSIELALLLWLLKKTI 433

[Close]

BLAST of CmoCh01G011620 vs. TAIR10
Match: AT1G67570.1 (AT1G67570.1 Protein of unknown function (DUF3537))

HSP 1 Score: 226.5 bits (576), Expect = 3.2e-59
Identity = 141/414 (34.06%), Postives = 239/414 (57.73%), Query Frame = 1


Query: 28  LHSFRSYLRWMCVDQSDIWSAGLSWSVFFLFAIVVPATSHFHLACSSCDSHHARPFDRVV 87
           L    ++L  +  +QS   S  LSW VF    +V+P T      C  C+ +  + F+  +
Sbjct: 51  LEWLETFLTLLGFNQSSKQSLVLSWIVFLSIGLVLPVTVLELGHCLGCERYQYKSFELNI 110

Query: 88  QLSLSSVATVSFLCLSNFIRRYGLRRFLFFDRLCDESETVRRGYTNKFNRSLRVLSAFVV 147
            +S + +A VS LC+S+ +R++G+R+FLF D+L    + ++  Y  +   S+R+L+ + +
Sbjct: 111 VVSQALLAGVSLLCVSHNLRKHGIRKFLFVDQLSGRMDRLKAQYIQQILNSVRLLAVWSL 170

Query: 148 PCFAAESAYKIWWYASGASQIPFLGNVIVSDAVACSMELLSWLYRTTVIFLVCILFRLIC 207
           PCFA +   +I          P+L     S A+  SM +LSW Y +T+      +F L+C
Sbjct: 171 PCFALKGVREIIRMYYVPHDQPWL-----SVAILLSM-ILSWTYLSTIFLAASAMFHLVC 230

Query: 208 DLQILRLQDFATVFQVDSDVGSVLSEHLRIRRHLRIISHRYRAFILWSLILVTGSQFTSL 267
           +LQ++  +D+A + + +S++   + EH+R+R +L  ISHR+R F+L   ++VT SQFT+L
Sbjct: 231 NLQVIHFEDYAKLLEGESEISLFIYEHMRLRHYLSKISHRFRIFLLLQFLVVTASQFTTL 290

Query: 268 LMTTKSSSLNIYI-AGELALCSMTLLTSLMILLRSATKITHKAQSVTALAAKWHV---CA 327
             TT  S    YI  G+ A+ ++  +  +++ L +ATKI+H+AQ++ ++A++WH    C+
Sbjct: 291 FQTTAYSGRITYINGGDFAVSAVVQVVGIILCLHAATKISHRAQAIASVASRWHAMMSCS 350

Query: 328 TLDSFDVTDGETPMAAAAPTDGNLMFPVTPRGDEESEGEEGCDEEDELDNTKLIPAYAYS 387
           + DS  +    + +   A T+  + FP++ R D +    E  D    +  T   P+Y  S
Sbjct: 351 STDSTQIRASPSGVHLEATTNPPISFPIS-RSDSD---VESMDHYMRMPVTNQFPSY-MS 410

Query: 388 TISFQKRQALVTYFENNRAGITIYGFTLDRTTLHTIFGIELSLVLWLLGKTIGF 438
             S+ KRQA V Y + N  GITI+G+T+DR  ++TIF IELSLV ++LGKT+ F
Sbjct: 411 MSSYHKRQAFVLYLQMNPGGITIFGWTVDRHLINTIFFIELSLVTFVLGKTVVF 453

[Close]

BLAST of CmoCh01G011620 vs. NCBI nr
Match: gi|449466580|ref|XP_004151004.1| (PREDICTED: uncharacterized protein LOC101212672 [Cucumis sativus])

HSP 1 Score: 756.5 bits (1952), Expect = 2.5e-215
Identity = 396/439 (90.21%), Postives = 413/439 (94.08%), Query Frame = 1


Query: 1   MGDTSREALISRKAKVFNRSASHAQDELHSFRSYLRWMCVDQSDIWSAGLSWSVFFLFAI 60
           MGD++REALISRK+ VF RS SHA DELHSFRSYLRWMCVDQSDIW+AGLSWS+FFLFAI
Sbjct: 1   MGDSNREALISRKSSVFKRSVSHAHDELHSFRSYLRWMCVDQSDIWTAGLSWSMFFLFAI 60

Query: 61  VVPATSHFHLACSSCDSHHARPFDRVVQLSLSSVATVSFLCLSNFIRRYGLRRFLFFDRL 120
           +VPATSHF LACSSCDS+HARPFDRVVQLSLSSVATVSFLCLS+FIRRYGLRRFLFFD+L
Sbjct: 61  IVPATSHFVLACSSCDSNHARPFDRVVQLSLSSVATVSFLCLSSFIRRYGLRRFLFFDKL 120

Query: 121 CDESETVRRGYTNKFNRSLRVLSAFVVPCFAAESAYKIWWYASGASQIPFLGNVIVSDAV 180
           CDESETVRRGYT KFNRSLRVLS FV+PCFAAESAYKIWWYASGASQIPFLGNVIVSDAV
Sbjct: 121 CDESETVRRGYTIKFNRSLRVLSTFVIPCFAAESAYKIWWYASGASQIPFLGNVIVSDAV 180

Query: 181 ACSMELLSWLYRTTVIFLVCILFRLICDLQILRLQDFATVFQVDSDVGSVLSEHLRIRRH 240
           AC+MELLSWLYRTTVIFLVCILFRLICDLQILRLQDFATVFQVDSDV SVLSEHLRIRRH
Sbjct: 181 ACAMELLSWLYRTTVIFLVCILFRLICDLQILRLQDFATVFQVDSDVASVLSEHLRIRRH 240

Query: 241 LRIISHRYRAFILWSLILVTGSQFTSLLMTTKSSS-LNIYIAGELALCSMTLLTSLMILL 300
           LRIISHRYR FIL SL+LVTGSQFTSLL+TTKSSS LNIYIAGELALCSMTLLTSLMILL
Sbjct: 241 LRIISHRYRVFILGSLVLVTGSQFTSLLITTKSSSNLNIYIAGELALCSMTLLTSLMILL 300

Query: 301 RSATKITHKAQSVTALAAKWHVCATLDSFDVTDGETPMAAAAPTDGNLMFPVTPRGDEES 360
           RSATKITHKAQSVTALAAKWHVCATLDSFDVTDGETPMA+      +  FP      EES
Sbjct: 301 RSATKITHKAQSVTALAAKWHVCATLDSFDVTDGETPMASTI----HQAFPPHHGVGEES 360

Query: 361 EGEEGCDEEDELDNTKLIPAYAYSTISFQKRQALVTYFENNRAGITIYGFTLDRTTLHTI 420
           EG+EGCD ED+LDNTKLIPAYAYSTISFQKRQALVTYFENNRAGITIYGFTLDRTTLHTI
Sbjct: 361 EGDEGCD-EDDLDNTKLIPAYAYSTISFQKRQALVTYFENNRAGITIYGFTLDRTTLHTI 420

Query: 421 FGIELSLVLWLLGKTIGFS 439
           FGIELSLVLWLLGKTIGFS
Sbjct: 421 FGIELSLVLWLLGKTIGFS 434

[Close]

BLAST of CmoCh01G011620 vs. NCBI nr
Match: gi|659093777|ref|XP_008447712.1| (PREDICTED: uncharacterized protein LOC103490125 [Cucumis melo])

HSP 1 Score: 751.5 bits (1939), Expect = 8.2e-214
Identity = 393/439 (89.52%), Postives = 410/439 (93.39%), Query Frame = 1


Query: 1   MGDTSREALISRKAKVFNRSASHAQDELHSFRSYLRWMCVDQSDIWSAGLSWSVFFLFAI 60
           MGD++REALI+RK+ VF RS SHA DELHSFRSYLRWMCVDQSDIW+AGLSWS+FFLFAI
Sbjct: 1   MGDSNREALINRKSSVFKRSVSHAHDELHSFRSYLRWMCVDQSDIWTAGLSWSMFFLFAI 60

Query: 61  VVPATSHFHLACSSCDSHHARPFDRVVQLSLSSVATVSFLCLSNFIRRYGLRRFLFFDRL 120
           +VPATSHF LACSSCDS+HARPFDRVVQLSLSSVATVSFLCLS+FIRRYGLRRFLFFD+L
Sbjct: 61  IVPATSHFLLACSSCDSNHARPFDRVVQLSLSSVATVSFLCLSSFIRRYGLRRFLFFDKL 120

Query: 121 CDESETVRRGYTNKFNRSLRVLSAFVVPCFAAESAYKIWWYASGASQIPFLGNVIVSDAV 180
           CDESETVRRGYT K NRSLRVLS FV+PCFAAESAYKIWWYASGASQIPFLGNVIVSD V
Sbjct: 121 CDESETVRRGYTIKLNRSLRVLSTFVIPCFAAESAYKIWWYASGASQIPFLGNVIVSDVV 180

Query: 181 ACSMELLSWLYRTTVIFLVCILFRLICDLQILRLQDFATVFQVDSDVGSVLSEHLRIRRH 240
           AC MELLSWLYRTTVIFLVCILFRLICDLQILRLQDFATVFQVDSDV SVLSEHLRIRRH
Sbjct: 181 ACCMELLSWLYRTTVIFLVCILFRLICDLQILRLQDFATVFQVDSDVASVLSEHLRIRRH 240

Query: 241 LRIISHRYRAFILWSLILVTGSQFTSLLMTTKSSS-LNIYIAGELALCSMTLLTSLMILL 300
           LRIISHRYR FIL SL+LVTGSQFTSLL+TTKSSS LNIYIAGELALCSMTLLTSLMILL
Sbjct: 241 LRIISHRYRVFILGSLVLVTGSQFTSLLITTKSSSNLNIYIAGELALCSMTLLTSLMILL 300

Query: 301 RSATKITHKAQSVTALAAKWHVCATLDSFDVTDGETPMAAAAPTDGNLMFPVTPRGDEES 360
           RSATKITHKAQSVTALAAKWHVCATLDSFDVTDGETPMA+      +  FP      EES
Sbjct: 301 RSATKITHKAQSVTALAAKWHVCATLDSFDVTDGETPMASTI----HQAFPTHHGVGEES 360

Query: 361 EGEEGCDEEDELDNTKLIPAYAYSTISFQKRQALVTYFENNRAGITIYGFTLDRTTLHTI 420
           EG+EGCD ED+LDNTKLIPAYAYSTISFQKRQALVTYFENNRAGITIYGFTLDRTTLHTI
Sbjct: 361 EGDEGCD-EDDLDNTKLIPAYAYSTISFQKRQALVTYFENNRAGITIYGFTLDRTTLHTI 420

Query: 421 FGIELSLVLWLLGKTIGFS 439
           FGIELSLVLWLLGKTIGFS
Sbjct: 421 FGIELSLVLWLLGKTIGFS 434

[Close]

BLAST of CmoCh01G011620 vs. NCBI nr
Match: gi|590606354|ref|XP_007020713.1| (F11F12.5 protein [Theobroma cacao])

HSP 1 Score: 651.0 bits (1678), Expect = 1.5e-183
Identity = 337/439 (76.77%), Postives = 381/439 (86.79%), Query Frame = 1


Query: 1   MGDTSREALISRKAKVFNRSASHAQDELHSFRSYLRWMCVDQSDIWSAGLSWSVFFLFAI 60
           MGD +RE L+ R    F R+ SHA DEL SFR+YLRWMCVDQSD+W+A LSW VF L  +
Sbjct: 1   MGD-NREPLVDRTR--FMRTISHAHDELQSFRTYLRWMCVDQSDVWTACLSWFVFILLGL 60

Query: 61  VVPATSHFHLACSSCDSHHARPFDRVVQLSLSSVATVSFLCLSNFIRRYGLRRFLFFDRL 120
           VVPA SHF LACS+CD+ HARP+D VVQLSLSSVA++SF+CL+ F+++YGLRRFLFFD+L
Sbjct: 61  VVPAMSHFLLACSTCDARHARPYDWVVQLSLSSVASLSFVCLTRFVKKYGLRRFLFFDKL 120

Query: 121 CDESETVRRGYTNKFNRSLRVLSAFVVPCFAAESAYKIWWYASGASQIPFLGNVIVSDAV 180
           CDESETVR+GYT + NRSL+++S FV+PCF AESAYK+WWYASGASQIPFLG V +SDA+
Sbjct: 121 CDESETVRKGYTGQLNRSLKIVSIFVLPCFVAESAYKVWWYASGASQIPFLGIVWLSDAM 180

Query: 181 ACSMELLSWLYRTTVIFLVCILFRLICDLQILRLQDFATVFQVDSDVGSVLSEHLRIRRH 240
           AC MEL SWLYRTTV FLVC+LFRLIC+LQ+LR+QDFA VFQVDSDVGSVLSEHLRIRRH
Sbjct: 181 ACMMELCSWLYRTTVFFLVCVLFRLICNLQVLRIQDFAQVFQVDSDVGSVLSEHLRIRRH 240

Query: 241 LRIISHRYRAFILWSLILVTGSQFTSLLMTTKSSS-LNIYIAGELALCSMTLLTSLMILL 300
           LRIISHRYRAFILW LILVTGSQFTSLL+TTK+++ LNIY AGELA+CS+TLLT L ILL
Sbjct: 241 LRIISHRYRAFILWCLILVTGSQFTSLLITTKANAELNIYKAGELAMCSITLLTGLSILL 300

Query: 301 RSATKITHKAQSVTALAAKWHVCATLDSFDVTDGETPMAAAAPTDGNLMFPVTPRGDEES 360
           RSATKITHKAQSVT LAAKWHVCATLDSFD  DGETP   A    G   FP     D ES
Sbjct: 301 RSATKITHKAQSVTCLAAKWHVCATLDSFDANDGETPRIPAI--HGCQSFPYVGT-DGES 360

Query: 361 EGEEGCDEEDELDNTKLIPAYAYSTISFQKRQALVTYFENNRAGITIYGFTLDRTTLHTI 420
           +GE+  DEED++DN+KLIPAYAYSTIS+QKRQALVTYFENNRAGITIYGFTLDR+TLHTI
Sbjct: 361 DGEDAGDEEDDIDNSKLIPAYAYSTISYQKRQALVTYFENNRAGITIYGFTLDRSTLHTI 420

Query: 421 FGIELSLVLWLLGKTIGFS 439
           FGIELSLVLWLLGKTIG S
Sbjct: 421 FGIELSLVLWLLGKTIGIS 433

[Close]

BLAST of CmoCh01G011620 vs. NCBI nr
Match: gi|1000942927|ref|XP_015582109.1| (PREDICTED: uncharacterized protein LOC8269016 [Ricinus communis])

HSP 1 Score: 637.9 bits (1644), Expect = 1.3e-179
Identity = 324/433 (74.83%), Postives = 373/433 (86.14%), Query Frame = 1


Query: 7   EALISRKAKVFNRSASHAQDELHSFRSYLRWMCVDQSDIWSAGLSWSVFFLFAIVVPATS 66
           + L+ RK+  F RS SHA DEL SFRSYLRWMCVDQS+IW   LSW +F LFA+VVPA S
Sbjct: 10  DPLLGRKSSKFTRSVSHAYDELQSFRSYLRWMCVDQSNIWVTCLSWFMFILFAVVVPAIS 69

Query: 67  HFHLACSSCDSHHARPFDRVVQLSLSSVATVSFLCLSNFIRRYGLRRFLFFDRLCDESET 126
           HF LACS+CDS H RP+D VVQLSLSSVAT+SF+CLS FIR+YGLRRFLF D+LCDESET
Sbjct: 70  HFVLACSTCDSKHKRPYDSVVQLSLSSVATLSFVCLSKFIRKYGLRRFLFLDKLCDESET 129

Query: 127 VRRGYTNKFNRSLRVLSAFVVPCFAAESAYKIWWYASGASQIPFLGNVIVSDAVACSMEL 186
           VR+GYT++ N SL++LS FV+PCF AESAYKIWWYASGASQIPFLGNVI+SD VAC MEL
Sbjct: 130 VRKGYTDQLNWSLKLLSIFVLPCFVAESAYKIWWYASGASQIPFLGNVILSDTVACIMEL 189

Query: 187 LSWLYRTTVIFLVCILFRLICDLQILRLQDFATVFQVDSDVGSVLSEHLRIRRHLRIISH 246
            SWLYRTT+IFLVC+LF LIC LQILRLQDFA VFQVDSDV SVLSEHLRI+RHLRIISH
Sbjct: 190 CSWLYRTTIIFLVCVLFHLICHLQILRLQDFAQVFQVDSDVESVLSEHLRIKRHLRIISH 249

Query: 247 RYRAFILWSLILVTGSQFTSLLMTTKSSS-LNIYIAGELALCSMTLLTSLMILLRSATKI 306
           RYRAF+LW+LIL TGSQF SLL+TTKS + +++Y AGELALCS+TL+T L+I+LRSATKI
Sbjct: 250 RYRAFVLWALILATGSQFASLLITTKSGAVVDVYRAGELALCSITLVTGLLIILRSATKI 309

Query: 307 THKAQSVTALAAKWHVCATLDSFDVTDGETPMAAAAPTDGNLMFPVTPRGDEESEGEEGC 366
           THKAQSVT+LAAKWH+CATLD+FD T+GETP     PT   +         ++ EG++  
Sbjct: 310 THKAQSVTSLAAKWHICATLDTFDSTEGETP---RTPTANGI--------TDDEEGDDAG 369

Query: 367 DEEDELDNTKLIPAYAYSTISFQKRQALVTYFENNRAGITIYGFTLDRTTLHTIFGIELS 426
           DEEDELDN+KLIPAYAYSTISFQKRQALV YFENNRAGIT+YGFTLDR+TLH+IFG+EL+
Sbjct: 370 DEEDELDNSKLIPAYAYSTISFQKRQALVNYFENNRAGITVYGFTLDRSTLHSIFGVELA 429

Query: 427 LVLWLLGKTIGFS 439
           LVLWLLGKT+G S
Sbjct: 430 LVLWLLGKTVGIS 431

[Close]

BLAST of CmoCh01G011620 vs. NCBI nr
Match: gi|297834964|ref|XP_002885364.1| (extracellular ligand-gated ion channel [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 636.7 bits (1641), Expect = 2.9e-179
Identity = 331/438 (75.57%), Postives = 374/438 (85.39%), Query Frame = 1


Query: 2   GDTSREALISRKAKVFNRSASHAQDELHSFRSYLRWMCVDQSDIWSAGLSWSVFFLFAIV 61
           G  +RE LI+R+ K F RS SHAQDEL SFR YLRWMCVDQS  W+A LSWS+F +F +V
Sbjct: 17  GRGTRERLINRETK-FTRSVSHAQDELQSFRKYLRWMCVDQSSPWTAVLSWSMFVVFTLV 76

Query: 62  VPATSHFHLACSSCDSHHARPFDRVVQLSLSSVATVSFLCLSNFIRRYGLRRFLFFDRLC 121
           VPATSHF LAC+ CDSHH+RP+D VVQLSLSS A +SFLCLS F+ +YGLRRFLFFD+L 
Sbjct: 77  VPATSHFMLACADCDSHHSRPYDSVVQLSLSSFAALSFLCLSRFVSKYGLRRFLFFDKLW 136

Query: 122 DESETVRRGYTNKFNRSLRVLSAFVVPCFAAESAYKIWWYASGASQIPFLGNVIVSDAVA 181
           DESETVRRGYTN+ NRSL++LS FV PCF A S+YKIWWYASGASQIPFLGNVI+SD VA
Sbjct: 137 DESETVRRGYTNQLNRSLKILSYFVTPCFLAMSSYKIWWYASGASQIPFLGNVILSDTVA 196

Query: 182 CSMELLSWLYRTTVIFLVCILFRLICDLQILRLQDFATVFQVDSDVGSVLSEHLRIRRHL 241
           C MEL SWLYRTTVIFLVC+LFRLIC LQILRLQDFA VFQ+DSDVGS+LSEHLRIRRHL
Sbjct: 197 CLMELCSWLYRTTVIFLVCVLFRLICHLQILRLQDFAQVFQMDSDVGSILSEHLRIRRHL 256

Query: 242 RIISHRYRAFILWSLILVTGSQFTSLLMTTKS-SSLNIYIAGELALCSMTLLTSLMILLR 301
           RIISHRYR FIL SLILVTGSQF SLL+TTK+ + LNIY AGELALCSMTL+T+L+ILLR
Sbjct: 257 RIISHRYRTFILLSLILVTGSQFYSLLITTKAYAELNIYRAGELALCSMTLVTALLILLR 316

Query: 302 SATKITHKAQSVTALAAKWHVCATLDSFDVTDGETPMAAAAPTDGNLMFPVTPRGDEESE 361
           SA+KITHKAQ+VT LAAKWHVCAT++SF+  DGETP        G+  +P T   + ES+
Sbjct: 317 SASKITHKAQAVTCLAAKWHVCATIESFETVDGETPRLVDR-ASGHGYYP-TDDDNGESD 376

Query: 362 GEEGCDEEDELDNTKLIPAYAYSTISFQKRQALVTYFENNRAGITIYGFTLDRTTLHTIF 421
            E+  DEED+ DN  LIPAYAYSTISFQKRQALV YFENNRAGIT++GFTLDR+TLHTIF
Sbjct: 377 SEDYGDEEDDFDNNNLIPAYAYSTISFQKRQALVNYFENNRAGITVFGFTLDRSTLHTIF 436

Query: 422 GIELSLVLWLLGKTIGFS 439
           GIE+SLVLWLLGKTIG S
Sbjct: 437 GIEMSLVLWLLGKTIGIS 451

The following BLAST results are available for this feature:

BLAST of CmoCh01G011620 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh01G011620 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K352_CUCSA	1.8e-215	90.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G179620 PE=4 SV=1	[more]
A0A061F5U3_THECC	1.0e-183	76.77	F11F12.5 protein OS=Theobroma cacao GN=TCM_030801 PE=4 SV=1	[more]
D7LAY2_ARALL	2.0e-179	75.57	Extracellular ligand-gated ion channel OS=Arabidopsis lyrata subsp. lyrata GN=AR...	[more]
B9GJ40_POPTR	2.7e-179	75.06	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s36620g PE=4 SV=1	[more]
A0A0D2QY93_GOSRA	6.0e-179	74.03	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G443500 PE=4 SV=1	[more]

BLAST of CmoCh01G011620 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G20300.1	3.9e-182	75.86	Protein of unknown function (DUF3537)	[more]
AT1G50630.1	2.0e-173	72.45	Protein of unknown function (DUF3537)	[more]
AT4G22270.1	7.3e-120	55.24	Protein of unknown function (DUF3537)	[more]
AT4G03820.2	3.5e-106	51.70	Protein of unknown function (DUF3537)	[more]
AT1G67570.1	3.2e-59	34.06	Protein of unknown function (DUF3537)	[more]

BLAST of CmoCh01G011620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449466580\|ref\|XP_004151004.1\|	2.5e-215	90.21	PREDICTED: uncharacterized protein LOC101212672 [Cucumis sativus]	[more]
gi\|659093777\|ref\|XP_008447712.1\|	8.2e-214	89.52	PREDICTED: uncharacterized protein LOC103490125 [Cucumis melo]	[more]
gi\|590606354\|ref\|XP_007020713.1\|	1.5e-183	76.77	F11F12.5 protein [Theobroma cacao]	[more]
gi\|1000942927\|ref\|XP_015582109.1\|	1.3e-179	74.83	PREDICTED: uncharacterized protein LOC8269016 [Ricinus communis]	[more]
gi\|297834964\|ref\|XP_002885364.1\|	2.9e-179	75.57	extracellular ligand-gated ion channel [Arabidopsis lyrata subsp. lyrata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021924	DUF3537

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042538	hyperosmotic salinity response
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009409	response to cold
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G011620.1	CmoCh01G011620.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021924	Protein of unknown function DUF3537	PFAM	PF12056	DUF3537	coord: 26..422 score: 6.5E
None	No IPR available	PANTHER	PTHR31963	FAMILY NOT NAMED	coord: 3..438 score: 6.0E
None	No IPR available	PANTHER	PTHR31963:SF4	F11F12.5 PROTEIN	coord: 3..438 score: 6.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G011620	CmaCh01G011160	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G011620	Cla016304	Watermelon (97103) v1	cmowmB406
CmoCh01G011620	MELO3C013132	Melon (DHL92) v3.5.1	cmomeB386
CmoCh01G011620	ClCG09G011030	Watermelon (Charleston Gray)	cmowcgB380
CmoCh01G011620	Cp4.1LG02g00810	Cucurbita pepo (Zucchini)	cmocpeB448
CmoCh01G011620	MELO3C013132.2	Melon (DHL92) v3.6.1	cmomedB443
CmoCh01G011620	CsaV3_7G021170	Cucumber (Chinese Long) v3	cmocucB0575
CmoCh01G011620	Cla97C09G173740	Watermelon (97103) v2	cmowmbB499
CmoCh01G011620	Bhi09G001407	Wax gourd	cmowgoB0616
CmoCh01G011620	CsGy7G008770	Cucumber (Gy14) v2	cgybcmoB913
CmoCh01G011620	Carg22376	Silver-seed gourd	carcmoB1194

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G011620	Cucurbita pepo (Zucchini)	cmocpeB464
CmoCh01G011620	Bottle gourd (USVL1VR-Ls)	cmolsiB395
CmoCh01G011620	Silver-seed gourd	carcmoB1215
CmoCh01G011620	Cucurbita moschata (Rifu)	cmocmoB018
CmoCh01G011620	Cucurbita maxima (Rimu)	cmacmoB048