CmoCh01G009500 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh01G009500
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionNAD(P)H-quinone oxidoreductase subunit I, chloroplastic
LocationCmo_Chr01 : 5864108 .. 5864990 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTATGGTCAACAAACAGTACGAGCTGCAAGGTACATTGGTCAGGGTTTCATGATTACTTTATCCCATGCAAATCGTTTGCCTGTAACTATTCAATATCCTTACGAAAAATTAATCGCATCGGAGCGTTTCCGCGGTCGAATCCATTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTTCGTGTATGTCCTATAGATCTCCCCGTTGTTGATTGGAAATTGGAAACGGATATTCGAAAGAAACGATTGCTTAATTACAGTATTGATTTCGGGATCTGTATATTTTGTGGTAACTGCGTTGAATATTGTCCAACAAATTGTTTATCAATGACTGAAGAATATGAACTTTCTACTTATGATCGTCACGAATTGAATTATAATCAAATTTCTTTGGGTCGTTTACCAATGTCAGTAGTTGATGATTATACAATTAGAACAATTCTGAATTCGCCTCAAATTGAAGTCTAAAATAAGTAAATCCCTTGATTAAAGAGTAATTGGAAATTACTAAGGTTCCGTTTTGATCTAAAGAAATGAGGTTTCTTTCGTTTTGTTTGTTTGATCACTACCTACAAATACAAACTATTGATTCATGAGAATTGCAGCTTAATTTAGATTCTATACTCTTTCAGATCAAGACTAAGATTAATACAATAACTGTACCTACATTAATTCACACCCCTTAAGATTTAATTAGGAATTGATTATCCATTTTTTTTCCTGGTCAGATCAATAAGGTCATGAAAAACATTTAGATTTTTTTATCTCTTTTTTTACTACATATAATGGATTTGCCTGGACCGATACATGATTTTCTTGTAGTCTTGTTGGGATCAGGTCTTATTTTAGGAAGTATGGGAGTACTATTATTTAA

mRNA sequence

ATGAATTATGGTCAACAAACAGTACGAGCTGCAAGGTACATTGGTCAGGGTTTCATGATTACTTTATCCCATGCAAATCGTTTGCCTGTAACTATTCAATATCCTTACGAAAAATTAATCGCATCGGAGCGTTTCCGCGGTCGAATCCATTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTTCGTGTATGTCCTATAGATCTCCCCGTTGTTGATTGGAAATTGGAAACGGATATTCGAAAGAAACGATTGCTTAATTACAGTATTGATTTCGGGATCTGTATATTTTGTGGTAACTGCGTTGAATATTGTCCAACAAATTGTTTATCAATGACTGAAGAATATGAACTTTCTACTTATGATCGTCACGAATTGAATTATAATCAAATTTCTTTGGGTCGTTTACCAATGTCTTATTTTAGGAAGTATGGGAGTACTATTATTTAA

Coding sequence (CDS)

ATGAATTATGGTCAACAAACAGTACGAGCTGCAAGGTACATTGGTCAGGGTTTCATGATTACTTTATCCCATGCAAATCGTTTGCCTGTAACTATTCAATATCCTTACGAAAAATTAATCGCATCGGAGCGTTTCCGCGGTCGAATCCATTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTTCGTGTATGTCCTATAGATCTCCCCGTTGTTGATTGGAAATTGGAAACGGATATTCGAAAGAAACGATTGCTTAATTACAGTATTGATTTCGGGATCTGTATATTTTGTGGTAACTGCGTTGAATATTGTCCAACAAATTGTTTATCAATGACTGAAGAATATGAACTTTCTACTTATGATCGTCACGAATTGAATTATAATCAAATTTCTTTGGGTCGTTTACCAATGTCTTATTTTAGGAAGTATGGGAGTACTATTATTTAA
Homology
[Close]
BLAST of CmoCh01G009500 vs. Swiss-Prot
Match: NDHI_CUCSA (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Cucumis sativus GN=ndhI PE=3 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 8.2e-81
Identity = 140/145 (96.55%), Postives = 141/145 (97.24%), Query Frame = 1 

Query: 1   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE 60
           MNYGQQTVRAARYIGQGF+ITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE
Sbjct: 9   MNYGQQTVRAARYIGQGFVITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE 68

Query: 61  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 120
           VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS
Sbjct: 69  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 128

Query: 121 TYDRHELNYNQISLGRLPMSYFRKY 146
           TYDRHELNYNQISLGRLPMS    Y
Sbjct: 129 TYDRHELNYNQISLGRLPMSVVDDY 153

[Close]
BLAST of CmoCh01G009500 vs. Swiss-Prot
Match: NDHI_GUATU (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Guardiola tulocarpus GN=ndhI PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 1.1e-80
Identity = 139/145 (95.86%), Postives = 140/145 (96.55%), Query Frame = 1 

Query: 1   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE 60
           MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLI SERFRGRIHFEFDKCIACE
Sbjct: 9   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACE 68

Query: 61  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 120
           VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS
Sbjct: 69  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 128

Query: 121 TYDRHELNYNQISLGRLPMSYFRKY 146
           TYDRHELNYNQI+LGRLPMS    Y
Sbjct: 129 TYDRHELNYNQIALGRLPMSIIDNY 153

[Close]
BLAST of CmoCh01G009500 vs. Swiss-Prot
Match: NDHI_MARCE (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Marshallia caespitosa GN=ndhI PE=3 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 1.4e-80
Identity = 139/145 (95.86%), Postives = 140/145 (96.55%), Query Frame = 1 

Query: 1   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE 60
           MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLI SERFRGRIHFEFDKCIACE
Sbjct: 9   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACE 68

Query: 61  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 120
           VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS
Sbjct: 69  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 128

Query: 121 TYDRHELNYNQISLGRLPMSYFRKY 146
           TYDRHELNYNQI+LGRLPMS    Y
Sbjct: 129 TYDRHELNYNQIALGRLPMSVIDDY 153

[Close]
BLAST of CmoCh01G009500 vs. Swiss-Prot
Match: NDHI_ATHGP (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Athroisma gracile subsp. psyllioides GN=ndhI PE=3 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 1.4e-80
Identity = 139/145 (95.86%), Postives = 140/145 (96.55%), Query Frame = 1 

Query: 1   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE 60
           MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLI SERFRGRIHFEFDKCIACE
Sbjct: 9   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACE 68

Query: 61  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 120
           VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS
Sbjct: 69  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 128

Query: 121 TYDRHELNYNQISLGRLPMSYFRKY 146
           TYDRHELNYNQI+LGRLPMS    Y
Sbjct: 129 TYDRHELNYNQIALGRLPMSVIDDY 153

[Close]
BLAST of CmoCh01G009500 vs. Swiss-Prot
Match: NDHI_SYNNO (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Synedrella nodiflora GN=ndhI PE=3 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 1.4e-80
Identity = 139/145 (95.86%), Postives = 140/145 (96.55%), Query Frame = 1 

Query: 1   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE 60
           MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLI SERFRGRIHFEFDKCIACE
Sbjct: 9   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACE 68

Query: 61  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 120
           VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS
Sbjct: 69  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 128

Query: 121 TYDRHELNYNQISLGRLPMSYFRKY 146
           TYDRHELNYNQI+LGRLPMS    Y
Sbjct: 129 TYDRHELNYNQIALGRLPMSIIDDY 153

[Close]
BLAST of CmoCh01G009500 vs. TrEMBL
Match: A0A0S2IGK1_CUCPE (NADH-quinone oxidoreductase subunit I OS=Cucurbita pepo subsp. fraterna GN=ndhI PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 3.1e-79
Identity = 141/145 (97.24%), Postives = 141/145 (97.24%), Query Frame = 1 

Query: 1   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE 60
           MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE
Sbjct: 9   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE 68

Query: 61  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 120
           VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS
Sbjct: 69  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 128

Query: 121 TYDRHELNYNQISLGRLPMSYFRKY 146
           TYDRHELNYNQISLGRLPMS    Y
Sbjct: 129 TYDRHELNYNQISLGRLPMSVVDDY 153

[Close]
BLAST of CmoCh01G009500 vs. TrEMBL
Match: A0A0S2IGY0_CUCPE (NADH-quinone oxidoreductase subunit I OS=Cucurbita pepo subsp. ovifera GN=ndhI PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 3.1e-79
Identity = 141/145 (97.24%), Postives = 141/145 (97.24%), Query Frame = 1 

Query: 1   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE 60
           MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE
Sbjct: 9   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE 68

Query: 61  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 120
           VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS
Sbjct: 69  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 128

Query: 121 TYDRHELNYNQISLGRLPMSYFRKY 146
           TYDRHELNYNQISLGRLPMS    Y
Sbjct: 129 TYDRHELNYNQISLGRLPMSVVDDY 153

[Close]
BLAST of CmoCh01G009500 vs. TrEMBL
Match: A0A0S2IF05_9ROSI (NADH-quinone oxidoreductase subunit I OS=Cucurbita ficifolia GN=ndhI PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 3.1e-79
Identity = 141/145 (97.24%), Postives = 141/145 (97.24%), Query Frame = 1 

Query: 1   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE 60
           MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE
Sbjct: 9   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE 68

Query: 61  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 120
           VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS
Sbjct: 69  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 128

Query: 121 TYDRHELNYNQISLGRLPMSYFRKY 146
           TYDRHELNYNQISLGRLPMS    Y
Sbjct: 129 TYDRHELNYNQISLGRLPMSVVDDY 153

[Close]
BLAST of CmoCh01G009500 vs. TrEMBL
Match: A0A0S2IGG5_CUCPE (NADH-quinone oxidoreductase subunit I OS=Cucurbita pepo subsp. pepo GN=ndhI PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 3.1e-79
Identity = 141/145 (97.24%), Postives = 141/145 (97.24%), Query Frame = 1 

Query: 1   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE 60
           MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE
Sbjct: 9   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE 68

Query: 61  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 120
           VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS
Sbjct: 69  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 128

Query: 121 TYDRHELNYNQISLGRLPMSYFRKY 146
           TYDRHELNYNQISLGRLPMS    Y
Sbjct: 129 TYDRHELNYNQISLGRLPMSVVDDY 153

[Close]
BLAST of CmoCh01G009500 vs. TrEMBL
Match: A0A0S2IFS2_9ROSI (NADH-quinone oxidoreductase subunit I OS=Cucurbita okeechobeensis subsp. martinezii GN=ndhI PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 3.1e-79
Identity = 141/145 (97.24%), Postives = 141/145 (97.24%), Query Frame = 1 

Query: 1   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE 60
           MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE
Sbjct: 9   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE 68

Query: 61  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 120
           VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS
Sbjct: 69  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 128

Query: 121 TYDRHELNYNQISLGRLPMSYFRKY 146
           TYDRHELNYNQISLGRLPMS    Y
Sbjct: 129 TYDRHELNYNQISLGRLPMSVVDDY 153

[Close]
BLAST of CmoCh01G009500 vs. TAIR10
Match: ATCG01090.1 (ATCG01090.1 NADPH dehydrogenases)

HSP 1 Score: 293.9 bits (751), Expect = 5.6e-80
Identity = 135/145 (93.10%), Postives = 138/145 (95.17%), Query Frame = 1 

Query: 1   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE 60
           MNYGQQT+RAARYIGQGFMITLSH NRLPVTIQYPYEKLI SERFRGRIHFEFDKCIACE
Sbjct: 9   MNYGQQTLRAARYIGQGFMITLSHTNRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACE 68

Query: 61  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 120
           VCVRVCPIDLPVVDWKLET+IRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYE S
Sbjct: 69  VCVRVCPIDLPVVDWKLETNIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYEFS 128

Query: 121 TYDRHELNYNQISLGRLPMSYFRKY 146
           TYDRHELNYNQI+LGRLPMS    Y
Sbjct: 129 TYDRHELNYNQIALGRLPMSVIDDY 153

[Close]
BLAST of CmoCh01G009500 vs. TAIR10
Match: AT1G16700.1 (AT1G16700.1 Alpha-helical ferredoxin)

HSP 1 Score: 77.8 bits (190), Expect = 6.3e-15
Identity = 43/124 (34.68%), Postives = 63/124 (50.81%), Query Frame = 1 

Query: 16  QGFMITLSHANRLPVTIQYPYEKLIASERFRG-----RIHFEFDKCIACEVCVRVCPIDL 75
           +G  +TL +     VTI YP+EK   S RFRG     R     ++CIAC++C  VCP   
Sbjct: 78  RGLSLTLKYFFDPKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAVCPAQA 137

Query: 76  PVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYN 135
             ++ + E +   +R   Y ID   CI+CG C E CP + +     +E +T    EL Y+
Sbjct: 138 ITIEAE-EREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYD 197

[Close]
BLAST of CmoCh01G009500 vs. TAIR10
Match: AT1G79010.1 (AT1G79010.1 Alpha-helical ferredoxin)

HSP 1 Score: 77.8 bits (190), Expect = 6.3e-15
Identity = 43/124 (34.68%), Postives = 63/124 (50.81%), Query Frame = 1 

Query: 16  QGFMITLSHANRLPVTIQYPYEKLIASERFRG-----RIHFEFDKCIACEVCVRVCPIDL 75
           +G  +TL +     VTI YP+EK   S RFRG     R     ++CIAC++C  VCP   
Sbjct: 78  RGLSLTLKYFFDPKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAVCPAQA 137

Query: 76  PVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYN 135
             ++ + E +   +R   Y ID   CI+CG C E CP + +     +E +T    EL Y+
Sbjct: 138 ITIEAE-EREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYD 197

[Close]
BLAST of CmoCh01G009500 vs. NCBI nr
Match: gi|952954372|gb|ALO21736.1| (NdhI (plastid) [Cucurbita argyrosperma])

HSP 1 Score: 302.4 bits (773), Expect = 4.5e-79
Identity = 141/145 (97.24%), Postives = 141/145 (97.24%), Query Frame = 1 

Query: 1   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE 60
           MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE
Sbjct: 9   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE 68

Query: 61  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 120
           VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS
Sbjct: 69  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 128

Query: 121 TYDRHELNYNQISLGRLPMSYFRKY 146
           TYDRHELNYNQISLGRLPMS    Y
Sbjct: 129 TYDRHELNYNQISLGRLPMSVVDDY 153

[Close]
BLAST of CmoCh01G009500 vs. NCBI nr
Match: gi|346578248|ref|YP_004841839.1| (NADH-plastoquinone oxidoreductase subunit I [Cucumis melo subsp. melo])

HSP 1 Score: 302.4 bits (773), Expect = 4.5e-79
Identity = 141/145 (97.24%), Postives = 141/145 (97.24%), Query Frame = 1 

Query: 1   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE 60
           MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE
Sbjct: 9   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE 68

Query: 61  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 120
           VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS
Sbjct: 69  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 128

Query: 121 TYDRHELNYNQISLGRLPMSYFRKY 146
           TYDRHELNYNQISLGRLPMS    Y
Sbjct: 129 TYDRHELNYNQISLGRLPMSVVDDY 153

[Close]
BLAST of CmoCh01G009500 vs. NCBI nr
Match: gi|590000466|ref|YP_009004095.1| (NADH-plastoquinone oxidoreductase subunit I [Cucumis hystrix])

HSP 1 Score: 300.8 bits (769), Expect = 1.3e-78
Identity = 140/145 (96.55%), Postives = 141/145 (97.24%), Query Frame = 1 

Query: 1   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE 60
           MNYGQQTVRAARYIGQGF+ITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE
Sbjct: 9   MNYGQQTVRAARYIGQGFVITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE 68

Query: 61  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 120
           VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS
Sbjct: 69  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 128

Query: 121 TYDRHELNYNQISLGRLPMSYFRKY 146
           TYDRHELNYNQISLGRLPMS    Y
Sbjct: 129 TYDRHELNYNQISLGRLPMSVVDDY 153

[Close]
BLAST of CmoCh01G009500 vs. NCBI nr
Match: gi|168188342|gb|ACA14559.1| (NADH dehydrogenase subunit I (chloroplast) [Perezia purpurata])

HSP 1 Score: 300.8 bits (769), Expect = 1.3e-78
Identity = 139/145 (95.86%), Postives = 140/145 (96.55%), Query Frame = 1 

Query: 1   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE 60
           MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLI SERFRGRIHFEFDKCIACE
Sbjct: 9   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACE 68

Query: 61  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 120
           VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS
Sbjct: 69  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 128

Query: 121 TYDRHELNYNQISLGRLPMSYFRKY 146
           TYDRHELNYNQI+LGRLPMS    Y
Sbjct: 129 TYDRHELNYNQIALGRLPMSVIEDY 153

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BLAST of CmoCh01G009500 vs. NCBI nr
Match: gi|937547318|ref|YP_009170315.1| (NADH-plastoquinone oxidoreductase subunit I (chloroplast) [Silybum marianum])

HSP 1 Score: 300.8 bits (769), Expect = 1.3e-78
Identity = 139/142 (97.89%), Postives = 140/142 (98.59%), Query Frame = 1 

Query: 1   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACE 60
           MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLI SERFRGRIHFEFDKCIACE
Sbjct: 9   MNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACE 68

Query: 61  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 120
           VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS
Sbjct: 69  VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELS 128

Query: 121 TYDRHELNYNQISLGRLPMSYF 143
           TYDRHELNYNQI+LGRLPMS F
Sbjct: 129 TYDRHELNYNQIALGRLPMSVF 150

The following BLAST results are available for this feature:
BLAST of CmoCh01G009500 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NDHI_CUCSA8.2e-8196.55NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Cucumis sativus GN=nd... [more]
NDHI_GUATU1.1e-8095.86NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Guardiola tulocarpus ... [more]
NDHI_MARCE1.4e-8095.86NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Marshallia caespitosa... [more]
NDHI_ATHGP1.4e-8095.86NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Athroisma gracile sub... [more]
NDHI_SYNNO1.4e-8095.86NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Synedrella nodiflora ... [more]
BLAST of CmoCh01G009500 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0S2IGK1_CUCPE3.1e-7997.24NADH-quinone oxidoreductase subunit I OS=Cucurbita pepo subsp. fraterna GN=ndhI ... [more]
A0A0S2IGY0_CUCPE3.1e-7997.24NADH-quinone oxidoreductase subunit I OS=Cucurbita pepo subsp. ovifera GN=ndhI P... [more]
A0A0S2IF05_9ROSI3.1e-7997.24NADH-quinone oxidoreductase subunit I OS=Cucurbita ficifolia GN=ndhI PE=3 SV=1[more]
A0A0S2IGG5_CUCPE3.1e-7997.24NADH-quinone oxidoreductase subunit I OS=Cucurbita pepo subsp. pepo GN=ndhI PE=3... [more]
A0A0S2IFS2_9ROSI3.1e-7997.24NADH-quinone oxidoreductase subunit I OS=Cucurbita okeechobeensis subsp. martine... [more]
BLAST of CmoCh01G009500 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG01090.15.6e-8093.10ATCG01090.1 NADPH dehydrogenases[more]
AT1G16700.16.3e-1534.68 Alpha-helical ferredoxin[more]
AT1G79010.16.3e-1534.68 Alpha-helical ferredoxin[more]
BLAST of CmoCh01G009500 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|952954372|gb|ALO21736.1|4.5e-7997.24NdhI (plastid) [Cucurbita argyrosperma][more]
gi|346578248|ref|YP_004841839.1|4.5e-7997.24NADH-plastoquinone oxidoreductase subunit I [Cucumis melo subsp. melo][more]
gi|590000466|ref|YP_009004095.1|1.3e-7896.55NADH-plastoquinone oxidoreductase subunit I [Cucumis hystrix][more]
gi|168188342|gb|ACA14559.1|1.3e-7895.86NADH dehydrogenase subunit I (chloroplast) [Perezia purpurata][more]
gi|937547318|ref|YP_009170315.1|1.3e-7897.89NADH-plastoquinone oxidoreductase subunit I (chloroplast) [Silybum marianum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004497NADH_plast_OxRdtase_su_I
IPR010226NADH_quinone_OxRdtase_chainI
IPR0178964Fe4S_Fe-S-bd
IPR0179004Fe4S_Fe_S_CS
Vocabulary: Molecular Function
TermDefinition
GO:0008137NADH dehydrogenase (ubiquinone) activity
GO:0016651oxidoreductase activity, acting on NAD(P)H
GO:00515394 iron, 4 sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006120 mitochondrial electron transport, NADH to ubiquinone
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0015992 proton transport
biological_process GO:0006814 sodium ion transport
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0016020 membrane
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
molecular_function GO:0048038 quinone binding
molecular_function GO:0016651 oxidoreductase activity, acting on NAD(P)H
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G009500.1CmoCh01G009500.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004497NADH-plastoquinone oxidoreductase, subunit ITIGRFAMsTIGR00403TIGR00403coord: 1..142
score: 2.7
IPR010226NADH-quinone oxidoreductase, chain IHAMAPMF_01351NDH1_NuoIcoord: 8..139
score: 2
IPR010226NADH-quinone oxidoreductase, chain ITIGRFAMsTIGR01971TIGR01971coord: 17..134
score: 6.7
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPFAMPF13187Fer4_9coord: 55..110
score: 2.
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPROFILEPS513794FE4S_FER_2coord: 47..76
score: 9.735coord: 87..116
score: 10
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved sitePROSITEPS001984FE4S_FER_1coord: 56..67
score: -coord: 96..107
scor
NoneNo IPR availableGENE3DG3DSA:3.30.70.20coord: 18..115
score: 3.2
NoneNo IPR availablePANTHERPTHR10849NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 8, MITOCHONDRIALcoord: 1..140
score: 9.6
NoneNo IPR availableunknownSSF548624Fe-4S ferredoxinscoord: 34..132
score: 7.95

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh01G009500Watermelon (97103) v2cmowmbB498
CmoCh01G009500Wax gourdcmowgoB0571
CmoCh01G009500Wax gourdcmowgoB0621
CmoCh01G009500Cucurbita maxima (Rimu)cmacmoB468
CmoCh01G009500Cucurbita maxima (Rimu)cmacmoB471
CmoCh01G009500Wild cucumber (PI 183967)cmocpiB477
CmoCh01G009500Cucumber (Chinese Long) v2cmocuB473
CmoCh01G009500Melon (DHL92) v3.5.1cmomeB401
CmoCh01G009500Watermelon (Charleston Gray)cmowcgB379
CmoCh01G009500Watermelon (Charleston Gray)cmowcgB429
CmoCh01G009500Watermelon (97103) v1cmowmB405
CmoCh01G009500Cucurbita pepo (Zucchini)cmocpeB448
CmoCh01G009500Bottle gourd (USVL1VR-Ls)cmolsiB397
CmoCh01G009500Bottle gourd (USVL1VR-Ls)cmolsiB440
CmoCh01G009500Cucumber (Gy14) v2cgybcmoB753
CmoCh01G009500Melon (DHL92) v3.6.1cmomedB462
CmoCh01G009500Cucumber (Chinese Long) v3cmocucB0566