CmoCh01G008940 (gene) Cucurbita moschata (Rifu)

NameCmoCh01G008940
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPentatricopeptide repeat-containing family protein
LocationCmo_Chr01 : 4952040 .. 4954124 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATCTCGTCCTCGTTCACTCTGTCCCTTCATCTTCACCCTTTCCCTCCAAATCCTCTCGCCGTCGCCGTCGCCGCCGCTAATTCCAATTCTGGCCACCGACTGTCCCGAATCAAAACCTCGACACAGACACTGACCGATACACCGCCCTTAAGAAACAAAGTAGTTGCCAAATTTCAGAACAGAAAACGCCCAGTTTTTGCTGAGAGAGATGCTTTTCCTGAATCTTTACCACTTCACACCAAGAACCCACATGCCATTTACAAGGATATTCAAAGATTTGCGCGCCAAAATAAGCTTAAAGAGGCACTTACGATTATGGACTATTTGGATCAACGAGGCATCCCAGTTAATGCGACTACATTTTCTTCTCTTATTACTGCTTGCGTTAGAGCCAAATCTTTGGCTAACGCTAAACAGGTTCACGCTCATATTCGGATAAATGGACTTGAAAACAATGAATTTTTGCGTACGAGGCTTGTTCATATGTATACTGCTTGTGGGTCTTTGGAAGATGCACAGAAGCTATTTGATGAAAGTTCTAGCAGAAGTGTTTATCCTTGGAATGCGTTGCTTAGAGGCACTGTAATGGCAGGGCGGCAGGATTACCGTAGCATACTCTCGACATATGCAGAAATGCGAAGATTGGGGGTTGAATTGAACGTTTACTCTTTTGCTAATATCATTAAGAGCTTTGCAGGTGCATCGGCGCTTACCCAGGGGCTTAAGGCCCATGCCCTTTTGATTAAAAATGGATTGGTTGGCAGTTCAATTCTTGGGACAACTTTGATTGATATGTACTTCAAATGTGGTAAGATCAAGCTTGCCCGCCAGATGTTCGATGAAATTACTGAGAGAGATATTGTGGTTTGGGGATCAATGATTGCTGGTTTTGCTCACAATAGACTTCAAAGGGAAGCTTTGGAATATACAAGAAGGATGATAGACGACGGAATTAGACCGAATTCGGTCATACTGACATCGATTCTTCCTGTTATTGGAGACGTCGGGGCTAGGAGATTAGGCCAGGAAGTTCATGCTTTTGTTATAAAGACAAAGAACTATTCAAGGCTGATATATATTCAATCTGCTTTGATTGATATGTATTGCAAATGTGGAGACATTGGTTTGGGCAGAGCGGTTTTTTATGGTTCCAAGGAGAGGAATGCTATCTGTTGGACTGCTTTGATGTCTGGTTATGCTTTAAATGGCAGGCTAGAGCAAGCTGTAAGATCAGTCATTTGGATGCAACAGGAAGGATTTAGACCAGACGTCGTTACGGTTGCTACAATTCTTCCAGTTTGCGCCAAGTTGAGGGCTCTCAAACCCGGAAAGGAGATTCATGCATACGCTTTGAAGAACTACTTCCTACCAAATGTATCCATTGTTTCATCCTTGATGGTAATGTATTCAAAATGTGGAGTAATGGACTATTCTCTAAAGCTTTTCAACGCCATGGAGCAAAGAAATGTGATCTTATGGACAACAATGATTGATTCCTACATAGAAAATCAGTGTCTGTATGAAGCTATTGATATATTCAGAGTGATGCAGCTATCAAAGCATCGACCAGACACTGTAACCATGTCAAGAATCCTCTATGTATGCAGTGAACTAAAACTGTTGAAGATGGGGAAGGAGATACATGGGCAAGTTTTGAAGAGGAACTTCGAGTCGGTCCATTTTGTTTCGTCCGAAGTCGTGAAGCTATATGGGAAATGTGGAGCTCTAAAAATGGCAAAAATGGTGTTTGAAGCAGTCCCTGTAAAGGGGGCAATGACATGGACTGCCATTATTGAAGCTTATGGAAACAATGGAGAGTTACAGGAAGCAATCCATTTGTTTGATCAAATGAGATCCTCTGGTTTCACTCCAAACCATTTCACTTTCAAAGTGGTTTTATCTGTTTGTAATGAAGGTGGTTTCGTTGATGATGCTCTGCGCATCTTCAAACTGATGACTGTTACGTATAAGATTAAGGCATCTGAAGAACATTACTCGTTCGTCATTGCGATTCTAACTCGGTTTGGTCGAATTGAGGAGGCCAAATGGTATGAACAAATGAGTTCTTCATTATCATGA

mRNA sequence

ATGGAAATCTCGTCCTCGTTCACTCTGTCCCTTCATCTTCACCCTTTCCCTCCAAATCCTCTCGCCGTCGCCGTCGCCGCCGCTAATTCCAATTCTGGCCACCGACTGTCCCGAATCAAAACCTCGACACAGACACTGACCGATACACCGCCCTTAAGAAACAAAGTAGTTGCCAAATTTCAGAACAGAAAACGCCCAGTTTTTGCTGAGAGAGATGCTTTTCCTGAATCTTTACCACTTCACACCAAGAACCCACATGCCATTTACAAGGATATTCAAAGATTTGCGCGCCAAAATAAGCTTAAAGAGGCACTTACGATTATGGACTATTTGGATCAACGAGGCATCCCAGTTAATGCGACTACATTTTCTTCTCTTATTACTGCTTGCGTTAGAGCCAAATCTTTGGCTAACGCTAAACAGGTTCACGCTCATATTCGGATAAATGGACTTGAAAACAATGAATTTTTGCGTACGAGGCTTGTTCATATGTATACTGCTTGTGGGTCTTTGGAAGATGCACAGAAGCTATTTGATGAAAGTTCTAGCAGAAGTGTTTATCCTTGGAATGCGTTGCTTAGAGGCACTGTAATGGCAGGGCGGCAGGATTACCGTAGCATACTCTCGACATATGCAGAAATGCGAAGATTGGGGGTTGAATTGAACGTTTACTCTTTTGCTAATATCATTAAGAGCTTTGCAGGTGCATCGGCGCTTACCCAGGGGCTTAAGGCCCATGCCCTTTTGATTAAAAATGGATTGGTTGGCAGTTCAATTCTTGGGACAACTTTGATTGATATGTACTTCAAATGTGGTAAGATCAAGCTTGCCCGCCAGATGTTCGATGAAATTACTGAGAGAGATATTGTGGTTTGGGGATCAATGATTGCTGGTTTTGCTCACAATAGACTTCAAAGGGAAGCTTTGGAATATACAAGAAGGATGATAGACGACGGAATTAGACCGAATTCGGTCATACTGACATCGATTCTTCCTGTTATTGGAGACGTCGGGGCTAGGAGATTAGGCCAGGAAGTTCATGCTTTTGTTATAAAGACAAAGAACTATTCAAGGCTGATATATATTCAATCTGCTTTGATTGATATGTATTGCAAATGTGGAGACATTGGTTTGGGCAGAGCGGTTTTTTATGGTTCCAAGGAGAGGAATGCTATCTGTTGGACTGCTTTGATGTCTGGTTATGCTTTAAATGGCAGGCTAGAGCAAGCTGTAAGATCAGTCATTTGGATGCAACAGGAAGGATTTAGACCAGACGTCGTTACGGTTGCTACAATTCTTCCAGTTTGCGCCAAGTTGAGGGCTCTCAAACCCGGAAAGGAGATTCATGCATACGCTTTGAAGAACTACTTCCTACCAAATGTATCCATTGTTTCATCCTTGATGGTAATGTATTCAAAATGTGGAGTAATGGACTATTCTCTAAAGCTTTTCAACGCCATGGAGCAAAGAAATGTGATCTTATGGACAACAATGATTGATTCCTACATAGAAAATCAGTGTCTGTATGAAGCTATTGATATATTCAGAGTGATGCAGCTATCAAAGCATCGACCAGACACTGTAACCATGTCAAGAATCCTCTATGTATGCAGTGAACTAAAACTGTTGAAGATGGGGAAGGAGATACATGGGCAAGTTTTGAAGAGGAACTTCGAGTCGGTCCATTTTGTTTCGTCCGAAGTCGTGAAGCTATATGGGAAATGTGGAGCTCTAAAAATGGCAAAAATGGTGTTTGAAGCAGTCCCTGTAAAGGGGGCAATGACATGGACTGCCATTATTGAAGCTTATGGAAACAATGGAGAGTTACAGGAAGCAATCCATTTGTTTGATCAAATGAGATCCTCTGGTTTCACTCCAAACCATTTCACTTTCAAAGTGGTTTTATCTGTTTGTAATGAAGGTGGTTTCGTTGATGATGCTCTGCGCATCTTCAAACTGATGACTGTTACGTATAAGATTAAGGCATCTGAAGAACATTACTCGTTCGTCATTGCGATTCTAACTCGGTTTGGTCGAATTGAGGAGGCCAAATGGTATGAACAAATGAGTTCTTCATTATCATGA

Coding sequence (CDS)

ATGGAAATCTCGTCCTCGTTCACTCTGTCCCTTCATCTTCACCCTTTCCCTCCAAATCCTCTCGCCGTCGCCGTCGCCGCCGCTAATTCCAATTCTGGCCACCGACTGTCCCGAATCAAAACCTCGACACAGACACTGACCGATACACCGCCCTTAAGAAACAAAGTAGTTGCCAAATTTCAGAACAGAAAACGCCCAGTTTTTGCTGAGAGAGATGCTTTTCCTGAATCTTTACCACTTCACACCAAGAACCCACATGCCATTTACAAGGATATTCAAAGATTTGCGCGCCAAAATAAGCTTAAAGAGGCACTTACGATTATGGACTATTTGGATCAACGAGGCATCCCAGTTAATGCGACTACATTTTCTTCTCTTATTACTGCTTGCGTTAGAGCCAAATCTTTGGCTAACGCTAAACAGGTTCACGCTCATATTCGGATAAATGGACTTGAAAACAATGAATTTTTGCGTACGAGGCTTGTTCATATGTATACTGCTTGTGGGTCTTTGGAAGATGCACAGAAGCTATTTGATGAAAGTTCTAGCAGAAGTGTTTATCCTTGGAATGCGTTGCTTAGAGGCACTGTAATGGCAGGGCGGCAGGATTACCGTAGCATACTCTCGACATATGCAGAAATGCGAAGATTGGGGGTTGAATTGAACGTTTACTCTTTTGCTAATATCATTAAGAGCTTTGCAGGTGCATCGGCGCTTACCCAGGGGCTTAAGGCCCATGCCCTTTTGATTAAAAATGGATTGGTTGGCAGTTCAATTCTTGGGACAACTTTGATTGATATGTACTTCAAATGTGGTAAGATCAAGCTTGCCCGCCAGATGTTCGATGAAATTACTGAGAGAGATATTGTGGTTTGGGGATCAATGATTGCTGGTTTTGCTCACAATAGACTTCAAAGGGAAGCTTTGGAATATACAAGAAGGATGATAGACGACGGAATTAGACCGAATTCGGTCATACTGACATCGATTCTTCCTGTTATTGGAGACGTCGGGGCTAGGAGATTAGGCCAGGAAGTTCATGCTTTTGTTATAAAGACAAAGAACTATTCAAGGCTGATATATATTCAATCTGCTTTGATTGATATGTATTGCAAATGTGGAGACATTGGTTTGGGCAGAGCGGTTTTTTATGGTTCCAAGGAGAGGAATGCTATCTGTTGGACTGCTTTGATGTCTGGTTATGCTTTAAATGGCAGGCTAGAGCAAGCTGTAAGATCAGTCATTTGGATGCAACAGGAAGGATTTAGACCAGACGTCGTTACGGTTGCTACAATTCTTCCAGTTTGCGCCAAGTTGAGGGCTCTCAAACCCGGAAAGGAGATTCATGCATACGCTTTGAAGAACTACTTCCTACCAAATGTATCCATTGTTTCATCCTTGATGGTAATGTATTCAAAATGTGGAGTAATGGACTATTCTCTAAAGCTTTTCAACGCCATGGAGCAAAGAAATGTGATCTTATGGACAACAATGATTGATTCCTACATAGAAAATCAGTGTCTGTATGAAGCTATTGATATATTCAGAGTGATGCAGCTATCAAAGCATCGACCAGACACTGTAACCATGTCAAGAATCCTCTATGTATGCAGTGAACTAAAACTGTTGAAGATGGGGAAGGAGATACATGGGCAAGTTTTGAAGAGGAACTTCGAGTCGGTCCATTTTGTTTCGTCCGAAGTCGTGAAGCTATATGGGAAATGTGGAGCTCTAAAAATGGCAAAAATGGTGTTTGAAGCAGTCCCTGTAAAGGGGGCAATGACATGGACTGCCATTATTGAAGCTTATGGAAACAATGGAGAGTTACAGGAAGCAATCCATTTGTTTGATCAAATGAGATCCTCTGGTTTCACTCCAAACCATTTCACTTTCAAAGTGGTTTTATCTGTTTGTAATGAAGGTGGTTTCGTTGATGATGCTCTGCGCATCTTCAAACTGATGACTGTTACGTATAAGATTAAGGCATCTGAAGAACATTACTCGTTCGTCATTGCGATTCTAACTCGGTTTGGTCGAATTGAGGAGGCCAAATGGTATGAACAAATGAGTTCTTCATTATCATGA
BLAST of CmoCh01G008940 vs. Swiss-Prot
Match: PP115_ARATH (Pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Arabidopsis thaliana GN=PCMP-A3 PE=2 SV=1)

HSP 1 Score: 873.6 bits (2256), Expect = 1.4e-252
Identity = 430/676 (63.61%), Postives = 535/676 (79.14%), Query Frame = 1

Query: 20  PLAVAVAAANSNSGHRLSRIKTSTQTLTDTPPLRNKVVAKFQNRKRPVFAERDAFPESLP 79
           P +++V  + ++  HR    K      +   P R +  +    +K   F ERDAFP SLP
Sbjct: 13  PASLSVTTSLNHRPHRSD--KDGAPAKSPIRPSRTRRPSTSPAKKPKPFRERDAFPSSLP 72

Query: 80  LHTKNPHAIYKDIQRFARQNKLKEALTIMDYLDQRGIPVNATTFSSLITACVRAKSLANA 139
           LH+KNP+ I++DIQ FARQN L+ ALTI+DYL+QRGIPVNATTFS+L+ ACVR KSL + 
Sbjct: 73  LHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHG 132

Query: 140 KQVHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDESSSRSVYPWNALLRGTVMA 199
           KQVH HIRINGLE+NEFLRT+LVHMYTACGS++DAQK+FDES+S +VY WNALLRGTV++
Sbjct: 133 KQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVIS 192

Query: 200 GRQDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHALLIKNGLVGSSI 259
           G++ Y+ +LST+ EMR LGV+LNVYS +N+ KSFAGASAL QGLK HAL IKNGL  S  
Sbjct: 193 GKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVF 252

Query: 260 LGTTLIDMYFKCGKIKLARQMFDEITERDIVVWGSMIAGFAHNRLQREALEYTRRMI-DD 319
           L T+L+DMYFKCGK+ LAR++FDEI ERDIVVWG+MIAG AHN+ Q EAL   R MI ++
Sbjct: 253 LKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEE 312

Query: 320 GIRPNSVILTSILPVIGDVGARRLGQEVHAFVIKTKNYSRLIYIQSALIDMYCKCGDIGL 379
            I PNSVILT+ILPV+GDV A +LG+EVHA V+K+KNY    ++ S LID+YCKCGD+  
Sbjct: 313 KIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMAS 372

Query: 380 GRAVFYGSKERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVATILPVCAK 439
           GR VFYGSK+RNAI WTALMSGYA NGR +QA+RS++WMQQEGFRPDVVT+AT+LPVCA+
Sbjct: 373 GRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAE 432

Query: 440 LRALKPGKEIHAYALKNYFLPNVSIVSSLMVMYSKCGVMDYSLKLFNAMEQRNVILWTTM 499
           LRA+K GKEIH YALKN FLPNVS+V+SLMVMYSKCGV +Y ++LF+ +EQRNV  WT M
Sbjct: 433 LRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAM 492

Query: 500 IDSYIENQCLYEAIDIFRVMQLSKHRPDTVTMSRILYVCSELKLLKMGKEIHGQVLKRNF 559
           ID Y+EN  L   I++FR+M LSKHRPD+VTM R+L VCS+LK LK+GKE+HG +LK+ F
Sbjct: 493 IDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEF 552

Query: 560 ESVHFVSSEVVKLYGKCGALKMAKMVFEAVPVKGAMTWTAIIEAYGNNGELQEAIHLFDQ 619
           ES+ FVS+ ++K+YGKCG L+ A   F+AV VKG++TWTAIIEAYG N   ++AI+ F+Q
Sbjct: 553 ESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQ 612

Query: 620 MRSSGFTPNHFTFKVVLSVCNEGGFVDDALRIFKLMTVTYKIKASEEHYSFVIAILTRFG 679
           M S GFTPN FTF  VLS+C++ GFVD+A R F LM   Y ++ SEEHYS VI +L R G
Sbjct: 613 MVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCG 672

Query: 680 RIEEAKWYEQMSSSLS 695
           R+EEA+    MSSS S
Sbjct: 673 RVEEAQRLAVMSSSSS 686

BLAST of CmoCh01G008940 vs. Swiss-Prot
Match: PP320_ARATH (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana GN=DOT4 PE=2 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.2e-96
Identity = 192/593 (32.38%), Postives = 330/593 (55.65%), Query Frame = 1

Query: 92  IQRFARQNKLKEALTIMDYLDQRGIPVNATTFSSLITACVRAKSLANAKQVHAHIRINGL 151
           ++RF     L+ A+ ++    +  I  +  T  S++  C  +KSL + K+V   IR NG 
Sbjct: 68  LRRFCESGNLENAVKLLCVSGKWDI--DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGF 127

Query: 152 ENNEFLRTRLVHMYTACGSLEDAQKLFDESSSRSVYPWNALLRGTVMAGRQDYRSILSTY 211
             +  L ++L  MYT CG L++A ++FDE        WN L+     +G  D+   +  +
Sbjct: 128 VIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSG--DFSGSIGLF 187

Query: 212 AEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHALLIKNGLVGSSILGTTLIDMYFKC 271
            +M   GVE++ Y+F+ + KSF+   ++  G + H  ++K+G    + +G +L+  Y K 
Sbjct: 188 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN 247

Query: 272 GKIKLARQMFDEITERDIVVWGSMIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTSIL 331
            ++  AR++FDE+TERD++ W S+I G+  N L  + L    +M+  GI  +   + S+ 
Sbjct: 248 QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF 307

Query: 332 PVIGDVGARRLGQEVHAFVIKTKNYSRLIYIQSALIDMYCKCGDIGLGRAVFYGSKERNA 391
               D     LG+ VH+  +K   +SR     + L+DMY KCGD+   +AVF    +R+ 
Sbjct: 308 AGCADSRLISLGRAVHSIGVKAC-FSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV 367

Query: 392 ICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVATILPVCAKLRALKPGKEIHAY 451
           + +T++++GYA  G   +AV+    M++EG  PDV TV  +L  CA+ R L  GK +H +
Sbjct: 368 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEW 427

Query: 452 ALKNYFLPNVSIVSSLMVMYSKCGVMDYSLKLFNAMEQRNVILWTTMIDSYIENQCLYEA 511
             +N    ++ + ++LM MY+KCG M  +  +F+ M  +++I W T+I  Y +N    EA
Sbjct: 428 IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEA 487

Query: 512 IDIFRVMQLSKH-RPDTVTMSRILYVCSELKLLKMGKEIHGQVLKRNFESVHFVSSEVVK 571
           + +F ++   K   PD  T++ +L  C+ L     G+EIHG +++  + S   V++ +V 
Sbjct: 488 LSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVD 547

Query: 572 LYGKCGALKMAKMVFEAVPVKGAMTWTAIIEAYGNNGELQEAIHLFDQMRSSGFTPNHFT 631
           +Y KCGAL +A M+F+ +  K  ++WT +I  YG +G  +EAI LF+QMR +G   +  +
Sbjct: 548 MYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEIS 607

Query: 632 FKVVLSVCNEGGFVDDALRIFKLMTVTYKIKASEEHYSFVIAILTRFGRIEEA 684
           F  +L  C+  G VD+  R F +M    KI+ + EHY+ ++ +L R G + +A
Sbjct: 608 FVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKA 655

BLAST of CmoCh01G008940 vs. Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 6.2e-91
Identity = 175/552 (31.70%), Postives = 307/552 (55.62%), Query Frame = 1

Query: 132 RAKSLANAKQVHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDESSSRSVYPWNA 191
           R  SL   +Q+   +  NGL    F +T+LV ++   GS+++A ++F+   S+    ++ 
Sbjct: 46  RCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHT 105

Query: 192 LLRGTVMAGRQDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHALLIK 251
           +L+G   A   D    L  +  MR   VE  VY+F  ++K     + L  G + H LL+K
Sbjct: 106 MLKG--FAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 165

Query: 252 NGLVGSSILGTTLIDMYFKCGKIKLARQMFDEITERDIVVWGSMIAGFAHNRLQREALEY 311
           +G        T L +MY KC ++  AR++FD + ERD+V W +++AG++ N + R ALE 
Sbjct: 166 SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEM 225

Query: 312 TRRMIDDGIRPNSVILTSILPVIGDVGARRLGQEVHAFVIKTKNYSRLIYIQSALIDMYC 371
            + M ++ ++P+ + + S+LP +  +    +G+E+H + +++  +  L+ I +AL+DMY 
Sbjct: 226 VKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS-GFDSLVNISTALVDMYA 285

Query: 372 KCGDIGLGRAVFYGSKERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVAT 431
           KCG +   R +F G  ERN + W +++  Y  N   ++A+     M  EG +P  V+V  
Sbjct: 286 KCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG 345

Query: 432 ILPVCAKLRALKPGKEIHAYALKNYFLPNVSIVSSLMVMYSKCGVMDYSLKLFNAMEQRN 491
            L  CA L  L+ G+ IH  +++     NVS+V+SL+ MY KC  +D +  +F  ++ R 
Sbjct: 346 ALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT 405

Query: 492 VILWTTMIDSYIENQCLYEAIDIFRVMQLSKHRPDTVTMSRILYVCSELKLLKMGKEIHG 551
           ++ W  MI  + +N    +A++ F  M+    +PDT T   ++   +EL +    K IHG
Sbjct: 406 LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHG 465

Query: 552 QVLKRNFESVHFVSSEVVKLYGKCGALKMAKMVFEAVPVKGAMTWTAIIEAYGNNGELQE 611
            V++   +   FV++ +V +Y KCGA+ +A+++F+ +  +   TW A+I+ YG +G  + 
Sbjct: 466 VVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKA 525

Query: 612 AIHLFDQMRSSGFTPNHFTFKVVLSVCNEGGFVDDALRIFKLMTVTYKIKASEEHYSFVI 671
           A+ LF++M+     PN  TF  V+S C+  G V+  L+ F +M   Y I+ S +HY  ++
Sbjct: 526 ALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMV 585

Query: 672 AILTRFGRIEEA 684
            +L R GR+ EA
Sbjct: 586 DLLGRAGRLNEA 594

BLAST of CmoCh01G008940 vs. Swiss-Prot
Match: PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 334.0 bits (855), Expect = 4.0e-90
Identity = 192/605 (31.74%), Postives = 322/605 (53.22%), Query Frame = 1

Query: 97  RQNKLKEALTIMDYLDQ--RGIPVNATTFSSLITACVRAKSLANAKQVHAHIRINGLE-N 156
           R N L+EA  ++ Y+D    GI  +   F +L+ A    + +   KQ+HAH+   G   +
Sbjct: 74  RSNLLREA--VLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVD 133

Query: 157 NEFLRTRLVHMYTACGSLEDAQKLFDESSSRSVYPWNALLRGTVMAGRQDYRSILSTYAE 216
           +  +   LV++Y  CG      K+FD  S R+   WN+L+    +   + +   L  +  
Sbjct: 134 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISS--LCSFEKWEMALEAFRC 193

Query: 217 MRRLGVELNVYSFANIIKSFAGA---SALTQGLKAHALLIKNGLVGSSILGTTLIDMYFK 276
           M    VE + ++  +++ + +       L  G + HA  ++ G + S I+ T L+ MY K
Sbjct: 194 MLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT-LVAMYGK 253

Query: 277 CGKIKLARQMFDEITERDIVVWGSMIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTSI 336
            GK+  ++ +      RD+V W ++++    N    EALEY R M+ +G+ P+   ++S+
Sbjct: 254 LGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSV 313

Query: 337 LPVIGDVGARRLGQEVHAFVIKTKNYSRLIYIQSALIDMYCKCGDIGLGRAVFYGSKERN 396
           LP    +   R G+E+HA+ +K  +     ++ SAL+DMYC C  +  GR VF G  +R 
Sbjct: 314 LPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRK 373

Query: 397 AICWTALMSGYALNGRLEQAVRSVIWMQQE-GFRPDVVTVATILPVCAKLRALKPGKEIH 456
              W A+++GY+ N   ++A+   I M++  G   +  T+A ++P C +  A    + IH
Sbjct: 374 IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIH 433

Query: 457 AYALKNYFLPNVSIVSSLMVMYSKCGVMDYSLKLFNAMEQRNVILWTTMIDSYIENQCLY 516
            + +K     +  + ++LM MYS+ G +D ++++F  ME R+++ W TMI  Y+ ++   
Sbjct: 434 GFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHE 493

Query: 517 EAIDIFRVMQ-----LSKH------RPDTVTMSRILYVCSELKLLKMGKEIHGQVLKRNF 576
           +A+ +   MQ     +SK       +P+++T+  IL  C+ L  L  GKEIH   +K N 
Sbjct: 494 DALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNL 553

Query: 577 ESVHFVSSEVVKLYGKCGALKMAKMVFEAVPVKGAMTWTAIIEAYGNNGELQEAIHLFDQ 636
            +   V S +V +Y KCG L+M++ VF+ +P K  +TW  II AYG +G  QEAI L   
Sbjct: 554 ATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRM 613

Query: 637 MRSSGFTPNHFTFKVVLSVCNEGGFVDDALRIFKLMTVTYKIKASEEHYSFVIAILTRFG 684
           M   G  PN  TF  V + C+  G VD+ LRIF +M   Y ++ S +HY+ V+ +L R G
Sbjct: 614 MMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAG 673

BLAST of CmoCh01G008940 vs. Swiss-Prot
Match: PP333_ARATH (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 7.6e-89
Identity = 183/601 (30.45%), Postives = 320/601 (53.24%), Query Frame = 1

Query: 92  IQRFARQNKLKEALTIMDYLDQRGIPVNATTFSSLITACVRAKSLANAKQVHAHIRINGL 151
           I  F R   L +AL     +   G+  + +TF  L+ ACV  K+      +   +   G+
Sbjct: 110 ISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGM 169

Query: 152 ENNEFLRTRLVHMYTACGSLEDAQKLFDESSSRSVYPWNALLRGTVMAGRQDYRSILSTY 211
           + NEF+ + L+  Y   G ++   KLFD    +    WN +L G    G  D  S++  +
Sbjct: 170 DCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALD--SVIKGF 229

Query: 212 AEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHALLIKNGLVGSSILGTTLIDMYFKC 271
           + MR   +  N  +F  ++   A    +  G++ H L++ +G+     +  +L+ MY KC
Sbjct: 230 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC 289

Query: 272 GKIKLARQMFDEITERDIVVWGSMIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTSIL 331
           G+   A ++F  ++  D V W  MI+G+  + L  E+L +   MI  G+ P+++  +S+L
Sbjct: 290 GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 349

Query: 332 PVIGDVGARRLGQEVHAFVIKTKNYSRLIYIQSALIDMYCKCGDIGLGRAVFYGSKERNA 391
           P +         +++H ++++  + S  I++ SALID Y KC  + + + +F      + 
Sbjct: 350 PSVSKFENLEYCKQIHCYIMR-HSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 409

Query: 392 ICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVATILPVCAKLRALKPGKEIHAY 451
           + +TA++SGY  NG    ++    W+ +    P+ +T+ +ILPV   L ALK G+E+H +
Sbjct: 410 VVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGF 469

Query: 452 ALKNYFLPNVSIVSSLMVMYSKCGVMDYSLKLFNAMEQRNVILWTTMIDSYIENQCLYEA 511
            +K  F    +I  +++ MY+KCG M+ + ++F  + +R+++ W +MI    ++     A
Sbjct: 470 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 529

Query: 512 IDIFRVMQLSKHRPDTVTMSRILYVCSELKLLKMGKEIHGQVLKRNFESVHFVSSEVVKL 571
           IDIFR M +S    D V++S  L  C+ L     GK IHG ++K +  S  +  S ++ +
Sbjct: 530 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDM 589

Query: 572 YGKCGALKMAKMVFEAVPVKGAMTWTAIIEAYGNNGELQEAIHLFDQM-RSSGFTPNHFT 631
           Y KCG LK A  VF+ +  K  ++W +II A GN+G+L++++ LF +M   SG  P+  T
Sbjct: 590 YAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQIT 649

Query: 632 FKVVLSVCNEGGFVDDALRIFKLMTVTYKIKASEEHYSFVIAILTRFGRIEEAKWYEQMS 691
           F  ++S C   G VD+ +R F+ MT  Y I+  +EHY+ V+ +  R GR+ EA  YE + 
Sbjct: 650 FLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEA--YETVK 705

BLAST of CmoCh01G008940 vs. TrEMBL
Match: A0A0A0KXW0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G649310 PE=4 SV=1)

HSP 1 Score: 1194.1 bits (3088), Expect = 0.0e+00
Identity = 593/694 (85.45%), Postives = 643/694 (92.65%), Query Frame = 1

Query: 1   MEISSSFTLSLHLHPFPPNPLAVAVAAANSNSGHRLSRIKTSTQTLTDTPPLRNKVVAKF 60
           MEISSSF +SLHL PF PN LA A A  NS  GHRLSRIK++T    DTPP + K+V+KF
Sbjct: 1   MEISSSFIISLHLQPFTPNSLAPATAICNS--GHRLSRIKSTT----DTPPSKIKIVSKF 60

Query: 61  QNRKRPVFAERDAFPESLPLHTKNPHAIYKDIQRFARQNKLKEALTIMDYLDQRGIPVNA 120
           +NRKRP FAE+DAFP SLPLHTKNPHAIY+D+QRFARQNKLKEALTIMDY+DQ+GIPVNA
Sbjct: 61  RNRKRPTFAEKDAFPSSLPLHTKNPHAIYEDVQRFARQNKLKEALTIMDYVDQQGIPVNA 120

Query: 121 TTFSSLITACVRAKSLANAKQVHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDE 180
           TTFSSLITACVR KS+  AKQ+HAHIRINGLENNEF+RTRLVHMYTACGSLE+AQKLFDE
Sbjct: 121 TTFSSLITACVRTKSMTYAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEEAQKLFDE 180

Query: 181 SSSRSVYPWNALLRGTVMAGRQDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT 240
           SSS+SVYPWNALLRGTVMAGR+DYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASA T
Sbjct: 181 SSSKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFT 240

Query: 241 QGLKAHALLIKNGLVGSSILGTTLIDMYFKCGKIKLARQMFDEITERDIVVWGSMIAGFA 300
           QGLKAH LLIKNGL+GSS+LGTTL+DMYFKCGKIKLARQMF EITERD+VVWGS+IAGFA
Sbjct: 241 QGLKAHGLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWGSIIAGFA 300

Query: 301 HNRLQREALEYTRRMIDDGIRPNSVILTSILPVIGDVGARRLGQEVHAFVIKTKNYSRLI 360
           HNRLQREALEYTRRMIDDGIRPNSVILT+ILPVIG++ ARRLGQEVHA+VIKTK+YS+ I
Sbjct: 301 HNRLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQI 360

Query: 361 YIQSALIDMYCKCGDIGLGRAVFYGSKERNAICWTALMSGYALNGRLEQAVRSVIWMQQE 420
           +IQSALIDMYCKCGDIG GRAVFY S ERNAICWTALMSGYALNGRLEQAVRSVIWMQQE
Sbjct: 361 FIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQE 420

Query: 421 GFRPDVVTVATILPVCAKLRALKPGKEIHAYALKNYFLPNVSIVSSLMVMYSKCGVMDYS 480
           GFRPD+VTVATILPVCA+LRAL+PGKEIHAYA+KN FLPNVSIVSSLMVMYSKCGVMDY+
Sbjct: 421 GFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPNVSIVSSLMVMYSKCGVMDYT 480

Query: 481 LKLFNAMEQRNVILWTTMIDSYIENQCLYEAIDIFRVMQLSKHRPDTVTMSRILYVCSEL 540
           LKLFN MEQRNVILWT MIDSYIENQC +EAIDIFR MQLSKHRPDTVTMSRILY+CSE 
Sbjct: 481 LKLFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQ 540

Query: 541 KLLKMGKEIHGQVLKRNFESVHFVSSEVVKLYGKCGALKMAKMVFEAVPVKGAMTWTAII 600
           K+LKMGKEIHGQVLKR FE VHFVS+E+VKLYGKCGA+KMAKMVFEA+PVKG MTWTAII
Sbjct: 541 KMLKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAII 600

Query: 601 EAYGNNGELQEAIHLFDQMRSSGFTPNHFTFKVVLSVCNEGGFVDDALRIFKLMTVTYKI 660
           EAYG +GE QEAI LFD+MRS G +PNHFTFKVVLS+C E GFVD+ALRIFKLM+V YKI
Sbjct: 601 EAYGESGEFQEAIDLFDRMRSRGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKI 660

Query: 661 KASEEHYSFVIAILTRFGRIEEAKWYEQMSSSLS 695
           K SEEHYS VIAILTRFGR+EEA+ Y QM SSLS
Sbjct: 661 KPSEEHYSLVIAILTRFGRLEEARRYVQMLSSLS 688

BLAST of CmoCh01G008940 vs. TrEMBL
Match: W9T1A9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001633 PE=4 SV=1)

HSP 1 Score: 957.6 bits (2474), Expect = 8.3e-276
Identity = 458/634 (72.24%), Postives = 550/634 (86.75%), Query Frame = 1

Query: 61  QNRKRPVFAERDAFPESLPLHTKNPHAIYKDIQRFARQNKLKEALTIMDYLDQRGIPVNA 120
           + RKRPVF ++DAFPESLPLH+KNP A+Y DIQRFARQNKL +ALTI+DY+DQ+GIPVN 
Sbjct: 14  RRRKRPVFTKKDAFPESLPLHSKNPRAVYSDIQRFARQNKLSQALTILDYMDQQGIPVNP 73

Query: 121 TTFSSLITACVRAKSLANAKQVHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDE 180
           TTF++LI ACVR KSL + KQVHA IRINGL+ NEFLRT+LVHMYT+CGS++DA  LFDE
Sbjct: 74  TTFAALIAACVRTKSLDHGKQVHAFIRINGLDKNEFLRTKLVHMYTSCGSVDDANNLFDE 133

Query: 181 SSSRSVYPWNALLRGTVMAGRQDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT 240
           S SRSVYPWNALLRG V++G + YR  LSTY +MR LG+E+NVYSF+++IKS AGASAL 
Sbjct: 134 SPSRSVYPWNALLRGNVISGGRRYRDALSTYYQMRALGIEMNVYSFSSVIKSLAGASALL 193

Query: 241 QGLKAHALLIKNGLVGSSILGTTLIDMYFKCGKIKLARQMFDEITERDIVVWGSMIAGFA 300
           QGLK HALLIKNGLVGS++L T+LIDMYFKCGKIKLARQ+F+EI ERDIV WG+MI+GFA
Sbjct: 194 QGLKTHALLIKNGLVGSAMLRTSLIDMYFKCGKIKLARQVFEEIVERDIVAWGAMISGFA 253

Query: 301 HNRLQREALEYTRRMIDDGIRPNSVILTSILPVIGDVGARRLGQEVHAFVIKTKNYSRLI 360
           HNRLQ +AL+YTRRM+D+GI+ NSVILT ILPVIG++ AR+LG+EVHA+ +KTK Y++  
Sbjct: 254 HNRLQWQALDYTRRMVDEGIKLNSVILTIILPVIGELLARKLGREVHAYAVKTKRYAKQT 313

Query: 361 YIQSALIDMYCKCGDIGLGRAVFYGSKERNAICWTALMSGYALNGRLEQAVRSVIWMQQE 420
           +IQS LIDMYCKCGD+  GR VFY  KERNAICWTAL+SGY  NGRLEQA+RS+IWMQQE
Sbjct: 314 FIQSGLIDMYCKCGDMENGRRVFYRLKERNAICWTALISGYVANGRLEQALRSIIWMQQE 373

Query: 421 GFRPDVVTVATILPVCAKLRALKPGKEIHAYALKNYFLPNVSIVSSLMVMYSKCGVMDYS 480
           G RPDVVTVAT++P+CA+LRALKPGKEIHAYA+KN FLPNVSIVSSLM+MYSKCGV+DYS
Sbjct: 374 GIRPDVVTVATVVPICAELRALKPGKEIHAYAVKNCFLPNVSIVSSLMMMYSKCGVLDYS 433

Query: 481 LKLFNAMEQRNVILWTTMIDSYIENQCLYEAIDIFRVMQLSKHRPDTVTMSRILYVCSEL 540
           ++LF  MEQRNVILWT MIDSY+EN+ L EA+ + R M LSKHRPD+V + R+L +C+EL
Sbjct: 434 VRLFEGMEQRNVILWTAMIDSYVENRHLDEALSVIRSMVLSKHRPDSVAIGRMLCICNEL 493

Query: 541 KLLKMGKEIHGQVLKRNFESVHFVSSEVVKLYGKCGALKMAKMVFEAVPVKGAMTWTAII 600
           K LK GKEIHGQVLKRNFESVHFVS+E+VK+YG+CG +  AK+VF+ + VKG+MTWTAII
Sbjct: 494 KSLKFGKEIHGQVLKRNFESVHFVSAEIVKMYGRCGVIDDAKLVFDTIRVKGSMTWTAII 553

Query: 601 EAYGNNGELQEAIHLFDQMRSSGFTPNHFTFKVVLSVCNEGGFVDDALRIFKLMTVTYKI 660
           EAY +NG  ++AI LF +MR  GFTPN+FTF+V LS+CNE GFVDDA RIF LMT +Y +
Sbjct: 554 EAYRDNGLYEDAIDLFYEMRDKGFTPNNFTFQVALSICNEAGFVDDACRIFNLMTRSYNV 613

Query: 661 KASEEHYSFVIAILTRFGRIEEAKWYEQMSSSLS 695
           KASEE YS +I +LTRFGR+E A+ Y Q+SSSLS
Sbjct: 614 KASEEQYSLIIGLLTRFGRVEAAQRYMQLSSSLS 647

BLAST of CmoCh01G008940 vs. TrEMBL
Match: A0A061EEF5_THECC (Pentatricopeptide repeat (PPR-like) superfamily protein OS=Theobroma cacao GN=TCM_018189 PE=4 SV=1)

HSP 1 Score: 931.4 bits (2406), Expect = 6.4e-268
Identity = 458/691 (66.28%), Postives = 560/691 (81.04%), Query Frame = 1

Query: 1   MEISSSFTLSLHLHPFPPNPLAVAVAAANSNSGHRLSRIKTSTQTLTDTPPLRNKVVAKF 60
           ME + S +LS  LH FPPNP             ++ SRIK S ++     P RN  +   
Sbjct: 1   MECNQSSSLSFCLHSFPPNPFFCR--------NNQFSRIKASARS--PPKPQRNPTIFAH 60

Query: 61  QNRKRPVFAERDAFPESLPLHTKNPHAIYKDIQRFARQNKLKEALTIMDYLDQRGIPVNA 120
           + R  P F E++AFP SLPLHTKNPHAIYKDIQRFARQNKLKEAL I+DY+DQ+GIPVN 
Sbjct: 61  R-RSPPPFFEKNAFPSSLPLHTKNPHAIYKDIQRFARQNKLKEALAILDYVDQQGIPVNP 120

Query: 121 TTFSSLITACVRAKSLANAKQVHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDE 180
           TTFSSL+ ACVR+KSLA+ +Q+H+HIR NGLENNEFLR +L HMYT+CGS++DA ++FDE
Sbjct: 121 TTFSSLLAACVRSKSLADGRQIHSHIRTNGLENNEFLRAKLAHMYTSCGSIDDALRVFDE 180

Query: 181 SSSRSVYPWNALLRGTVMAGRQDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT 240
            +S++V+ WNALLRGTV++G++ Y  +LSTY+EMR L V+LNVY+F+ ++KSFAGASA  
Sbjct: 181 CTSKNVHSWNALLRGTVISGKKRYLDVLSTYSEMRLLAVKLNVYTFSAVLKSFAGASAFR 240

Query: 241 QGLKAHALLIKNGLVGSSILGTTLIDMYFKCGKIKLARQMFDEITERDIVVWGSMIAGFA 300
           QGLK HALLIKNG + SS+L T LID YFKCGKIKLA ++ +EI ERDIV+WG+MIAGFA
Sbjct: 241 QGLKTHALLIKNGFIDSSMLRTGLIDFYFKCGKIKLACRVLEEIPERDIVLWGAMIAGFA 300

Query: 301 HNRLQREALEYTRRMIDDGIRPNSVILTSILPVIGDVGARRLGQEVHAFVIKTKNYSRLI 360
           HNR+Q+EAL Y R MI  GI PNSVILT+ILPVIG+V AR+LG+E+HA+V+KTK+YS+ +
Sbjct: 301 HNRMQKEALSYVRWMISAGIYPNSVILTTILPVIGEVWARKLGREIHAYVVKTKSYSKQL 360

Query: 361 YIQSALIDMYCKCGDIGLGRAVFYGSKERNAICWTALMSGYALNGRLEQAVRSVIWMQQE 420
            IQS L+DMYCKCGD+  GR VFY S+ERNAI WTALMSGY  NGRL QA+RSV+WMQQE
Sbjct: 361 VIQSGLVDMYCKCGDMDSGRRVFYCSRERNAISWTALMSGYVSNGRLNQALRSVVWMQQE 420

Query: 421 GFRPDVVTVATILPVCAKLRALKPGKEIHAYALKNYFLPNVSIVSSLMVMYSKCGVMDYS 480
           GF+PDVVTVATILPVCA+LRAL  GKEIHAYA+KN F PNVSIV+SLM+MYSKCGV+DYS
Sbjct: 421 GFKPDVVTVATILPVCAELRALSHGKEIHAYAVKNCFFPNVSIVTSLMIMYSKCGVLDYS 480

Query: 481 LKLFNAMEQRNVILWTTMIDSYIENQCLYEAIDIFRVMQLSKHRPDTVTMSRILYVCSEL 540
           LKLFN ME RNVI WT MI+SY+++  L+EA+ +FR MQ SKHRPD+V M+R+L VCSEL
Sbjct: 481 LKLFNGMEARNVISWTAMIESYVKSGHLHEALSVFRSMQFSKHRPDSVAMARMLNVCSEL 540

Query: 541 KLLKMGKEIHGQVLKRNFESVHFVSSEVVKLYGKCGALKMAKMVFEAVPVKGAMTWTAII 600
           + +K+GKEIHGQVLK++FES+ FVS+ +VK+YG CG +  AK+VFEAVPVKG MTWTAII
Sbjct: 541 RAVKLGKEIHGQVLKKDFESIPFVSAGIVKMYGSCGLISTAKLVFEAVPVKGTMTWTAII 600

Query: 601 EAYGNNGELQEAIHLFDQMRSSGFTPNHFTFKVVLSVCNEGGFVDDALRIFKLMTVTYKI 660
           EAYG N   ++AI LF QM S  F PNHFTFKVVLSVC + GFVD A ++F LMT  Y++
Sbjct: 601 EAYGYNDLCEDAISLFHQMASDDFIPNHFTFKVVLSVCRQAGFVDRACQLFSLMTRKYEL 660

Query: 661 KASEEHYSFVIAILTRFGRIEEAKWYEQMSS 692
           KASEEHYS +I +L  FGR EEA+ + QMSS
Sbjct: 661 KASEEHYSIIIELLNTFGRFEEAERFVQMSS 680

BLAST of CmoCh01G008940 vs. TrEMBL
Match: A0A067LLI4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17232 PE=4 SV=1)

HSP 1 Score: 926.4 bits (2393), Expect = 2.0e-266
Identity = 457/694 (65.85%), Postives = 559/694 (80.55%), Query Frame = 1

Query: 1   MEISSSFTLSLHLHPFPPNPLAVAVAAANSNSGHRLSRIKTSTQTLTDTPPLRNKVVAKF 60
           ME++ S +L ++LH F PNP        N+   +     K      T  P    K + K+
Sbjct: 1   MEVTLSRSLCINLHSFSPNPF-------NNGDHNNKHFFKIMACMPTPYPKRYRKRIPKY 60

Query: 61  QNRKRPVFAERDAFPESLPLHTKNPHAIYKDIQRFARQNKLKEALTIMDYLDQRGIPVNA 120
           Q +K   F E+DAFP SLPLH+KNP AI +DIQ+FAR+NKLKEALTIMDYLDQ+GIPVN 
Sbjct: 61  QKKKLKRFKEKDAFPASLPLHSKNPGAICEDIQKFARENKLKEALTIMDYLDQQGIPVNV 120

Query: 121 TTFSSLITACVRAKSLANAKQVHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDE 180
           TTFSSLI AC+R+KSL  AKQ+H  IRING ENNEFLRT+LVHMYTACGSL+DAQ++FDE
Sbjct: 121 TTFSSLIAACIRSKSLDQAKQIHVFIRINGFENNEFLRTKLVHMYTACGSLKDAQQVFDE 180

Query: 181 --SSSRSVYPWNALLRGTVMAGRQDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASA 240
             SSS SVYPWNALLRGTV++G + Y  +LSTY  MR LGVELNVYSF+N+IKSFAGASA
Sbjct: 181 CSSSSSSVYPWNALLRGTVVSGSKRYLDVLSTYTTMRELGVELNVYSFSNVIKSFAGASA 240

Query: 241 LTQGLKAHALLIKNGLVGSSILGTTLIDMYFKCGKIKLARQMFDEITERDIVVWGSMIAG 300
           L QGLKAHA+L+KNGL+ SSIL T+LIDMYFKCGKIKLA ++F+E  +RDIV WG+MI+G
Sbjct: 241 LRQGLKAHAVLVKNGLIDSSILRTSLIDMYFKCGKIKLAHKVFEETLDRDIVFWGAMISG 300

Query: 301 FAHNRLQREALEYTRRMIDDGIRPNSVILTSILPVIGDVGARRLGQEVHAFVIKTKNYSR 360
           FAHNR Q EAL+Y R M+ +G+ PNSVI+T+IL VIGD  AR+LG+E+H +V+KTK+YS+
Sbjct: 301 FAHNRRQWEALDYFRWMVSEGMYPNSVIVTTILNVIGDKWARKLGKEIHGYVVKTKSYSK 360

Query: 361 LIYIQSALIDMYCKCGDIGLGRAVFYGSKERNAICWTALMSGYALNGRLEQAVRSVIWMQ 420
            + IQS LIDMYCKCGD+G  R VFYGS ERNAI WTALMSGYA NGRLEQA+RSV WMQ
Sbjct: 361 QLTIQSGLIDMYCKCGDMGSSRRVFYGSMERNAISWTALMSGYASNGRLEQALRSVSWMQ 420

Query: 421 QEGFRPDVVTVATILPVCAKLRALKPGKEIHAYALKNYFLPNVSIVSSLMVMYSKCGVMD 480
           QEGFRPDVVTVATI+PVC++L+AL  GKEIHAYA+KN F PNVS+ +SLM MYSKCGV+D
Sbjct: 421 QEGFRPDVVTVATIVPVCSELKALNHGKEIHAYAVKNLFFPNVSVTTSLMKMYSKCGVLD 480

Query: 481 YSLKLFNAMEQRNVILWTTMIDSYIENQCLYEAIDIFRVMQLSKHRPDTVTMSRILYVCS 540
           YS+KLFN ME RNVI WT +IDSY EN C+ EA+++FR MQLSKHRPD+V MSR+L +C+
Sbjct: 481 YSVKLFNNMESRNVISWTAIIDSYAENGCINEAMNVFRSMQLSKHRPDSVVMSRMLSICA 540

Query: 541 ELKLLKMGKEIHGQVLKRNFESVHFVSSEVVKLYGKCGALKMAKMVFEAVPVKGAMTWTA 600
           E+K +K+GKEIHG  +K++FES+ FVS+++VK+YG+ G +  AK +F A+PVKG+M WTA
Sbjct: 541 EIKAVKLGKEIHGHAIKKDFESIPFVSADLVKMYGRSGLIDNAKSIFHAIPVKGSMAWTA 600

Query: 601 IIEAYGNNGELQEAIHLFDQMRSSGFTPNHFTFKVVLSVCNEGGFVDDALRIFKLMTVTY 660
           IIEAYG N   QEAI+LF +M S GFTP HFTFKVVLS+C++ GF DDA RIF+LM+  Y
Sbjct: 601 IIEAYGYNNLWQEAIYLFHEMISGGFTPTHFTFKVVLSICDQAGFADDACRIFELMSRRY 660

Query: 661 KIKASEEHYSFVIAILTRFGRIEEAKWYEQMSSS 693
           KIKASEEH S +  +LTR GR +EA+ + +MSSS
Sbjct: 661 KIKASEEHCSIIAGLLTRAGRTQEAERFTKMSSS 687

BLAST of CmoCh01G008940 vs. TrEMBL
Match: B9IQB5_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0019s10410g PE=4 SV=2)

HSP 1 Score: 921.4 bits (2380), Expect = 6.6e-265
Identity = 450/689 (65.31%), Postives = 554/689 (80.41%), Query Frame = 1

Query: 8   TLSLHLHPFPPNPLAVAVAAANSNSGHR-LSRIKTSTQTLTDTPPLRNKVVAKFQNRKRP 67
           +LSLHLH FP NPL       N N  HR  S+IK+STQT          V  +  N+K  
Sbjct: 5   SLSLHLHCFPQNPL-------NINITHRQFSKIKSSTQT--------QPVQTQNPNKKHQ 64

Query: 68  VFAERDAFPESLPLHTKNPHAIYKDIQRFARQNKLKEALTIMDYLDQRGIPVNATTFSSL 127
            F ERDAFP SLPLH KNP AIYKDIQRF+R+N+LK+AL IMDY+DQ+GIPVN TTFS+L
Sbjct: 65  QFDERDAFPASLPLHKKNPQAIYKDIQRFSRKNQLKDALIIMDYMDQQGIPVNPTTFSAL 124

Query: 128 ITACVRAKSLANAKQVHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDE-SSSRS 187
           I AC+R+KSL  AK++H H+RINGL+NNEFLRT+LVHMYT+CGS+EDA+ +FDE +S+ +
Sbjct: 125 IAACIRSKSLTKAKEIHTHLRINGLQNNEFLRTKLVHMYTSCGSIEDAKSVFDECTSTAT 184

Query: 188 VYPWNALLRGTVMAGRQDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGLKA 247
           VYPWNAL+RGTV++G++ Y  +LS Y EMR  GVELN Y+F+N+IKSFAGASAL QG K 
Sbjct: 185 VYPWNALIRGTVISGKKRYGDVLSAYQEMRVNGVELNEYTFSNVIKSFAGASALKQGFKT 244

Query: 248 HALLIKNGLVGSSILGTTLIDMYFKCGKIKLARQMFDEITERDIVVWGSMIAGFAHNRLQ 307
           HA++IKNG++ S++L T LIDMYFKCGK +LA  +F+E+ ERDIV WG+MIAGFAHNR Q
Sbjct: 245 HAIMIKNGMISSAVLRTCLIDMYFKCGKTRLAHNVFEELLERDIVAWGAMIAGFAHNRRQ 304

Query: 308 REALEYTRRMIDDGIRPNSVILTSILPVIGDVGARRLGQEVHAFVIKTKNYSRLIYIQSA 367
            EAL+Y R M+ +G+ PNSVI+TSILPVIG+V ARRLGQEVH +V+K K YSR + IQS 
Sbjct: 305 WEALDYVRWMVSEGMYPNSVIITSILPVIGEVWARRLGQEVHCYVLKMKGYSRELSIQSG 364

Query: 368 LIDMYCKCGDIGLGRAVFYGSKERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPD 427
           LIDMYCKCGD+G GR VFYGS+ERN + WTALMSGY  NGRLEQA+RSV+WMQQEG RPD
Sbjct: 365 LIDMYCKCGDMGSGRRVFYGSRERNVVSWTALMSGYVSNGRLEQALRSVVWMQQEGCRPD 424

Query: 428 VVTVATILPVCAKLRALKPGKEIHAYALKNYFLPNVSIVSSLMVMYSKCGVMDYSLKLFN 487
           VVTVAT++PVCAKL+ LK GKEIHA+++K  FLPNVS+ +SL+ MYSKCGV+DYS+KLF+
Sbjct: 425 VVTVATVIPVCAKLKTLKHGKEIHAFSVKKLFLPNVSLTTSLIKMYSKCGVLDYSVKLFD 484

Query: 488 AMEQRNVILWTTMIDSYIENQCLYEAIDIFRVMQLSKHRPDTVTMSRILYVCSELKLLKM 547
            ME RNVI WT MIDSY+EN C+ EA ++FR MQ SKHRPD+VTM+R+L +CS++K LK 
Sbjct: 485 GMEARNVIAWTAMIDSYVENGCINEAFNVFRFMQWSKHRPDSVTMARMLSICSKIKTLKF 544

Query: 548 GKEIHGQVLKRNFESVHFVSSEVVKLYGKCGALKMAKMVFEAVPVKGAMTWTAIIEAYGN 607
           GKEIHG +LK++FES+ FVSSE+VK+YG CG +  A+ VF AVPVKG+MTWTAIIEAYG 
Sbjct: 545 GKEIHGHILKKDFESIPFVSSELVKMYGSCGLVHSAESVFNAVPVKGSMTWTAIIEAYGY 604

Query: 608 NGELQEAIHLFDQMRSSGFTPNHFTFKVVLSVCNEGGFVDDALRIFKLMTVTYKIKASEE 667
           N   Q+AI LFD+MRS  FTPN FTFKVVLS+C+E GF DDA RIF+LM+  YK+K S E
Sbjct: 605 NSLWQDAIKLFDEMRSRKFTPNDFTFKVVLSICDEAGFADDACRIFELMSKRYKVKISGE 664

Query: 668 HYSFVIAILTRFGRIEEAKWYEQMSSSLS 695
           HY+ +I +L R GR   A+ +  MS+ LS
Sbjct: 665 HYAIIIGLLNRSGRTRAAQRFIDMSNLLS 678

BLAST of CmoCh01G008940 vs. TAIR10
Match: AT1G71460.1 (AT1G71460.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 873.6 bits (2256), Expect = 8.0e-254
Identity = 430/676 (63.61%), Postives = 535/676 (79.14%), Query Frame = 1

Query: 20  PLAVAVAAANSNSGHRLSRIKTSTQTLTDTPPLRNKVVAKFQNRKRPVFAERDAFPESLP 79
           P +++V  + ++  HR    K      +   P R +  +    +K   F ERDAFP SLP
Sbjct: 13  PASLSVTTSLNHRPHRSD--KDGAPAKSPIRPSRTRRPSTSPAKKPKPFRERDAFPSSLP 72

Query: 80  LHTKNPHAIYKDIQRFARQNKLKEALTIMDYLDQRGIPVNATTFSSLITACVRAKSLANA 139
           LH+KNP+ I++DIQ FARQN L+ ALTI+DYL+QRGIPVNATTFS+L+ ACVR KSL + 
Sbjct: 73  LHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHG 132

Query: 140 KQVHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDESSSRSVYPWNALLRGTVMA 199
           KQVH HIRINGLE+NEFLRT+LVHMYTACGS++DAQK+FDES+S +VY WNALLRGTV++
Sbjct: 133 KQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVIS 192

Query: 200 GRQDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHALLIKNGLVGSSI 259
           G++ Y+ +LST+ EMR LGV+LNVYS +N+ KSFAGASAL QGLK HAL IKNGL  S  
Sbjct: 193 GKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVF 252

Query: 260 LGTTLIDMYFKCGKIKLARQMFDEITERDIVVWGSMIAGFAHNRLQREALEYTRRMI-DD 319
           L T+L+DMYFKCGK+ LAR++FDEI ERDIVVWG+MIAG AHN+ Q EAL   R MI ++
Sbjct: 253 LKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEE 312

Query: 320 GIRPNSVILTSILPVIGDVGARRLGQEVHAFVIKTKNYSRLIYIQSALIDMYCKCGDIGL 379
            I PNSVILT+ILPV+GDV A +LG+EVHA V+K+KNY    ++ S LID+YCKCGD+  
Sbjct: 313 KIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMAS 372

Query: 380 GRAVFYGSKERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVATILPVCAK 439
           GR VFYGSK+RNAI WTALMSGYA NGR +QA+RS++WMQQEGFRPDVVT+AT+LPVCA+
Sbjct: 373 GRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAE 432

Query: 440 LRALKPGKEIHAYALKNYFLPNVSIVSSLMVMYSKCGVMDYSLKLFNAMEQRNVILWTTM 499
           LRA+K GKEIH YALKN FLPNVS+V+SLMVMYSKCGV +Y ++LF+ +EQRNV  WT M
Sbjct: 433 LRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAM 492

Query: 500 IDSYIENQCLYEAIDIFRVMQLSKHRPDTVTMSRILYVCSELKLLKMGKEIHGQVLKRNF 559
           ID Y+EN  L   I++FR+M LSKHRPD+VTM R+L VCS+LK LK+GKE+HG +LK+ F
Sbjct: 493 IDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEF 552

Query: 560 ESVHFVSSEVVKLYGKCGALKMAKMVFEAVPVKGAMTWTAIIEAYGNNGELQEAIHLFDQ 619
           ES+ FVS+ ++K+YGKCG L+ A   F+AV VKG++TWTAIIEAYG N   ++AI+ F+Q
Sbjct: 553 ESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQ 612

Query: 620 MRSSGFTPNHFTFKVVLSVCNEGGFVDDALRIFKLMTVTYKIKASEEHYSFVIAILTRFG 679
           M S GFTPN FTF  VLS+C++ GFVD+A R F LM   Y ++ SEEHYS VI +L R G
Sbjct: 613 MVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCG 672

Query: 680 RIEEAKWYEQMSSSLS 695
           R+EEA+    MSSS S
Sbjct: 673 RVEEAQRLAVMSSSSS 686

BLAST of CmoCh01G008940 vs. TAIR10
Match: AT4G18750.1 (AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 354.8 bits (909), Expect = 1.2e-97
Identity = 192/593 (32.38%), Postives = 330/593 (55.65%), Query Frame = 1

Query: 92  IQRFARQNKLKEALTIMDYLDQRGIPVNATTFSSLITACVRAKSLANAKQVHAHIRINGL 151
           ++RF     L+ A+ ++    +  I  +  T  S++  C  +KSL + K+V   IR NG 
Sbjct: 68  LRRFCESGNLENAVKLLCVSGKWDI--DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGF 127

Query: 152 ENNEFLRTRLVHMYTACGSLEDAQKLFDESSSRSVYPWNALLRGTVMAGRQDYRSILSTY 211
             +  L ++L  MYT CG L++A ++FDE        WN L+     +G  D+   +  +
Sbjct: 128 VIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSG--DFSGSIGLF 187

Query: 212 AEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHALLIKNGLVGSSILGTTLIDMYFKC 271
            +M   GVE++ Y+F+ + KSF+   ++  G + H  ++K+G    + +G +L+  Y K 
Sbjct: 188 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN 247

Query: 272 GKIKLARQMFDEITERDIVVWGSMIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTSIL 331
            ++  AR++FDE+TERD++ W S+I G+  N L  + L    +M+  GI  +   + S+ 
Sbjct: 248 QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF 307

Query: 332 PVIGDVGARRLGQEVHAFVIKTKNYSRLIYIQSALIDMYCKCGDIGLGRAVFYGSKERNA 391
               D     LG+ VH+  +K   +SR     + L+DMY KCGD+   +AVF    +R+ 
Sbjct: 308 AGCADSRLISLGRAVHSIGVKAC-FSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV 367

Query: 392 ICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVATILPVCAKLRALKPGKEIHAY 451
           + +T++++GYA  G   +AV+    M++EG  PDV TV  +L  CA+ R L  GK +H +
Sbjct: 368 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEW 427

Query: 452 ALKNYFLPNVSIVSSLMVMYSKCGVMDYSLKLFNAMEQRNVILWTTMIDSYIENQCLYEA 511
             +N    ++ + ++LM MY+KCG M  +  +F+ M  +++I W T+I  Y +N    EA
Sbjct: 428 IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEA 487

Query: 512 IDIFRVMQLSKH-RPDTVTMSRILYVCSELKLLKMGKEIHGQVLKRNFESVHFVSSEVVK 571
           + +F ++   K   PD  T++ +L  C+ L     G+EIHG +++  + S   V++ +V 
Sbjct: 488 LSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVD 547

Query: 572 LYGKCGALKMAKMVFEAVPVKGAMTWTAIIEAYGNNGELQEAIHLFDQMRSSGFTPNHFT 631
           +Y KCGAL +A M+F+ +  K  ++WT +I  YG +G  +EAI LF+QMR +G   +  +
Sbjct: 548 MYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEIS 607

Query: 632 FKVVLSVCNEGGFVDDALRIFKLMTVTYKIKASEEHYSFVIAILTRFGRIEEA 684
           F  +L  C+  G VD+  R F +M    KI+ + EHY+ ++ +L R G + +A
Sbjct: 608 FVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKA 655

BLAST of CmoCh01G008940 vs. TAIR10
Match: AT1G11290.1 (AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 336.7 bits (862), Expect = 3.5e-92
Identity = 175/552 (31.70%), Postives = 307/552 (55.62%), Query Frame = 1

Query: 132 RAKSLANAKQVHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDESSSRSVYPWNA 191
           R  SL   +Q+   +  NGL    F +T+LV ++   GS+++A ++F+   S+    ++ 
Sbjct: 46  RCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHT 105

Query: 192 LLRGTVMAGRQDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHALLIK 251
           +L+G   A   D    L  +  MR   VE  VY+F  ++K     + L  G + H LL+K
Sbjct: 106 MLKG--FAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 165

Query: 252 NGLVGSSILGTTLIDMYFKCGKIKLARQMFDEITERDIVVWGSMIAGFAHNRLQREALEY 311
           +G        T L +MY KC ++  AR++FD + ERD+V W +++AG++ N + R ALE 
Sbjct: 166 SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEM 225

Query: 312 TRRMIDDGIRPNSVILTSILPVIGDVGARRLGQEVHAFVIKTKNYSRLIYIQSALIDMYC 371
            + M ++ ++P+ + + S+LP +  +    +G+E+H + +++  +  L+ I +AL+DMY 
Sbjct: 226 VKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS-GFDSLVNISTALVDMYA 285

Query: 372 KCGDIGLGRAVFYGSKERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVAT 431
           KCG +   R +F G  ERN + W +++  Y  N   ++A+     M  EG +P  V+V  
Sbjct: 286 KCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG 345

Query: 432 ILPVCAKLRALKPGKEIHAYALKNYFLPNVSIVSSLMVMYSKCGVMDYSLKLFNAMEQRN 491
            L  CA L  L+ G+ IH  +++     NVS+V+SL+ MY KC  +D +  +F  ++ R 
Sbjct: 346 ALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT 405

Query: 492 VILWTTMIDSYIENQCLYEAIDIFRVMQLSKHRPDTVTMSRILYVCSELKLLKMGKEIHG 551
           ++ W  MI  + +N    +A++ F  M+    +PDT T   ++   +EL +    K IHG
Sbjct: 406 LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHG 465

Query: 552 QVLKRNFESVHFVSSEVVKLYGKCGALKMAKMVFEAVPVKGAMTWTAIIEAYGNNGELQE 611
            V++   +   FV++ +V +Y KCGA+ +A+++F+ +  +   TW A+I+ YG +G  + 
Sbjct: 466 VVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKA 525

Query: 612 AIHLFDQMRSSGFTPNHFTFKVVLSVCNEGGFVDDALRIFKLMTVTYKIKASEEHYSFVI 671
           A+ LF++M+     PN  TF  V+S C+  G V+  L+ F +M   Y I+ S +HY  ++
Sbjct: 526 ALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMV 585

Query: 672 AILTRFGRIEEA 684
            +L R GR+ EA
Sbjct: 586 DLLGRAGRLNEA 594

BLAST of CmoCh01G008940 vs. TAIR10
Match: AT3G57430.1 (AT3G57430.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 334.0 bits (855), Expect = 2.3e-91
Identity = 192/605 (31.74%), Postives = 322/605 (53.22%), Query Frame = 1

Query: 97  RQNKLKEALTIMDYLDQ--RGIPVNATTFSSLITACVRAKSLANAKQVHAHIRINGLE-N 156
           R N L+EA  ++ Y+D    GI  +   F +L+ A    + +   KQ+HAH+   G   +
Sbjct: 74  RSNLLREA--VLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVD 133

Query: 157 NEFLRTRLVHMYTACGSLEDAQKLFDESSSRSVYPWNALLRGTVMAGRQDYRSILSTYAE 216
           +  +   LV++Y  CG      K+FD  S R+   WN+L+    +   + +   L  +  
Sbjct: 134 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISS--LCSFEKWEMALEAFRC 193

Query: 217 MRRLGVELNVYSFANIIKSFAGA---SALTQGLKAHALLIKNGLVGSSILGTTLIDMYFK 276
           M    VE + ++  +++ + +       L  G + HA  ++ G + S I+ T L+ MY K
Sbjct: 194 MLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT-LVAMYGK 253

Query: 277 CGKIKLARQMFDEITERDIVVWGSMIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTSI 336
            GK+  ++ +      RD+V W ++++    N    EALEY R M+ +G+ P+   ++S+
Sbjct: 254 LGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSV 313

Query: 337 LPVIGDVGARRLGQEVHAFVIKTKNYSRLIYIQSALIDMYCKCGDIGLGRAVFYGSKERN 396
           LP    +   R G+E+HA+ +K  +     ++ SAL+DMYC C  +  GR VF G  +R 
Sbjct: 314 LPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRK 373

Query: 397 AICWTALMSGYALNGRLEQAVRSVIWMQQE-GFRPDVVTVATILPVCAKLRALKPGKEIH 456
              W A+++GY+ N   ++A+   I M++  G   +  T+A ++P C +  A    + IH
Sbjct: 374 IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIH 433

Query: 457 AYALKNYFLPNVSIVSSLMVMYSKCGVMDYSLKLFNAMEQRNVILWTTMIDSYIENQCLY 516
            + +K     +  + ++LM MYS+ G +D ++++F  ME R+++ W TMI  Y+ ++   
Sbjct: 434 GFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHE 493

Query: 517 EAIDIFRVMQ-----LSKH------RPDTVTMSRILYVCSELKLLKMGKEIHGQVLKRNF 576
           +A+ +   MQ     +SK       +P+++T+  IL  C+ L  L  GKEIH   +K N 
Sbjct: 494 DALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNL 553

Query: 577 ESVHFVSSEVVKLYGKCGALKMAKMVFEAVPVKGAMTWTAIIEAYGNNGELQEAIHLFDQ 636
            +   V S +V +Y KCG L+M++ VF+ +P K  +TW  II AYG +G  QEAI L   
Sbjct: 554 ATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRM 613

Query: 637 MRSSGFTPNHFTFKVVLSVCNEGGFVDDALRIFKLMTVTYKIKASEEHYSFVIAILTRFG 684
           M   G  PN  TF  V + C+  G VD+ LRIF +M   Y ++ S +HY+ V+ +L R G
Sbjct: 614 MMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAG 673

BLAST of CmoCh01G008940 vs. TAIR10
Match: AT4G21300.1 (AT4G21300.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 329.7 bits (844), Expect = 4.3e-90
Identity = 183/601 (30.45%), Postives = 320/601 (53.24%), Query Frame = 1

Query: 92  IQRFARQNKLKEALTIMDYLDQRGIPVNATTFSSLITACVRAKSLANAKQVHAHIRINGL 151
           I  F R   L +AL     +   G+  + +TF  L+ ACV  K+      +   +   G+
Sbjct: 110 ISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGM 169

Query: 152 ENNEFLRTRLVHMYTACGSLEDAQKLFDESSSRSVYPWNALLRGTVMAGRQDYRSILSTY 211
           + NEF+ + L+  Y   G ++   KLFD    +    WN +L G    G  D  S++  +
Sbjct: 170 DCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALD--SVIKGF 229

Query: 212 AEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHALLIKNGLVGSSILGTTLIDMYFKC 271
           + MR   +  N  +F  ++   A    +  G++ H L++ +G+     +  +L+ MY KC
Sbjct: 230 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC 289

Query: 272 GKIKLARQMFDEITERDIVVWGSMIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTSIL 331
           G+   A ++F  ++  D V W  MI+G+  + L  E+L +   MI  G+ P+++  +S+L
Sbjct: 290 GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 349

Query: 332 PVIGDVGARRLGQEVHAFVIKTKNYSRLIYIQSALIDMYCKCGDIGLGRAVFYGSKERNA 391
           P +         +++H ++++  + S  I++ SALID Y KC  + + + +F      + 
Sbjct: 350 PSVSKFENLEYCKQIHCYIMR-HSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 409

Query: 392 ICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVATILPVCAKLRALKPGKEIHAY 451
           + +TA++SGY  NG    ++    W+ +    P+ +T+ +ILPV   L ALK G+E+H +
Sbjct: 410 VVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGF 469

Query: 452 ALKNYFLPNVSIVSSLMVMYSKCGVMDYSLKLFNAMEQRNVILWTTMIDSYIENQCLYEA 511
            +K  F    +I  +++ MY+KCG M+ + ++F  + +R+++ W +MI    ++     A
Sbjct: 470 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 529

Query: 512 IDIFRVMQLSKHRPDTVTMSRILYVCSELKLLKMGKEIHGQVLKRNFESVHFVSSEVVKL 571
           IDIFR M +S    D V++S  L  C+ L     GK IHG ++K +  S  +  S ++ +
Sbjct: 530 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDM 589

Query: 572 YGKCGALKMAKMVFEAVPVKGAMTWTAIIEAYGNNGELQEAIHLFDQM-RSSGFTPNHFT 631
           Y KCG LK A  VF+ +  K  ++W +II A GN+G+L++++ LF +M   SG  P+  T
Sbjct: 590 YAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQIT 649

Query: 632 FKVVLSVCNEGGFVDDALRIFKLMTVTYKIKASEEHYSFVIAILTRFGRIEEAKWYEQMS 691
           F  ++S C   G VD+ +R F+ MT  Y I+  +EHY+ V+ +  R GR+ EA  YE + 
Sbjct: 650 FLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEA--YETVK 705

BLAST of CmoCh01G008940 vs. NCBI nr
Match: gi|659119310|ref|XP_008459588.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Cucumis melo])

HSP 1 Score: 1194.5 bits (3089), Expect = 0.0e+00
Identity = 592/694 (85.30%), Postives = 645/694 (92.94%), Query Frame = 1

Query: 1   MEISSSFTLSLHLHPFPPNPLAVAVAAANSNSGHRLSRIKTSTQTLTDTPPLRNKVVAKF 60
           MEISSSF +SLHL PFPPN L  A A  N   GH+LSRIK++T    D PP + K+V+KF
Sbjct: 1   MEISSSFLISLHLQPFPPNSLTAASAICNP--GHQLSRIKSTT----DIPPPKIKIVSKF 60

Query: 61  QNRKRPVFAERDAFPESLPLHTKNPHAIYKDIQRFARQNKLKEALTIMDYLDQRGIPVNA 120
           +NRKRP FAE+DAFP SLPLHTKNPHAIY+DIQRFARQNKLKEALTI+DY+DQ+GIPVNA
Sbjct: 61  RNRKRPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTILDYVDQQGIPVNA 120

Query: 121 TTFSSLITACVRAKSLANAKQVHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDE 180
           TTFSSLITACVR KS+ +AKQ+HAHIRINGLENNEF+RTRLVHMYTACGSLEDAQKLFDE
Sbjct: 121 TTFSSLITACVRTKSMTDAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEDAQKLFDE 180

Query: 181 SSSRSVYPWNALLRGTVMAGRQDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT 240
           SSS+SVYPWNALLRGTVMAGR+DYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASA T
Sbjct: 181 SSSKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFT 240

Query: 241 QGLKAHALLIKNGLVGSSILGTTLIDMYFKCGKIKLARQMFDEITERDIVVWGSMIAGFA 300
           QGLKAH+LLIKNGL+GSS+LGTTL+DMYFKCGKIKLARQMF+EITERD+VVWGS+IAGFA
Sbjct: 241 QGLKAHSLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFEEITERDVVVWGSIIAGFA 300

Query: 301 HNRLQREALEYTRRMIDDGIRPNSVILTSILPVIGDVGARRLGQEVHAFVIKTKNYSRLI 360
           HNRLQREAL YTRRMIDDGIRPNSVILT+ILPVIG++ ARRLGQEVHA+VIKTK+YS+ I
Sbjct: 301 HNRLQREALVYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQI 360

Query: 361 YIQSALIDMYCKCGDIGLGRAVFYGSKERNAICWTALMSGYALNGRLEQAVRSVIWMQQE 420
           +IQS+LIDMYCKCGDIG GRAVFY S ERNAICWTALMSGYALNGRLEQAVRSVIWMQQE
Sbjct: 361 FIQSSLIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQE 420

Query: 421 GFRPDVVTVATILPVCAKLRALKPGKEIHAYALKNYFLPNVSIVSSLMVMYSKCGVMDYS 480
           GFRPDVVTVATILPVCA+LRAL+PGKEIHAYA+KN FLPNVSIVSSLMVMYSKCGV+DYS
Sbjct: 421 GFRPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVIDYS 480

Query: 481 LKLFNAMEQRNVILWTTMIDSYIENQCLYEAIDIFRVMQLSKHRPDTVTMSRILYVCSEL 540
           LKLFN MEQRNVILWT MIDSY+ENQC +EAIDIFR MQLSKHRPDTVTM+RILYVCSEL
Sbjct: 481 LKLFNGMEQRNVILWTAMIDSYVENQCPHEAIDIFRAMQLSKHRPDTVTMARILYVCSEL 540

Query: 541 KLLKMGKEIHGQVLKRNFESVHFVSSEVVKLYGKCGALKMAKMVFEAVPVKGAMTWTAII 600
           K+LKMGKEIHGQVLKR FE VHFVSSE+VKLYGKCGA+KMAKMVFEA+PVKG MTWTAII
Sbjct: 541 KVLKMGKEIHGQVLKRKFEQVHFVSSELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAII 600

Query: 601 EAYGNNGELQEAIHLFDQMRSSGFTPNHFTFKVVLSVCNEGGFVDDALRIFKLMTVTYKI 660
           EAYG NGE QEAI LFD+MRS G +PNHFTFKVVLS+C E GFVD+ALRIFKLM+V YKI
Sbjct: 601 EAYGENGEFQEAIDLFDRMRSCGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKI 660

Query: 661 KASEEHYSFVIAILTRFGRIEEAKWYEQMSSSLS 695
           K SEEHYS VIA+LTRFGR+EEA+ Y QMSSSLS
Sbjct: 661 KPSEEHYSLVIAVLTRFGRMEEARRYVQMSSSLS 688

BLAST of CmoCh01G008940 vs. NCBI nr
Match: gi|778707902|ref|XP_011656084.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Cucumis sativus])

HSP 1 Score: 1194.1 bits (3088), Expect = 0.0e+00
Identity = 593/694 (85.45%), Postives = 643/694 (92.65%), Query Frame = 1

Query: 1   MEISSSFTLSLHLHPFPPNPLAVAVAAANSNSGHRLSRIKTSTQTLTDTPPLRNKVVAKF 60
           MEISSSF +SLHL PF PN LA A A  NS  GHRLSRIK++T    DTPP + K+V+KF
Sbjct: 1   MEISSSFIISLHLQPFTPNSLAPATAICNS--GHRLSRIKSTT----DTPPSKIKIVSKF 60

Query: 61  QNRKRPVFAERDAFPESLPLHTKNPHAIYKDIQRFARQNKLKEALTIMDYLDQRGIPVNA 120
           +NRKRP FAE+DAFP SLPLHTKNPHAIY+D+QRFARQNKLKEALTIMDY+DQ+GIPVNA
Sbjct: 61  RNRKRPTFAEKDAFPSSLPLHTKNPHAIYEDVQRFARQNKLKEALTIMDYVDQQGIPVNA 120

Query: 121 TTFSSLITACVRAKSLANAKQVHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDE 180
           TTFSSLITACVR KS+  AKQ+HAHIRINGLENNEF+RTRLVHMYTACGSLE+AQKLFDE
Sbjct: 121 TTFSSLITACVRTKSMTYAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEEAQKLFDE 180

Query: 181 SSSRSVYPWNALLRGTVMAGRQDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT 240
           SSS+SVYPWNALLRGTVMAGR+DYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASA T
Sbjct: 181 SSSKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFT 240

Query: 241 QGLKAHALLIKNGLVGSSILGTTLIDMYFKCGKIKLARQMFDEITERDIVVWGSMIAGFA 300
           QGLKAH LLIKNGL+GSS+LGTTL+DMYFKCGKIKLARQMF EITERD+VVWGS+IAGFA
Sbjct: 241 QGLKAHGLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWGSIIAGFA 300

Query: 301 HNRLQREALEYTRRMIDDGIRPNSVILTSILPVIGDVGARRLGQEVHAFVIKTKNYSRLI 360
           HNRLQREALEYTRRMIDDGIRPNSVILT+ILPVIG++ ARRLGQEVHA+VIKTK+YS+ I
Sbjct: 301 HNRLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQI 360

Query: 361 YIQSALIDMYCKCGDIGLGRAVFYGSKERNAICWTALMSGYALNGRLEQAVRSVIWMQQE 420
           +IQSALIDMYCKCGDIG GRAVFY S ERNAICWTALMSGYALNGRLEQAVRSVIWMQQE
Sbjct: 361 FIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQE 420

Query: 421 GFRPDVVTVATILPVCAKLRALKPGKEIHAYALKNYFLPNVSIVSSLMVMYSKCGVMDYS 480
           GFRPD+VTVATILPVCA+LRAL+PGKEIHAYA+KN FLPNVSIVSSLMVMYSKCGVMDY+
Sbjct: 421 GFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPNVSIVSSLMVMYSKCGVMDYT 480

Query: 481 LKLFNAMEQRNVILWTTMIDSYIENQCLYEAIDIFRVMQLSKHRPDTVTMSRILYVCSEL 540
           LKLFN MEQRNVILWT MIDSYIENQC +EAIDIFR MQLSKHRPDTVTMSRILY+CSE 
Sbjct: 481 LKLFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQ 540

Query: 541 KLLKMGKEIHGQVLKRNFESVHFVSSEVVKLYGKCGALKMAKMVFEAVPVKGAMTWTAII 600
           K+LKMGKEIHGQVLKR FE VHFVS+E+VKLYGKCGA+KMAKMVFEA+PVKG MTWTAII
Sbjct: 541 KMLKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAII 600

Query: 601 EAYGNNGELQEAIHLFDQMRSSGFTPNHFTFKVVLSVCNEGGFVDDALRIFKLMTVTYKI 660
           EAYG +GE QEAI LFD+MRS G +PNHFTFKVVLS+C E GFVD+ALRIFKLM+V YKI
Sbjct: 601 EAYGESGEFQEAIDLFDRMRSRGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKI 660

Query: 661 KASEEHYSFVIAILTRFGRIEEAKWYEQMSSSLS 695
           K SEEHYS VIAILTRFGR+EEA+ Y QM SSLS
Sbjct: 661 KPSEEHYSLVIAILTRFGRLEEARRYVQMLSSLS 688

BLAST of CmoCh01G008940 vs. NCBI nr
Match: gi|657968069|ref|XP_008375729.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Malus domestica])

HSP 1 Score: 972.6 bits (2513), Expect = 3.6e-280
Identity = 472/686 (68.80%), Postives = 577/686 (84.11%), Query Frame = 1

Query: 9   LSLHLHPFPPNPLAVAVAAANSNSGHRLSRIKTSTQTLTDTPPLRNKVVAKFQNRKRPVF 68
           LSLH H FPP+     +AAANSN  ++        QT       + K ++  + +K P F
Sbjct: 11  LSLHHHCFPPS---TRIAAANSNECNK------HRQTF------KRKALSSRRKQKTPTF 70

Query: 69  AERDAFPESLPLHTKNPHAIYKDIQRFARQNKLKEALTIMDYLDQRGIPVNATTFSSLIT 128
            E DAFP+SLPLHTKNPHAIYKDIQ FAR+NK+++AL+I+DYLDQ+GIPVN TTFS+LI 
Sbjct: 71  EEHDAFPDSLPLHTKNPHAIYKDIQSFARRNKIEKALSILDYLDQQGIPVNVTTFSALIA 130

Query: 129 ACVRAKSLANAKQVHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDESSSRSVYP 188
           ACVR +SL + KQ+H HIRINGLENN+F+RT+LV+MYT+ GS++DAQKLFDESSS++VY 
Sbjct: 131 ACVRTRSLDHGKQIHTHIRINGLENNDFIRTKLVNMYTSFGSVDDAQKLFDESSSKNVYS 190

Query: 189 WNALLRGTVMAGRQDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHAL 248
           WNALLRGTV+AG + Y  +L TY+EMR LGVELNVYSF+++IKSFAGASAL+QGLK HAL
Sbjct: 191 WNALLRGTVIAGGKRYGDVLDTYSEMRVLGVELNVYSFSSVIKSFAGASALSQGLKTHAL 250

Query: 249 LIKNGLVGSSILGTTLIDMYFKCGKIKLARQMFDEITERDIVVWGSMIAGFAHNRLQREA 308
           L+KNG + S+I+ T+L+D+YFKCGKIKLA ++F+E  +RD+VVWG+MIAGFAHNR QREA
Sbjct: 251 LVKNGFIDSAIVRTSLVDLYFKCGKIKLAHRLFEEFGDRDVVVWGAMIAGFAHNRRQREA 310

Query: 309 LEYTRRMIDDGIRPNSVILTSILPVIGDVGARRLGQEVHAFVIKTKNYSRLIYIQSALID 368
           LEY R M+D+GIR NSVILTSILPVIGDVGAR+LGQEVHAFV+KTK+YS+ I+IQS LID
Sbjct: 311 LEYVRMMVDEGIRLNSVILTSILPVIGDVGARKLGQEVHAFVVKTKSYSKQIFIQSGLID 370

Query: 369 MYCKCGDIGLGRAVFYGSKERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVT 428
           MYCKCGD+ +GR VFY SKERN ICWTALMSGY  NGR EQA+RS+IWMQQEGF+PD+VT
Sbjct: 371 MYCKCGDMDVGRRVFYHSKERNTICWTALMSGYVANGRPEQALRSIIWMQQEGFKPDLVT 430

Query: 429 VATILPVCAKLRALKPGKEIHAYALKNYFLPNVSIVSSLMVMYSKCGVMDYSLKLFNAME 488
           VATILPVCA+L+ LK GKEIHAYA+KN FLPNVSI+SSLMVMYSKCG+ +YS++LF+ ME
Sbjct: 431 VATILPVCAELKDLKRGKEIHAYAVKNCFLPNVSIISSLMVMYSKCGIFEYSIRLFDGME 490

Query: 489 QRNVILWTTMIDSYIENQCLYEAIDIFRVMQLSKHRPDTVTMSRILYVCSELKLLKMGKE 548
            RN+ILWT MIDSYI+N CLYEA+ + R M LSKHRPD+V M+RIL +C+ LK LK+GKE
Sbjct: 491 NRNIILWTAMIDSYIDNGCLYEALGLVRSMVLSKHRPDSVAMARILNICNGLKNLKLGKE 550

Query: 549 IHGQVLKRNFESVHFVSSEVVKLYGKCGALKMAKMVFEAVPVKGAMTWTAIIEAYGNNGE 608
           IHGQVLK+NFES+ FV++E+VK+YG+CGA+  AK VF+A+PVKG+MTWTAIIEAY  N  
Sbjct: 551 IHGQVLKKNFESIPFVTAEIVKMYGRCGAIDHAKSVFDAIPVKGSMTWTAIIEAYAYNDM 610

Query: 609 LQEAIHLFDQMRSSGFTPNHFTFKVVLSVCNEGGFVDDALRIFKLMTVTYKIKASEEHYS 668
            QEAI+LFDQMRS  FTPNHFTF+VVLS+C+  GFVDDA RIF LM+  YK+K SEE YS
Sbjct: 611 YQEAINLFDQMRSKDFTPNHFTFQVVLSICDRAGFVDDACRIFHLMSRVYKVKVSEEQYS 670

Query: 669 FVIAILTRFGRIEEAKWYEQMSSSLS 695
            +I +L RFGR+EEA+ +  +SSSLS
Sbjct: 671 LIIGLLDRFGRVEEAQRFTTLSSSLS 681

BLAST of CmoCh01G008940 vs. NCBI nr
Match: gi|694400553|ref|XP_009375361.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Pyrus x bretschneideri])

HSP 1 Score: 961.4 bits (2484), Expect = 8.2e-277
Identity = 467/685 (68.18%), Postives = 573/685 (83.65%), Query Frame = 1

Query: 9   LSLHLHPFPPNPLAVAVAAANSNSGHRLSRIKTSTQTLTDTPPLRNKVVAKFQNRKRPVF 68
           LSLH H FPP+     +AAANSN  ++        QT       + K ++  + +K P F
Sbjct: 11  LSLHHHCFPPS---TRIAAANSNDCNK------HRQTF------KRKALSSRRKQKTPTF 70

Query: 69  AERDAFPESLPLHTKNPHAIYKDIQRFARQNKLKEALTIMDYLDQRGIPVNATTFSSLIT 128
            E  AFP+SLPLHTKNPHAIYKDIQ FAR+NK+++AL+I+DYLDQ+GIPVNATTFS+LI 
Sbjct: 71  EEHHAFPDSLPLHTKNPHAIYKDIQSFARRNKIEKALSILDYLDQQGIPVNATTFSALIA 130

Query: 129 ACVRAKSLANAKQVHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDESSSRSVYP 188
           ACVR +SL + KQ+H HIRINGLENN+F+RT+LV+MYT+ GS++DAQKLFDESSS++VY 
Sbjct: 131 ACVRTRSLDHGKQIHTHIRINGLENNDFIRTKLVNMYTSFGSVDDAQKLFDESSSKNVYS 190

Query: 189 WNALLRGTVMAGRQDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHAL 248
           WNALLRGTV+AG + Y  +L TY+EMR LGVELNVYSF+++IKSFAGASAL+QGLK HAL
Sbjct: 191 WNALLRGTVIAGGKRYGDVLDTYSEMRVLGVELNVYSFSSVIKSFAGASALSQGLKTHAL 250

Query: 249 LIKNGLVGSSILGTTLIDMYFKCGKIKLARQMFDEITERDIVVWGSMIAGFAHNRLQREA 308
           L+KNG + S+I+ T+L+D+YFKCGKIKLA ++F+E  +RD+VVWG+MIAGFAHNR Q EA
Sbjct: 251 LVKNGFIDSAIVRTSLVDLYFKCGKIKLAHRVFEEFGDRDVVVWGAMIAGFAHNRRQGEA 310

Query: 309 LEYTRRMIDDGIRPNSVILTSILPVIGDVGARRLGQEVHAFVIKTKNYSRLIYIQSALID 368
           LEY R M+D+G+R NSVILTSILPVIGDVGAR+LGQE+HAFV+KTK+YS+ I+IQS LID
Sbjct: 311 LEYVRMMVDEGVRLNSVILTSILPVIGDVGARKLGQELHAFVVKTKSYSKQIFIQSGLID 370

Query: 369 MYCKCGDIGLGRAVFYGSKERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVT 428
           MYCKCGD+ +GR VFY SKERN ICWTALMSGY  NGR EQA+RS+IWMQQEGF+PD+VT
Sbjct: 371 MYCKCGDMDMGRRVFYHSKERNTICWTALMSGYVANGRPEQALRSIIWMQQEGFKPDLVT 430

Query: 429 VATILPVCAKLRALKPGKEIHAYALKNYFLPNVSIVSSLMVMYSKCGVMDYSLKLFNAME 488
           +ATILPVCA+L+ LK GKEIHAYA+KN FLPNVSI+SSLMVMYSKCG+ +YS++LF+ ME
Sbjct: 431 IATILPVCAELKDLKRGKEIHAYAVKNCFLPNVSIISSLMVMYSKCGIFEYSVRLFDGME 490

Query: 489 QRNVILWTTMIDSYIENQCLYEAIDIFRVMQLSKHRPDTVTMSRILYVCSELKLLKMGKE 548
            RN+ILWT MIDSYI+N CLYEA+ + R M LSKHRPD+V M+RIL +C+ LK LK+GKE
Sbjct: 491 NRNIILWTAMIDSYIDNGCLYEALGLVRSMVLSKHRPDSVAMARILNICNGLKNLKLGKE 550

Query: 549 IHGQVLKRNFESVHFVSSEVVKLYGKCGALKMAKMVFEAVPVKGAMTWTAIIEAYGNNGE 608
           IHGQVLK+NFES+ FV++E+VK+YG+CGA+  AK VF A+PVKG+MTWTAIIEAY  N  
Sbjct: 551 IHGQVLKKNFESIPFVTAEIVKMYGQCGAVDHAKSVFNAIPVKGSMTWTAIIEAYAYNDM 610

Query: 609 LQEAIHLFDQMRSSGFTPNHFTFKVVLSVCNEGGFVDDALRIFKLMTVTYKIKASEEHYS 668
            QEAI+LFDQMRS  FTPNHFTF+VVLS+C+  GFVDDA RI  LM+  YK+K SEE YS
Sbjct: 611 YQEAINLFDQMRSKDFTPNHFTFQVVLSICDRAGFVDDACRIVHLMSRVYKVKVSEEQYS 670

Query: 669 FVIAILTRFGRIEEAKWYEQMSSSL 694
            +I +L RFGRIEEA+ +  +SSSL
Sbjct: 671 LIIGLLDRFGRIEEARRFTTLSSSL 680

BLAST of CmoCh01G008940 vs. NCBI nr
Match: gi|645253041|ref|XP_008232399.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Prunus mume])

HSP 1 Score: 958.4 bits (2476), Expect = 7.0e-276
Identity = 467/677 (68.98%), Postives = 566/677 (83.60%), Query Frame = 1

Query: 20  PLAVAVAAANSN---SGHRLSRIKTSTQTLTDTPPLRNKVVAKFQNRKRPVFAERDAFPE 79
           PL +   + NSN   S   +    T+     +    + K + + Q +K P FAE DAFP+
Sbjct: 7   PLDIGHGSCNSNLTASPPYIWFTATNCNNCNNHQTFKLKALTRRQ-QKTPTFAENDAFPD 66

Query: 80  SLPLHTKNPHAIYKDIQRFARQNKLKEALTIMDYLDQRGIPVNATTFSSLITACVRAKSL 139
           SLPLHTKNPHAIYKDIQ FAR+NKLKEALTI+DYLDQ+GIPVNATTFSSLI ACVR +S 
Sbjct: 67  SLPLHTKNPHAIYKDIQSFARRNKLKEALTILDYLDQQGIPVNATTFSSLIAACVRTRSE 126

Query: 140 ANAKQVHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDESSSRSVYPWNALLRGT 199
            + KQ+H HIRINGLE+N+F+RT+LVHMYT+ GS+EDAQ+LFDESS++SVY WNALLRGT
Sbjct: 127 DHGKQIHTHIRINGLESNDFIRTKLVHMYTSFGSVEDAQQLFDESSTKSVYSWNALLRGT 186

Query: 200 VMAGRQDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHALLIKNGLVG 259
           V++G + YR +L TY EMR LGVELNVYSF++++KSFAGASAL+QGLK HALL+KNG + 
Sbjct: 187 VISGGRRYRDVLHTYTEMRALGVELNVYSFSSVMKSFAGASALSQGLKTHALLVKNGFID 246

Query: 260 SSILGTTLIDMYFKCGKIKLARQMFDEITERDIVVWGSMIAGFAHNRLQREALEYTRRMI 319
           SSI+ T+L+D+YFKCGKI+LA ++F+E  ERD+VVWG+MIAGFAHNR QREALEY R M+
Sbjct: 247 SSIVRTSLVDLYFKCGKIRLAHRVFEEFGERDVVVWGTMIAGFAHNRRQREALEYARMMV 306

Query: 320 DDGIRPNSVILTSILPVIGDVGARRLGQEVHAFVIKTKNYSRLIYIQSALIDMYCKCGDI 379
           D+GIRPNSVILTSILPVIGDVGAR+LGQEVHAFV+KTK+YS+ I+IQS LIDMYCKCGD+
Sbjct: 307 DEGIRPNSVILTSILPVIGDVGARKLGQEVHAFVLKTKSYSKQIFIQSGLIDMYCKCGDM 366

Query: 380 GLGRAVFYGSKERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVATILPVC 439
            +GR VFY SKERNAICWTALMSGY  NGR EQA+RSVIWMQQEGF+PD+VTVAT+LPVC
Sbjct: 367 DMGRRVFYHSKERNAICWTALMSGYVANGRPEQALRSVIWMQQEGFKPDLVTVATVLPVC 426

Query: 440 AKLRALKPGKEIHAYALKNYFLPNVSIVSSLMVMYSKCGVMDYSLKLFNAMEQRNVILWT 499
           A+L+ LK GKEIHAYA+KN FLPNVSI+SSLMVMYSKCG+  YS +LF+ MEQRNVILWT
Sbjct: 427 AELKDLKRGKEIHAYAVKNCFLPNVSIISSLMVMYSKCGIFKYSRRLFDGMEQRNVILWT 486

Query: 500 TMIDSYIENQCLYEAIDIFRVMQLSKHRPDTVTMSRILYVCSELKLLKMGKEIHGQVLKR 559
            MIDSYI+N CLYEA+ + R M LSKHRPD+V  +RIL  C+ LK LK+GKEIHGQVLK+
Sbjct: 487 AMIDSYIDNGCLYEALGVIRSMLLSKHRPDSVATARILTTCNGLKNLKLGKEIHGQVLKK 546

Query: 560 NFESVHFVSSEVVKLYGKCGALKMAKMVFEAVPVKGAMTWTAIIEAYGNNGELQEAIHLF 619
           +FES+ FV+SE+VK+YG CG +  AK  F  +PVKG+MTWTAIIEAY  NG  ++AI LF
Sbjct: 547 DFESIPFVASEIVKMYGHCGEVDHAKSAFNIIPVKGSMTWTAIIEAYAYNGMYRDAIDLF 606

Query: 620 DQMRSSGFTPNHFTFKVVLSVCNEGGFVDDALRIFKLMTVTYKIKASEEHYSFVIAILTR 679
           D+MRS  FTPNHFTF+VVLS+C++ GFV+DA RIF LM+  YK+K SEE YS +I +LTR
Sbjct: 607 DEMRSKDFTPNHFTFQVVLSICDQAGFVNDACRIFHLMSRVYKVKVSEEQYSLIIGLLTR 666

Query: 680 FGRIEEAKWYEQMSSSL 694
           FGR++EA+ + Q+SSSL
Sbjct: 667 FGRVKEAQRFLQLSSSL 682

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP115_ARATH1.4e-25263.61Pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Arabidop... [more]
PP320_ARATH2.2e-9632.38Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... [more]
PPR32_ARATH6.2e-9131.70Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
PP285_ARATH4.0e-9031.74Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... [more]
PP333_ARATH7.6e-8930.45Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
A0A0A0KXW0_CUCSA0.0e+0085.45Uncharacterized protein OS=Cucumis sativus GN=Csa_5G649310 PE=4 SV=1[more]
W9T1A9_9ROSA8.3e-27672.24Uncharacterized protein OS=Morus notabilis GN=L484_001633 PE=4 SV=1[more]
A0A061EEF5_THECC6.4e-26866.28Pentatricopeptide repeat (PPR-like) superfamily protein OS=Theobroma cacao GN=TC... [more]
A0A067LLI4_JATCU2.0e-26665.85Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17232 PE=4 SV=1[more]
B9IQB5_POPTR6.6e-26565.31Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POP... [more]
Match NameE-valueIdentityDescription
AT1G71460.18.0e-25463.61 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT4G18750.11.2e-9732.38 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G11290.13.5e-9231.70 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G57430.12.3e-9131.74 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G21300.14.3e-9030.45 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659119310|ref|XP_008459588.1|0.0e+0085.30PREDICTED: pentatricopeptide repeat-containing protein At1g71460, chloroplastic ... [more]
gi|778707902|ref|XP_011656084.1|0.0e+0085.45PREDICTED: pentatricopeptide repeat-containing protein At1g71460, chloroplastic ... [more]
gi|657968069|ref|XP_008375729.1|3.6e-28068.80PREDICTED: pentatricopeptide repeat-containing protein At1g71460, chloroplastic ... [more]
gi|694400553|ref|XP_009375361.1|8.2e-27768.18PREDICTED: pentatricopeptide repeat-containing protein At1g71460, chloroplastic ... [more]
gi|645253041|ref|XP_008232399.1|7.0e-27668.98PREDICTED: pentatricopeptide repeat-containing protein At1g71460, chloroplastic ... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G008940.1CmoCh01G008940.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 290..320
score: 0.018coord: 494..519
score: 0.0044coord: 465..492
score: 0.14coord: 262..289
score: 0.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 390..437
score: 5.2E-8coord: 593..638
score: 8.7
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 107..152
score: 0.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 262..291
score: 3.8E-4coord: 290..323
score: 0.0019coord: 494..527
score: 4.6E-5coord: 595..627
score: 2.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 189..221
score: 5.218coord: 460..490
score: 7.322coord: 425..459
score: 5.623coord: 627..657
score: 7.103coord: 119..153
score: 8.331coord: 257..287
score: 7.487coord: 663..694
score: 5.097coord: 359..389
score: 5.47coord: 592..626
score: 12.66coord: 526..560
score: 6.478coord: 491..525
score: 9.361coord: 222..256
score: 5.864coord: 288..322
score: 10.611coord: 154..188
score: 8.32coord: 84..118
score: 6.281coord: 390..424
score: 10
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 387..426
score: 7.0E-4coord: 267..318
score: 7.0E-4coord: 593..620
score: 7.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 461..683
score: 2.5E-280coord: 1..20
score: 2.5E-280coord: 58..66
score: 2.5E-280coord: 141..425
score: 2.5E
NoneNo IPR availablePANTHERPTHR24015:SF755SUBFAMILY NOT NAMEDcoord: 1..20
score: 2.5E-280coord: 461..683
score: 2.5E-280coord: 58..66
score: 2.5E-280coord: 141..425
score: 2.5E

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh01G008940CmaCh01G008500Cucurbita maxima (Rimu)cmacmoB468
CmoCh01G008940Cp4.1LG02g10870Cucurbita pepo (Zucchini)cmocpeB448
The following gene(s) are paralogous to this gene:

None