CmoCh01G009310 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G009310
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	22.0 kDa class IV heat shock protein
Location	Cmo_Chr01 : 5353002 .. 5353550 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATATCCAAAGCAAAGAAAGCAGCACTTTTGGTGTTCACTCTTCTTCTCCTTACCTCATCAACAGCCTCTCCGCTTCCATTCTTCGACCCATTTGGGATTCTGGAGCAAACCCCTTTTAGCTTCCAAGACGAAAACAGAGATGCTCTGCAGCACCCACTCCAGCCCACCAGAGTGGACTGGAAGGAGACGCCGGAGAGGCATGTGATCATGCTGGATGTGCCTGGACTTGACAGGGATGAGCTGAAGATCGAATTGGACGACGAGAACAGGGTCATCAAAGTGATGGGAGAGAGGAAAAGAGAGGAGGAAAAACAGAGCGATCACTGGCACCGAGTCGAGAGAAGTTATGGCAAATTCTGGAGGCAATTTCGGGTGCCCAGAAATGCGGATATGGAGTCTGTTAGAGCTCGGCTGGAGAATGGGGTTCTCACGGTGACGTTGTCCAAGGTCTCGCCGGAGAAGGTTAAGGATCCCAAAGTGGTGAGCATTGAAGAACCGCGGGCGGAGCAGGCGAAGTTGGGAGGGGCCAAGCAAGAGCTTTGA

mRNA sequence

ATGGCAATATCCAAAGCAAAGAAAGCAGCACTTTTGGTGTTCACTCTTCTTCTCCTTACCTCATCAACAGCCTCTCCGCTTCCATTCTTCGACCCATTTGGGATTCTGGAGCAAACCCCTTTTAGCTTCCAAGACGAAAACAGAGATGCTCTGCAGCACCCACTCCAGCCCACCAGAGTGGACTGGAAGGAGACGCCGGAGAGGCATGTGATCATGCTGGATGTGCCTGGACTTGACAGGGATGAGCTGAAGATCGAATTGGACGACGAGAACAGGGTCATCAAAGTGATGGGAGAGAGGAAAAGAGAGGAGGAAAAACAGAGCGATCACTGGCACCGAGTCGAGAGAAGTTATGGCAAATTCTGGAGGCAATTTCGGGTGCCCAGAAATGCGGATATGGAGTCTGTTAGAGCTCGGCTGGAGAATGGGGTTCTCACGGTGACGTTGTCCAAGGTCTCGCCGGAGAAGGTTAAGGATCCCAAAGTGGTGAGCATTGAAGAACCGCGGGCGGAGCAGGCGAAGTTGGGAGGGGCCAAGCAAGAGCTTTGA

Coding sequence (CDS)

ATGGCAATATCCAAAGCAAAGAAAGCAGCACTTTTGGTGTTCACTCTTCTTCTCCTTACCTCATCAACAGCCTCTCCGCTTCCATTCTTCGACCCATTTGGGATTCTGGAGCAAACCCCTTTTAGCTTCCAAGACGAAAACAGAGATGCTCTGCAGCACCCACTCCAGCCCACCAGAGTGGACTGGAAGGAGACGCCGGAGAGGCATGTGATCATGCTGGATGTGCCTGGACTTGACAGGGATGAGCTGAAGATCGAATTGGACGACGAGAACAGGGTCATCAAAGTGATGGGAGAGAGGAAAAGAGAGGAGGAAAAACAGAGCGATCACTGGCACCGAGTCGAGAGAAGTTATGGCAAATTCTGGAGGCAATTTCGGGTGCCCAGAAATGCGGATATGGAGTCTGTTAGAGCTCGGCTGGAGAATGGGGTTCTCACGGTGACGTTGTCCAAGGTCTCGCCGGAGAAGGTTAAGGATCCCAAAGTGGTGAGCATTGAAGAACCGCGGGCGGAGCAGGCGAAGTTGGGAGGGGCCAAGCAAGAGCTTTGA

Homology

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BLAST of CmoCh01G009310 vs. Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.2e-47
Identity = 104/189 (55.03%), Postives = 130/189 (68.78%), Query Frame = 1


Query: 12  LVFTLLLLTSSTASPLPFFDP----------------FGILEQTPFSFQDENRDALQHPL 71
           L F LL +  +  S LPF DP                F +LE  PF     ++D     +
Sbjct: 8   LFFLLLCVAKANGSLLPFMDPPITLLADLWSDRFPDPFRVLEHIPFGV---DKDEASMAM 67

Query: 72  QPTRVDWKETPERHVIMLDVPGLDRDELKIELDDENRVIKVMGERKREEEKQSDHWHRVE 131
            P RVDWKETPE HVIMLDVPGL R+E+K+E++ ENRV++V GERK+EEEK+ DHWHRVE
Sbjct: 68  SPARVDWKETPEGHVIMLDVPGLKREEIKVEVE-ENRVLRVSGERKKEEEKKGDHWHRVE 127

Query: 132 RSYGKFWRQFRVPRNADMESVRARLENGVLTVTLSKVSPEKVKDPKVVSIEEPRAEQAKL 183
           RSYGKFWRQFR+P+N D++SV+A+LENGVLT+TL K+SP K+K P+VVSI     +Q  L
Sbjct: 128 RSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLDKLSPGKIKGPRVVSIAGEDHQQGNL 187

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BLAST of CmoCh01G009310 vs. Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 4.8e-43
Identity = 90/153 (58.82%), Postives = 115/153 (75.16%), Query Frame = 1


Query: 29  FFDPFGILEQTPFSFQDENRDALQHPLQPTRVDWKETPERHVIMLDVPGLDRDELKIELD 88
           F DPF ILE+ P   + +   AL     P RVDWKET E H IMLD+PGL +DE+KIE++
Sbjct: 46  FPDPFKILERIPLGLERDTSVALS----PARVDWKETAEGHEIMLDIPGLKKDEVKIEVE 105

Query: 89  DENRVIKVMGERKREEEKQSDHWHRVERSYGKFWRQFRVPRNADMESVRARLENGVLTVT 148
            EN V++V GERKREEEK+ D WHRVERSYGKFWRQF++P N DMESV+A+LENGVLT+ 
Sbjct: 106 -ENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVLTIN 165

Query: 149 LSKVSPEKVKDPKVVSIEEPRAEQAKLGGAKQE 182
           L+K+SPEKVK P+VV+I     + AK+  ++ +
Sbjct: 166 LTKLSPEKVKGPRVVNIAAEEDQTAKISSSESK 193

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BLAST of CmoCh01G009310 vs. Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 5.3e-42
Identity = 84/147 (57.14%), Postives = 115/147 (78.23%), Query Frame = 1


Query: 29  FFDPFGILEQTPFSFQDENRDALQHPLQPTRVDWKETPERHVIMLDVPGLDRDELKIELD 88
           F DPF +LEQ P+  +          L   RVDWKETPE HVIM+DVPGL +D++KIE++
Sbjct: 49  FPDPFRVLEQIPYGVEKHEPSIT---LSHARVDWKETPEGHVIMVDVPGLKKDDIKIEVE 108

Query: 89  DENRVIKVMGERKREEEKQSDHWHRVERSYGKFWRQFRVPRNADMESVRARLENGVLTVT 148
            ENRV++V GERK+EE+K+ DHWHRVERSYGKFWRQF++P+N D++SV+A++ENGVLT+T
Sbjct: 109 -ENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVLTLT 168

Query: 149 LSKVSPEKVKDPKVVSIEEPRAEQAKL 176
           L K+S +K+K P++VSI E   + +K+
Sbjct: 169 LHKLSHDKIKGPRMVSIVEEDDKPSKI 191

[Close]

BLAST of CmoCh01G009310 vs. Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 1.1e-31
Identity = 83/207 (40.10%), Postives = 127/207 (61.35%), Query Frame = 1


Query: 1   MAISKAKKAALLVFTLLLLTSSTASP---LPFF-------------------DPFGILEQ 60
           MA  +   AA ++  + ++ +STA+    LP+F                   DPF ILE 
Sbjct: 1   MASMRTAAAAAMLACIAVVLASTAADGALLPWFGGGGARDEAVPELGLLAAADPFRILEH 60

Query: 61  TPFSFQDENRDALQHPLQPTRVDWKETPERHVIMLDVPGLDRDELKIELDDENRVIKVMG 120
            PF F D +  A+   L   RVDW+ET + H +++DVPG+ +++L++E++D NRV+++ G
Sbjct: 61  VPFGF-DRDDVAM---LSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVED-NRVLRISG 120

Query: 121 ERKREEEKQS----DHWHRVERSYGKFWRQFRVPRNADMESVRARLENGVLTVTLSKVSP 179
           ER+REE  +     DHWHR ERSYG+FWRQ R+P NAD++S+ A L+NGVLTV   K++P
Sbjct: 121 ERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNGVLTVRFRKLAP 180

[Close]

BLAST of CmoCh01G009310 vs. Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 8.8e-29
Identity = 71/140 (50.71%), Postives = 97/140 (69.29%), Query Frame = 1


Query: 28  PFFD-PFGILEQTPFSFQDENRDALQHPLQPTRVDWKETPERHVIMLDVPGLDRDELKIE 87
           PF D PF     +  SF  EN   +      TR+DWKETPE HV   D+PGL ++E+K+E
Sbjct: 10  PFKDFPFTNSALSASSFPQENSAFVS-----TRIDWKETPEAHVFKADLPGLKKEEVKVE 69

Query: 88  LDDENRVIKVMGERKREEEKQSDHWHRVERSYGKFWRQFRVPRNADMESVRARLENGVLT 147
           ++D+ RV+++ GER  E+E ++D WHRVERS GKF R+FR+P NA M+ V+A +ENGVLT
Sbjct: 70  IEDD-RVLQISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVLT 129

Query: 148 VTLSKVSPEKVKDPKVVSIE 167
           VT+ K   E++K P+V SIE
Sbjct: 130 VTVPK---EEIKKPEVKSIE 140

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BLAST of CmoCh01G009310 vs. TrEMBL
Match: H6TB46_CITLA (HSP20.3 OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 6.3e-58
Identity = 119/171 (69.59%), Postives = 142/171 (83.04%), Query Frame = 1


Query: 7   KKAALLVFTLL----LLTSSTASPLPFFDPFGILEQTPFSF-QDENRDALQHPLQPTRVD 66
           K   L +F +     LLT S  S LPF DPFGILEQTPF   ++ENRDALQ PL P RVD
Sbjct: 5   KAVQLFLFAIFISSFLLTPSEPSLLPFIDPFGILEQTPFGLLENENRDALQQPLPPARVD 64

Query: 67  WKETPERHVIMLDVPGLDRDELKIELDDENRVIKVMGERKREEEKQSDHWHRVERSYGKF 126
           WKETPE HVIMLDVPG++++E+KIELD+ENR++KV+GERKREEEKQS+HWHR+ERSYGKF
Sbjct: 65  WKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLERSYGKF 124

Query: 127 WRQFRVPRNADMESVRARLENGVLTVTLSKVSPEKVKDPKVVSI--EEPRA 171
           WRQFR+P NADMESV+A+L+NGVL VTLSK+SPEK+K P+VV I  E+P A
Sbjct: 125 WRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPPA 175

[Close]

BLAST of CmoCh01G009310 vs. TrEMBL
Match: A0A0A0KSN3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G646740 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 5.0e-55
Identity = 120/185 (64.86%), Postives = 145/185 (78.38%), Query Frame = 1


Query: 8   KAALLVFTLL-----LLTSSTASPLPFFDPFGILEQTPFSF-QDENRDALQH-PLQPTRV 67
           KA  L+F+ +     LLTSS  S LPF DPFGILEQTPF   ++EN+D LQ  PL P RV
Sbjct: 5   KAIQLIFSTIFIFAFLLTSSHPSLLPFIDPFGILEQTPFGLLENENKDVLQQQPLPPARV 64

Query: 68  DWKETPERHVIMLDVPGLDRDELKIELDDENRVIKVMGERKREEEKQSDHWHRVERSYGK 127
           DWKET E H IM+DVPG++++ELKIELD+ENRV+KV+GERKREEEKQSDHWHR+ERSYGK
Sbjct: 65  DWKETAESHEIMVDVPGMNKEELKIELDEENRVLKVIGERKREEEKQSDHWHRLERSYGK 124

Query: 128 FWRQFRVPRNADMESVRARLENGVLTVTLSKVSPEKVKDPKVVSI---EEPRAEQAKLGG 183
           FWRQ R+P NAD+ESV+A+LENGVL ++L K+S EK+K P+VV I   + P  E  K G 
Sbjct: 125 FWRQLRLPVNADLESVKAKLENGVLKISLLKLSQEKIKGPRVVGILDEQPPAGEMNKSGA 184

[Close]

BLAST of CmoCh01G009310 vs. TrEMBL
Match: V7BHH5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G113700g PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.5e-48
Identity = 108/190 (56.84%), Postives = 137/190 (72.11%), Query Frame = 1


Query: 11  LLVFTLLLLTSSTASPLPFFDP----------------FGILEQTPFSFQDENRDALQHP 70
           +L   LLL+T +  S LPF DP                F +LEQ PF  + + +  +   
Sbjct: 7   ILFLLLLLVTKANGSLLPFIDPPRGVLAELLSDRFPDPFHVLEQIPFGVEKDEQSMV--- 66

Query: 71  LQPTRVDWKETPERHVIMLDVPGLDRDELKIELDDENRVIKVMGERKREEEKQSDHWHRV 130
           + P RVDWKETPE HV+MLDVPG+ R+E+KIE++ ENRV++V GERKREEEK+ DHWHRV
Sbjct: 67  MSPARVDWKETPEGHVMMLDVPGMKREEIKIEVE-ENRVLRVSGERKREEEKKGDHWHRV 126

Query: 131 ERSYGKFWRQFRVPRNADMESVRARLENGVLTVTLSKVSPEKVKDPKVVSIEEPRAEQAK 183
           ERSYGKFWRQFR+P+N D++SV+A+LENGVLT+TL K+SPEK+K P+VVSI     +QAK
Sbjct: 127 ERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLDKLSPEKIKGPRVVSIAGEDQQQAK 186

[Close]

BLAST of CmoCh01G009310 vs. TrEMBL
Match: A0A151U5N6_CAJCA (22.0 kDa class IV heat shock protein OS=Cajanus cajan GN=KK1_007286 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.1e-45
Identity = 105/191 (54.97%), Postives = 132/191 (69.11%), Query Frame = 1


Query: 12  LVFTLLLLTSSTASPLPFFDP----------------FGILEQTPFSFQDENRDALQHPL 71
           L F LL +  +  S LPF DP                F +LEQ PF  +   +D     +
Sbjct: 8   LFFLLLFVAKANGSLLPFIDPPSTLLTDLWSDRFPDPFRVLEQIPFGIE---KDEASTAM 67

Query: 72  QPTRVDWKETPERHVIMLDVPGLDRDELKIELDDENRVIKVMGERKREEEKQSDHWHRVE 131
            P RVDWKETPE HVIM+DVPGL R+E+KIE++ ENRV++V GERKREEEK+ DHWHRVE
Sbjct: 68  SPARVDWKETPEGHVIMIDVPGLKREEIKIEVE-ENRVLRVSGERKREEEKKGDHWHRVE 127

Query: 132 RSYGKFWRQFRVPRNADMESVRARLENGVLTVTLSKVSPEKVKDPKVVSIEEPRAEQAKL 183
           RS GKFWRQFR+P+N D++SV+ARLENGVL++TL K+SP+K+K P+VVSI     +QA+L
Sbjct: 128 RSCGKFWRQFRLPQNVDLDSVKARLENGVLSLTLDKLSPDKIKGPRVVSIAGEDHQQARL 187

[Close]

BLAST of CmoCh01G009310 vs. TrEMBL
Match: B9S1R4_RICCO (Heat-shock protein, putative OS=Ricinus communis GN=RCOM_0867440 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.1e-45
Identity = 109/185 (58.92%), Postives = 133/185 (71.89%), Query Frame = 1


Query: 14  FTLLLLTSSTASPLPFFD------------PFGILEQTPFSFQDENRDALQHPLQPTRVD 73
           F LLL + S AS LPF D            PF +LEQ PF    ++  AL     P RVD
Sbjct: 13  FLLLLWSPSNASLLPFVDRPGSLLTDFWSDPFRVLEQIPFGIDRDDNVALS----PARVD 72

Query: 74  WKETPERHVIMLDVPGLDRDELKIELDDENRVIKVMGERKREEEKQSDHWHRVERSYGKF 133
           WKETPE H+IMLDVPGL ++ELKIEL  ENRV++V GERK+EEEK+ D WHRVERSYGKF
Sbjct: 73  WKETPESHMIMLDVPGLKKEELKIELL-ENRVLRVSGERKKEEEKKGDQWHRVERSYGKF 132

Query: 134 WRQFRVPRNADMESVRARLENGVLTVTLSKVSPEKVKDPKVVSI--EEPRAEQAKL--GG 183
           WRQFR+P N D++SV+A+LENGVLT++L+K+SP+K+K P+VVSI  EE + E  KL    
Sbjct: 133 WRQFRLPDNVDLDSVKAKLENGVLTLSLNKLSPDKIKGPRVVSIAGEEEKPEPVKLNSNN 192

[Close]

BLAST of CmoCh01G009310 vs. TAIR10
Match: AT4G10250.1 (AT4G10250.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 175.6 bits (444), Expect = 2.7e-44
Identity = 90/153 (58.82%), Postives = 115/153 (75.16%), Query Frame = 1


Query: 29  FFDPFGILEQTPFSFQDENRDALQHPLQPTRVDWKETPERHVIMLDVPGLDRDELKIELD 88
           F DPF ILE+ P   + +   AL     P RVDWKET E H IMLD+PGL +DE+KIE++
Sbjct: 46  FPDPFKILERIPLGLERDTSVALS----PARVDWKETAEGHEIMLDIPGLKKDEVKIEVE 105

Query: 89  DENRVIKVMGERKREEEKQSDHWHRVERSYGKFWRQFRVPRNADMESVRARLENGVLTVT 148
            EN V++V GERKREEEK+ D WHRVERSYGKFWRQF++P N DMESV+A+LENGVLT+ 
Sbjct: 106 -ENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVLTIN 165

Query: 149 LSKVSPEKVKDPKVVSIEEPRAEQAKLGGAKQE 182
           L+K+SPEKVK P+VV+I     + AK+  ++ +
Sbjct: 166 LTKLSPEKVKGPRVVNIAAEEDQTAKISSSESK 193

[Close]

BLAST of CmoCh01G009310 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2)

HSP 1 Score: 120.9 bits (302), Expect = 7.9e-28
Identity = 61/108 (56.48%), Postives = 85/108 (78.70%), Query Frame = 1


Query: 59  RVDWKETPERHVIMLDVPGLDRDELKIELDDENRVIKVMGERKREEEKQSDHWHRVERSY 118
           RVDWKETPE HV   D+PGL ++E+K+E++D+N V+++ GER +E E+++D WHRVER+ 
Sbjct: 53  RVDWKETPEAHVFKADLPGLKKEEVKVEVEDKN-VLQISGERSKENEEKNDKWHRVERAS 112

Query: 119 GKFWRQFRVPRNADMESVRARLENGVLTVTLSKVSPEKVKDPKVVSIE 167
           GKF R+FR+P NA ME V+A +ENGVLTV + K +PE  K P+V SI+
Sbjct: 113 GKFMRRFRLPENAKMEEVKATMENGVLTVVVPK-APE--KKPQVKSID 156

[Close]

BLAST of CmoCh01G009310 vs. TAIR10
Match: AT3G46230.1 (AT3G46230.1 heat shock protein 17.4)

HSP 1 Score: 118.2 bits (295), Expect = 5.1e-27
Identity = 58/108 (53.70%), Postives = 82/108 (75.93%), Query Frame = 1


Query: 59  RVDWKETPERHVIMLDVPGLDRDELKIELDDENRVIKVMGERKREEEKQSDHWHRVERSY 118
           +VDW+ETPE HV   DVPGL ++E+K+E++D N ++++ GER  E E++SD WHRVERS 
Sbjct: 50  KVDWRETPEAHVFKADVPGLKKEEVKVEVEDGN-ILQISGERSSENEEKSDTWHRVERSS 109

Query: 119 GKFWRQFRVPRNADMESVRARLENGVLTVTLSKVSPEKVKDPKVVSIE 167
           GKF R+FR+P NA +E V+A +ENGVL+VT+ KV   K   P+V S++
Sbjct: 110 GKFMRRFRLPENAKVEEVKASMENGVLSVTVPKVQESK---PEVKSVD 153

[Close]

BLAST of CmoCh01G009310 vs. TAIR10
Match: AT1G53540.1 (AT1G53540.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 118.2 bits (295), Expect = 5.1e-27
Identity = 57/107 (53.27%), Postives = 82/107 (76.64%), Query Frame = 1


Query: 59  RVDWKETPERHVIMLDVPGLDRDELKIELDDENRVIKVMGERKREEEKQSDHWHRVERSY 118
           +VDW+ETPE HV   D+PGL ++E+K+E++D N ++++ GER  E E+++D WHRVERS 
Sbjct: 51  KVDWRETPEAHVFKADLPGLRKEEVKVEVEDGN-ILQISGERSNENEEKNDKWHRVERSS 110

Query: 119 GKFWRQFRVPRNADMESVRARLENGVLTVTLSKVSPEKVKDPKVVSI 166
           GKF R+FR+P NA ME ++A +ENGVL+VT+ KV PEK  + K + I
Sbjct: 111 GKFTRRFRLPENAKMEEIKASMENGVLSVTVPKV-PEKKPEVKSIDI 155

[Close]

BLAST of CmoCh01G009310 vs. TAIR10
Match: AT1G59860.1 (AT1G59860.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 116.3 bits (290), Expect = 2.0e-26
Identity = 65/140 (46.43%), Postives = 92/140 (65.71%), Query Frame = 1


Query: 30  FDPFGILEQTPFS---FQDENRDALQHPLQPTRVDWKETPERHVIMLDVPGLDRDELKIE 89
           FDPF +    PF    F   +  A+ +     RVDWKET E HV   D+PG+ ++E+K+E
Sbjct: 19  FDPFSLDVWDPFKELQFPSSSSSAIAN----ARVDWKETAEAHVFKADLPGMKKEEVKVE 78

Query: 90  LDDENRVIKVMGERKREEEKQSDHWHRVERSYGKFWRQFRVPRNADMESVRARLENGVLT 149
           ++D++ V+K+ GER  E+E++ D WHRVERS G F R+FR+P N  M+ V+A +ENGVLT
Sbjct: 79  IEDDS-VLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVLT 138

Query: 150 VTLSKVSPEKVKDPKVVSIE 167
           VT+ KV   K K  +V SI+
Sbjct: 139 VTVPKVETNK-KKAQVKSID 152

[Close]

BLAST of CmoCh01G009310 vs. NCBI nr
Match: gi|315932726|gb|ADU55793.1| (HSP20.3 [Citrullus lanatus])

HSP 1 Score: 231.9 bits (590), Expect = 9.0e-58
Identity = 119/171 (69.59%), Postives = 142/171 (83.04%), Query Frame = 1


Query: 7   KKAALLVFTLL----LLTSSTASPLPFFDPFGILEQTPFSF-QDENRDALQHPLQPTRVD 66
           K   L +F +     LLT S  S LPF DPFGILEQTPF   ++ENRDALQ PL P RVD
Sbjct: 5   KAVQLFLFAIFISSFLLTPSEPSLLPFIDPFGILEQTPFGLLENENRDALQQPLPPARVD 64

Query: 67  WKETPERHVIMLDVPGLDRDELKIELDDENRVIKVMGERKREEEKQSDHWHRVERSYGKF 126
           WKETPE HVIMLDVPG++++E+KIELD+ENR++KV+GERKREEEKQS+HWHR+ERSYGKF
Sbjct: 65  WKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLERSYGKF 124

Query: 127 WRQFRVPRNADMESVRARLENGVLTVTLSKVSPEKVKDPKVVSI--EEPRA 171
           WRQFR+P NADMESV+A+L+NGVL VTLSK+SPEK+K P+VV I  E+P A
Sbjct: 125 WRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPPA 175

[Close]

BLAST of CmoCh01G009310 vs. NCBI nr
Match: gi|659119141|ref|XP_008459498.1| (PREDICTED: 22.0 kDa class IV heat shock protein [Cucumis melo])

HSP 1 Score: 228.8 bits (582), Expect = 7.7e-57
Identity = 123/185 (66.49%), Postives = 148/185 (80.00%), Query Frame = 1


Query: 8   KAALLVFTLL-----LLTSSTASPLPFFDPFGILEQTPFSF-QDENRDALQH-PLQPTRV 67
           KA  L+F+ +     L+TSS  S LPF DPFGILEQTPF   ++EN+DALQ  PL P RV
Sbjct: 5   KAIQLIFSTVFIFAFLITSSQPSLLPFIDPFGILEQTPFGLLENENKDALQQQPLPPARV 64

Query: 68  DWKETPERHVIMLDVPGLDRDELKIELDDENRVIKVMGERKREEEKQSDHWHRVERSYGK 127
           DWKET E H IM+DVPG++++ELKIELD+ENRV+KV+GERKREEEKQSDHWHR+ERSYGK
Sbjct: 65  DWKETAESHEIMVDVPGMNKEELKIELDEENRVLKVIGERKREEEKQSDHWHRLERSYGK 124

Query: 128 FWRQFRVPRNADMESVRARLENGVLTVTLSKVSPEKVKDPKVVSI---EEPRAEQAKLGG 183
           FWRQ R+P NAD+ESV+A+LENGVL +TLSK+SPEK+K P+VV I   + P  E  K G 
Sbjct: 125 FWRQLRLPVNADLESVKAKLENGVLKITLSKLSPEKIKGPRVVGILDEQPPAGEINKSGA 184

[Close]

BLAST of CmoCh01G009310 vs. NCBI nr
Match: gi|449447525|ref|XP_004141518.1| (PREDICTED: 22.0 kDa class IV heat shock protein [Cucumis sativus])

HSP 1 Score: 222.2 bits (565), Expect = 7.2e-55
Identity = 120/185 (64.86%), Postives = 145/185 (78.38%), Query Frame = 1


Query: 8   KAALLVFTLL-----LLTSSTASPLPFFDPFGILEQTPFSF-QDENRDALQH-PLQPTRV 67
           KA  L+F+ +     LLTSS  S LPF DPFGILEQTPF   ++EN+D LQ  PL P RV
Sbjct: 5   KAIQLIFSTIFIFAFLLTSSHPSLLPFIDPFGILEQTPFGLLENENKDVLQQQPLPPARV 64

Query: 68  DWKETPERHVIMLDVPGLDRDELKIELDDENRVIKVMGERKREEEKQSDHWHRVERSYGK 127
           DWKET E H IM+DVPG++++ELKIELD+ENRV+KV+GERKREEEKQSDHWHR+ERSYGK
Sbjct: 65  DWKETAESHEIMVDVPGMNKEELKIELDEENRVLKVIGERKREEEKQSDHWHRLERSYGK 124

Query: 128 FWRQFRVPRNADMESVRARLENGVLTVTLSKVSPEKVKDPKVVSI---EEPRAEQAKLGG 183
           FWRQ R+P NAD+ESV+A+LENGVL ++L K+S EK+K P+VV I   + P  E  K G 
Sbjct: 125 FWRQLRLPVNADLESVKAKLENGVLKISLLKLSQEKIKGPRVVGILDEQPPAGEMNKSGA 184

[Close]

BLAST of CmoCh01G009310 vs. NCBI nr
Match: gi|593686502|ref|XP_007143922.1| (hypothetical protein PHAVU_007G113700g [Phaseolus vulgaris])

HSP 1 Score: 199.5 bits (506), Expect = 5.0e-48
Identity = 108/190 (56.84%), Postives = 137/190 (72.11%), Query Frame = 1


Query: 11  LLVFTLLLLTSSTASPLPFFDP----------------FGILEQTPFSFQDENRDALQHP 70
           +L   LLL+T +  S LPF DP                F +LEQ PF  + + +  +   
Sbjct: 7   ILFLLLLLVTKANGSLLPFIDPPRGVLAELLSDRFPDPFHVLEQIPFGVEKDEQSMV--- 66

Query: 71  LQPTRVDWKETPERHVIMLDVPGLDRDELKIELDDENRVIKVMGERKREEEKQSDHWHRV 130
           + P RVDWKETPE HV+MLDVPG+ R+E+KIE++ ENRV++V GERKREEEK+ DHWHRV
Sbjct: 67  MSPARVDWKETPEGHVMMLDVPGMKREEIKIEVE-ENRVLRVSGERKREEEKKGDHWHRV 126

Query: 131 ERSYGKFWRQFRVPRNADMESVRARLENGVLTVTLSKVSPEKVKDPKVVSIEEPRAEQAK 183
           ERSYGKFWRQFR+P+N D++SV+A+LENGVLT+TL K+SPEK+K P+VVSI     +QAK
Sbjct: 127 ERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLDKLSPEKIKGPRVVSIAGEDQQQAK 186

[Close]

BLAST of CmoCh01G009310 vs. NCBI nr
Match: gi|255557799|ref|XP_002519929.1| (PREDICTED: 22.0 kDa class IV heat shock protein isoform X1 [Ricinus communis])

HSP 1 Score: 190.3 bits (482), Expect = 3.0e-45
Identity = 109/185 (58.92%), Postives = 133/185 (71.89%), Query Frame = 1


Query: 14  FTLLLLTSSTASPLPFFD------------PFGILEQTPFSFQDENRDALQHPLQPTRVD 73
           F LLL + S AS LPF D            PF +LEQ PF    ++  AL     P RVD
Sbjct: 13  FLLLLWSPSNASLLPFVDRPGSLLTDFWSDPFRVLEQIPFGIDRDDNVALS----PARVD 72

Query: 74  WKETPERHVIMLDVPGLDRDELKIELDDENRVIKVMGERKREEEKQSDHWHRVERSYGKF 133
           WKETPE H+IMLDVPGL ++ELKIEL  ENRV++V GERK+EEEK+ D WHRVERSYGKF
Sbjct: 73  WKETPESHMIMLDVPGLKKEELKIELL-ENRVLRVSGERKKEEEKKGDQWHRVERSYGKF 132

Query: 134 WRQFRVPRNADMESVRARLENGVLTVTLSKVSPEKVKDPKVVSI--EEPRAEQAKL--GG 183
           WRQFR+P N D++SV+A+LENGVLT++L+K+SP+K+K P+VVSI  EE + E  KL    
Sbjct: 133 WRQFRLPDNVDLDSVKAKLENGVLTLSLNKLSPDKIKGPRVVSIAGEEEKPEPVKLNSNN 192

The following BLAST results are available for this feature:

BLAST of CmoCh01G009310 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HSP41_SOYBN	3.2e-47	55.03	22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1	[more]
HSP22_ARATH	4.8e-43	58.82	22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1	[more]
HSP41_PEA	5.3e-42	57.14	22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1	[more]
HS232_ORYSJ	1.1e-31	40.10	23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2	[more]
HSP11_MEDSA	8.8e-29	50.71	18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=...	[more]

BLAST of CmoCh01G009310 vs. TrEMBL


Match Name	E-value	Identity	Description
H6TB46_CITLA	6.3e-58	69.59	HSP20.3 OS=Citrullus lanatus PE=2 SV=1	[more]
A0A0A0KSN3_CUCSA	5.0e-55	64.86	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G646740 PE=3 SV=1	[more]
V7BHH5_PHAVU	3.5e-48	56.84	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G113700g PE=3 SV=1	[more]
A0A151U5N6_CAJCA	2.1e-45	54.97	22.0 kDa class IV heat shock protein OS=Cajanus cajan GN=KK1_007286 PE=3 SV=1	[more]
B9S1R4_RICCO	2.1e-45	58.92	Heat-shock protein, putative OS=Ricinus communis GN=RCOM_0867440 PE=3 SV=1	[more]

BLAST of CmoCh01G009310 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G10250.1	2.7e-44	58.82	HSP20-like chaperones superfamily protein	[more]
AT5G59720.1	7.9e-28	56.48	heat shock protein 18.2	[more]
AT3G46230.1	5.1e-27	53.70	heat shock protein 17.4	[more]
AT1G53540.1	5.1e-27	53.27	HSP20-like chaperones superfamily protein	[more]
AT1G59860.1	2.0e-26	46.43	HSP20-like chaperones superfamily protein	[more]

BLAST of CmoCh01G009310 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|315932726\|gb\|ADU55793.1\|	9.0e-58	69.59	HSP20.3 [Citrullus lanatus]	[more]
gi\|659119141\|ref\|XP_008459498.1\|	7.7e-57	66.49	PREDICTED: 22.0 kDa class IV heat shock protein [Cucumis melo]	[more]
gi\|449447525\|ref\|XP_004141518.1\|	7.2e-55	64.86	PREDICTED: 22.0 kDa class IV heat shock protein [Cucumis sativus]	[more]
gi\|593686502\|ref\|XP_007143922.1\|	5.0e-48	56.84	hypothetical protein PHAVU_007G113700g [Phaseolus vulgaris]	[more]
gi\|255557799\|ref\|XP_002519929.1\|	3.0e-45	58.92	PREDICTED: 22.0 kDa class IV heat shock protein isoform X1 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009628	response to abiotic stimulus
biological_process	GO:0006950	response to stress
biological_process	GO:0050896	response to stimulus
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005783	endoplasmic reticulum
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G009310.1	CmoCh01G009310.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 61..165 score: 5.0
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 61..151 score: 23
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 37..166 score: 1.7
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 50..162 score: 2.01
None	No IPR available	PANTHER	PTHR11527:SF135	22.0 KDA HEAT SHOCK PROTEIN	coord: 29..173 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G009310	Cucsa.237830	Cucumber (Gy14) v1	cgycmoB0661
CmoCh01G009310	CmaCh01G008860	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G009310	Cp4.1LG02g09750	Cucurbita pepo (Zucchini)	cmocpeB448
CmoCh01G009310	Cla97C08G145950	Watermelon (97103) v2	cmowmbB481
CmoCh01G009310	Bhi06G000116	Wax gourd	cmowgoB0553

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G009310	Cucurbita moschata (Rifu)	cmocmoB024
CmoCh01G009310	Cucurbita maxima (Rimu)	cmacmoB046
CmoCh01G009310	Cucurbita maxima (Rimu)	cmacmoB056
CmoCh01G009310	Wild cucumber (PI 183967)	cmocpiB476
CmoCh01G009310	Cucumber (Chinese Long) v2	cmocuB472
CmoCh01G009310	Melon (DHL92) v3.5.1	cmomeB375
CmoCh01G009310	Watermelon (Charleston Gray)	cmowcgB429
CmoCh01G009310	Watermelon (97103) v1	cmowmB411
CmoCh01G009310	Cucurbita pepo (Zucchini)	cmocpeB468
CmoCh01G009310	Bottle gourd (USVL1VR-Ls)	cmolsiB440
CmoCh01G009310	Cucumber (Gy14) v2	cgybcmoB611
CmoCh01G009310	Cucumber (Gy14) v2	cgybcmoB753
CmoCh01G009310	Melon (DHL92) v3.6.1	cmomedB431
CmoCh01G009310	Cucumber (Chinese Long) v3	cmocucB0565