CmoCh01G008950 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G008950
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	(Dehydration responsive element binding transcription factor) (Ethylene-responsive transcription factor)
Location	Cmo_Chr01 : 4978025 .. 4978537 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGACACGGCGCGGCAACGTCGATCTACCGAGGAGTTCGCAAGCGTAAATGGGGCAAATGGGTGTCCGAGATTCGCGAACCGGGAAAGAAGACGAGAATATGGTTAGGTAGCTTCGAGACACCGGAGATGGCAGCGGCAGCCTACGACGTTGCTGCCTACCATTTCCGTGGTCGCGACGCACGTCTCAATTTCCCTAATCTTGTCGACTCTCTTCCCTTACCTCTTGGTTCTTCCTCTGATGACATCCGCCTTGCTGCTCACGAGGGAGCGTTGCGATTACGAACAACGCCAACCGTTGTGCCTGAGAGAAATGGAACCGGTGGGTTGGGACTGGCCCCGGTCACAGTGCGGTTATCGCCGAGCCAAATTCAGGCGATTAACGAGTCGCCGTTGGATTCGCCGAAGATGTGGATGCAAATGTCGTCGGAGAGTTTGGTGATGGAGGAGTATTCAAATGAGGATGAAATGTGGGAGAATATGCAGAATGATTCGCTGTGGGATCCTTAG

mRNA sequence

ATGGGGAGACACGGCGCGGCAACGTCGATCTACCGAGGAGTTCGCAAGCGTAAATGGGGCAAATGGGTGTCCGAGATTCGCGAACCGGGAAAGAAGACGAGAATATGGTTAGGTAGCTTCGAGACACCGGAGATGGCAGCGGCAGCCTACGACGTTGCTGCCTACCATTTCCGTGGTCGCGACGCACGTCTCAATTTCCCTAATCTTGTCGACTCTCTTCCCTTACCTCTTGGTTCTTCCTCTGATGACATCCGCCTTGCTGCTCACGAGGGAGCGTTGCGATTACGAACAACGCCAACCGTTGTGCCTGAGAGAAATGGAACCGGTGGGTTGGGACTGGCCCCGGTCACAGTGCGGTTATCGCCGAGCCAAATTCAGGCGATTAACGAGTCGCCGTTGGATTCGCCGAAGATGTGGATGCAAATGTCGTCGGAGAGTTTGGTGATGGAGGAGTATTCAAATGAGGATGAAATGTGGGAGAATATGCAGAATGATTCGCTGTGGGATCCTTAG

Coding sequence (CDS)

ATGGGGAGACACGGCGCGGCAACGTCGATCTACCGAGGAGTTCGCAAGCGTAAATGGGGCAAATGGGTGTCCGAGATTCGCGAACCGGGAAAGAAGACGAGAATATGGTTAGGTAGCTTCGAGACACCGGAGATGGCAGCGGCAGCCTACGACGTTGCTGCCTACCATTTCCGTGGTCGCGACGCACGTCTCAATTTCCCTAATCTTGTCGACTCTCTTCCCTTACCTCTTGGTTCTTCCTCTGATGACATCCGCCTTGCTGCTCACGAGGGAGCGTTGCGATTACGAACAACGCCAACCGTTGTGCCTGAGAGAAATGGAACCGGTGGGTTGGGACTGGCCCCGGTCACAGTGCGGTTATCGCCGAGCCAAATTCAGGCGATTAACGAGTCGCCGTTGGATTCGCCGAAGATGTGGATGCAAATGTCGTCGGAGAGTTTGGTGATGGAGGAGTATTCAAATGAGGATGAAATGTGGGAGAATATGCAGAATGATTCGCTGTGGGATCCTTAG

Homology

[Close]

BLAST of CmoCh01G008950 vs. Swiss-Prot
Match: ERF21_ARATH (Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana GN=ERF021 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.5e-46
Identity = 100/165 (60.61%), Postives = 115/165 (69.70%), Query Frame = 1


Query: 9   SIYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGRDARLNFPN 68
           S YRGVRKRKWGKWVSEIREPG K RIWLGSFETPEMAA AYDVAA+HFRGR+ARLNFP 
Sbjct: 22  SAYRGVRKRKWGKWVSEIREPGTKNRIWLGSFETPEMAATAYDVAAFHFRGREARLNFPE 81

Query: 69  LVDSLPLPLGSSSDDIRLAAHEGALRLRTTPT-VVPERNGTGGLGLAPVTVRLSPSQIQA 128
           L  SLP P  SSSD IR+A HE  L   T  T    + + +    +AP  VRLSP +IQA
Sbjct: 82  LASSLPRPADSSSDSIRMAVHEATLCRTTEGTESAMQVDSSSSSNVAPTMVRLSPREIQA 141

Query: 129 INESPLDSPKMWMQMSSESLVMEEYSNEDEM--WENMQNDSLWDP 171
           INES L SP   M  + + +   E++N+ EM  WE  Q+D LWDP
Sbjct: 142 INESTLGSPTTMMHSTYDPM---EFANDVEMNAWETYQSDFLWDP 183

[Close]

BLAST of CmoCh01G008950 vs. Swiss-Prot
Match: ERF22_ARATH (Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana GN=ERF022 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.4e-39
Identity = 95/166 (57.23%), Postives = 110/166 (66.27%), Query Frame = 1


Query: 11  YRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGRDARLNFPNLV 70
           YRG+R+RKWGKWVSEIREPGKKTRIWLGS+ET EMAAAAYD AA H RGR   LNFP LV
Sbjct: 20  YRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPELV 79

Query: 71  DSLPLPLGSSSDDIRLAAHEGALRLRTTPTVVPERNGTGGLGLAPVTVRLSPSQIQAINE 130
           DS P P  SSS+ I+ AA + AL  +  P  + E     G GL+   V LSP QIQAINE
Sbjct: 80  DSFPRPESSSSEHIQAAAQDAALMFK--PGRLSEPALESGQGLS--RVGLSPDQIQAINE 139

Query: 131 SPLDSPKM-WMQMSSESLVMEEYS------NEDEMWENMQNDSLWD 170
           SPLDSP+M WMQ    +   E Y       + DE +E  Q  S+W+
Sbjct: 140 SPLDSPRMGWMQDLEVADYEELYGQFFGQHDRDEFFEMQQFQSIWN 181

[Close]

BLAST of CmoCh01G008950 vs. Swiss-Prot
Match: ERF23_ARATH (Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana GN=ERF023 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.6e-24
Identity = 52/83 (62.65%), Postives = 64/83 (77.11%), Query Frame = 1


Query: 10  IYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGRDARLNFPNL 69
           +Y GVRKR+WGKWVSEIREP KK+RIWLGSF  PEMAA AYDVAA+  +GR A+LNFP  
Sbjct: 44  VYHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPEE 103

Query: 70  VDSLPLPLGSSSDDIRLAAHEGA 93
           ++ LP P   +  DI++AA + A
Sbjct: 104 IEDLPRPSTCTPRDIQVAAAKAA 126

[Close]

BLAST of CmoCh01G008950 vs. Swiss-Prot
Match: DREB3_ARATH (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB3 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.7e-24
Identity = 57/97 (58.76%), Postives = 65/97 (67.01%), Query Frame = 1


Query: 2   GRHGAATSIYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGRD 61
           GR      +YRGVR R WGKWVSEIREP KK+RIWLG+F TPEMAA A+DVAA   +G  
Sbjct: 42  GRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTA 101

Query: 62  ARLNFPNLVDSLPLPLGSSSDDIRLAAHEGALRLRTT 99
           A LNFP L DS P P+  S  DI+ AA + A    TT
Sbjct: 102 AILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTT 138

[Close]

BLAST of CmoCh01G008950 vs. Swiss-Prot
Match: TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 5.2e-23
Identity = 52/83 (62.65%), Postives = 62/83 (74.70%), Query Frame = 1


Query: 10  IYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGRDARLNFPNL 69
           +YRGVRKR WGKWVSEIREP KK+RIWLG+F +PEMAA A+DVAA   +G  A LNFP+L
Sbjct: 35  VYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPDL 94

Query: 70  VDSLPLPLGSSSDDIRLAAHEGA 93
             S P P   S  DI++AA + A
Sbjct: 95  AGSFPRPSSLSPRDIQVAALKAA 117

[Close]

BLAST of CmoCh01G008950 vs. TrEMBL
Match: A0A0A0KXW9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G649890 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.0e-69
Identity = 142/186 (76.34%), Postives = 151/186 (81.18%), Query Frame = 1


Query: 1   MGRHGAATSIYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGR 60
           M  HGAATS YRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAA AYDVAAYHFRGR
Sbjct: 7   MRSHGAATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAATAYDVAAYHFRGR 66

Query: 61  DARLNFPNLVDSLPLPLGSSSDDIRLAAHEGALRLRTTPTVVPERNGTGG----LGLAPV 120
           DARLNFP+LV+SLP PL S+ DDIRLAAHE ALR+RTTP V    +  G     LGLAPV
Sbjct: 67  DARLNFPHLVNSLPFPLSSTPDDIRLAAHEAALRVRTTPVVASSDDQLGDETSTLGLAPV 126

Query: 121 TVRLSPSQIQAINESPLDSPKMWMQMSSESLVM-EEYSN-----------EDEMWENMQN 171
           TVRLSPSQIQAINES LDSPKMWMQMSSESL+M +E+SN            D+MWENM N
Sbjct: 127 TVRLSPSQIQAINESTLDSPKMWMQMSSESLLMDQEFSNGNVFVDHDMQDYDQMWENMHN 186

[Close]

BLAST of CmoCh01G008950 vs. TrEMBL
Match: M5XFS1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012354mg PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.1e-61
Identity = 122/167 (73.05%), Postives = 138/167 (82.63%), Query Frame = 1


Query: 4   HGAATSIYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGRDAR 63
           +GAATS YRGVRKRKWGKWVSEIREPG KTRIWLGSFETPEMAAAAYDVAA HFRGR+AR
Sbjct: 10  YGAATSSYRGVRKRKWGKWVSEIREPGTKTRIWLGSFETPEMAAAAYDVAALHFRGREAR 69

Query: 64  LNFPNLVDSLPLPLGSSSDDIRLAAHEGALRLRTTPTVVPERNGTGGLGLAPVTVRLSPS 123
           LNFP LV+SLP P  S+++DIR+AAHE ALRLR++P       G+    + PVTVRLSPS
Sbjct: 70  LNFPELVNSLPRPASSNAEDIRMAAHEAALRLRSSPAAEAHEAGSSSSNVGPVTVRLSPS 129

Query: 124 QIQAINESPLDSPKMWMQMSSESLVMEEYSNEDEMWENMQNDSLWDP 171
           QIQAINESPLDSPKMWMQM SES++       ++ WE+MQNDSLWDP
Sbjct: 130 QIQAINESPLDSPKMWMQM-SESMMFS--GGFEDQWEDMQNDSLWDP 173

[Close]

BLAST of CmoCh01G008950 vs. TrEMBL
Match: A0A0R0LM85_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G231200 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.0e-58
Identity = 115/174 (66.09%), Postives = 133/174 (76.44%), Query Frame = 1


Query: 5   GAATSIYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGRDARL 64
           GAA+S YRGVRKRKWGKWVSEIREPG KTRIWLGSFETPEMAAAAYDVAA HFRGRDARL
Sbjct: 11  GAASSAYRGVRKRKWGKWVSEIREPGTKTRIWLGSFETPEMAAAAYDVAALHFRGRDARL 70

Query: 65  NFPNLVDSLPLPLGSSSDDIRLAAHEGALRLRTTPTVVPERNGTGGLGLAPVTVRLSPSQ 124
           NFP L  +LP P+ +++D IR+AAH+ ALRLRT P         G    AP+TVRLSP+Q
Sbjct: 71  NFPELASTLPRPVSNNADHIRMAAHQAALRLRTNPAAPDTAGSAGSSSSAPLTVRLSPTQ 130

Query: 125 IQAINESPLDSPKMWMQMSSESLVMEE--------YSNEDEMWENMQNDSLWDP 171
           IQAIN+SP+DSP+ WMQM    ++ ++        YS ED  WE+MQNDSLWDP
Sbjct: 131 IQAINDSPMDSPQTWMQMPDTFMMHDQSMMFASNGYSFEDNEWEHMQNDSLWDP 184

[Close]

BLAST of CmoCh01G008950 vs. TrEMBL
Match: I1LG45_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2)

HSP 1 Score: 233.4 bits (594), Expect = 2.0e-58
Identity = 115/173 (66.47%), Postives = 133/173 (76.88%), Query Frame = 1


Query: 5   GAATSIYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGRDARL 64
           GAA+S YRGVRKRKWGKWVSEIREPG KTRIWLGSFETPEMAAAAYDVAA HFRGRDARL
Sbjct: 13  GAASSAYRGVRKRKWGKWVSEIREPGTKTRIWLGSFETPEMAAAAYDVAALHFRGRDARL 72

Query: 65  NFPNLVDSLPLPLGSSSDDIRLAAHEGALRLRTTPTVVPERNGTGGLGLAPVTVRLSPSQ 124
           NFP L  +LP P+ +++D IR+AAHE ALRLRT P         G +  AP+TVRLSP+Q
Sbjct: 73  NFPELASTLPRPVSNNADHIRMAAHEAALRLRTNPAAPNTVGSAGSVSAAPLTVRLSPTQ 132

Query: 125 IQAINESPLDSPKMWMQMSSESLVMEE-------YSNEDEMWENMQNDSLWDP 171
           IQAIN+SP+DSP+ WMQM    ++ ++       YS ED  WE+M NDSLWDP
Sbjct: 133 IQAINDSPMDSPQTWMQMPDTFMMHDQSMMFANGYSFEDNEWEDMHNDSLWDP 185

[Close]

BLAST of CmoCh01G008950 vs. TrEMBL
Match: A0A0R0HAI8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G014200 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.0e-58
Identity = 115/173 (66.47%), Postives = 133/173 (76.88%), Query Frame = 1


Query: 5   GAATSIYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGRDARL 64
           GAA+S YRGVRKRKWGKWVSEIREPG KTRIWLGSFETPEMAAAAYDVAA HFRGRDARL
Sbjct: 11  GAASSAYRGVRKRKWGKWVSEIREPGTKTRIWLGSFETPEMAAAAYDVAALHFRGRDARL 70

Query: 65  NFPNLVDSLPLPLGSSSDDIRLAAHEGALRLRTTPTVVPERNGTGGLGLAPVTVRLSPSQ 124
           NFP L  +LP P+ +++D IR+AAHE ALRLRT P         G +  AP+TVRLSP+Q
Sbjct: 71  NFPELASTLPRPVSNNADHIRMAAHEAALRLRTNPAAPNTVGSAGSVSAAPLTVRLSPTQ 130

Query: 125 IQAINESPLDSPKMWMQMSSESLVMEE-------YSNEDEMWENMQNDSLWDP 171
           IQAIN+SP+DSP+ WMQM    ++ ++       YS ED  WE+M NDSLWDP
Sbjct: 131 IQAINDSPMDSPQTWMQMPDTFMMHDQSMMFANGYSFEDNEWEDMHNDSLWDP 183

[Close]

BLAST of CmoCh01G008950 vs. TAIR10
Match: AT1G71450.1 (AT1G71450.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 186.4 bits (472), Expect = 1.4e-47
Identity = 100/165 (60.61%), Postives = 115/165 (69.70%), Query Frame = 1


Query: 9   SIYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGRDARLNFPN 68
           S YRGVRKRKWGKWVSEIREPG K RIWLGSFETPEMAA AYDVAA+HFRGR+ARLNFP 
Sbjct: 22  SAYRGVRKRKWGKWVSEIREPGTKNRIWLGSFETPEMAATAYDVAAFHFRGREARLNFPE 81

Query: 69  LVDSLPLPLGSSSDDIRLAAHEGALRLRTTPT-VVPERNGTGGLGLAPVTVRLSPSQIQA 128
           L  SLP P  SSSD IR+A HE  L   T  T    + + +    +AP  VRLSP +IQA
Sbjct: 82  LASSLPRPADSSSDSIRMAVHEATLCRTTEGTESAMQVDSSSSSNVAPTMVRLSPREIQA 141

Query: 129 INESPLDSPKMWMQMSSESLVMEEYSNEDEM--WENMQNDSLWDP 171
           INES L SP   M  + + +   E++N+ EM  WE  Q+D LWDP
Sbjct: 142 INESTLGSPTTMMHSTYDPM---EFANDVEMNAWETYQSDFLWDP 183

[Close]

BLAST of CmoCh01G008950 vs. TAIR10
Match: AT1G33760.1 (AT1G33760.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 164.1 bits (414), Expect = 7.6e-41
Identity = 95/166 (57.23%), Postives = 110/166 (66.27%), Query Frame = 1


Query: 11  YRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGRDARLNFPNLV 70
           YRG+R+RKWGKWVSEIREPGKKTRIWLGS+ET EMAAAAYD AA H RGR   LNFP LV
Sbjct: 20  YRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPELV 79

Query: 71  DSLPLPLGSSSDDIRLAAHEGALRLRTTPTVVPERNGTGGLGLAPVTVRLSPSQIQAINE 130
           DS P P  SSS+ I+ AA + AL  +  P  + E     G GL+   V LSP QIQAINE
Sbjct: 80  DSFPRPESSSSEHIQAAAQDAALMFK--PGRLSEPALESGQGLS--RVGLSPDQIQAINE 139

Query: 131 SPLDSPKM-WMQMSSESLVMEEYS------NEDEMWENMQNDSLWD 170
           SPLDSP+M WMQ    +   E Y       + DE +E  Q  S+W+
Sbjct: 140 SPLDSPRMGWMQDLEVADYEELYGQFFGQHDRDEFFEMQQFQSIWN 181

[Close]

BLAST of CmoCh01G008950 vs. TAIR10
Match: AT1G01250.1 (AT1G01250.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 112.8 bits (281), Expect = 2.0e-25
Identity = 52/83 (62.65%), Postives = 64/83 (77.11%), Query Frame = 1


Query: 10  IYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGRDARLNFPNL 69
           +Y GVRKR+WGKWVSEIREP KK+RIWLGSF  PEMAA AYDVAA+  +GR A+LNFP  
Sbjct: 44  VYHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPEE 103

Query: 70  VDSLPLPLGSSSDDIRLAAHEGA 93
           ++ LP P   +  DI++AA + A
Sbjct: 104 IEDLPRPSTCTPRDIQVAAAKAA 126

[Close]

BLAST of CmoCh01G008950 vs. TAIR10
Match: AT5G11590.1 (AT5G11590.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 112.5 bits (280), Expect = 2.6e-25
Identity = 57/97 (58.76%), Postives = 65/97 (67.01%), Query Frame = 1


Query: 2   GRHGAATSIYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGRD 61
           GR      +YRGVR R WGKWVSEIREP KK+RIWLG+F TPEMAA A+DVAA   +G  
Sbjct: 42  GRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTA 101

Query: 62  ARLNFPNLVDSLPLPLGSSSDDIRLAAHEGALRLRTT 99
           A LNFP L DS P P+  S  DI+ AA + A    TT
Sbjct: 102 AILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTT 138

[Close]

BLAST of CmoCh01G008950 vs. TAIR10
Match: AT5G25810.1 (AT5G25810.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 109.0 bits (271), Expect = 2.9e-24
Identity = 52/83 (62.65%), Postives = 62/83 (74.70%), Query Frame = 1


Query: 10  IYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGRDARLNFPNL 69
           +YRGVRKR WGKWVSEIREP KK+RIWLG+F +PEMAA A+DVAA   +G  A LNFP+L
Sbjct: 35  VYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPDL 94

Query: 70  VDSLPLPLGSSSDDIRLAAHEGA 93
             S P P   S  DI++AA + A
Sbjct: 95  AGSFPRPSSLSPRDIQVAALKAA 117

[Close]

BLAST of CmoCh01G008950 vs. NCBI nr
Match: gi|659119342|ref|XP_008459604.1| (PREDICTED: ethylene-responsive transcription factor ERF021 [Cucumis melo])

HSP 1 Score: 273.5 bits (698), Expect = 2.5e-70
Identity = 142/182 (78.02%), Postives = 151/182 (82.97%), Query Frame = 1


Query: 1   MGRHGAATSIYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGR 60
           M  HGAATS YRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAA AYDVAAYHFRGR
Sbjct: 7   MRSHGAATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAATAYDVAAYHFRGR 66

Query: 61  DARLNFPNLVDSLPLPLGSSSDDIRLAAHEGALRLRTTPTVVPERNG--TGGLGLAPVTV 120
           DARLNFP+LV+SLP PL S+ DDIRLAAHE ALR+RTTP V     G  T  LGLAPVTV
Sbjct: 67  DARLNFPHLVNSLPFPLSSTPDDIRLAAHEAALRVRTTPAVASSELGDETSTLGLAPVTV 126

Query: 121 RLSPSQIQAINESPLDSPKMWMQMSSESLVM-EEYSN---------EDEMWENMQNDSLW 171
           RLSPSQIQAINES LDSP MWMQMSSES++M +E+SN         +DEMWENM NDSLW
Sbjct: 127 RLSPSQIQAINESTLDSPNMWMQMSSESMLMDQEFSNGNVFVDDMQDDEMWENMHNDSLW 186

[Close]

BLAST of CmoCh01G008950 vs. NCBI nr
Match: gi|449447759|ref|XP_004141635.1| (PREDICTED: ethylene-responsive transcription factor ERF021 [Cucumis sativus])

HSP 1 Score: 270.0 bits (689), Expect = 2.8e-69
Identity = 142/186 (76.34%), Postives = 151/186 (81.18%), Query Frame = 1


Query: 1   MGRHGAATSIYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGR 60
           M  HGAATS YRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAA AYDVAAYHFRGR
Sbjct: 7   MRSHGAATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAATAYDVAAYHFRGR 66

Query: 61  DARLNFPNLVDSLPLPLGSSSDDIRLAAHEGALRLRTTPTVVPERNGTGG----LGLAPV 120
           DARLNFP+LV+SLP PL S+ DDIRLAAHE ALR+RTTP V    +  G     LGLAPV
Sbjct: 67  DARLNFPHLVNSLPFPLSSTPDDIRLAAHEAALRVRTTPVVASSDDQLGDETSTLGLAPV 126

Query: 121 TVRLSPSQIQAINESPLDSPKMWMQMSSESLVM-EEYSN-----------EDEMWENMQN 171
           TVRLSPSQIQAINES LDSPKMWMQMSSESL+M +E+SN            D+MWENM N
Sbjct: 127 TVRLSPSQIQAINESTLDSPKMWMQMSSESLLMDQEFSNGNVFVDHDMQDYDQMWENMHN 186

[Close]

BLAST of CmoCh01G008950 vs. NCBI nr
Match: gi|1009137382|ref|XP_015886023.1| (PREDICTED: ethylene-responsive transcription factor ERF021-like [Ziziphus jujuba])

HSP 1 Score: 245.7 bits (626), Expect = 5.7e-62
Identity = 124/177 (70.06%), Postives = 140/177 (79.10%), Query Frame = 1


Query: 5   GAATSIYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGRDARL 64
           GAATS+YRGVRKRKWGKWVSEIREPG KTRIWLGSFETPEMAAAAYDVAA HFRGRDARL
Sbjct: 13  GAATSVYRGVRKRKWGKWVSEIREPGTKTRIWLGSFETPEMAAAAYDVAALHFRGRDARL 72

Query: 65  NFPNLVDSLPLPLGSSSDDIRLAAHEGALRLRTTPT------VVPERNGTGGLGLAPVTV 124
           NFP LV+SLP PL S+ DD+R+AAHE ALRLR++        V      + G  + P+TV
Sbjct: 73  NFPQLVNSLPKPLSSNPDDVRMAAHEAALRLRSSSASPVVADVADYGGSSSGSNMGPITV 132

Query: 125 RLSPSQIQAINESPLDSPKMWMQMS-----SESLVMEEYSNEDEMWENMQNDSLWDP 171
           RLSPSQIQAINESPLDSPKMWMQM+      ESL+    +NE+  WE+MQN+SLWDP
Sbjct: 133 RLSPSQIQAINESPLDSPKMWMQMAEALTMEESLMFSNETNEENEWEDMQNESLWDP 189

[Close]

BLAST of CmoCh01G008950 vs. NCBI nr
Match: gi|645224416|ref|XP_008219098.1| (PREDICTED: ethylene-responsive transcription factor ERF021-like [Prunus mume])

HSP 1 Score: 244.2 bits (622), Expect = 1.6e-61
Identity = 122/167 (73.05%), Postives = 138/167 (82.63%), Query Frame = 1


Query: 4   HGAATSIYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGRDAR 63
           +GAATS YRGVRKRKWGKWVSEIREPG KTRIWLGSFETPEMAAAAYDVAA HFRGR+AR
Sbjct: 10  YGAATSSYRGVRKRKWGKWVSEIREPGTKTRIWLGSFETPEMAAAAYDVAALHFRGREAR 69

Query: 64  LNFPNLVDSLPLPLGSSSDDIRLAAHEGALRLRTTPTVVPERNGTGGLGLAPVTVRLSPS 123
           LNFP LV+SLP P  S+++DIR+AAHE ALRLR++P       G+    + PVTVRLSPS
Sbjct: 70  LNFPELVNSLPRPASSNAEDIRMAAHEAALRLRSSPAAEAHEAGSSSSNVGPVTVRLSPS 129

Query: 124 QIQAINESPLDSPKMWMQMSSESLVMEEYSNEDEMWENMQNDSLWDP 171
           QIQAINESPLDSPKMWMQM SES++       ++ WE+MQNDSLWDP
Sbjct: 130 QIQAINESPLDSPKMWMQM-SESMMFS--GGFEDQWEDMQNDSLWDP 173

[Close]

BLAST of CmoCh01G008950 vs. NCBI nr
Match: gi|596196504|ref|XP_007223585.1| (hypothetical protein PRUPE_ppa012354mg [Prunus persica])

HSP 1 Score: 244.2 bits (622), Expect = 1.6e-61
Identity = 122/167 (73.05%), Postives = 138/167 (82.63%), Query Frame = 1


Query: 4   HGAATSIYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGRDAR 63
           +GAATS YRGVRKRKWGKWVSEIREPG KTRIWLGSFETPEMAAAAYDVAA HFRGR+AR
Sbjct: 10  YGAATSSYRGVRKRKWGKWVSEIREPGTKTRIWLGSFETPEMAAAAYDVAALHFRGREAR 69

Query: 64  LNFPNLVDSLPLPLGSSSDDIRLAAHEGALRLRTTPTVVPERNGTGGLGLAPVTVRLSPS 123
           LNFP LV+SLP P  S+++DIR+AAHE ALRLR++P       G+    + PVTVRLSPS
Sbjct: 70  LNFPELVNSLPRPASSNAEDIRMAAHEAALRLRSSPAAEAHEAGSSSSNVGPVTVRLSPS 129

Query: 124 QIQAINESPLDSPKMWMQMSSESLVMEEYSNEDEMWENMQNDSLWDP 171
           QIQAINESPLDSPKMWMQM SES++       ++ WE+MQNDSLWDP
Sbjct: 130 QIQAINESPLDSPKMWMQM-SESMMFS--GGFEDQWEDMQNDSLWDP 173

The following BLAST results are available for this feature:

BLAST of CmoCh01G008950 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERF21_ARATH	2.5e-46	60.61	Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana GN=ERF02...	[more]
ERF22_ARATH	1.4e-39	57.23	Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana GN=ERF02...	[more]
ERF23_ARATH	3.6e-24	62.65	Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana GN=ERF02...	[more]
DREB3_ARATH	4.7e-24	58.76	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB...	[more]
TINY_ARATH	5.2e-23	62.65	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE...	[more]

BLAST of CmoCh01G008950 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXW9_CUCSA	2.0e-69	76.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G649890 PE=4 SV=1	[more]
M5XFS1_PRUPE	1.1e-61	73.05	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012354mg PE=4 SV=1	[more]
A0A0R0LM85_SOYBN	2.0e-58	66.09	Uncharacterized protein OS=Glycine max GN=GLYMA_01G231200 PE=4 SV=1	[more]
I1LG45_SOYBN	2.0e-58	66.47	Uncharacterized protein OS=Glycine max PE=4 SV=2	[more]
A0A0R0HAI8_SOYBN	2.0e-58	66.47	Uncharacterized protein OS=Glycine max GN=GLYMA_11G014200 PE=4 SV=1	[more]

BLAST of CmoCh01G008950 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G71450.1	1.4e-47	60.61	Integrase-type DNA-binding superfamily protein	[more]
AT1G33760.1	7.6e-41	57.23	Integrase-type DNA-binding superfamily protein	[more]
AT1G01250.1	2.0e-25	62.65	Integrase-type DNA-binding superfamily protein	[more]
AT5G11590.1	2.6e-25	58.76	Integrase-type DNA-binding superfamily protein	[more]
AT5G25810.1	2.9e-24	62.65	Integrase-type DNA-binding superfamily protein	[more]

BLAST of CmoCh01G008950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119342\|ref\|XP_008459604.1\|	2.5e-70	78.02	PREDICTED: ethylene-responsive transcription factor ERF021 [Cucumis melo]	[more]
gi\|449447759\|ref\|XP_004141635.1\|	2.8e-69	76.34	PREDICTED: ethylene-responsive transcription factor ERF021 [Cucumis sativus]	[more]
gi\|1009137382\|ref\|XP_015886023.1\|	5.7e-62	70.06	PREDICTED: ethylene-responsive transcription factor ERF021-like [Ziziphus jujuba...	[more]
gi\|645224416\|ref\|XP_008219098.1\|	1.6e-61	73.05	PREDICTED: ethylene-responsive transcription factor ERF021-like [Prunus mume]	[more]
gi\|596196504\|ref\|XP_007223585.1\|	1.6e-61	73.05	hypothetical protein PRUPE_ppa012354mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G008950.1	CmoCh01G008950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 33..49 score: 3.3E-10coord: 11..22 score: 3.3
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 10..68 score: 3.1
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 9..59 score: 4.8
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 10..73 score: 5.8
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 10..67 score: 2
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 9..68 score: 2.88
None	No IPR available	PANTHER	PTHR31985	FAMILY NOT NAMED	coord: 4..170 score: 2.0E
None	No IPR available	PANTHER	PTHR31985:SF17	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF021	coord: 4..170 score: 2.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G008950	Cucsa.237150	Cucumber (Gy14) v1	cgycmoB0661
CmoCh01G008950	CmaCh09G012550	Cucurbita maxima (Rimu)	cmacmoB043
CmoCh01G008950	CmaCh01G008510	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G008950	Cla012465	Watermelon (97103) v1	cmowmB411
CmoCh01G008950	Csa5G649870	Cucumber (Chinese Long) v2	cmocuB472
CmoCh01G008950	MELO3C022181	Melon (DHL92) v3.5.1	cmomeB375
CmoCh01G008950	ClCG08G000980	Watermelon (Charleston Gray)	cmowcgB429
CmoCh01G008950	CSPI05G30970	Wild cucumber (PI 183967)	cmocpiB476
CmoCh01G008950	Lsi08G000710	Bottle gourd (USVL1VR-Ls)	cmolsiB440
CmoCh01G008950	Cp4.1LG06g09930	Cucurbita pepo (Zucchini)	cmocpeB468
CmoCh01G008950	MELO3C022181.2	Melon (DHL92) v3.6.1	cmomedB431
CmoCh01G008950	CsaV3_5G040010	Cucumber (Chinese Long) v3	cmocucB0565
CmoCh01G008950	Cla97C08G145370	Watermelon (97103) v2	cmowmbB481
CmoCh01G008950	CsGy5G030280	Cucumber (Gy14) v2	cgybcmoB611
CmoCh01G008950	Carg26296	Silver-seed gourd	carcmoB0230

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh01G008950	CmoCh09G012770	Cucurbita moschata (Rifu)	cmocmoB021

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G008950	Wax gourd	cmowgoB0553
CmoCh01G008950	Watermelon (Charleston Gray)	cmowcgB430
CmoCh01G008950	Watermelon (97103) v1	cmowmB412
CmoCh01G008950	Cucurbita pepo (Zucchini)	cmocpeB448
CmoCh01G008950	Watermelon (97103) v2	cmowmbB482