CmoCh01G009330 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G009330
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	22.0 kDa class IV heat shock protein
Location	Cmo_Chr01 : 5377056 .. 5377670 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCAAATACATTCCACTTATAAAGTACTCTTCATCATCCCCCGACTTCACCCATCCACCAAAAATGGAACCATCCAAAGCAAAGAAAGCAGCACTTTTGATGTTCACTCTTCTTCTCCTGACCTCATCAACAGCCTCTCTGCTTCCATTCTCCGACCCATTTGGGATTCTGGAACAAACCCCTTTTAGCTTCCAAAACGAAAACAGAGATGCTCTGCAGCACCCACTCCAGCCCACCAGAGTGGACTGGAAGGAGACGCCGGAGAGGCATGTGATCATGCTGGATGTGCCCGGGCTTAAGAAGGGCGAGCTGAACATCGAGTTGGACGACGAAAACAGGGTCATCAAAGTGATGGGAGAGAGGAAAAGAGAGGACCAAAAACAGAGCGATCACTGGCACCGAATCGAGAGAAGCTATGGGAAATTCTGGAGGCAGTTTGGGGTGCCCAGAAATGCGGATATGGAGTCTGTTAGAGCTCGGCTGGAGAATGGGGTTCTCACTCTCACATTGTCCAAGGTCTCCCCGGAGAAGGTTAAGGATCCCAAAGTGGTGAGCATTGAAGAACCGCGGGCGGAGCTGACCAAGTCGGGCGGAGCCAAGCAGGAGCTCTGA

mRNA sequence

ATGCCCAAATACATTCCACTTATAAAGTACTCTTCATCATCCCCCGACTTCACCCATCCACCAAAAATGGAACCATCCAAAGCAAAGAAAGCAGCACTTTTGATGTTCACTCTTCTTCTCCTGACCTCATCAACAGCCTCTCTGCTTCCATTCTCCGACCCATTTGGGATTCTGGAACAAACCCCTTTTAGCTTCCAAAACGAAAACAGAGATGCTCTGCAGCACCCACTCCAGCCCACCAGAGTGGACTGGAAGGAGACGCCGGAGAGGCATGTGATCATGCTGGATGTGCCCGGGCTTAAGAAGGGCGAGCTGAACATCGAGTTGGACGACGAAAACAGGGTCATCAAAGTGATGGGAGAGAGGAAAAGAGAGGACCAAAAACAGAGCGATCACTGGCACCGAATCGAGAGAAGCTATGGGAAATTCTGGAGGCAGTTTGGGGTGCCCAGAAATGCGGATATGGAGTCTGTTAGAGCTCGGCTGGAGAATGGGGTTCTCACTCTCACATTGTCCAAGGTCTCCCCGGAGAAGGTTAAGGATCCCAAAGTGGTGAGCATTGAAGAACCGCGGGCGGAGCTGACCAAGTCGGGCGGAGCCAAGCAGGAGCTCTGA

Coding sequence (CDS)

ATGCCCAAATACATTCCACTTATAAAGTACTCTTCATCATCCCCCGACTTCACCCATCCACCAAAAATGGAACCATCCAAAGCAAAGAAAGCAGCACTTTTGATGTTCACTCTTCTTCTCCTGACCTCATCAACAGCCTCTCTGCTTCCATTCTCCGACCCATTTGGGATTCTGGAACAAACCCCTTTTAGCTTCCAAAACGAAAACAGAGATGCTCTGCAGCACCCACTCCAGCCCACCAGAGTGGACTGGAAGGAGACGCCGGAGAGGCATGTGATCATGCTGGATGTGCCCGGGCTTAAGAAGGGCGAGCTGAACATCGAGTTGGACGACGAAAACAGGGTCATCAAAGTGATGGGAGAGAGGAAAAGAGAGGACCAAAAACAGAGCGATCACTGGCACCGAATCGAGAGAAGCTATGGGAAATTCTGGAGGCAGTTTGGGGTGCCCAGAAATGCGGATATGGAGTCTGTTAGAGCTCGGCTGGAGAATGGGGTTCTCACTCTCACATTGTCCAAGGTCTCCCCGGAGAAGGTTAAGGATCCCAAAGTGGTGAGCATTGAAGAACCGCGGGCGGAGCTGACCAAGTCGGGCGGAGCCAAGCAGGAGCTCTGA

Homology

[Close]

BLAST of CmoCh01G009330 vs. Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 8.1e-47
Identity = 100/189 (52.91%), Postives = 130/189 (68.78%), Query Frame = 1


Query: 34  LMFTLLLLTSSTASLLPFSDP----------------FGILEQTPFSFQNENRDALQHPL 93
           L F LL +  +  SLLPF DP                F +LE  PF     ++D     +
Sbjct: 8   LFFLLLCVAKANGSLLPFMDPPITLLADLWSDRFPDPFRVLEHIPFGV---DKDEASMAM 67

Query: 94  QPTRVDWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIE 153
            P RVDWKETPE HVIMLDVPGLK+ E+ +E++ ENRV++V GERK+E++K+ DHWHR+E
Sbjct: 68  SPARVDWKETPEGHVIMLDVPGLKREEIKVEVE-ENRVLRVSGERKKEEEKKGDHWHRVE 127

Query: 154 RSYGKFWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSI--EEPRAELT 205
           RSYGKFWRQF +P+N D++SV+A+LENGVLTLTL K+SP K+K P+VVSI  E+ +    
Sbjct: 128 RSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLDKLSPGKIKGPRVVSIAGEDHQQGNL 187

[Close]

BLAST of CmoCh01G009330 vs. Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.7e-42
Identity = 88/150 (58.67%), Postives = 113/150 (75.33%), Query Frame = 1


Query: 51  FSDPFGILEQTPFSFQNENRDALQHPLQPTRVDWKETPERHVIMLDVPGLKKGELNIELD 110
           F DPF ILE+ P   + +   AL     P RVDWKET E H IMLD+PGLKK E+ IE++
Sbjct: 46  FPDPFKILERIPLGLERDTSVALS----PARVDWKETAEGHEIMLDIPGLKKDEVKIEVE 105

Query: 111 DENRVIKVMGERKREDQKQSDHWHRIERSYGKFWRQFGVPRNADMESVRARLENGVLTLT 170
            EN V++V GERKRE++K+ D WHR+ERSYGKFWRQF +P N DMESV+A+LENGVLT+ 
Sbjct: 106 -ENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVLTIN 165

Query: 171 LSKVSPEKVKDPKVVSI---EEPRAELTKS 198
           L+K+SPEKVK P+VV+I   E+  A+++ S
Sbjct: 166 LTKLSPEKVKGPRVVNIAAEEDQTAKISSS 190

[Close]

BLAST of CmoCh01G009330 vs. Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 4.6e-42
Identity = 94/179 (52.51%), Postives = 125/179 (69.83%), Query Frame = 1


Query: 33  LLMFTLLLLTS-----STASLLPF----------------SDPFGILEQTPFSFQ-NENR 92
           L+ F LL+L +     + ASLLPF                 DPF +LEQ P+  + +E  
Sbjct: 10  LVPFLLLILAADFPLKAKASLLPFIDSPNTLLSDLWSDRFPDPFRVLEQIPYGVEKHEPS 69

Query: 93  DALQHPLQPTRVDWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQS 152
             L H     RVDWKETPE HVIM+DVPGLKK ++ IE++ ENRV++V GERK+E+ K+ 
Sbjct: 70  ITLSH----ARVDWKETPEGHVIMVDVPGLKKDDIKIEVE-ENRVLRVSGERKKEEDKKG 129

Query: 153 DHWHRIERSYGKFWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSIEE 190
           DHWHR+ERSYGKFWRQF +P+N D++SV+A++ENGVLTLTL K+S +K+K P++VSI E
Sbjct: 130 DHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVLTLTLHKLSHDKIKGPRMVSIVE 183

[Close]

BLAST of CmoCh01G009330 vs. Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 8.6e-33
Identity = 68/144 (47.22%), Postives = 101/144 (70.14%), Query Frame = 1


Query: 48  LLPFSDPFGILEQTPFSFQNENRDALQHPLQPTRVDWKETPERHVIMLDVPGLKKGELNI 107
           LL  +DPF ILE  PF F  ++   L       RVDW+ET + H +++DVPG++K +L +
Sbjct: 48  LLAAADPFRILEHVPFGFDRDDVAMLSM----ARVDWRETGDAHEVVVDVPGMRKEDLRV 107

Query: 108 ELDDENRVIKVMGERKREDQKQS----DHWHRIERSYGKFWRQFGVPRNADMESVRARLE 167
           E++D NRV+++ GER+RE+  +     DHWHR ERSYG+FWRQ  +P NAD++S+ A L+
Sbjct: 108 EVED-NRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLD 167

Query: 168 NGVLTLTLSKVSPEKVKDPKVVSI 188
           NGVLT+   K++P+++K P+VV I
Sbjct: 168 NGVLTVRFRKLAPDQIKGPRVVGI 186

[Close]

BLAST of CmoCh01G009330 vs. Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.9e-28
Identity = 68/144 (47.22%), Postives = 94/144 (65.28%), Query Frame = 1


Query: 53  DPFGILEQTPFS---FQNENRDALQHPLQ-----PTRVDWKETPERHVIMLDVPGLKKGE 112
           DPF +    PF    F N    A   P +      TR+DWKETPE HV   D+PGLKK E
Sbjct: 1   DPFSLDVWDPFKDFPFTNSALSASSFPQENSAFVSTRIDWKETPEAHVFKADLPGLKKEE 60

Query: 113 LNIELDDENRVIKVMGERKREDQKQSDHWHRIERSYGKFWRQFGVPRNADMESVRARLEN 172
           + +E++D+ RV+++ GER  E + ++D WHR+ERS GKF R+F +P NA M+ V+A +EN
Sbjct: 61  VKVEIEDD-RVLQISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMEN 120

Query: 173 GVLTLTLSKVSPEKVKDPKVVSIE 189
           GVLT+T+ K   E++K P+V SIE
Sbjct: 121 GVLTVTVPK---EEIKKPEVKSIE 140

[Close]

BLAST of CmoCh01G009330 vs. TrEMBL
Match: H6TB46_CITLA (HSP20.3 OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 9.2e-58
Identity = 117/171 (68.42%), Postives = 139/171 (81.29%), Query Frame = 1


Query: 29  KKAALLMFTLL----LLTSSTASLLPFSDPFGILEQTPFSF-QNENRDALQHPLQPTRVD 88
           K   L +F +     LLT S  SLLPF DPFGILEQTPF   +NENRDALQ PL P RVD
Sbjct: 5   KAVQLFLFAIFISSFLLTPSEPSLLPFIDPFGILEQTPFGLLENENRDALQQPLPPARVD 64

Query: 89  WKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSYGKF 148
           WKETPE HVIMLDVPG+ K E+ IELD+ENR++KV+GERKRE++KQS+HWHR+ERSYGKF
Sbjct: 65  WKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLERSYGKF 124

Query: 149 WRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSI--EEPRA 193
           WRQF +P NADMESV+A+L+NGVL +TLSK+SPEK+K P+VV I  E+P A
Sbjct: 125 WRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPPA 175

[Close]

BLAST of CmoCh01G009330 vs. TrEMBL
Match: A0A0A0KSN3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G646740 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 3.9e-56
Identity = 120/185 (64.86%), Postives = 144/185 (77.84%), Query Frame = 1


Query: 30  KAALLMFTLL-----LLTSSTASLLPFSDPFGILEQTPFSF-QNENRDALQH-PLQPTRV 89
           KA  L+F+ +     LLTSS  SLLPF DPFGILEQTPF   +NEN+D LQ  PL P RV
Sbjct: 5   KAIQLIFSTIFIFAFLLTSSHPSLLPFIDPFGILEQTPFGLLENENKDVLQQQPLPPARV 64

Query: 90  DWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSYGK 149
           DWKET E H IM+DVPG+ K EL IELD+ENRV+KV+GERKRE++KQSDHWHR+ERSYGK
Sbjct: 65  DWKETAESHEIMVDVPGMNKEELKIELDEENRVLKVIGERKREEEKQSDHWHRLERSYGK 124

Query: 150 FWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSI---EEPRAELTKSGG 205
           FWRQ  +P NAD+ESV+A+LENGVL ++L K+S EK+K P+VV I   + P  E+ KSG 
Sbjct: 125 FWRQLRLPVNADLESVKAKLENGVLKISLLKLSQEKIKGPRVVGILDEQPPAGEMNKSGA 184

[Close]

BLAST of CmoCh01G009330 vs. TrEMBL
Match: V7BHH5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G113700g PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 3.3e-47
Identity = 102/190 (53.68%), Postives = 135/190 (71.05%), Query Frame = 1


Query: 33  LLMFTLLLLTSSTASLLPF----------------SDPFGILEQTPFSFQNENRDALQHP 92
           +L   LLL+T +  SLLPF                 DPF +LEQ PF  + + +  +   
Sbjct: 7   ILFLLLLLVTKANGSLLPFIDPPRGVLAELLSDRFPDPFHVLEQIPFGVEKDEQSMV--- 66

Query: 93  LQPTRVDWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRI 152
           + P RVDWKETPE HV+MLDVPG+K+ E+ IE++ ENRV++V GERKRE++K+ DHWHR+
Sbjct: 67  MSPARVDWKETPEGHVMMLDVPGMKREEIKIEVE-ENRVLRVSGERKREEEKKGDHWHRV 126

Query: 153 ERSYGKFWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSI--EEPRAEL 205
           ERSYGKFWRQF +P+N D++SV+A+LENGVLTLTL K+SPEK+K P+VVSI  E+ +   
Sbjct: 127 ERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLDKLSPEKIKGPRVVSIAGEDQQQAK 186

[Close]

BLAST of CmoCh01G009330 vs. TrEMBL
Match: A0A067KS43_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06695 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 5.6e-47
Identity = 104/189 (55.03%), Postives = 131/189 (69.31%), Query Frame = 1


Query: 32  ALLMFTLLLLTSSTASLLPF----------------SDPFGILEQTPFSFQNENRDALQH 91
           ++L+  L    SS  S+LPF                SDPF ILEQ PF  + ++  AL  
Sbjct: 11  SILLLLLCFPVSSNGSILPFVDSPGSRLTDFWADRFSDPFRILEQIPFEIERDDSVALS- 70

Query: 92  PLQPTRVDWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHR 151
              P RVDWKETPE H+IMLDVPGLKK EL IE++ ENRV++V GERKRE++K+ DHWHR
Sbjct: 71  ---PARVDWKETPEGHLIMLDVPGLKKEELKIEVE-ENRVLRVSGERKREEEKKGDHWHR 130

Query: 152 IERSYGKFWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSIEEPRAELT 205
           +ERSYGKFWRQF +P N D++SV+A+LENGVLTL+ SK+SP+K+K P+VVSI      + 
Sbjct: 131 VERSYGKFWRQFKLPDNVDLDSVKAKLENGVLTLSFSKLSPDKIKGPRVVSIAGEENAML 190

[Close]

BLAST of CmoCh01G009330 vs. TrEMBL
Match: B9S1R4_RICCO (Heat-shock protein, putative OS=Ricinus communis GN=RCOM_0867440 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 9.6e-47
Identity = 107/185 (57.84%), Postives = 131/185 (70.81%), Query Frame = 1


Query: 36  FTLLLLTSSTASLLPF------------SDPFGILEQTPFSFQNENRDALQHPLQPTRVD 95
           F LLL + S ASLLPF            SDPF +LEQ PF    ++  AL     P RVD
Sbjct: 13  FLLLLWSPSNASLLPFVDRPGSLLTDFWSDPFRVLEQIPFGIDRDDNVALS----PARVD 72

Query: 96  WKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSYGKF 155
           WKETPE H+IMLDVPGLKK EL IEL  ENRV++V GERK+E++K+ D WHR+ERSYGKF
Sbjct: 73  WKETPESHMIMLDVPGLKKEELKIELL-ENRVLRVSGERKKEEEKKGDQWHRVERSYGKF 132

Query: 156 WRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSI----EEPRAELTKSGG 205
           WRQF +P N D++SV+A+LENGVLTL+L+K+SP+K+K P+VVSI    E+P      S  
Sbjct: 133 WRQFRLPDNVDLDSVKAKLENGVLTLSLNKLSPDKIKGPRVVSIAGEEEKPEPVKLNSNN 192

[Close]

BLAST of CmoCh01G009330 vs. TAIR10
Match: AT4G10250.1 (AT4G10250.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 173.3 bits (438), Expect = 1.5e-43
Identity = 88/150 (58.67%), Postives = 113/150 (75.33%), Query Frame = 1


Query: 51  FSDPFGILEQTPFSFQNENRDALQHPLQPTRVDWKETPERHVIMLDVPGLKKGELNIELD 110
           F DPF ILE+ P   + +   AL     P RVDWKET E H IMLD+PGLKK E+ IE++
Sbjct: 46  FPDPFKILERIPLGLERDTSVALS----PARVDWKETAEGHEIMLDIPGLKKDEVKIEVE 105

Query: 111 DENRVIKVMGERKREDQKQSDHWHRIERSYGKFWRQFGVPRNADMESVRARLENGVLTLT 170
            EN V++V GERKRE++K+ D WHR+ERSYGKFWRQF +P N DMESV+A+LENGVLT+ 
Sbjct: 106 -ENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVLTIN 165

Query: 171 LSKVSPEKVKDPKVVSI---EEPRAELTKS 198
           L+K+SPEKVK P+VV+I   E+  A+++ S
Sbjct: 166 LTKLSPEKVKGPRVVNIAAEEDQTAKISSS 190

[Close]

BLAST of CmoCh01G009330 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2)

HSP 1 Score: 119.0 bits (297), Expect = 3.4e-27
Identity = 58/108 (53.70%), Postives = 84/108 (77.78%), Query Frame = 1


Query: 81  RVDWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSY 140
           RVDWKETPE HV   D+PGLKK E+ +E++D+N V+++ GER +E+++++D WHR+ER+ 
Sbjct: 53  RVDWKETPEAHVFKADLPGLKKEEVKVEVEDKN-VLQISGERSKENEEKNDKWHRVERAS 112

Query: 141 GKFWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSIE 189
           GKF R+F +P NA ME V+A +ENGVLT+ + K +PE  K P+V SI+
Sbjct: 113 GKFMRRFRLPENAKMEEVKATMENGVLTVVVPK-APE--KKPQVKSID 156

[Close]

BLAST of CmoCh01G009330 vs. TAIR10
Match: AT3G46230.1 (AT3G46230.1 heat shock protein 17.4)

HSP 1 Score: 115.9 bits (289), Expect = 2.9e-26
Identity = 55/108 (50.93%), Postives = 81/108 (75.00%), Query Frame = 1


Query: 81  RVDWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSY 140
           +VDW+ETPE HV   DVPGLKK E+ +E++D N ++++ GER  E++++SD WHR+ERS 
Sbjct: 50  KVDWRETPEAHVFKADVPGLKKEEVKVEVEDGN-ILQISGERSSENEEKSDTWHRVERSS 109

Query: 141 GKFWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSIE 189
           GKF R+F +P NA +E V+A +ENGVL++T+ KV   K   P+V S++
Sbjct: 110 GKFMRRFRLPENAKVEEVKASMENGVLSVTVPKVQESK---PEVKSVD 153

[Close]

BLAST of CmoCh01G009330 vs. TAIR10
Match: AT1G53540.1 (AT1G53540.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 115.2 bits (287), Expect = 4.9e-26
Identity = 53/107 (49.53%), Postives = 81/107 (75.70%), Query Frame = 1


Query: 81  RVDWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSY 140
           +VDW+ETPE HV   D+PGL+K E+ +E++D N ++++ GER  E+++++D WHR+ERS 
Sbjct: 51  KVDWRETPEAHVFKADLPGLRKEEVKVEVEDGN-ILQISGERSNENEEKNDKWHRVERSS 110

Query: 141 GKFWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSI 188
           GKF R+F +P NA ME ++A +ENGVL++T+ KV PEK  + K + I
Sbjct: 111 GKFTRRFRLPENAKMEEIKASMENGVLSVTVPKV-PEKKPEVKSIDI 155

[Close]

BLAST of CmoCh01G009330 vs. TAIR10
Match: AT2G29500.1 (AT2G29500.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 111.3 bits (277), Expect = 7.0e-25
Identity = 61/142 (42.96%), Postives = 89/142 (62.68%), Query Frame = 1


Query: 50  PFS----DPFGILEQTPFSFQNENRDALQHPLQPTRVDWKETPERHVIMLDVPGLKKGEL 109
           PFS    DPF  L  +  S +N         +   RVDW+ETPE HV   D+PGLKK E+
Sbjct: 19  PFSLDVWDPFKELTSSSLSRENS-------AIVNARVDWRETPEAHVFKADLPGLKKEEV 78

Query: 110 NIELDDENRVIKVMGERKREDQKQSDHWHRIERSYGKFWRQFGVPRNADMESVRARLENG 169
            +E+++++ V+K+ GER  E + ++D WHR+ERS G+F R+F +P N  M+ V+A +ENG
Sbjct: 79  KVEIEEDS-VLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENG 138

Query: 170 VLTLTLSKVSPEKVKDPKVVSI 188
           VLT+T+ K   +K  D K + I
Sbjct: 139 VLTVTVPKAETKKA-DVKSIQI 151

[Close]

BLAST of CmoCh01G009330 vs. NCBI nr
Match: gi|659119141|ref|XP_008459498.1| (PREDICTED: 22.0 kDa class IV heat shock protein [Cucumis melo])

HSP 1 Score: 233.8 bits (595), Expect = 2.7e-58
Identity = 123/185 (66.49%), Postives = 147/185 (79.46%), Query Frame = 1


Query: 30  KAALLMFTLL-----LLTSSTASLLPFSDPFGILEQTPFSF-QNENRDALQH-PLQPTRV 89
           KA  L+F+ +     L+TSS  SLLPF DPFGILEQTPF   +NEN+DALQ  PL P RV
Sbjct: 5   KAIQLIFSTVFIFAFLITSSQPSLLPFIDPFGILEQTPFGLLENENKDALQQQPLPPARV 64

Query: 90  DWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSYGK 149
           DWKET E H IM+DVPG+ K EL IELD+ENRV+KV+GERKRE++KQSDHWHR+ERSYGK
Sbjct: 65  DWKETAESHEIMVDVPGMNKEELKIELDEENRVLKVIGERKREEEKQSDHWHRLERSYGK 124

Query: 150 FWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSI---EEPRAELTKSGG 205
           FWRQ  +P NAD+ESV+A+LENGVL +TLSK+SPEK+K P+VV I   + P  E+ KSG 
Sbjct: 125 FWRQLRLPVNADLESVKAKLENGVLKITLSKLSPEKIKGPRVVGILDEQPPAGEINKSGA 184

[Close]

BLAST of CmoCh01G009330 vs. NCBI nr
Match: gi|315932726|gb|ADU55793.1| (HSP20.3 [Citrullus lanatus])

HSP 1 Score: 231.5 bits (589), Expect = 1.3e-57
Identity = 117/171 (68.42%), Postives = 139/171 (81.29%), Query Frame = 1


Query: 29  KKAALLMFTLL----LLTSSTASLLPFSDPFGILEQTPFSF-QNENRDALQHPLQPTRVD 88
           K   L +F +     LLT S  SLLPF DPFGILEQTPF   +NENRDALQ PL P RVD
Sbjct: 5   KAVQLFLFAIFISSFLLTPSEPSLLPFIDPFGILEQTPFGLLENENRDALQQPLPPARVD 64

Query: 89  WKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSYGKF 148
           WKETPE HVIMLDVPG+ K E+ IELD+ENR++KV+GERKRE++KQS+HWHR+ERSYGKF
Sbjct: 65  WKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLERSYGKF 124

Query: 149 WRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSI--EEPRA 193
           WRQF +P NADMESV+A+L+NGVL +TLSK+SPEK+K P+VV I  E+P A
Sbjct: 125 WRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPPA 175

[Close]

BLAST of CmoCh01G009330 vs. NCBI nr
Match: gi|449447525|ref|XP_004141518.1| (PREDICTED: 22.0 kDa class IV heat shock protein [Cucumis sativus])

HSP 1 Score: 226.1 bits (575), Expect = 5.6e-56
Identity = 120/185 (64.86%), Postives = 144/185 (77.84%), Query Frame = 1


Query: 30  KAALLMFTLL-----LLTSSTASLLPFSDPFGILEQTPFSF-QNENRDALQH-PLQPTRV 89
           KA  L+F+ +     LLTSS  SLLPF DPFGILEQTPF   +NEN+D LQ  PL P RV
Sbjct: 5   KAIQLIFSTIFIFAFLLTSSHPSLLPFIDPFGILEQTPFGLLENENKDVLQQQPLPPARV 64

Query: 90  DWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRIERSYGK 149
           DWKET E H IM+DVPG+ K EL IELD+ENRV+KV+GERKRE++KQSDHWHR+ERSYGK
Sbjct: 65  DWKETAESHEIMVDVPGMNKEELKIELDEENRVLKVIGERKREEEKQSDHWHRLERSYGK 124

Query: 150 FWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSI---EEPRAELTKSGG 205
           FWRQ  +P NAD+ESV+A+LENGVL ++L K+S EK+K P+VV I   + P  E+ KSG 
Sbjct: 125 FWRQLRLPVNADLESVKAKLENGVLKISLLKLSQEKIKGPRVVGILDEQPPAGEMNKSGA 184

[Close]

BLAST of CmoCh01G009330 vs. NCBI nr
Match: gi|593686502|ref|XP_007143922.1| (hypothetical protein PHAVU_007G113700g [Phaseolus vulgaris])

HSP 1 Score: 196.4 bits (498), Expect = 4.7e-47
Identity = 102/190 (53.68%), Postives = 135/190 (71.05%), Query Frame = 1


Query: 33  LLMFTLLLLTSSTASLLPF----------------SDPFGILEQTPFSFQNENRDALQHP 92
           +L   LLL+T +  SLLPF                 DPF +LEQ PF  + + +  +   
Sbjct: 7   ILFLLLLLVTKANGSLLPFIDPPRGVLAELLSDRFPDPFHVLEQIPFGVEKDEQSMV--- 66

Query: 93  LQPTRVDWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHRI 152
           + P RVDWKETPE HV+MLDVPG+K+ E+ IE++ ENRV++V GERKRE++K+ DHWHR+
Sbjct: 67  MSPARVDWKETPEGHVMMLDVPGMKREEIKIEVE-ENRVLRVSGERKREEEKKGDHWHRV 126

Query: 153 ERSYGKFWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSI--EEPRAEL 205
           ERSYGKFWRQF +P+N D++SV+A+LENGVLTLTL K+SPEK+K P+VVSI  E+ +   
Sbjct: 127 ERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLDKLSPEKIKGPRVVSIAGEDQQQAK 186

[Close]

BLAST of CmoCh01G009330 vs. NCBI nr
Match: gi|802599850|ref|XP_012072628.1| (PREDICTED: 22.0 kDa class IV heat shock protein [Jatropha curcas])

HSP 1 Score: 195.7 bits (496), Expect = 8.1e-47
Identity = 104/189 (55.03%), Postives = 131/189 (69.31%), Query Frame = 1


Query: 32  ALLMFTLLLLTSSTASLLPF----------------SDPFGILEQTPFSFQNENRDALQH 91
           ++L+  L    SS  S+LPF                SDPF ILEQ PF  + ++  AL  
Sbjct: 11  SILLLLLCFPVSSNGSILPFVDSPGSRLTDFWADRFSDPFRILEQIPFEIERDDSVALS- 70

Query: 92  PLQPTRVDWKETPERHVIMLDVPGLKKGELNIELDDENRVIKVMGERKREDQKQSDHWHR 151
              P RVDWKETPE H+IMLDVPGLKK EL IE++ ENRV++V GERKRE++K+ DHWHR
Sbjct: 71  ---PARVDWKETPEGHLIMLDVPGLKKEELKIEVE-ENRVLRVSGERKREEEKKGDHWHR 130

Query: 152 IERSYGKFWRQFGVPRNADMESVRARLENGVLTLTLSKVSPEKVKDPKVVSIEEPRAELT 205
           +ERSYGKFWRQF +P N D++SV+A+LENGVLTL+ SK+SP+K+K P+VVSI      + 
Sbjct: 131 VERSYGKFWRQFKLPDNVDLDSVKAKLENGVLTLSFSKLSPDKIKGPRVVSIAGEENAML 190

The following BLAST results are available for this feature:

BLAST of CmoCh01G009330 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HSP41_SOYBN	8.1e-47	52.91	22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1	[more]
HSP22_ARATH	2.7e-42	58.67	22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1	[more]
HSP41_PEA	4.6e-42	52.51	22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1	[more]
HS232_ORYSJ	8.6e-33	47.22	23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2	[more]
HSP11_MEDSA	2.9e-28	47.22	18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=...	[more]

BLAST of CmoCh01G009330 vs. TrEMBL


Match Name	E-value	Identity	Description
H6TB46_CITLA	9.2e-58	68.42	HSP20.3 OS=Citrullus lanatus PE=2 SV=1	[more]
A0A0A0KSN3_CUCSA	3.9e-56	64.86	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G646740 PE=3 SV=1	[more]
V7BHH5_PHAVU	3.3e-47	53.68	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G113700g PE=3 SV=1	[more]
A0A067KS43_JATCU	5.6e-47	55.03	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06695 PE=3 SV=1	[more]
B9S1R4_RICCO	9.6e-47	57.84	Heat-shock protein, putative OS=Ricinus communis GN=RCOM_0867440 PE=3 SV=1	[more]

BLAST of CmoCh01G009330 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G10250.1	1.5e-43	58.67	HSP20-like chaperones superfamily protein	[more]
AT5G59720.1	3.4e-27	53.70	heat shock protein 18.2	[more]
AT3G46230.1	2.9e-26	50.93	heat shock protein 17.4	[more]
AT1G53540.1	4.9e-26	49.53	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	7.0e-25	42.96	HSP20-like chaperones superfamily protein	[more]

BLAST of CmoCh01G009330 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119141\|ref\|XP_008459498.1\|	2.7e-58	66.49	PREDICTED: 22.0 kDa class IV heat shock protein [Cucumis melo]	[more]
gi\|315932726\|gb\|ADU55793.1\|	1.3e-57	68.42	HSP20.3 [Citrullus lanatus]	[more]
gi\|449447525\|ref\|XP_004141518.1\|	5.6e-56	64.86	PREDICTED: 22.0 kDa class IV heat shock protein [Cucumis sativus]	[more]
gi\|593686502\|ref\|XP_007143922.1\|	4.7e-47	53.68	hypothetical protein PHAVU_007G113700g [Phaseolus vulgaris]	[more]
gi\|802599850\|ref\|XP_012072628.1\|	8.1e-47	55.03	PREDICTED: 22.0 kDa class IV heat shock protein [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009628	response to abiotic stimulus
biological_process	GO:0006950	response to stress
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G009330.1	CmoCh01G009330.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 83..187 score: 4.1
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 83..173 score: 22
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 55..188 score: 4.4
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 74..184 score: 3.14
None	No IPR available	PANTHER	PTHR11527:SF135	22.0 KDA HEAT SHOCK PROTEIN	coord: 51..195 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G009330	Watermelon (Charleston Gray)	cmowcgB429
CmoCh01G009330	Watermelon (97103) v1	cmowmB411
CmoCh01G009330	Cucurbita pepo (Zucchini)	cmocpeB448
CmoCh01G009330	Cucurbita pepo (Zucchini)	cmocpeB468
CmoCh01G009330	Bottle gourd (USVL1VR-Ls)	cmolsiB440
CmoCh01G009330	Cucumber (Gy14) v2	cgybcmoB611
CmoCh01G009330	Cucumber (Gy14) v2	cgybcmoB753
CmoCh01G009330	Melon (DHL92) v3.6.1	cmomedB431
CmoCh01G009330	Silver-seed gourd	carcmoB0832
CmoCh01G009330	Cucumber (Chinese Long) v3	cmocucB0565
CmoCh01G009330	Watermelon (97103) v2	cmowmbB481
CmoCh01G009330	Wax gourd	cmowgoB0553
CmoCh01G009330	Cucurbita moschata (Rifu)	cmocmoB024
CmoCh01G009330	Cucumber (Gy14) v1	cgycmoB0661
CmoCh01G009330	Cucurbita maxima (Rimu)	cmacmoB046
CmoCh01G009330	Cucurbita maxima (Rimu)	cmacmoB056
CmoCh01G009330	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G009330	Wild cucumber (PI 183967)	cmocpiB476
CmoCh01G009330	Cucumber (Chinese Long) v2	cmocuB472
CmoCh01G009330	Melon (DHL92) v3.5.1	cmomeB375