CmoCh01G010440 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh01G010440
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionGenomic DNA, chromosome 3, P1 clone: MPN9
LocationCmo_Chr01 : 8232902 .. 8236406 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACGTAGGTGTACAAGATTTTGTTCCTTTTCCCATTTGAATTCTCTTCCCACATATTTGGGCCACTCATTTCTTCGCAAGAAATAGAAAAGCATGCGTGTGGGTCTACAATTGCAAACCAAACAAGTGGTTCAAATTTATCTCCAACTGAAGCGATTAAACAAATTCGAAACCACATCCTTTAATAATCCTCACTCAGATTCTTCTTTCTCTGCTTCCGATTCGGCTCTCAATCCTCCGATTATCCTCAAGGTATGTTTATGTACAATTTTTCCGTTCAAACCAACGGCGATGTTCTACTCCTCTACTTTCCGATTTCAGTTGCCCTAATTTCTCCAGTCAAACCGATTCACTGTTCTTGCAGATTATGACGAGCGTAACGTTCGGTCACCAGAGTAATTGGTCGCCCGGGATTGGGATTCAGGAGCATCTAGGTAGAGCAAAGATTTCTAGAGTTGCGCATTCATATTCGGAGTATTGTTGTCCATTTCTTCCTTCCAGAGAAACAAGCACTCACCATGGGAATCATGTTGCTTACTGTCGCCGACGAACTGGACGGCAAATTAGACCTGTTCTTGCAGGTTCCGTCGACGGTGCCATGGATCCTGATGAGTCCGATCGTGAGATTAACGACAGTGAGAGTCCCAAACCTGAAAATGGAGGGGTTAGTACTCAATCCCACATAGTTTGGATTCAAAAGAAAGAAAAAAACTCAATTATAGACTACTACTTGAGACTTGCATGAAGTTGAAATCAGAAATTATAGACCTTTAGATTTGGATTCTAATAAATTTTATAGTAATCACGAGTGTGTAGTACGTTGATAAGTGATATGTCTGATGACTTGCAAGAGAAAATAAATTGACTTAAAATGTAATTTTGCACCATCATGGCATCATTTCTTCTTGTGGAGACTCATTTTAGTAATTTATGTTCTTTCAGATGAACTTCGAAATGCTTAGGGAAAACTTGGAAAGATCGGTTGGGACGGATGATTCCAGGTTTAGTGGGATTGACTTAGCTACTATTATCAGAAATAAGTATGGCAAGTCTTACGATGTTCAACTGATAAAGAAGGTATTCATCTTCCATTACTAAACTTCTTACTATTCTTTGATTAAATTACAAATTCAAATGTAGGTTTGTGTTAAATAAGTTTTTGAATTTTAGACAGTTCAATGAGTCTTTAAACTTCTAAAATTATGTCTTATGGGTCATTAAACTGTAAAAAAACATATGATAAGTTCTTAAACTTTTATGGAAATGTCAATGAAAATGTCATTTCAGTAAAATGACGATATCAATGTCGATAGACTTTTCTTGAAACATAATAAAAACATAAACATCTAAAATTATTTAAATTAATAAACAAGTATTTTACAATGCTTATTATTTATTTTATATTACTGTTAGCGACATTTTTTTTCAGTGTATGTTCATCGATTTTTTCACGATGTAATGGAAATGTCGCTTTACCCTTTGTGTGGATATCGAACCCATGAATATGTAGAAATATCTACATGCCAATAGAAATTTAATACCCTGGTCATATAGTCACTATGGTCTGTTCACAATTCAAACTAAATTATGGATTTCTTTTCTTGTTTCTGTCATAATTCAGGAGTTCATGGGACGAAATCTTCTTGCTTTAAATGTCATGTGGAAATACAGAGAGCAGGTACGCAAGAATCCAGTCTTCTCTGCTACTTTTAGACTAAAATCTTTTATCAACTGAGATACTTTTCAAAATTAGGGGAACCTGTCTATGAATTATAACATCTGAAAGCTGATGAAGAGCATTTTCCTAAATGGACTATTAATTCTAACCTCACAATTGAACTAATCTGAATTATTAGGAAATTGGTAGGAAAATTTCGAGTACTATGGGAATAACATACTCCCTTTGTTCACACTATGGTTTTGTCTTTATAAATAATTTTTTTAATATTGGTGGCTCCCACATCGTTTTTAGAAGGATGCTGATATAATACGTAATACATGGTAGGAGTATCTATACTCTCATAGCAACCAATTTTTCTTAAAATTGACCTATCTACTGGAAGTTCCTTTAGATAATTGTAGCAAATAAAATTTTGGGAGAAAGGGAACCTCTGGATTTAAGAACTAGTAGCTGCTGCAAAAATTAATATGGACATTTTCAAAGCAATAAAAACCAAACGCAAGCTCTGATAAGATCACTAAAAGTTAAGAAGTCAATTAATGACTGATAATGAAGCCAAACATGACTTGCAAATAAATAATCTACAGAATAGAAGGGAAAGGCTATTTGAAAAATAACTATAAAATCAAACGTATTGATAAGAAAGGAGATATAAAGCTAGGCGATGAATAGCTGCATAGGCTATTTCTTTTTTCTTTTTTCTTTTTTAATGCTTTCTTCCTGCTCAACATATTTTGATGATCTTTTAACAATTAGTTATGGACTGTGCATGATGGCAAATGAGCTGTAGACAGAGCATAATTGCCTTCAAATTTGGAGAGACTATTTCTACTTTAAAATGTTGAATATTTGTCAATTTGGTAGAAATCATTTCCATTGTCCGAGGAAGAGTACCTATTGCGGCTTGATGGTGTGGCTAATACGTTAAAATGCTGGGGAGCCGTTGCCCATATTCGGAACAGCTTAGACAAAACTAAAGACAGGCCCCGGATAGGAAAGGTAAGATTACTGGGAAGTCGGCTCTCATATCCCCACTAGAATTATGAACAAAGGCTGATGGGCGACGACAGGGTTGAAGGGGAAAGTTTAGATAGGAAACGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGTACAAGGGTGTAGAATAGATTTCGATAGTCTGCTTCCTGACTAATCTAAGTAGAGTTGAATGGATAAAATAGCTACTATTATCTTAAAGGTGGATGATTTGATTCTTATACTCATAATTCTTGTGTTGAACACAATGAAACAAGGATCACTAATTGAGTTAAGCCGACCTAACAAACTTGAATGATGAAATTCACTTGGCTTGATTTTGATTACATTAGCTCGTTATTGTTTCTTTTGGTAGTGTTTTGATAGATTTATTGAAACTTTGCAGGCAGTCAGTATTTTTATCGACATGGATGAGTCTGGTGGCCGTGCCAATGAGTGGATATACAAGTAGATTACTTATACGAACAAAAGTCAAATGTATATTTATTATATTATTTTTTTTGTATAGGTAAAAGTCCAACAAATACACTTTTTATTTATTTAGACAACTTTAGTTCCTCTAGGATACATTTGTTACTAAATAGTAATGGTGGTTTGTATAAACATGTGACAATGAGGCGGTCTTTTTGATCCCTTCGAGGTGGATATATGGGTTAAGACATTTTTCTTTCTTTCATAGAAAACAAAAAGGGCTACAAAAGACAGCCTAAAGGCCCGGGTGAGAGGAAACTCCTATCCAAGAAAATCATGTGGTCTCTAGCCATTAGAAACATGAAAACACTGTGGCATCAAG

mRNA sequence

AACGTAGGTGTACAAGATTTTGTTCCTTTTCCCATTTGAATTCTCTTCCCACATATTTGGGCCACTCATTTCTTCGCAAGAAATAGAAAAGCATGCGTGTGGGTCTACAATTGCAAACCAAACAAGTGGTTCAAATTTATCTCCAACTGAAGCGATTAAACAAATTCGAAACCACATCCTTTAATAATCCTCACTCAGATTCTTCTTTCTCTGCTTCCGATTCGGCTCTCAATCCTCCGATTATCCTCAAGATTATGACGAGCGTAACGTTCGGTCACCAGAGTAATTGGTCGCCCGGGATTGGGATTCAGGAGCATCTAGGTAGAGCAAAGATTTCTAGAGTTGCGCATTCATATTCGGAGTATTGTTGTCCATTTCTTCCTTCCAGAGAAACAAGCACTCACCATGGGAATCATGTTGCTTACTGTCGCCGACGAACTGGACGGCAAATTAGACCTGTTCTTGCAGGTTCCGTCGACGGTGCCATGGATCCTGATGAGTCCGATCGTGAGATTAACGACAGTGAGAGTCCCAAACCTGAAAATGGAGGGATGAACTTCGAAATGCTTAGGGAAAACTTGGAAAGATCGGTTGGGACGGATGATTCCAGGTTTAGTGGGATTGACTTAGCTACTATTATCAGAAATAAGTATGGCAAGTCTTACGATGTTCAACTGATAAAGAAGGAGTTCATGGGACGAAATCTTCTTGCTTTAAATGTCATGTGGAAATACAGAGAGCAGAAATCATTTCCATTGTCCGAGGAAGAGTACCTATTGCGGCTTGATGGTGTGGCTAATACGTTAAAATGCTGGGGAGCCGTTGCCCATATTCGGAACAGCTTAGACAAAACTAAAGACAGGCCCCGGATAGGAAAGGCAGTCAGTATTTTTATCGACATGGATGAGTCTGGTGGCCGTGCCAATGAGTGGATATACAAGTAGATTACTTATACGAACAAAAGTCAAATGTATATTTATTATATTATTTTTTTTGTATAGGTAAAAGTCCAACAAATACACTTTTTATTTATTTAGACAACTTTAGTTCCTCTAGGATACATTTGTTACTAAATAGTAATGGTGGTTTGTATAAACATGTGACAATGAGGCGGTCTTTTTGATCCCTTCGAGGTGGATATATGGGTTAAGACATTTTTCTTTCTTTCATAGAAAACAAAAAGGGCTACAAAAGACAGCCTAAAGGCCCGGGTGAGAGGAAACTCCTATCCAAGAAAATCATGTGGTCTCTAGCCATTAGAAACATGAAAACACTGTGGCATCAAG

Coding sequence (CDS)

ATGCGTGTGGGTCTACAATTGCAAACCAAACAAGTGGTTCAAATTTATCTCCAACTGAAGCGATTAAACAAATTCGAAACCACATCCTTTAATAATCCTCACTCAGATTCTTCTTTCTCTGCTTCCGATTCGGCTCTCAATCCTCCGATTATCCTCAAGATTATGACGAGCGTAACGTTCGGTCACCAGAGTAATTGGTCGCCCGGGATTGGGATTCAGGAGCATCTAGGTAGAGCAAAGATTTCTAGAGTTGCGCATTCATATTCGGAGTATTGTTGTCCATTTCTTCCTTCCAGAGAAACAAGCACTCACCATGGGAATCATGTTGCTTACTGTCGCCGACGAACTGGACGGCAAATTAGACCTGTTCTTGCAGGTTCCGTCGACGGTGCCATGGATCCTGATGAGTCCGATCGTGAGATTAACGACAGTGAGAGTCCCAAACCTGAAAATGGAGGGATGAACTTCGAAATGCTTAGGGAAAACTTGGAAAGATCGGTTGGGACGGATGATTCCAGGTTTAGTGGGATTGACTTAGCTACTATTATCAGAAATAAGTATGGCAAGTCTTACGATGTTCAACTGATAAAGAAGGAGTTCATGGGACGAAATCTTCTTGCTTTAAATGTCATGTGGAAATACAGAGAGCAGAAATCATTTCCATTGTCCGAGGAAGAGTACCTATTGCGGCTTGATGGTGTGGCTAATACGTTAAAATGCTGGGGAGCCGTTGCCCATATTCGGAACAGCTTAGACAAAACTAAAGACAGGCCCCGGATAGGAAAGGCAGTCAGTATTTTTATCGACATGGATGAGTCTGGTGGCCGTGCCAATGAGTGGATATACAAGTAG
Homology
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BLAST of CmoCh01G010440 vs. TrEMBL
Match: A0A0A0KPN5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G289650 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.8e-75
Identity = 144/172 (83.72%), Postives = 151/172 (87.79%), Query Frame = 1 

Query: 53  KIMTSVTFGHQSNWSPGIGIQEHLGRAKISRVAHSYSEYCCPFLPSRETSTHHGNHVAYC 112
           KIMTSVTFGHQSNWSPGIGIQEHLGR KISRV       CCPFLPS    THHGNHVAYC
Sbjct: 30  KIMTSVTFGHQSNWSPGIGIQEHLGRTKISRVD------CCPFLPS----THHGNHVAYC 89

Query: 113 RRRTGRQIRPVLAGSVDGAMDPDESDREINDSESPKPENGGMNFEMLRENLERSVGTDDS 172
           RRRTGRQ+RPV AGS+DGAMDPD+ D  INDSESPK EN GMNFEMLRENLERSVGTDDS
Sbjct: 90  RRRTGRQLRPVFAGSIDGAMDPDDPDHRINDSESPKTENEGMNFEMLRENLERSVGTDDS 149

Query: 173 RFSGIDLATIIRNKYGKSYDVQLIKKEFMGRNLLALNVMWKYREQKSFPLSE 225
           RFSGIDLAT+IRNKYGKSYDVQLIKKEFMGRNLLALNVMWKYREQ++   +E
Sbjct: 150 RFSGIDLATLIRNKYGKSYDVQLIKKEFMGRNLLALNVMWKYREQENEHFTE 191

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BLAST of CmoCh01G010440 vs. TrEMBL
Match: F6HGH7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g01220 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 2.6e-74
Identity = 141/229 (61.57%), Postives = 177/229 (77.29%), Query Frame = 1 

Query: 55  MTSVTFGHQSNWSPGIGIQEHLGRAKISRVAHSYSEYCCPFLPSRETSTHHGNHVAYCRR 114
           MT ++  H + W   +GIQ H  R + +++    S    P++PSR +  +HG  +A    
Sbjct: 15  MTMLSGNHCNLW---LGIQNHPSRGRFNQIICPGSG---PYIPSRGSFFYHGQCLAGSSH 74

Query: 115 RTGRQIRPVLAGSVDGAMDPDESDREINDSESPKPENGGMNFEMLRENLERSVGTDDSRF 174
           ++ R+ RP+ + +VD  MDPD+S+  I+  +    E GG+N EM+RENLER VG+DDS F
Sbjct: 75  QSARRCRPIFSSTVDDGMDPDDSEDGIDKKQPSNGELGGVNSEMIRENLERIVGSDDSTF 134

Query: 175 SGIDLATIIRNKYGKSYDVQLIKKEFMGRNLLALNVMWKYREQKSFPLSEEEYLLRLDGV 234
           SG+DLAT+IRNKYG+SYDV LIKKEFMGRNLLALNVMWKY EQ+SFPL+EEEYLLRLD V
Sbjct: 135 SGLDLATLIRNKYGRSYDVLLIKKEFMGRNLLALNVMWKYMEQRSFPLTEEEYLLRLDDV 194

Query: 235 ANTLKCWGAVAHIRNSLDKTKDRPRIGKAVSIFIDMDESGGRANEWIYK 284
           ANTLKCWGA++HIRNSL+K K+RPRIGKAVSIFIDMDESGGR+NEWIYK
Sbjct: 195 ANTLKCWGAISHIRNSLEKLKERPRIGKAVSIFIDMDESGGRSNEWIYK 237

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BLAST of CmoCh01G010440 vs. TrEMBL
Match: V4TGM9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033522mg PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 4.4e-74
Identity = 148/231 (64.07%), Postives = 172/231 (74.46%), Query Frame = 1 

Query: 55  MTSVTFGHQSNWSPGIGIQEHLGRAKISRVAHSYSEYCCPFLPSRETSTHHGNHVAYCRR 114
           MTS+  GHQ NWS G+  + HL RA+ +++   YS Y     P +   + H  H++ C  
Sbjct: 1   MTSIIPGHQFNWSVGVE-EHHLHRARFNKII-PYSRYFGSNFPYKGLFSSHDKHISGCG- 60

Query: 115 RTGRQIRPVLAGSVDGAMDPDES--DREINDSESPKPENGGMNFEMLRENLERSVGTDDS 174
                  P+   +VD   DPD+   D   N  ESPK ENG +N E+LRENLER VG DDS
Sbjct: 61  -------PIFCSAVDDGNDPDDGSGDDTSNKKESPKDENG-VNSELLRENLERIVGVDDS 120

Query: 175 RFSGIDLATIIRNKYGKSYDVQLIKKEFMGRNLLALNVMWKYREQKSFPLSEEEYLLRLD 234
            FSG+DLAT+IRNKYG+SYDVQLIKKEFMGRNLLALNVMWKY EQ+SFPL+EEEY+LRLD
Sbjct: 121 TFSGLDLATLIRNKYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQRSFPLTEEEYILRLD 180

Query: 235 GVANTLKCWGAVAHIRNSLDKTKDRPRIGKAVSIFIDMDESGGRANEWIYK 284
            VANTLKCWGAV+HIRNSL K K+RPRIGKAVSIFIDMDESGGRANEWIYK
Sbjct: 181 DVANTLKCWGAVSHIRNSLAKLKERPRIGKAVSIFIDMDESGGRANEWIYK 220

[Close]
BLAST of CmoCh01G010440 vs. TrEMBL
Match: A0A067EP70_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027715mg PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.2e-73
Identity = 147/231 (63.64%), Postives = 171/231 (74.03%), Query Frame = 1 

Query: 55  MTSVTFGHQSNWSPGIGIQEHLGRAKISRVAHSYSEYCCPFLPSRETSTHHGNHVAYCRR 114
           MTS+  GHQ NWS G+  + HL RA+ +++   YS Y     P +   + H  H++ C  
Sbjct: 1   MTSIIPGHQFNWSVGVE-EHHLHRARFNKII-PYSRYFGSNFPYKGLFSSHDKHISGCG- 60

Query: 115 RTGRQIRPVLAGSVDGAMDPDES--DREINDSESPKPENGGMNFEMLRENLERSVGTDDS 174
                  P+   +VD   DPD+   D   N  ESPK ENG +N E+LRENLER VG DDS
Sbjct: 61  -------PIFCSAVDDGNDPDDGSGDDTSNKKESPKDENG-VNSELLRENLERIVGVDDS 120

Query: 175 RFSGIDLATIIRNKYGKSYDVQLIKKEFMGRNLLALNVMWKYREQKSFPLSEEEYLLRLD 234
            FSG+DLAT+IR KYG+SYDVQLIKKEFMGRNLLALNVMWKY EQ+SFPL+EEEY+LRLD
Sbjct: 121 TFSGLDLATLIRKKYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQRSFPLTEEEYILRLD 180

Query: 235 GVANTLKCWGAVAHIRNSLDKTKDRPRIGKAVSIFIDMDESGGRANEWIYK 284
            VANTLKCWGAV+HIRNSL K K+RPRIGKAVSIFIDMDESGGRANEWIYK
Sbjct: 181 DVANTLKCWGAVSHIRNSLAKLKERPRIGKAVSIFIDMDESGGRANEWIYK 220

[Close]
BLAST of CmoCh01G010440 vs. TrEMBL
Match: B9HY12_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s17680g PE=4 SV=2)

HSP 1 Score: 282.3 bits (721), Expect = 6.3e-73
Identity = 149/237 (62.87%), Postives = 177/237 (74.68%), Query Frame = 1 

Query: 55  MTSVTFGHQSNWS-PGIGIQEHLGRAKISRVAHSYSEYCCPF----LPSRET--STHHGN 114
           M+S+  GH  NWS  G G+QEH     + R     ++  CP     LP R    ST    
Sbjct: 115 MSSIVSGHHCNWSLGGAGVQEHF----LCRGRFYSNKVPCPGDNHGLPCRGLIFSTPQSL 174

Query: 115 HVAYCRRRTGRQIRPVLAGSVDGAMDPDESDRE-INDSESPKPENGGMNFEMLRENLERS 174
             + C R + R+ RPV + +VD   D D+ + +   D +S K E GG++ E+LRENLER 
Sbjct: 175 ASSSCYRPSTRKYRPVFSSTVDDPRDQDDPEEDGARDKDSSKGETGGIDSELLRENLERI 234

Query: 175 VGTDDSRFSGIDLATIIRNKYGKSYDVQLIKKEFMGRNLLALNVMWKYREQKSFPLSEEE 234
           VG+DDS FSGIDLAT+IRNKYG+SYDVQLIKKEFMGRNLLALNVMWKYREQ+SFPL+EEE
Sbjct: 235 VGSDDSAFSGIDLATLIRNKYGRSYDVQLIKKEFMGRNLLALNVMWKYREQRSFPLTEEE 294

Query: 235 YLLRLDGVANTLKCWGAVAHIRNSLDKTKDRPRIGKAVSIFIDMDESGGRANEWIYK 284
           Y+LRLD VANTLKCWGAV+HIRNSL+K+K+RPRIGKAVSIFIDMDESGGRANEWIYK
Sbjct: 295 YILRLDDVANTLKCWGAVSHIRNSLEKSKERPRIGKAVSIFIDMDESGGRANEWIYK 347

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BLAST of CmoCh01G010440 vs. TAIR10
Match: AT3G19900.1 (AT3G19900.1 unknown protein)

HSP 1 Score: 233.0 bits (593), Expect = 2.2e-61
Identity = 127/216 (58.80%), Postives = 152/216 (70.37%), Query Frame = 1 

Query: 72  IQEHLGRAKISRVAHSYSEYCCPFLPSRETSTHHGNHVAYCRR----RTGRQIRPVLAGS 131
           I E  G   IS+V  S S YC P    R   +H     + C +    +T R+    +   
Sbjct: 16  IHERSGIGTISKV--SCSRYCGPCFSGRLAFSH-----SLCLKTTYGKTDRRKFSRICSI 75

Query: 132 VDGAMDPDESDREINDSESPKPENGGMNFEMLRENLERSVGTDDSRFSGIDLATIIRNKY 191
           VD   + D SD E  +S   K +      +M R NLER VG+DDS F+G+DLAT+IR KY
Sbjct: 76  VDDEGNLDNSDDEEKESLDDKTKRQAN--DMNRANLERMVGSDDSAFNGLDLATLIRQKY 135

Query: 192 GKSYDVQLIKKEFMGRNLLALNVMWKYREQKSFPLSEEEYLLRLDGVANTLKCWGAVAHI 251
           GKSYDVQLIKKEFMG+NLLA+NVMWKYREQ+SFPL+EEEY+LRLD VAN LKCWGAV+HI
Sbjct: 136 GKSYDVQLIKKEFMGKNLLAMNVMWKYREQRSFPLTEEEYILRLDDVANMLKCWGAVSHI 195

Query: 252 RNSLDKTKDRPRIGKAVSIFIDMDESGGRANEWIYK 284
           R+SL K+K+RPRIGKAVSIFIDMD +GGRANEWIYK
Sbjct: 196 RSSLAKSKERPRIGKAVSIFIDMDSTGGRANEWIYK 222

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BLAST of CmoCh01G010440 vs. NCBI nr
Match: gi|659113943|ref|XP_008456834.1| (PREDICTED: uncharacterized protein LOC103496669 [Cucumis melo])

HSP 1 Score: 426.8 bits (1096), Expect = 3.0e-116
Identity = 209/229 (91.27%), Postives = 213/229 (93.01%), Query Frame = 1 

Query: 55  MTSVTFGHQSNWSPGIGIQEHLGRAKISRVAHSYSEYCCPFLPSRETSTHHGNHVAYCRR 114
           MTSVTFGHQSNWSPGIGIQEH GR KISRV       CCPFLPS    THHGNHVAYCRR
Sbjct: 1   MTSVTFGHQSNWSPGIGIQEHRGRTKISRVD------CCPFLPS----THHGNHVAYCRR 60

Query: 115 RTGRQIRPVLAGSVDGAMDPDESDREINDSESPKPENGGMNFEMLRENLERSVGTDDSRF 174
           RTGRQ+RPVLAGS+DGAMDPD+ DR INDSESPK ENGGMNFEMLRENLERSVGTDDSRF
Sbjct: 61  RTGRQLRPVLAGSIDGAMDPDDPDRRINDSESPKTENGGMNFEMLRENLERSVGTDDSRF 120

Query: 175 SGIDLATIIRNKYGKSYDVQLIKKEFMGRNLLALNVMWKYREQKSFPLSEEEYLLRLDGV 234
           SGIDLAT+IRNKYGKSYDVQLIKKEFMGRNLLALNVMWKYREQKSFPLSEEEYLLRLDGV
Sbjct: 121 SGIDLATLIRNKYGKSYDVQLIKKEFMGRNLLALNVMWKYREQKSFPLSEEEYLLRLDGV 180

Query: 235 ANTLKCWGAVAHIRNSLDKTKDRPRIGKAVSIFIDMDESGGRANEWIYK 284
           ANTLKCWGAVAHIRNSLDKTKDRPRIGKAVSIFIDMDESGGRANEWIYK
Sbjct: 181 ANTLKCWGAVAHIRNSLDKTKDRPRIGKAVSIFIDMDESGGRANEWIYK 219

[Close]
BLAST of CmoCh01G010440 vs. NCBI nr
Match: gi|449445336|ref|XP_004140429.1| (PREDICTED: uncharacterized protein LOC101207332 [Cucumis sativus])

HSP 1 Score: 426.4 bits (1095), Expect = 3.9e-116
Identity = 209/231 (90.48%), Postives = 213/231 (92.21%), Query Frame = 1 

Query: 53  KIMTSVTFGHQSNWSPGIGIQEHLGRAKISRVAHSYSEYCCPFLPSRETSTHHGNHVAYC 112
           KIMTSVTFGHQSNWSPGIGIQEHLGR KISRV       CCPFLPS    THHGNHVAYC
Sbjct: 30  KIMTSVTFGHQSNWSPGIGIQEHLGRTKISRVD------CCPFLPS----THHGNHVAYC 89

Query: 113 RRRTGRQIRPVLAGSVDGAMDPDESDREINDSESPKPENGGMNFEMLRENLERSVGTDDS 172
           RRRTGRQ+RPV AGS+DGAMDPD+ D  INDSESPK EN GMNFEMLRENLERSVGTDDS
Sbjct: 90  RRRTGRQLRPVFAGSIDGAMDPDDPDHRINDSESPKTENEGMNFEMLRENLERSVGTDDS 149

Query: 173 RFSGIDLATIIRNKYGKSYDVQLIKKEFMGRNLLALNVMWKYREQKSFPLSEEEYLLRLD 232
           RFSGIDLAT+IRNKYGKSYDVQLIKKEFMGRNLLALNVMWKYREQKSFPLSEEEYLLRLD
Sbjct: 150 RFSGIDLATLIRNKYGKSYDVQLIKKEFMGRNLLALNVMWKYREQKSFPLSEEEYLLRLD 209

Query: 233 GVANTLKCWGAVAHIRNSLDKTKDRPRIGKAVSIFIDMDESGGRANEWIYK 284
           GVANTLKCWGAVAHIRNSLDKTKDRPRIGKAVSIFIDMDESGGRANEWIYK
Sbjct: 210 GVANTLKCWGAVAHIRNSLDKTKDRPRIGKAVSIFIDMDESGGRANEWIYK 250

[Close]
BLAST of CmoCh01G010440 vs. NCBI nr
Match: gi|700195677|gb|KGN50854.1| (hypothetical protein Csa_5G289650 [Cucumis sativus])

HSP 1 Score: 290.8 bits (743), Expect = 2.6e-75
Identity = 144/172 (83.72%), Postives = 151/172 (87.79%), Query Frame = 1 

Query: 53  KIMTSVTFGHQSNWSPGIGIQEHLGRAKISRVAHSYSEYCCPFLPSRETSTHHGNHVAYC 112
           KIMTSVTFGHQSNWSPGIGIQEHLGR KISRV       CCPFLPS    THHGNHVAYC
Sbjct: 30  KIMTSVTFGHQSNWSPGIGIQEHLGRTKISRVD------CCPFLPS----THHGNHVAYC 89

Query: 113 RRRTGRQIRPVLAGSVDGAMDPDESDREINDSESPKPENGGMNFEMLRENLERSVGTDDS 172
           RRRTGRQ+RPV AGS+DGAMDPD+ D  INDSESPK EN GMNFEMLRENLERSVGTDDS
Sbjct: 90  RRRTGRQLRPVFAGSIDGAMDPDDPDHRINDSESPKTENEGMNFEMLRENLERSVGTDDS 149

Query: 173 RFSGIDLATIIRNKYGKSYDVQLIKKEFMGRNLLALNVMWKYREQKSFPLSE 225
           RFSGIDLAT+IRNKYGKSYDVQLIKKEFMGRNLLALNVMWKYREQ++   +E
Sbjct: 150 RFSGIDLATLIRNKYGKSYDVQLIKKEFMGRNLLALNVMWKYREQENEHFTE 191

[Close]
BLAST of CmoCh01G010440 vs. NCBI nr
Match: gi|225425067|ref|XP_002271912.1| (PREDICTED: uncharacterized protein LOC100247903 isoform X3 [Vitis vinifera])

HSP 1 Score: 287.0 bits (733), Expect = 3.7e-74
Identity = 141/229 (61.57%), Postives = 177/229 (77.29%), Query Frame = 1 

Query: 55  MTSVTFGHQSNWSPGIGIQEHLGRAKISRVAHSYSEYCCPFLPSRETSTHHGNHVAYCRR 114
           MT ++  H + W   +GIQ H  R + +++    S    P++PSR +  +HG  +A    
Sbjct: 1   MTMLSGNHCNLW---LGIQNHPSRGRFNQIICPGSG---PYIPSRGSFFYHGQCLAGSSH 60

Query: 115 RTGRQIRPVLAGSVDGAMDPDESDREINDSESPKPENGGMNFEMLRENLERSVGTDDSRF 174
           ++ R+ RP+ + +VD  MDPD+S+  I+  +    E GG+N EM+RENLER VG+DDS F
Sbjct: 61  QSARRCRPIFSSTVDDGMDPDDSEDGIDKKQPSNGELGGVNSEMIRENLERIVGSDDSTF 120

Query: 175 SGIDLATIIRNKYGKSYDVQLIKKEFMGRNLLALNVMWKYREQKSFPLSEEEYLLRLDGV 234
           SG+DLAT+IRNKYG+SYDV LIKKEFMGRNLLALNVMWKY EQ+SFPL+EEEYLLRLD V
Sbjct: 121 SGLDLATLIRNKYGRSYDVLLIKKEFMGRNLLALNVMWKYMEQRSFPLTEEEYLLRLDDV 180

Query: 235 ANTLKCWGAVAHIRNSLDKTKDRPRIGKAVSIFIDMDESGGRANEWIYK 284
           ANTLKCWGA++HIRNSL+K K+RPRIGKAVSIFIDMDESGGR+NEWIYK
Sbjct: 181 ANTLKCWGAISHIRNSLEKLKERPRIGKAVSIFIDMDESGGRSNEWIYK 223

[Close]
BLAST of CmoCh01G010440 vs. NCBI nr
Match: gi|731375324|ref|XP_010654423.1| (PREDICTED: uncharacterized protein LOC100247903 isoform X2 [Vitis vinifera])

HSP 1 Score: 287.0 bits (733), Expect = 3.7e-74
Identity = 141/229 (61.57%), Postives = 177/229 (77.29%), Query Frame = 1 

Query: 55  MTSVTFGHQSNWSPGIGIQEHLGRAKISRVAHSYSEYCCPFLPSRETSTHHGNHVAYCRR 114
           MT ++  H + W   +GIQ H  R + +++    S    P++PSR +  +HG  +A    
Sbjct: 7   MTMLSGNHCNLW---LGIQNHPSRGRFNQIICPGSG---PYIPSRGSFFYHGQCLAGSSH 66

Query: 115 RTGRQIRPVLAGSVDGAMDPDESDREINDSESPKPENGGMNFEMLRENLERSVGTDDSRF 174
           ++ R+ RP+ + +VD  MDPD+S+  I+  +    E GG+N EM+RENLER VG+DDS F
Sbjct: 67  QSARRCRPIFSSTVDDGMDPDDSEDGIDKKQPSNGELGGVNSEMIRENLERIVGSDDSTF 126

Query: 175 SGIDLATIIRNKYGKSYDVQLIKKEFMGRNLLALNVMWKYREQKSFPLSEEEYLLRLDGV 234
           SG+DLAT+IRNKYG+SYDV LIKKEFMGRNLLALNVMWKY EQ+SFPL+EEEYLLRLD V
Sbjct: 127 SGLDLATLIRNKYGRSYDVLLIKKEFMGRNLLALNVMWKYMEQRSFPLTEEEYLLRLDDV 186

Query: 235 ANTLKCWGAVAHIRNSLDKTKDRPRIGKAVSIFIDMDESGGRANEWIYK 284
           ANTLKCWGA++HIRNSL+K K+RPRIGKAVSIFIDMDESGGR+NEWIYK
Sbjct: 187 ANTLKCWGAISHIRNSLEKLKERPRIGKAVSIFIDMDESGGRSNEWIYK 229

The following BLAST results are available for this feature:
BLAST of CmoCh01G010440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh01G010440 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPN5_CUCSA1.8e-7583.72Uncharacterized protein OS=Cucumis sativus GN=Csa_5G289650 PE=4 SV=1[more]
F6HGH7_VITVI2.6e-7461.57Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g01220 PE=4 SV=... [more]
V4TGM9_9ROSI4.4e-7464.07Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033522mg PE=4 SV=1[more]
A0A067EP70_CITSI2.2e-7363.64Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027715mg PE=4 SV=1[more]
B9HY12_POPTR6.3e-7362.87Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s17680g PE=4 SV=2[more]
BLAST of CmoCh01G010440 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G19900.12.2e-6158.80 unknown protein[more]
BLAST of CmoCh01G010440 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659113943|ref|XP_008456834.1|3.0e-11691.27PREDICTED: uncharacterized protein LOC103496669 [Cucumis melo][more]
gi|449445336|ref|XP_004140429.1|3.9e-11690.48PREDICTED: uncharacterized protein LOC101207332 [Cucumis sativus][more]
gi|700195677|gb|KGN50854.1|2.6e-7583.72hypothetical protein Csa_5G289650 [Cucumis sativus][more]
gi|225425067|ref|XP_002271912.1|3.7e-7461.57PREDICTED: uncharacterized protein LOC100247903 isoform X3 [Vitis vinifera][more]
gi|731375324|ref|XP_010654423.1|3.7e-7461.57PREDICTED: uncharacterized protein LOC100247903 isoform X2 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021420DUF3067
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G010440.1CmoCh01G010440.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021420Domain of unknown function DUF3067PFAMPF11267DUF3067coord: 178..281
score: 1.2
NoneNo IPR availablePANTHERPTHR35126FAMILY NOT NAMEDcoord: 26..283
score: 2.2E
NoneNo IPR availablePANTHERPTHR35126:SF1SUBFAMILY NOT NAMEDcoord: 26..283
score: 2.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh01G010440CmaCh01G010050Cucurbita maxima (Rimu)cmacmoB468
CmoCh01G010440Cp4.1LG02g08910Cucurbita pepo (Zucchini)cmocpeB448
CmoCh01G010440Carg25058Silver-seed gourdcarcmoB1361
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh01G010440Cucurbita pepo (Zucchini)cmocpeB464
CmoCh01G010440Bottle gourd (USVL1VR-Ls)cmolsiB397
CmoCh01G010440Cucumber (Gy14) v2cgybcmoB914
CmoCh01G010440Melon (DHL92) v3.6.1cmomedB448
CmoCh01G010440Silver-seed gourdcarcmoB0093
CmoCh01G010440Silver-seed gourdcarcmoB0822
CmoCh01G010440Cucumber (Chinese Long) v3cmocucB0574
CmoCh01G010440Watermelon (97103) v2cmowmbB498
CmoCh01G010440Wax gourdcmowgoB0621
CmoCh01G010440Cucurbita moschata (Rifu)cmocmoB018
CmoCh01G010440Cucurbita moschata (Rifu)cmocmoB367
CmoCh01G010440Cucumber (Gy14) v1cgycmoB0135
CmoCh01G010440Cucurbita maxima (Rimu)cmacmoB048
CmoCh01G010440Wild cucumber (PI 183967)cmocpiB484
CmoCh01G010440Cucumber (Chinese Long) v2cmocuB478
CmoCh01G010440Melon (DHL92) v3.5.1cmomeB390
CmoCh01G010440Watermelon (Charleston Gray)cmowcgB379
CmoCh01G010440Watermelon (97103) v1cmowmB405