CmoCh01G009910 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTACTCCCAGTTTCTGATTCTTCCATCATTCAATATCCTTTCCCGATCATCGATGCAGGTCTTCCGCCAGAGCTCTTCCCACGATGTCAATCGCTGGCCGCCTGGCGTCCGCTTCTACCCAACTGATGAGGAGATCGTAATGCAATTTTTGAAGCCCAAGATATGTGACCCAAAAATTCAGTCCGACTACGTCACCGATATCGATTTCTATAAGTCGGAGCCCGAGGAGTTACCTGGTATCTCACTTTTTCCCTTTCCGATTCTATTTTAGGGTTAGGTTTTCAGTTCGGTTTCCTTTGAACCTAATTGTTTTGTGAAGATCAGCTTCAACTTTGGGTGTTCTGTTTGTGCTATCCGATTCATTGTTTCTGTGGCTCCGATTTCGAATTAGTTCATTTGGGGTAATTTTCTTGCTTTGCTAGTGCTTCTTTGCGAATTCAATTGGTTAATCTATGGTTTCCTGCATGCCTCAGTTTCTGATCCTTTAATTTTTGCACACGCTGATTTAATCTCTGATTACCAGTTTTGATTTTTCTGCTTTACCCTTGGACCCGAAAGTGCCGCGGTTCTTTCTTATTTGTTTTAGTCTTCTTCTTATGTGACTTCTTGATTACATGGAACCTCGTTCTTGATTTGTTCATAGTTCTCCATTTTTGGTAGTATTGATGGAAAGCTTTTGTTGGGATTGTAATCATTTCTGATTTCTGATTTCCGTTAATTACAAGCAATAGTTTGTTGGGTTATGCTTATGGTTTGAGCTTAGTTTTAATTACAAGCAACTATGTGCTATGTCATTCTGTATTGTTTATTCCTGCGTAAAGTTAAATGCTTATTTTTGCATATAGGTTCTAATAATTGAATGCAATTCAGGACTTTCTAAGCTAAAAAATGGTGATAGATTATGGTATTTCTTCAGTCCAATAGTTCTGAAGTTCAGAAATGGGGCAAAATCAGTGAGGACAACCAGACATGGTTTATGGAGAGTTACTGGTAAGAAAGCGTTAGTTAAAAGTAATGGTCGCGCTGTAGGAATGAGGAGGACATTTGTTTTCTATAAACGTCGTGCCTCTATCCCTGAGCGTACTAACTGGGTAATGCACGAATACACCTTAGATGAGAAGGAGCTGAAGAGATGCCCAAATGTGCAGGTAAACATGTTCTTGAAATTGTCCCTTTTTCCTTTTATAATGTTGTTAGTGTTTGCCAAGGTCGTGTGTTCATTATTTCAGGTCTGTTATGCTGTTTGTAAGGTCAGGGAAAAGAGTGGACCTGGTCCGAAAATTGGCGAACAGTATGGAGCACCAGTCAATGACGACTCAGTTGATCAAGTGGTGCTGGTTGAGGAATCTGAGATGGATAGTGTTGTTCTTGATTCACAATATCATAGCCTTCCAAGGTCCATTGAAACGTTTGATTCCGAGCAGCAGCCGAGTAAGGCACCAGAAAGCCTCAACCTTACTGAGTCAGATATGTCTCAATTGCCACCGTCCCAGACACCCAACGCCGAATTTGTCTTTAACGTTTCTGAACTAGCTAGTTGTTCAGGGGATGGCGATTTTCTGGAAATGGCGGATTTTTGTGGTCCTGCAGCTTGTTTAAACACTGAAAACCCATCTGGATCTGGGAACTTGTCGTATGAAGACTTGAACGCTTCGATGGATGAGCTCGATCAATGGCATGATGTGGAGACGTTTTTAAAGGAATTGGGTATGTCTCTAGATGATTTAGGGCCTTCTGAGGATGATGGAACTGTTCCAATGGCAGAGCAGAATGAAAATGTGAATCATGCAGCAAACCCCATGGATGTTCCGTTACAATCCATAATGAAATCCTCTTCTCAAGAAAAATGACGCATTTTTATTATTTTTTTTCCATTTATTCTTGATCTTAAAGAAATAGAGAAATTGATGTGTATAAATTGGATGGAATTATATCCATGAAATTAGAAGTAATTTGTAGCATAAATTTTGTTGGTGTGAGAGATTTTGTAGTTGCGTCAATTCTGGTTGAAGTTTTGATCCAATATGGCAAGCTTCAATACTTTTTTTAAGGAGAAAGG TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTACTCCCAGTTTCTGATTCTTCCATCATTCAATATCCTTTCCCGATCATCGATGCAGGTCTTCCGCCAGAGCTCTTCCCACGATGTCAATCGCTGGCCGCCTGGCGTCCGCTTCTACCCAACTGATGAGGAGATCGTAATGCAATTTTTGAAGCCCAAGATATGTGACCCAAAAATTCAGTCCGACTACGTCACCGATATCGATTTCTATAAGTCGGAGCCCGAGGAGTTACCTGGACTTTCTAAGCTAAAAAATGGTGATAGATTATGGTATTTCTTCAGTCCAATAGTTCTGAAGTTCAGAAATGGGGCAAAATCAGTGAGGACAACCAGACATGGTTTATGGAGAGTTACTGGTAAGAAAGCGTTAGTTAAAAGTAATGGTCGCGCTGTAGGAATGAGGAGGACATTTGTTTTCTATAAACGTCGTGCCTCTATCCCTGAGCGTACTAACTGGGTAATGCACGAATACACCTTAGATGAGAAGGAGCTGAAGAGATGCCCAAATGTGCAGGTCTGTTATGCTGTTTGTAAGGTCAGGGAAAAGAGTGGACCTGGTCCGAAAATTGGCGAACAGTATGGAGCACCAGTCAATGACGACTCAGTTGATCAAGTGGTGCTGGTTGAGGAATCTGAGATGGATAGTGTTGTTCTTGATTCACAATATCATAGCCTTCCAAGGTCCATTGAAACGTTTGATTCCGAGCAGCAGCCGAGTAAGGCACCAGAAAGCCTCAACCTTACTGAGTCAGATATGTCTCAATTGCCACCGTCCCAGACACCCAACGCCGAATTTGTCTTTAACGTTTCTGAACTAGCTAGTTGTTCAGGGGATGGCGATTTTCTGGAAATGGCGGATTTTTGTGGTCCTGCAGCTTGTTTAAACACTGAAAACCCATCTGGATCTGGGAACTTGTCGTATGAAGACTTGAACGCTTCGATGGATGAGCTCGATCAATGGCATGATGTGGAGACGTTTTTAAAGGAATTGGGTATGTCTCTAGATGATTTAGGGCCTTCTGAGGATGATGGAACTGTTCCAATGGCAGAGCAGAATGAAAATGTGAATCATGCAGCAAACCCCATGGATGTTCCGTTACAATCCATAATGAAATCCTCTTCTCAAGAAAAATGACGCATTTTTATTATTTTTTTTCCATTTATTCTTGATCTTAAAGAAATAGAGAAATTGATGTGTATAAATTGGATGGAATTATATCCATGAAATTAGAAGTAATTTGTAGCATAAATTTTGTTGGTGTGAGAGATTTTGTAGTTGCGTCAATTCTGGTTGAAGTTTTGATCCAATATGGCAAGCTTCAATACTTTTTTTAAGGAGAAAGG ATGCAGGTCTTCCGCCAGAGCTCTTCCCACGATGTCAATCGCTGGCCGCCTGGCGTCCGCTTCTACCCAACTGATGAGGAGATCGTAATGCAATTTTTGAAGCCCAAGATATGTGACCCAAAAATTCAGTCCGACTACGTCACCGATATCGATTTCTATAAGTCGGAGCCCGAGGAGTTACCTGGACTTTCTAAGCTAAAAAATGGTGATAGATTATGGTATTTCTTCAGTCCAATAGTTCTGAAGTTCAGAAATGGGGCAAAATCAGTGAGGACAACCAGACATGGTTTATGGAGAGTTACTGGTAAGAAAGCGTTAGTTAAAAGTAATGGTCGCGCTGTAGGAATGAGGAGGACATTTGTTTTCTATAAACGTCGTGCCTCTATCCCTGAGCGTACTAACTGGGTAATGCACGAATACACCTTAGATGAGAAGGAGCTGAAGAGATGCCCAAATGTGCAGGTCTGTTATGCTGTTTGTAAGGTCAGGGAAAAGAGTGGACCTGGTCCGAAAATTGGCGAACAGTATGGAGCACCAGTCAATGACGACTCAGTTGATCAAGTGGTGCTGGTTGAGGAATCTGAGATGGATAGTGTTGTTCTTGATTCACAATATCATAGCCTTCCAAGGTCCATTGAAACGTTTGATTCCGAGCAGCAGCCGAGTAAGGCACCAGAAAGCCTCAACCTTACTGAGTCAGATATGTCTCAATTGCCACCGTCCCAGACACCCAACGCCGAATTTGTCTTTAACGTTTCTGAACTAGCTAGTTGTTCAGGGGATGGCGATTTTCTGGAAATGGCGGATTTTTGTGGTCCTGCAGCTTGTTTAAACACTGAAAACCCATCTGGATCTGGGAACTTGTCGTATGAAGACTTGAACGCTTCGATGGATGAGCTCGATCAATGGCATGATGTGGAGACGTTTTTAAAGGAATTGGGTATGTCTCTAGATGATTTAGGGCCTTCTGAGGATGATGGAACTGTTCCAATGGCAGAGCAGAATGAAAATGTGAATCATGCAGCAAACCCCATGGATGTTCCGTTACAATCCATAATGAAATCCTCTTCTCAAGAAAAATGA
BLAST of CmoCh01G009910 vs. Swiss-Prot
Match: NAC17_ARATH (NAC domain-containing protein 17 OS=Arabidopsis thaliana GN=NAC017 PE=2 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 5.8e-48 Identity = 130/369 (35.23%), Postives = 196/369 (53.12%), Query Frame = 1
BLAST of CmoCh01G009910 vs. Swiss-Prot
Match: NAC16_ARATH (NAC domain-containing protein 16 OS=Arabidopsis thaliana GN=NAC016 PE=2 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 1.1e-46 Identity = 120/333 (36.04%), Postives = 184/333 (55.26%), Query Frame = 1
BLAST of CmoCh01G009910 vs. Swiss-Prot
Match: NAC78_ARATH (NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2) HSP 1 Score: 179.9 bits (455), Expect = 5.1e-44 Identity = 82/171 (47.95%), Postives = 116/171 (67.84%), Query Frame = 1
BLAST of CmoCh01G009910 vs. Swiss-Prot
Match: NAC53_ARATH (NAC domain-containing protein 53 OS=Arabidopsis thaliana GN=NAC053 PE=2 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.4e-41 Identity = 80/171 (46.78%), Postives = 115/171 (67.25%), Query Frame = 1
BLAST of CmoCh01G009910 vs. Swiss-Prot
Match: NAC13_ARATH (NAC domain-containing protein 13 OS=Arabidopsis thaliana GN=NAC13 PE=1 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.7e-39 Identity = 84/181 (46.41%), Postives = 118/181 (65.19%), Query Frame = 1
BLAST of CmoCh01G009910 vs. TrEMBL
Match: A0A0A0K8N5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G207020 PE=4 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 8.6e-59 Identity = 118/216 (54.63%), Postives = 150/216 (69.44%), Query Frame = 1
BLAST of CmoCh01G009910 vs. TrEMBL
Match: A0A0J8BA16_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g199060 PE=4 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 4.7e-57 Identity = 138/345 (40.00%), Postives = 193/345 (55.94%), Query Frame = 1
BLAST of CmoCh01G009910 vs. TrEMBL
Match: D7TFR5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g01820 PE=4 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 3.1e-56 Identity = 115/233 (49.36%), Postives = 151/233 (64.81%), Query Frame = 1
BLAST of CmoCh01G009910 vs. TrEMBL
Match: B9H7Z3_POPTR (No apical meristem family protein OS=Populus trichocarpa GN=POPTR_0005s22180g PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 2.2e-54 Identity = 101/173 (58.38%), Postives = 128/173 (73.99%), Query Frame = 1
BLAST of CmoCh01G009910 vs. TrEMBL
Match: A0A059BUG1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02771 PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 2.2e-54 Identity = 108/187 (57.75%), Postives = 133/187 (71.12%), Query Frame = 1
BLAST of CmoCh01G009910 vs. TAIR10
Match: AT1G34190.1 (AT1G34190.1 NAC domain containing protein 17) HSP 1 Score: 193.0 bits (489), Expect = 3.2e-49 Identity = 130/369 (35.23%), Postives = 196/369 (53.12%), Query Frame = 1
BLAST of CmoCh01G009910 vs. TAIR10
Match: AT1G34180.2 (AT1G34180.2 NAC domain containing protein 16) HSP 1 Score: 179.9 bits (455), Expect = 2.8e-45 Identity = 120/345 (34.78%), Postives = 184/345 (53.33%), Query Frame = 1
BLAST of CmoCh01G009910 vs. TAIR10
Match: AT5G04410.1 (AT5G04410.1 NAC domain containing protein 2) HSP 1 Score: 179.9 bits (455), Expect = 2.8e-45 Identity = 82/171 (47.95%), Postives = 116/171 (67.84%), Query Frame = 1
BLAST of CmoCh01G009910 vs. TAIR10
Match: AT3G10500.1 (AT3G10500.1 NAC domain containing protein 53) HSP 1 Score: 171.8 bits (434), Expect = 7.8e-43 Identity = 80/171 (46.78%), Postives = 115/171 (67.25%), Query Frame = 1
BLAST of CmoCh01G009910 vs. TAIR10
Match: AT1G32870.1 (AT1G32870.1 NAC domain protein 13) HSP 1 Score: 164.9 bits (416), Expect = 9.5e-41 Identity = 84/181 (46.41%), Postives = 118/181 (65.19%), Query Frame = 1
BLAST of CmoCh01G009910 vs. NCBI nr
Match: gi|449444036|ref|XP_004139781.1| (PREDICTED: NAC domain-containing protein 100 [Cucumis sativus]) HSP 1 Score: 235.7 bits (600), Expect = 1.2e-58 Identity = 118/216 (54.63%), Postives = 150/216 (69.44%), Query Frame = 1
BLAST of CmoCh01G009910 vs. NCBI nr
Match: gi|659093848|ref|XP_008447750.1| (PREDICTED: uncharacterized protein LOC103490150 [Cucumis melo]) HSP 1 Score: 235.7 bits (600), Expect = 1.2e-58 Identity = 116/216 (53.70%), Postives = 149/216 (68.98%), Query Frame = 1
BLAST of CmoCh01G009910 vs. NCBI nr
Match: gi|731369311|ref|XP_010696509.1| (PREDICTED: NAC domain-containing protein 74-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 229.9 bits (585), Expect = 6.8e-57 Identity = 138/345 (40.00%), Postives = 193/345 (55.94%), Query Frame = 1
BLAST of CmoCh01G009910 vs. NCBI nr
Match: gi|225463127|ref|XP_002265611.1| (PREDICTED: uncharacterized protein LOC100249427 [Vitis vinifera]) HSP 1 Score: 227.3 bits (578), Expect = 4.4e-56 Identity = 115/233 (49.36%), Postives = 151/233 (64.81%), Query Frame = 1
BLAST of CmoCh01G009910 vs. NCBI nr
Match: gi|1009137528|ref|XP_015886100.1| (PREDICTED: NAC domain-containing protein 17-like [Ziziphus jujuba]) HSP 1 Score: 224.9 bits (572), Expect = 2.2e-55 Identity = 100/169 (59.17%), Postives = 128/169 (75.74%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |