CmoCh01G008110 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh01G008110
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionDNA binding protein, putative
LocationCmo_Chr01 : 4246123 .. 4249045 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCCCTCTCTCTCAAGTCTCATCTCCTCTCCCTTCCTCTTCATCTTCTTCTTCCTCCAATCTCTCCATTTCTCTGCTTCTTCCTCTTCCTCCTTTCTCTGCAATCGCCTTACCAGGTTTGTTTTCTCTACTCTGCGTCTCTTTCTCCATTGTTTTCTTTCTTTTCTTCTTCGATATGTTCTTCTGGTGTTTACTAGGTTTCTGGAGAAGTGAAGAGTTCCACAACTTTATGAATTCCAGGATTGTTGATTCTGATGATTCGTTTAGCCTCTGCTGAGCCTTTTCAATTTTAATTTCAGGTCCTTGTTTTGGCGGACTGAGACTACTATACCTATATTTCCTCCCCGGTTTTCTTGCCACTGCTGATGGCTGTCCAGGTAAATCCTTCACACCGCTTTTGTTTACGTTTTCTGCACCTCTTAACTTTTCTTGGAAATTTTTTTCTCCCAAACTTGATTGATTGGTTGGCTATGTCTCTGTTTGGATTTGAGTACTGAATTCCTGATTTTCAGTACTCAATTCTCACTTCTTGGGTTTTCTTTAGTAACCTTCTTCTTGTTGTTTACTGAGTAATTGACACAAAAACTTGTCCTTTAGCTTTTGTTGGTTGAGTACTCCTACGGACTTTGCTTTTGTTTTATTGCCCAATATATTGAGCTATGTTGTATTGTTACCAGGGCTATGATGTTACATTTATGAAATGGGTTGCTGCTAATTGATGATGGGATTCTACAGCTCCACCAGTCAGTTTCTTGTGGTCTCTAACTTTCTTATTTCAACATGGAATGCAGGAAAAGAATGATGGCACGCTGTCAAACAGCTCAATTGGAGCTAACAATTGCCTTTCTAGTGATGGGACACAACTGGATCCACTGATGCGCGTTAGCTCCCTATGTTCCTATGGGAATGAAAGTTCATTGAAGGTAACCTAATTAACTTCTGCAATTTCTCAATTCTCCTATTTTGGAAGGATTTGGGTTTGAGTTCAGGCACTCTAATGTATGAACAGGTTAGGAAGCCCTACACTATTTCAAAACAAAGGGAAAAATGGACAGAGGAAGAGCATCAGAGGTTCCTTGAAGCTCTGAAACTCTATGGTCGTGGCTGGCGTCAGATCAAAGGTAAGGCTGTCTGAAATTAGTTATCTAAATCTGGTGTTTGCAATACCCAACCCATCATTTAGCGCGCTACCTTGATCTTCCTGCAGAACATGTAGGTACCAAAACAGCTGTTCAGATCCGAAGCCATGCTCAGAAATTTTTCTCTAAGGTCAAAAATGCGCTTTGTTTTAGTAACCCCCCAAACTAAGAATCATTACCAAACAGAATATAATTTAGGATGATAGTGGATTTTTCACCAAAATAGATCGTCACCAAACCCTTTACGCTATTTTCTTACACACTTTATGACCAAACATTCCCACACTCAACTTTTATTTTGTCTGTGTTTCAGGTAGTGCGAGAGCCTAGTGGCAGCAATGACAGCTCCATTAACCCAATTGAGATTCCTCCACCTCGACCAAAAAGGAAACCACTGCATCCTTACCCTCGTAAAGCAGTCGATTCTCTTAAGGCAATTTCAGTTGCAAGAGAACCTGAGAGGTCTCCATCTCCAAACCTATCAATTGCCGAAAAAGAGACCCAATCGCCCACCTCCGTACTGACTGCGTTCAGTTCGGATGATCAAATTTCTACGGTTTCGGAGCAGCATAATAGATGTTCATCACCTATTTCACAAGCTGTTGACATACAGTCAACTAGATTGCCCTCTGTTAGGAAAGGGGAGATGTTATTGCTCGAATCATCCTCCGAGCGGTTCCCAGAAGACTTTCTTACTCTGGTAATTTGAAATGTCCTTTTAATCTTCCACTTCATTTTCCTTTATGCACTTTACTTGACATCTGGGATCTGACTCTTTTTCTTTTTCTCTCTTTCCTAAACATTCAGAAATCCAAGCCAGGATCAGCATCTAAGAAATTAGACAACAAGTTGCATTCTCCTGTTAAAAGCATAAAGCTTTTTGGAAGAACAGTAATGGTTGATGATGACAAAAAACCATCCTTACATGATTTTGAAGTAACTAAATCGTTGGTACTTGATGGTGAGAGTAAGAATGACTGTGGAGTGTATGCTGAGAAGCCTGTTCAGATGCTACCTTCAAAACATATGGATGTAGATTTATCTCTTCGGATAGATAACAATGGTGATTGGAATATGTCACCTGGTGGAGCACCTACTAACAACACCGCACTGAATCAGGAGAATAGTGTCCTTTATGTTGAGGCGATTGCTAATGCTCCTCAAACTTGTTGGTCTTTGTATCAAAGTGTACCATATTTTTACCTTGCTCCACCTGATCAAACTAACCAAGTTATGGAAGAAAGGATGCAAAATGACAATTCTGTAGAAAGTTCGTGTGTGGATTCATGTTCTGGCTCCTCGAGTAAGGATAAGAATGAAAACCAGAGCCCCGAATTCGAATGTCAAGACCCTTGTCTGGTAGGAAGAGGTAATAGAAATGAAAGTAAGAAGGGGTTTGTGCCTTACAAGAGATGCTTGGCTCAGAGAGAGGCAAGCTCTTCGTTCATTGTTTCAGAAGAGAGAGAAGGCCGGAGAGTTCGAGTTTGCTTATAGCCTCTGCAAAATTACAGTGGAACTCGATCAGCAACAGATTTAAAGTCGATAAAAGGAAATGACCAAGATGCTTTGACATGGGTTTCTGAGTTTTTTTTTTCTCTTTAGCTTGAGATGAAAAAATGGAGGCCAAACTTGTAGCATGTAATATCTAAAGTAGCAGGAGGGGCGAAGCCTATAAGGGGTTGCGCAACAACTTCTATCCTGTCTATTCCTGGGTATTTGAGTGACAATTAATCAACCTGTAAAACAAAACGGTGTTGCTCTTTGACTTCTTAACATATTTGCAGA

mRNA sequence

TGCCCTCTCTCTCAAGTCTCATCTCCTCTCCCTTCCTCTTCATCTTCTTCTTCCTCCAATCTCTCCATTTCTCTGCTTCTTCCTCTTCCTCCTTTCTCTGCAATCGCCTTACCAGGTCCTTGTTTTGGCGGACTGAGACTACTATACCTATATTTCCTCCCCGGTTTTCTTGCCACTGCTGATGGCTGTCCAGGAAAAGAATGATGGCACGCTGTCAAACAGCTCAATTGGAGCTAACAATTGCCTTTCTAGTGATGGGACACAACTGGATCCACTGATGCGCGTTAGCTCCCTATGTTCCTATGGGAATGAAAGTTCATTGAAGGTTAGGAAGCCCTACACTATTTCAAAACAAAGGGAAAAATGGACAGAGGAAGAGCATCAGAGGTTCCTTGAAGCTCTGAAACTCTATGGTCGTGGCTGGCGTCAGATCAAAGAACATGTAGGTACCAAAACAGCTGTTCAGATCCGAAGCCATGCTCAGAAATTTTTCTCTAAGGTAGTGCGAGAGCCTAGTGGCAGCAATGACAGCTCCATTAACCCAATTGAGATTCCTCCACCTCGACCAAAAAGGAAACCACTGCATCCTTACCCTCGTAAAGCAGTCGATTCTCTTAAGGCAATTTCAGTTGCAAGAGAACCTGAGAGGTCTCCATCTCCAAACCTATCAATTGCCGAAAAAGAGACCCAATCGCCCACCTCCGTACTGACTGCGTTCAGTTCGGATGATCAAATTTCTACGGTTTCGGAGCAGCATAATAGATGTTCATCACCTATTTCACAAGCTGTTGACATACAGTCAACTAGATTGCCCTCTGTTAGGAAAGGGGAGATGTTATTGCTCGAATCATCCTCCGAGCGGTTCCCAGAAGACTTTCTTACTCTGAAATCCAAGCCAGGATCAGCATCTAAGAAATTAGACAACAAGTTGCATTCTCCTGTTAAAAGCATAAAGCTTTTTGGAAGAACAGTAATGGTTGATGATGACAAAAAACCATCCTTACATGATTTTGAAGTAACTAAATCGTTGGTACTTGATGGTGAGAGTAAGAATGACTGTGGAGTGTATGCTGAGAAGCCTGTTCAGATGCTACCTTCAAAACATATGGATGTAGATTTATCTCTTCGGATAGATAACAATGGTGATTGGAATATGTCACCTGGTGGAGCACCTACTAACAACACCGCACTGAATCAGGAGAATAGTGTCCTTTATGTTGAGGCGATTGCTAATGCTCCTCAAACTTGTTGGTCTTTGTATCAAAGTGTACCATATTTTTACCTTGCTCCACCTGATCAAACTAACCAAGTTATGGAAGAAAGGATGCAAAATGACAATTCTGTAGAAAGTTCGTGTGTGGATTCATGTTCTGGCTCCTCGAGTAAGGATAAGAATGAAAACCAGAGCCCCGAATTCGAATGTCAAGACCCTTGTCTGGTAGGAAGAGGTAATAGAAATGAAAGTAAGAAGGGGTTTGTGCCTTACAAGAGATGCTTGGCTCAGAGAGAGGCAAGCTCTTCGTTCATTGTTTCAGAAGAGAGAGAAGGCCGGAGAGTTCGAGTTTGCTTATAGCCTCTGCAAAATTACAGTGGAACTCGATCAGCAACAGATTTAAAGTCGATAAAAGGAAATGACCAAGATGCTTTGACATGGGTTTCTGAGTTTTTTTTTTCTCTTTAGCTTGAGATGAAAAAATGGAGGCCAAACTTGTAGCATGTAATATCTAAAGTAGCAGGAGGGGCGAAGCCTATAAGGGGTTGCGCAACAACTTCTATCCTGTCTATTCCTGGGTATTTGAGTGACAATTAATCAACCTGTAAAACAAAACGGTGTTGCTCTTTGACTTCTTAACATATTTGCAGA

Coding sequence (CDS)

ATGGCTGTCCAGGAAAAGAATGATGGCACGCTGTCAAACAGCTCAATTGGAGCTAACAATTGCCTTTCTAGTGATGGGACACAACTGGATCCACTGATGCGCGTTAGCTCCCTATGTTCCTATGGGAATGAAAGTTCATTGAAGGTTAGGAAGCCCTACACTATTTCAAAACAAAGGGAAAAATGGACAGAGGAAGAGCATCAGAGGTTCCTTGAAGCTCTGAAACTCTATGGTCGTGGCTGGCGTCAGATCAAAGAACATGTAGGTACCAAAACAGCTGTTCAGATCCGAAGCCATGCTCAGAAATTTTTCTCTAAGGTAGTGCGAGAGCCTAGTGGCAGCAATGACAGCTCCATTAACCCAATTGAGATTCCTCCACCTCGACCAAAAAGGAAACCACTGCATCCTTACCCTCGTAAAGCAGTCGATTCTCTTAAGGCAATTTCAGTTGCAAGAGAACCTGAGAGGTCTCCATCTCCAAACCTATCAATTGCCGAAAAAGAGACCCAATCGCCCACCTCCGTACTGACTGCGTTCAGTTCGGATGATCAAATTTCTACGGTTTCGGAGCAGCATAATAGATGTTCATCACCTATTTCACAAGCTGTTGACATACAGTCAACTAGATTGCCCTCTGTTAGGAAAGGGGAGATGTTATTGCTCGAATCATCCTCCGAGCGGTTCCCAGAAGACTTTCTTACTCTGAAATCCAAGCCAGGATCAGCATCTAAGAAATTAGACAACAAGTTGCATTCTCCTGTTAAAAGCATAAAGCTTTTTGGAAGAACAGTAATGGTTGATGATGACAAAAAACCATCCTTACATGATTTTGAAGTAACTAAATCGTTGGTACTTGATGGTGAGAGTAAGAATGACTGTGGAGTGTATGCTGAGAAGCCTGTTCAGATGCTACCTTCAAAACATATGGATGTAGATTTATCTCTTCGGATAGATAACAATGGTGATTGGAATATGTCACCTGGTGGAGCACCTACTAACAACACCGCACTGAATCAGGAGAATAGTGTCCTTTATGTTGAGGCGATTGCTAATGCTCCTCAAACTTGTTGGTCTTTGTATCAAAGTGTACCATATTTTTACCTTGCTCCACCTGATCAAACTAACCAAGTTATGGAAGAAAGGATGCAAAATGACAATTCTGTAGAAAGTTCGTGTGTGGATTCATGTTCTGGCTCCTCGAGTAAGGATAAGAATGAAAACCAGAGCCCCGAATTCGAATGTCAAGACCCTTGTCTGGTAGGAAGAGGTAATAGAAATGAAAGTAAGAAGGGGTTTGTGCCTTACAAGAGATGCTTGGCTCAGAGAGAGGCAAGCTCTTCGTTCATTGTTTCAGAAGAGAGAGAAGGCCGGAGAGTTCGAGTTTGCTTATAG
Homology
[Close]
BLAST of CmoCh01G008110 vs. Swiss-Prot
Match: RVE7_ARATH (Protein REVEILLE 7 OS=Arabidopsis thaliana GN=RVE7 PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 6.5e-52
Identity = 132/284 (46.48%), Postives = 177/284 (62.32%), Query Frame = 1 

Query: 1   MAVQEKNDGTLSNSSIGANNCLSSDGTQLDPLMRVSSLCSYGNESSLKVRKPYTISKQRE 60
           MA +++++   SN   G+  C S++G  ++P        S+  E+ +KVRKPYT++KQRE
Sbjct: 27  MAAEDRSEELSSNVENGS--CNSNEG--INP-----ETSSHWIENVVKVRKPYTVTKQRE 86

Query: 61  KWTEEEHQRFLEALKLYGRGWRQIKEHVGTKTAVQIRSHAQKFFSKVVREPSGSNDSSIN 120
           KW+EEEH RFLEA+KLYGRGWRQI+EH+GTKTAVQIRSHAQKFFSK+ +E    ++ S+ 
Sbjct: 87  KWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKFFSKMAQEADSRSEGSVK 146

Query: 121 PIEIPPPRPKRKPLHPYPRKAVDSLKAISVAREPERSPSPNLSIAEKETQSPTSVLTAFS 180
            I IPPPRPKRKP HPYPRK+              +SP PNLS  EK T+SPTSVL++F 
Sbjct: 147 AIVIPPPRPKRKPAHPYPRKSPVPY---------TQSPPPNLSAMEKGTKSPTSVLSSFG 206

Query: 181 SDDQISTVSEQHNRCSSPISQAVDIQSTRLPSVRKGEMLLLESSSERFPEDFLTLKSKPG 240
           S+DQ+       NRCSSP S   DIQS    S+ K       +S + F +D     S  G
Sbjct: 207 SEDQV-------NRCSSPNSCTSDIQSIGATSIDKKNN--YTTSKQPFKDD-----SDIG 266

Query: 241 SASKKLDNKLHSPVKSIKLFGRTVMV-DDDKKPSLHDFEVTKSL 284
           S          +P+ SI LFG+ V+V ++  KPS ++ +  K +
Sbjct: 267 S----------TPISSITLFGKIVLVAEESHKPSSYNDDDLKQM 268

[Close]
BLAST of CmoCh01G008110 vs. Swiss-Prot
Match: RVE1_ARATH (Protein REVEILLE 1 OS=Arabidopsis thaliana GN=RVE1 PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 3.3e-48
Identity = 123/269 (45.72%), Postives = 161/269 (59.85%), Query Frame = 1 

Query: 42  GNESSLKVRKPYTISKQREKWTEEEHQRFLEALKLYGRGWRQIKEHVGTKTAVQIRSHAQ 101
           GN+ + KVRKPYTI+K+RE+WT+EEH++F+EALKLYGR WR+I+EHVG+KTAVQIRSHAQ
Sbjct: 38  GNDYAPKVRKPYTITKERERWTDEEHKKFVEALKLYGRAWRRIEEHVGSKTAVQIRSHAQ 97

Query: 102 KFFSKVVREPSGSNDSSINPIEIPPPRPKRKPLHPYPRKAVDSLKAISVAREPERSPSPN 161
           KFFSKV RE +G + SS+ PI IPPPRPKRKP HPYPRK  +       A +  RS SP+
Sbjct: 98  KFFSKVAREATGGDGSSVEPIVIPPPRPKRKPAHPYPRKFGNE------ADQTSRSVSPS 157

Query: 162 LSIAEKETQSPTSVLTAFSSDDQISTVSEQHNRCSSPISQAVDIQSTRLPSVRKGEMLLL 221
               E++TQSPTSVL+   S+   S  S   NR  SP+S A    +              
Sbjct: 158 ----ERDTQSPTSVLSTVGSEALCSLDSSSPNRSLSPVSSASPPAAL------------- 217

Query: 222 ESSSERFPEDFLTLKSK--PGSASKKLDNKLHSPVK-SIKLFGRTVMVDDDKKPSLHDFE 281
            +++   PE+  TLK +  P       ++ +  P K S+KLFG+TV+V D    S     
Sbjct: 218 -TTTANAPEELETLKLELFPSERLLNRESSIKEPTKQSLKLFGKTVLVSDSGMSS----S 266

Query: 282 VTKSLVLDGESKNDCGVYAEKPVQMLPSK 308
           +T S             Y + P+Q LP K
Sbjct: 278 LTTS------------TYCKSPIQPLPRK 266

[Close]
BLAST of CmoCh01G008110 vs. Swiss-Prot
Match: RVE7L_ARATH (Protein REVEILLE 7-like OS=Arabidopsis thaliana GN=RVE7L PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.4e-45
Identity = 109/226 (48.23%), Postives = 147/226 (65.04%), Query Frame = 1 

Query: 3   VQEKNDGTLSNSSIGANNCLSSDGTQLDPLMRVSSLCSYGNESSLKVRKPYTISKQREKW 62
           +Q++++   SN   G+  C S++G  ++P        S+  E+ +KVRKPYT++KQREKW
Sbjct: 18  LQDRSEELSSNVENGS--CNSNEG--INP-----ETSSHWIENVVKVRKPYTVTKQREKW 77

Query: 63  TEEEHQRFLEALKLYGRGWRQIKEHVGTKTAVQIRSHAQKFFSKVVREPSGSNDSSINPI 122
           +EEEH RFLEA+KLYGRGWRQI+EH+GTKTAVQIRSHAQKFFSK+ +E    ++ S+  I
Sbjct: 78  SEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKFFSKMAQEADSRSEGSVKAI 137

Query: 123 EIPPPRPKRKPLHPYPRKAVDSLKAISVAREPERSPSPNLSIAEKETQSPTSVLTAFSSD 182
            IPPPRPKRKP HPYPRK+              +SP PNLS  EK T+SPTSVL++F S+
Sbjct: 138 VIPPPRPKRKPAHPYPRKSPVPY---------TQSPPPNLSAMEKGTKSPTSVLSSFGSE 197

Query: 183 DQISTVSEQHNRCSSPISQAVDIQSTRLPSVRK-GEMLLLESSSER 228
           DQ       +     P     DI ST + S+   G+++L+   S +
Sbjct: 198 DQ-----NNYTTSKQPFKDDSDIGSTPISSITLFGKIVLVAEESHK 220

[Close]
BLAST of CmoCh01G008110 vs. Swiss-Prot
Match: RVE2_ARATH (Protein REVEILLE 2 OS=Arabidopsis thaliana GN=RVE2 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.6e-37
Identity = 118/266 (44.36%), Postives = 155/266 (58.27%), Query Frame = 1 

Query: 34  RVSSLCSYGNESS-----LKVRKPYTISKQREKWTEEEHQRFLEALKLYGRGWRQIKEHV 93
           R  SLCS    SS     LK RKPYTI+KQREKWTE EH++F+EALKLYGR WR+I+EHV
Sbjct: 6   RCESLCSDELISSSDAFYLKTRKPYTITKQREKWTEAEHEKFVEALKLYGRAWRRIEEHV 65

Query: 94  GTKTAVQIRSHAQKFFSKVVREPSGSNDSSINPIEIPPPRPKRKPLHPYPRKAVDSLKAI 153
           GTKTAVQIRSHAQKFF+KV R+   S++S    IEIPPPRPKRKP+HPYPRK V     I
Sbjct: 66  GTKTAVQIRSHAQKFFTKVARDFGVSSES----IEIPPPRPKRKPMHPYPRKLV-----I 125

Query: 154 SVAREPERSP-SPNLSIAEKETQSPTSVLTAFSSDDQISTVSEQHNRCSSPISQAVDIQS 213
             A+E   +  + +  I +++ +SPTSVL+A  SD   S  S   N  S+ +S   + +S
Sbjct: 126 PDAKEMVYAELTGSKLIQDEDNRSPTSVLSAHGSDGLGSIGSNSPNSSSAELSSHTE-ES 185

Query: 214 TRLPSVRKGEMLLLESSSERFPEDFLTLKSKPGSASKKLDNKLHSPVKSIKLFGRT---- 273
             L +  K  + L   +      D+ +  S   S   K   KL+S  +S++    T    
Sbjct: 186 LSLEAETKQSLKLFGKTF--VVGDYNSSMSCDDSEDGK--KKLYSETQSLQCSSSTSENA 245

Query: 274 ---VMVDDDKKPSLHDFEVTKSLVLD 287
              V+V + K+     F   KS V +
Sbjct: 246 ETEVVVSEFKRSERSAFSQLKSSVTE 257

[Close]
BLAST of CmoCh01G008110 vs. Swiss-Prot
Match: CCA1_ARATH (Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.4e-30
Identity = 69/103 (66.99%), Postives = 80/103 (77.67%), Query Frame = 1 

Query: 40  SYGNESSLKVRKPYTISKQREKWTEEEHQRFLEALKLYGRGWRQIKEHVGTKTAVQIRSH 99
           S G +  +K RKPYTI+KQRE+WTEEEH RF+EAL+LYGR W++I+EHV TKTAVQIRSH
Sbjct: 5   SSGEDLVIKTRKPYTITKQRERWTEEEHNRFIEALRLYGRAWQKIEEHVATKTAVQIRSH 64

Query: 100 AQKFFSKVVR--EPSGSNDSSINPIEIPPPRPKRKPLHPYPRK 141
           AQKFFSKV +  E  G        I IPPPRPKRKP +PYPRK
Sbjct: 65  AQKFFSKVEKEAEAKGVAMGQALDIAIPPPRPKRKPNNPYPRK 107

[Close]
BLAST of CmoCh01G008110 vs. TrEMBL
Match: A0A0A0LSL2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G032440 PE=4 SV=1)

HSP 1 Score: 709.1 bits (1829), Expect = 3.4e-201
Identity = 376/478 (78.66%), Postives = 406/478 (84.94%), Query Frame = 1 

Query: 3   VQEKNDGTLSNSSIGANNCLSSDGTQLDPLMRVSSLCSYGNESSLKVRKPYTISKQREKW 62
           V EKN+GTLSN SI ANN LS+DG QLDPLMRVSSL SYGNES+LKVRKPYTISKQREKW
Sbjct: 333 VAEKNEGTLSNGSIAANNGLSNDGAQLDPLMRVSSLSSYGNESALKVRKPYTISKQREKW 392

Query: 63  TEEEHQRFLEALKLYGRGWRQIKEHVGTKTAVQIRSHAQKFFSKVVREPSGSNDSSINPI 122
           TEEEHQRFLEALKLYGRGWRQIKEHVGTKTAVQIRSHAQKFFSKVVRE SGSN+SSINPI
Sbjct: 393 TEEEHQRFLEALKLYGRGWRQIKEHVGTKTAVQIRSHAQKFFSKVVRESSGSNESSINPI 452

Query: 123 EIPPPRPKRKPLHPYPRKAVDSLKAISVAREPERSPSPNLSIAEKETQSPTSVLTAFSSD 182
           EIPPPRPKRKPLHPYPRKAVDSLKAISVARE ERSPSPNLS+AEKET SPTSVLTAFSSD
Sbjct: 453 EIPPPRPKRKPLHPYPRKAVDSLKAISVARESERSPSPNLSLAEKETHSPTSVLTAFSSD 512

Query: 183 DQISTVSEQHNRCSSPISQAVDIQSTRLPSVRKGE------------MLLLESSSERFPE 242
           DQIS VSEQHNRC SPISQAVD+Q TR   VRKGE            ML LESSSERFPE
Sbjct: 513 DQISAVSEQHNRCPSPISQAVDMQPTRSSPVRKGELYLQSIVGEEKGMLSLESSSERFPE 572

Query: 243 DFLTLKSKPGSASKKLDNKLHSPVKSIKLFGRTVMVDDDKKPSLHDFEVTKSLVLDGESK 302
           +FLTLK KPGSASKK+DNKLHSPVKSIKLFGRTVMV +DK+PS  DFEVT++L  + +SK
Sbjct: 573 EFLTLKFKPGSASKKVDNKLHSPVKSIKLFGRTVMVTNDKQPSPLDFEVTETLTFEDDSK 632

Query: 303 NDCGVYAEKPVQMLPSKHMDVDLSLRIDNNGDWNMSPGGAPTNNTALNQENSVLYVEAIA 362
           ++C VYAE  V+ML SKHMDV L+L +DNNGD NMSPGGAP+  T   Q  SV YV+A+ 
Sbjct: 633 SECKVYAENSVEMLTSKHMDVSLALGMDNNGDLNMSPGGAPSL-TLGKQNRSVPYVKALP 692

Query: 363 NAPQTCWSLYQSVPYFYLAPPDQ------TNQVMEERMQNDNSVESSCVDSCSGSSSKDK 422
           NA QTCWSLYQ+VPYFYLAP DQ      T+ +MEER+QNDNS ESS  DSCSGS  KD+
Sbjct: 693 NASQTCWSLYQTVPYFYLAPSDQTSTGTSTDHIMEERIQNDNSQESSFADSCSGSPRKDQ 752

Query: 423 NENQSPEFECQDPCLVGRGNRNESKKGFVPYKRCLAQREASSSFIVSEEREGRRVRVC 463
           NE QSPE ECQ+PCLVGRGN NESKKGFVPYKRCLAQR+ SS+ IVSEERE RR RVC
Sbjct: 753 NETQSPEVECQEPCLVGRGNANESKKGFVPYKRCLAQRDTSSALIVSEERESRRARVC 809

[Close]
BLAST of CmoCh01G008110 vs. TrEMBL
Match: A0A061FVK6_THECC (Homeodomain-like superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_013400 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 4.5e-100
Identity = 228/486 (46.91%), Postives = 305/486 (62.76%), Query Frame = 1 

Query: 1   MAVQEKNDGTLSNSSIGANNCLSSDGTQLDPLMRVSSLCSYGNESSLKVRKPYTISKQRE 60
           MA Q++ +GT S +++ +  C S+   Q + L +   L ++ ++ + KVRKPYTI+KQRE
Sbjct: 1   MATQDQVEGTTSPNALKSGICCSNSSPQCETLTQFQELYTFKHDHTPKVRKPYTITKQRE 60

Query: 61  KWTEEEHQRFLEALKLYGRGWRQIKEHVGTKTAVQIRSHAQKFFSKVVREPSGSNDSSIN 120
           KWTEEEHQ+FLEAL+LYGRGWRQI+EHVGTKTAVQIRSHAQKFFSKVVRE +G  + SIN
Sbjct: 61  KWTEEEHQKFLEALRLYGRGWRQIEEHVGTKTAVQIRSHAQKFFSKVVRESNGGFEGSIN 120

Query: 121 PIEIPPPRPKRKPLHPYPRKAVDSLKAISVAREPERSPSPNLSIAEKETQSPTSVLTAFS 180
           PIEIPPPRPKRKP+HPYPRK+VDSLK IS + EPERSPSP+  + E++ +SPTSVL+A +
Sbjct: 121 PIEIPPPRPKRKPVHPYPRKSVDSLKGISPSSEPERSPSPSQFVREQDNKSPTSVLSALT 180

Query: 181 SDDQISTVSEQHNRCSSPISQAVDIQSTRLPSVRKG-EMLLLESSSERFP---------- 240
           SD   S  SEQ N CSSP S   ++QS     V K  +     SS+E             
Sbjct: 181 SDAMGSAASEQQNGCSSPTSCTTNMQSINTSPVEKDIDYATSNSSAEEEKASLSSVKVFG 240

Query: 241 ----EDFLTLKSKP---GSASKKLDNKLHSPVKSIKLFGRTVMVDDDKKPSLHDFEVTKS 300
               ED L +K      GS   K D K+  P  SIKLFG+TV V D +KPS+ D E  KS
Sbjct: 241 HSAVEDVLPMKLNADFKGSVGAKGDAKMVVPFTSIKLFGKTVQVKDSRKPSM-DAENFKS 300

Query: 301 LVLDGESKNDCGVYAEKPVQMLPSKHMDVDLSLRIDNNGDWNMSPGGAPTNNTALNQENS 360
                 ++ D     +  VQ LPS H+D  LSL   N  DW++ P  A  +       + 
Sbjct: 301 PT-SKTAQGDIDAEGDMLVQALPSTHLDTRLSLGTVNE-DWSVVPSQANLSPYMEIHPDK 360

Query: 361 VLYVEAIANAPQTCWSLYQSVPYFYLAP--PDQTNQVMEERMQNDNSV-ESSCVDSCSGS 420
           + +VE+ ++AP   W+ YQ +P++Y+      QT+  +EER++    + E S   S +GS
Sbjct: 361 LDHVESTSDAPLPWWTFYQGLPFYYITSFNQTQTDSCVEERVKQKEILNERSSTGSNTGS 420

Query: 421 SSKDKNENQSP---EFECQDPCLVGRGNRNESKKGFVPYKRCLAQREASSSFIVSEEREG 463
            S+ +N  +S    + +CQ PC  G+    +  +GFVPYKRCLA+R+ SSS ++SEERE 
Sbjct: 421 VSQAENREKSSYSVDSQCQRPCPEGKTTLQKCSRGFVPYKRCLAERDMSSSVVMSEERER 480

[Close]
BLAST of CmoCh01G008110 vs. TrEMBL
Match: B9I4X5_POPTR (EARLY-PHYTOCHROME-RESPONSIVE1 family protein OS=Populus trichocarpa GN=POPTR_0012s03530g PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 1.8e-85
Identity = 216/491 (43.99%), Postives = 284/491 (57.84%), Query Frame = 1 

Query: 2   AVQEKNDGTLSNS-----SIGANNCLSSDGTQLDPLMRVSSLCSYGNESSLKVRKPYTIS 61
           A +E+ +GT  NS       G N+C  S+       +R+  L S+G+++  KVRKPYTI+
Sbjct: 4   ASKEQMEGTNLNSFGKACDFGTNSCEQSETD-----IRMQELYSFGSDNVPKVRKPYTIT 63

Query: 62  KQREKWTEEEHQRFLEALKLYGRGWRQIKEHVGTKTAVQIRSHAQKFFSKVVREPSGSND 121
           KQREKWT+EEHQRFLEALKLYGRGWR+I+EHVGTKTAVQIRSHAQK+FSKVVREP G N+
Sbjct: 64  KQREKWTDEEHQRFLEALKLYGRGWRRIQEHVGTKTAVQIRSHAQKYFSKVVREPGGINE 123

Query: 122 SSINPIEIPPPRPKRKPLHPYPRKAVDSLKAISVAREPERSPSPNLSIAEKETQSPTSVL 181
           SS+ PIEIPPPRPKRKP HPYPRK V+ L+    + + ERSPSPN S++EKE QSPTSVL
Sbjct: 124 SSLKPIEIPPPRPKRKPAHPYPRKPVNVLEVTGASSQLERSPSPNSSVSEKENQSPTSVL 183

Query: 182 TAFSSDDQISTVSEQHNRCSSPISQAVDIQSTRL-PSVRKGEMLLLESSSER-------- 241
           +A +SD   S +SE  N CSSP S   ++ S  L PS ++ E     SS E         
Sbjct: 184 SALASDTFGSALSEPCNACSSPTSCTTEMHSISLSPSAKETEHGTSNSSGEEKGNLSLVQ 243

Query: 242 ----FPEDFLTLKSKPGSASKKLDNKLHSPVK-----SIKLFGRTVMVDDDKKPSLHDFE 301
                 E+FL+   K    SK      H   K     SIKLFG TV + D +K S    E
Sbjct: 244 MSLSLLENFLSEVKKFELGSKNTVCAEHDAAKKASSASIKLFGMTVKIVDSQKESPPGAE 303

Query: 302 VTKSLVLDGESKNDCGVYAEKPVQMLPSKHMDVDLSLRIDNNGDWNMSPGGAPTNNTALN 361
           +    V+  E+ ++     EKP   L  K  D +LSL + N+   N+ P  A   +    
Sbjct: 304 IVLP-VISNENHDNVDADKEKPAHTLQRKQSDTELSLGMANSNQ-NLWPSPASVFHCTEM 363

Query: 362 QENSVLYVEAIANAPQTCWSLYQSVPYFYLAPPDQTN-----QVMEERMQNDNSV-ESSC 421
           Q ++  Y    ++ P   W+L Q VP+ YL   D T+       +EER +    + E SC
Sbjct: 364 QGDNANYFATNSSIP--WWTLCQGVPFLYLTSNDHTSAQKPIPCVEERFEEKEILNERSC 423

Query: 422 VDS--CSGSSSKDKNENQSPEFECQDPCLVGRGNRNESKKGFVPYKRCLAQREASSSFIV 462
             S   S    ++   N   + +C  P + G  +  +S +GFVPYKRCL +R+  S+ I+
Sbjct: 424 TSSNVFSVGDLENGERNLDVDSQCGQPSVEGTSSLQKSTRGFVPYKRCLGERDVKSTVII 483

[Close]
BLAST of CmoCh01G008110 vs. TrEMBL
Match: A0A061FWD0_THECC (Homeodomain-like superfamily protein, putative isoform 2 OS=Theobroma cacao GN=TCM_013400 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 5.8e-84
Identity = 207/486 (42.59%), Postives = 285/486 (58.64%), Query Frame = 1 

Query: 1   MAVQEKNDGTLSNSSIGANNCLSSDGTQLDPLMRVSSLCSYGNESSLKVRKPYTISKQRE 60
           MA Q++ +GT S +++ +  C S+   Q + L +   L ++ ++ + KVRKPYTI+KQRE
Sbjct: 1   MATQDQVEGTTSPNALKSGICCSNSSPQCETLTQFQELYTFKHDHTPKVRKPYTITKQRE 60

Query: 61  KWTEEEHQRFLEALKLYGRGWRQIKEHVGTKTAVQIRSHAQKFFSKVVREPSGSNDSSIN 120
           KWTEEEHQ+FLEAL+LYGRGWRQI+                    +VVRE +G  + SIN
Sbjct: 61  KWTEEEHQKFLEALRLYGRGWRQIEGF------------------QVVRESNGGFEGSIN 120

Query: 121 PIEIPPPRPKRKPLHPYPRKAVDSLKAISVAREPERSPSPNLSIAEKETQSPTSVLTAFS 180
           PIEIPPPRPKRKP+HPYPRK+VDSLK IS + EPERSPSP+  + E++ +SPTSVL+A +
Sbjct: 121 PIEIPPPRPKRKPVHPYPRKSVDSLKGISPSSEPERSPSPSQFVREQDNKSPTSVLSALT 180

Query: 181 SDDQISTVSEQHNRCSSPISQAVDIQSTRLPSVRKG-EMLLLESSSERFP---------- 240
           SD   S  SEQ N CSSP S   ++QS     V K  +     SS+E             
Sbjct: 181 SDAMGSAASEQQNGCSSPTSCTTNMQSINTSPVEKDIDYATSNSSAEEEKASLSSVKVFG 240

Query: 241 ----EDFLTLKSKP---GSASKKLDNKLHSPVKSIKLFGRTVMVDDDKKPSLHDFEVTKS 300
               ED L +K      GS   K D K+  P  SIKLFG+TV V D +KPS+ D E  KS
Sbjct: 241 HSAVEDVLPMKLNADFKGSVGAKGDAKMVVPFTSIKLFGKTVQVKDSRKPSM-DAENFKS 300

Query: 301 LVLDGESKNDCGVYAEKPVQMLPSKHMDVDLSLRIDNNGDWNMSPGGAPTNNTALNQENS 360
                 ++ D     +  VQ LPS H+D  LSL   N  DW++ P  A  +       + 
Sbjct: 301 PT-SKTAQGDIDAEGDMLVQALPSTHLDTRLSLGTVNE-DWSVVPSQANLSPYMEIHPDK 360

Query: 361 VLYVEAIANAPQTCWSLYQSVPYFYLAP--PDQTNQVMEERMQNDNSV-ESSCVDSCSGS 420
           + +VE+ ++AP   W+ YQ +P++Y+      QT+  +EER++    + E S   S +GS
Sbjct: 361 LDHVESTSDAPLPWWTFYQGLPFYYITSFNQTQTDSCVEERVKQKEILNERSSTGSNTGS 420

Query: 421 SSKDKNENQSP---EFECQDPCLVGRGNRNESKKGFVPYKRCLAQREASSSFIVSEEREG 463
            S+ +N  +S    + +CQ PC  G+    +  +GFVPYKRCLA+R+ SSS ++SEERE 
Sbjct: 421 VSQAENREKSSYSVDSQCQRPCPEGKTTLQKCSRGFVPYKRCLAERDMSSSVVMSEERER 465

[Close]
BLAST of CmoCh01G008110 vs. TrEMBL
Match: V4TXF8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020130mg PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.0e-83
Identity = 205/448 (45.76%), Postives = 266/448 (59.38%), Query Frame = 1 

Query: 36  SSLCSYGNESSLKVRKPYTISKQREKWTEEEHQRFLEALKLYGRGWRQIKEHVGTKTAVQ 95
           +SL S+ N+S  KVRKPYTI+KQREKWTEEEHQRFL+ALK+YGRGWRQI+EHVGTKTAVQ
Sbjct: 3   NSLYSFENDSLPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIEEHVGTKTAVQ 62

Query: 96  IRSHAQKFFSKVVREPSGSNDSSINPIEIPPPRPKRKPLHPYPRKAVDSLKAISVAREPE 155
           IRSHAQKFFSKVVRE +GS++SSI PIEIPPPRPKRKP+HPYPRK+VDSLKA SV+ + E
Sbjct: 63  IRSHAQKFFSKVVRESNGSSESSIMPIEIPPPRPKRKPVHPYPRKSVDSLKATSVSNQQE 122

Query: 156 RSPSPNLSIAEKETQSPTSVLTAFSSDDQISTVSEQHNRCSSPISQAVDIQSTRLPSVRK 215
              S N  +++K+ QSPTSVL++F+SD      S+Q N CSSP S   ++ S  L  + K
Sbjct: 123 NFTSSNALVSDKDRQSPTSVLSSFNSDTLGCAASDQQNGCSSPTSCTTEMHSVNLLPIEK 182

Query: 216 GEMLLLESSSERFPEDFLTLKSKPGSASK--------------KLDNKLHSPVKSIKLFG 275
            E   + S S    E   TL +   ++S               K D        SIKLFG
Sbjct: 183 -ENEYVTSISFPKEEKISTLPAHLSASSNVEELASVSKDSVYPKGDAAAAPSCTSIKLFG 242

Query: 276 RTVMVDDDKKPSLHDFEVTKSLVLDGESKNDCGVYAEKPVQMLPSKHMDVDLSLRIDNNG 335
           RTV+V D  KP     +  KS  +   S+ +  V  E  VQ  PSKH+D  L L + ++ 
Sbjct: 243 RTVLVSDSWKPYSLGADSYKS-PISKSSQENLDVDKENFVQSAPSKHLDTHLLLGMVSS- 302

Query: 336 DWNMSPGGAPTNNTALNQENSVLYVEAIANAPQTCWSLYQSVPYFYLAPPDQTN------ 395
           + N S    P       Q+      EA  N      SLY+  PYF+L P  +        
Sbjct: 303 NCNPSSHIGPVFQNMELQKKRTNVAEASHNIYLLWDSLYRGAPYFHLMPIGENQAATPLE 362

Query: 396 -QVMEERMQNDNSVESSCVDSCSGSSSKDKNENQSPEFECQDPCLVGRGNRNESKKGFVP 455
             V ++ + N+ S   S   S S   + +K+ + + + +C   C + + + +   +GFVP
Sbjct: 363 FSVKDKEILNERSCSGSSAGSVSELENWEKSSDVAVDSQCPQVCPLSQASPSNCMRGFVP 422

Query: 456 YKRCLAQREASSSFIVSEEREGRRVRVC 463
           YKRCLA+ E  SS IVSEERE +R RVC
Sbjct: 423 YKRCLAESEIRSSVIVSEERERQRARVC 447

[Close]
BLAST of CmoCh01G008110 vs. TAIR10
Match: AT1G18330.2 (AT1G18330.2 Homeodomain-like superfamily protein)

HSP 1 Score: 206.5 bits (524), Expect = 3.7e-53
Identity = 132/284 (46.48%), Postives = 177/284 (62.32%), Query Frame = 1 

Query: 1   MAVQEKNDGTLSNSSIGANNCLSSDGTQLDPLMRVSSLCSYGNESSLKVRKPYTISKQRE 60
           MA +++++   SN   G+  C S++G  ++P        S+  E+ +KVRKPYT++KQRE
Sbjct: 27  MAAEDRSEELSSNVENGS--CNSNEG--INP-----ETSSHWIENVVKVRKPYTVTKQRE 86

Query: 61  KWTEEEHQRFLEALKLYGRGWRQIKEHVGTKTAVQIRSHAQKFFSKVVREPSGSNDSSIN 120
           KW+EEEH RFLEA+KLYGRGWRQI+EH+GTKTAVQIRSHAQKFFSK+ +E    ++ S+ 
Sbjct: 87  KWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKFFSKMAQEADSRSEGSVK 146

Query: 121 PIEIPPPRPKRKPLHPYPRKAVDSLKAISVAREPERSPSPNLSIAEKETQSPTSVLTAFS 180
            I IPPPRPKRKP HPYPRK+              +SP PNLS  EK T+SPTSVL++F 
Sbjct: 147 AIVIPPPRPKRKPAHPYPRKSPVPY---------TQSPPPNLSAMEKGTKSPTSVLSSFG 206

Query: 181 SDDQISTVSEQHNRCSSPISQAVDIQSTRLPSVRKGEMLLLESSSERFPEDFLTLKSKPG 240
           S+DQ+       NRCSSP S   DIQS    S+ K       +S + F +D     S  G
Sbjct: 207 SEDQV-------NRCSSPNSCTSDIQSIGATSIDKKNN--YTTSKQPFKDD-----SDIG 266

Query: 241 SASKKLDNKLHSPVKSIKLFGRTVMV-DDDKKPSLHDFEVTKSL 284
           S          +P+ SI LFG+ V+V ++  KPS ++ +  K +
Sbjct: 267 S----------TPISSITLFGKIVLVAEESHKPSSYNDDDLKQM 268

[Close]
BLAST of CmoCh01G008110 vs. TAIR10
Match: AT5G17300.1 (AT5G17300.1 Homeodomain-like superfamily protein)

HSP 1 Score: 194.1 bits (492), Expect = 1.9e-49
Identity = 123/269 (45.72%), Postives = 161/269 (59.85%), Query Frame = 1 

Query: 42  GNESSLKVRKPYTISKQREKWTEEEHQRFLEALKLYGRGWRQIKEHVGTKTAVQIRSHAQ 101
           GN+ + KVRKPYTI+K+RE+WT+EEH++F+EALKLYGR WR+I+EHVG+KTAVQIRSHAQ
Sbjct: 38  GNDYAPKVRKPYTITKERERWTDEEHKKFVEALKLYGRAWRRIEEHVGSKTAVQIRSHAQ 97

Query: 102 KFFSKVVREPSGSNDSSINPIEIPPPRPKRKPLHPYPRKAVDSLKAISVAREPERSPSPN 161
           KFFSKV RE +G + SS+ PI IPPPRPKRKP HPYPRK  +       A +  RS SP+
Sbjct: 98  KFFSKVAREATGGDGSSVEPIVIPPPRPKRKPAHPYPRKFGNE------ADQTSRSVSPS 157

Query: 162 LSIAEKETQSPTSVLTAFSSDDQISTVSEQHNRCSSPISQAVDIQSTRLPSVRKGEMLLL 221
               E++TQSPTSVL+   S+   S  S   NR  SP+S A    +              
Sbjct: 158 ----ERDTQSPTSVLSTVGSEALCSLDSSSPNRSLSPVSSASPPAAL------------- 217

Query: 222 ESSSERFPEDFLTLKSK--PGSASKKLDNKLHSPVK-SIKLFGRTVMVDDDKKPSLHDFE 281
            +++   PE+  TLK +  P       ++ +  P K S+KLFG+TV+V D    S     
Sbjct: 218 -TTTANAPEELETLKLELFPSERLLNRESSIKEPTKQSLKLFGKTVLVSDSGMSS----S 266

Query: 282 VTKSLVLDGESKNDCGVYAEKPVQMLPSK 308
           +T S             Y + P+Q LP K
Sbjct: 278 LTTS------------TYCKSPIQPLPRK 266

[Close]
BLAST of CmoCh01G008110 vs. TAIR10
Match: AT3G10113.1 (AT3G10113.1 Homeodomain-like superfamily protein)

HSP 1 Score: 184.1 bits (466), Expect = 1.9e-46
Identity = 109/226 (48.23%), Postives = 147/226 (65.04%), Query Frame = 1 

Query: 3   VQEKNDGTLSNSSIGANNCLSSDGTQLDPLMRVSSLCSYGNESSLKVRKPYTISKQREKW 62
           +Q++++   SN   G+  C S++G  ++P        S+  E+ +KVRKPYT++KQREKW
Sbjct: 18  LQDRSEELSSNVENGS--CNSNEG--INP-----ETSSHWIENVVKVRKPYTVTKQREKW 77

Query: 63  TEEEHQRFLEALKLYGRGWRQIKEHVGTKTAVQIRSHAQKFFSKVVREPSGSNDSSINPI 122
           +EEEH RFLEA+KLYGRGWRQI+EH+GTKTAVQIRSHAQKFFSK+ +E    ++ S+  I
Sbjct: 78  SEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKFFSKMAQEADSRSEGSVKAI 137

Query: 123 EIPPPRPKRKPLHPYPRKAVDSLKAISVAREPERSPSPNLSIAEKETQSPTSVLTAFSSD 182
            IPPPRPKRKP HPYPRK+              +SP PNLS  EK T+SPTSVL++F S+
Sbjct: 138 VIPPPRPKRKPAHPYPRKSPVPY---------TQSPPPNLSAMEKGTKSPTSVLSSFGSE 197

Query: 183 DQISTVSEQHNRCSSPISQAVDIQSTRLPSVRK-GEMLLLESSSER 228
           DQ       +     P     DI ST + S+   G+++L+   S +
Sbjct: 198 DQ-----NNYTTSKQPFKDDSDIGSTPISSITLFGKIVLVAEESHK 220

[Close]
BLAST of CmoCh01G008110 vs. TAIR10
Match: AT5G37260.1 (AT5G37260.1 Homeodomain-like superfamily protein)

HSP 1 Score: 157.9 bits (398), Expect = 1.5e-38
Identity = 118/266 (44.36%), Postives = 155/266 (58.27%), Query Frame = 1 

Query: 34  RVSSLCSYGNESS-----LKVRKPYTISKQREKWTEEEHQRFLEALKLYGRGWRQIKEHV 93
           R  SLCS    SS     LK RKPYTI+KQREKWTE EH++F+EALKLYGR WR+I+EHV
Sbjct: 6   RCESLCSDELISSSDAFYLKTRKPYTITKQREKWTEAEHEKFVEALKLYGRAWRRIEEHV 65

Query: 94  GTKTAVQIRSHAQKFFSKVVREPSGSNDSSINPIEIPPPRPKRKPLHPYPRKAVDSLKAI 153
           GTKTAVQIRSHAQKFF+KV R+   S++S    IEIPPPRPKRKP+HPYPRK V     I
Sbjct: 66  GTKTAVQIRSHAQKFFTKVARDFGVSSES----IEIPPPRPKRKPMHPYPRKLV-----I 125

Query: 154 SVAREPERSP-SPNLSIAEKETQSPTSVLTAFSSDDQISTVSEQHNRCSSPISQAVDIQS 213
             A+E   +  + +  I +++ +SPTSVL+A  SD   S  S   N  S+ +S   + +S
Sbjct: 126 PDAKEMVYAELTGSKLIQDEDNRSPTSVLSAHGSDGLGSIGSNSPNSSSAELSSHTE-ES 185

Query: 214 TRLPSVRKGEMLLLESSSERFPEDFLTLKSKPGSASKKLDNKLHSPVKSIKLFGRT---- 273
             L +  K  + L   +      D+ +  S   S   K   KL+S  +S++    T    
Sbjct: 186 LSLEAETKQSLKLFGKTF--VVGDYNSSMSCDDSEDGK--KKLYSETQSLQCSSSTSENA 245

Query: 274 ---VMVDDDKKPSLHDFEVTKSLVLD 287
              V+V + K+     F   KS V +
Sbjct: 246 ETEVVVSEFKRSERSAFSQLKSSVTE 257

[Close]
BLAST of CmoCh01G008110 vs. TAIR10
Match: AT2G46830.1 (AT2G46830.1 circadian clock associated 1)

HSP 1 Score: 135.6 bits (340), Expect = 7.9e-32
Identity = 69/103 (66.99%), Postives = 80/103 (77.67%), Query Frame = 1 

Query: 40  SYGNESSLKVRKPYTISKQREKWTEEEHQRFLEALKLYGRGWRQIKEHVGTKTAVQIRSH 99
           S G +  +K RKPYTI+KQRE+WTEEEH RF+EAL+LYGR W++I+EHV TKTAVQIRSH
Sbjct: 5   SSGEDLVIKTRKPYTITKQRERWTEEEHNRFIEALRLYGRAWQKIEEHVATKTAVQIRSH 64

Query: 100 AQKFFSKVVR--EPSGSNDSSINPIEIPPPRPKRKPLHPYPRK 141
           AQKFFSKV +  E  G        I IPPPRPKRKP +PYPRK
Sbjct: 65  AQKFFSKVEKEAEAKGVAMGQALDIAIPPPRPKRKPNNPYPRK 107

[Close]
BLAST of CmoCh01G008110 vs. NCBI nr
Match: gi|659066338|ref|XP_008439595.1| (PREDICTED: protein REVEILLE 2-like [Cucumis melo])

HSP 1 Score: 725.7 bits (1872), Expect = 5.1e-206
Identity = 382/482 (79.25%), Postives = 411/482 (85.27%), Query Frame = 1 

Query: 1   MAVQEKNDGTLSNSSIGANNCLSSDGTQLDPLMRVSSLCSYGNESSLKVRKPYTISKQRE 60
           M VQEKN+GTLSN SI ANNCLS+DG QLDPLMRVSSL SYGNE++LKVRKPYTISKQRE
Sbjct: 1   MGVQEKNEGTLSNGSIAANNCLSNDGAQLDPLMRVSSLSSYGNENALKVRKPYTISKQRE 60

Query: 61  KWTEEEHQRFLEALKLYGRGWRQIKEHVGTKTAVQIRSHAQKFFSKVVREPSGSNDSSIN 120
           KWTEEEHQRFLEALKLYGRGWRQIKEHVGTKTAVQIRSHAQKFFSKVVRE SGSN+SSIN
Sbjct: 61  KWTEEEHQRFLEALKLYGRGWRQIKEHVGTKTAVQIRSHAQKFFSKVVRESSGSNESSIN 120

Query: 121 PIEIPPPRPKRKPLHPYPRKAVDSLKAISVAREPERSPSPNLSIAEKETQSPTSVLTAFS 180
           PIEIPPPRPKRKPLHPYPRKAVDSLKAISVARE ERSPSPNLS+AEKET SPTSVLTAFS
Sbjct: 121 PIEIPPPRPKRKPLHPYPRKAVDSLKAISVARESERSPSPNLSLAEKETHSPTSVLTAFS 180

Query: 181 SDDQISTVSEQHNRCSSPISQAVDIQSTRLPSVRKGE--------------MLLLESSSE 240
           SDDQIS VSEQHNRC SPISQAVD+Q TRL  VRKGE              ML LES+S 
Sbjct: 181 SDDQISAVSEQHNRCPSPISQAVDMQPTRLSPVRKGELYLPSKSNVGEEKGMLSLESTSG 240

Query: 241 RFPEDFLTLKSKPGSASKKLDNKLHSPVKSIKLFGRTVMVDDDKKPSLHDFEVTKSLVLD 300
           +FPEDFLTLK KPGSASKK+DNKLHSPVKSIKLFGRTVMV +DK+PSL DFEVT++L  +
Sbjct: 241 QFPEDFLTLKFKPGSASKKVDNKLHSPVKSIKLFGRTVMVTNDKQPSLLDFEVTETLTFE 300

Query: 301 GESKNDCGVYAEKPVQMLPSKHMDVDLSLRIDNNGDWNMSPGGAPTNNTALNQENSVLYV 360
           G+SK +C V AE  V+MLPSKHMDV L+L +DNNGD NM PGGAPT  T  NQ+ SV YV
Sbjct: 301 GDSKRECKVSAENSVEMLPSKHMDVSLALGMDNNGDLNMPPGGAPT-LTLGNQDKSVPYV 360

Query: 361 EAIANAPQTCWSLYQSVPYFYLAPPDQ------TNQVMEERMQNDNSVESSCVDSCSGSS 420
           +A  NAPQTCWSLYQ+VPYFYLAP DQ      T+ +MEER+QNDNS ESS  DSCSGS 
Sbjct: 361 KAFPNAPQTCWSLYQNVPYFYLAPSDQTSTGTSTDHIMEERIQNDNSQESSFADSCSGSP 420

Query: 421 SKDKNENQSPEFECQDPCLVGRGNRNESKKGFVPYKRCLAQREASSSFIVSEEREGRRVR 463
            KDKNE QSPE ECQ+PCLVGRGN NESKKGFVPYKRCLAQR+ SS+ IVSEERE RR R
Sbjct: 421 RKDKNETQSPEVECQEPCLVGRGNANESKKGFVPYKRCLAQRDTSSALIVSEERESRRAR 480

[Close]
BLAST of CmoCh01G008110 vs. NCBI nr
Match: gi|778656780|ref|XP_011649662.1| (PREDICTED: protein REVEILLE 7-like [Cucumis sativus])

HSP 1 Score: 713.4 bits (1840), Expect = 2.6e-202
Identity = 378/480 (78.75%), Postives = 408/480 (85.00%), Query Frame = 1 

Query: 1   MAVQEKNDGTLSNSSIGANNCLSSDGTQLDPLMRVSSLCSYGNESSLKVRKPYTISKQRE 60
           M VQEKN+GTLSN SI ANN LS+DG QLDPLMRVSSL SYGNES+LKVRKPYTISKQRE
Sbjct: 1   MGVQEKNEGTLSNGSIAANNGLSNDGAQLDPLMRVSSLSSYGNESALKVRKPYTISKQRE 60

Query: 61  KWTEEEHQRFLEALKLYGRGWRQIKEHVGTKTAVQIRSHAQKFFSKVVREPSGSNDSSIN 120
           KWTEEEHQRFLEALKLYGRGWRQIKEHVGTKTAVQIRSHAQKFFSKVVRE SGSN+SSIN
Sbjct: 61  KWTEEEHQRFLEALKLYGRGWRQIKEHVGTKTAVQIRSHAQKFFSKVVRESSGSNESSIN 120

Query: 121 PIEIPPPRPKRKPLHPYPRKAVDSLKAISVAREPERSPSPNLSIAEKETQSPTSVLTAFS 180
           PIEIPPPRPKRKPLHPYPRKAVDSLKAISVARE ERSPSPNLS+AEKET SPTSVLTAFS
Sbjct: 121 PIEIPPPRPKRKPLHPYPRKAVDSLKAISVARESERSPSPNLSLAEKETHSPTSVLTAFS 180

Query: 181 SDDQISTVSEQHNRCSSPISQAVDIQSTRLPSVRKGE------------MLLLESSSERF 240
           SDDQIS VSEQHNRC SPISQAVD+Q TR   VRKGE            ML LESSSERF
Sbjct: 181 SDDQISAVSEQHNRCPSPISQAVDMQPTRSSPVRKGELYLQSIVGEEKGMLSLESSSERF 240

Query: 241 PEDFLTLKSKPGSASKKLDNKLHSPVKSIKLFGRTVMVDDDKKPSLHDFEVTKSLVLDGE 300
           PE+FLTLK KPGSASKK+DNKLHSPVKSIKLFGRTVMV +DK+PS  DFEVT++L  + +
Sbjct: 241 PEEFLTLKFKPGSASKKVDNKLHSPVKSIKLFGRTVMVTNDKQPSPLDFEVTETLTFEDD 300

Query: 301 SKNDCGVYAEKPVQMLPSKHMDVDLSLRIDNNGDWNMSPGGAPTNNTALNQENSVLYVEA 360
           SK++C VYAE  V+ML SKHMDV L+L +DNNGD NMSPGGAP + T   Q  SV YV+A
Sbjct: 301 SKSECKVYAENSVEMLTSKHMDVSLALGMDNNGDLNMSPGGAP-SLTLGKQNRSVPYVKA 360

Query: 361 IANAPQTCWSLYQSVPYFYLAPPDQ------TNQVMEERMQNDNSVESSCVDSCSGSSSK 420
           + NA QTCWSLYQ+VPYFYLAP DQ      T+ +MEER+QNDNS ESS  DSCSGS  K
Sbjct: 361 LPNASQTCWSLYQTVPYFYLAPSDQTSTGTSTDHIMEERIQNDNSQESSFADSCSGSPRK 420

Query: 421 DKNENQSPEFECQDPCLVGRGNRNESKKGFVPYKRCLAQREASSSFIVSEEREGRRVRVC 463
           D+NE QSPE ECQ+PCLVGRGN NESKKGFVPYKRCLAQR+ SS+ IVSEERE RR RVC
Sbjct: 421 DQNETQSPEVECQEPCLVGRGNANESKKGFVPYKRCLAQRDTSSALIVSEERESRRARVC 479

[Close]
BLAST of CmoCh01G008110 vs. NCBI nr
Match: gi|700208878|gb|KGN63974.1| (hypothetical protein Csa_1G032440 [Cucumis sativus])

HSP 1 Score: 709.1 bits (1829), Expect = 4.9e-201
Identity = 376/478 (78.66%), Postives = 406/478 (84.94%), Query Frame = 1 

Query: 3   VQEKNDGTLSNSSIGANNCLSSDGTQLDPLMRVSSLCSYGNESSLKVRKPYTISKQREKW 62
           V EKN+GTLSN SI ANN LS+DG QLDPLMRVSSL SYGNES+LKVRKPYTISKQREKW
Sbjct: 333 VAEKNEGTLSNGSIAANNGLSNDGAQLDPLMRVSSLSSYGNESALKVRKPYTISKQREKW 392

Query: 63  TEEEHQRFLEALKLYGRGWRQIKEHVGTKTAVQIRSHAQKFFSKVVREPSGSNDSSINPI 122
           TEEEHQRFLEALKLYGRGWRQIKEHVGTKTAVQIRSHAQKFFSKVVRE SGSN+SSINPI
Sbjct: 393 TEEEHQRFLEALKLYGRGWRQIKEHVGTKTAVQIRSHAQKFFSKVVRESSGSNESSINPI 452

Query: 123 EIPPPRPKRKPLHPYPRKAVDSLKAISVAREPERSPSPNLSIAEKETQSPTSVLTAFSSD 182
           EIPPPRPKRKPLHPYPRKAVDSLKAISVARE ERSPSPNLS+AEKET SPTSVLTAFSSD
Sbjct: 453 EIPPPRPKRKPLHPYPRKAVDSLKAISVARESERSPSPNLSLAEKETHSPTSVLTAFSSD 512

Query: 183 DQISTVSEQHNRCSSPISQAVDIQSTRLPSVRKGE------------MLLLESSSERFPE 242
           DQIS VSEQHNRC SPISQAVD+Q TR   VRKGE            ML LESSSERFPE
Sbjct: 513 DQISAVSEQHNRCPSPISQAVDMQPTRSSPVRKGELYLQSIVGEEKGMLSLESSSERFPE 572

Query: 243 DFLTLKSKPGSASKKLDNKLHSPVKSIKLFGRTVMVDDDKKPSLHDFEVTKSLVLDGESK 302
           +FLTLK KPGSASKK+DNKLHSPVKSIKLFGRTVMV +DK+PS  DFEVT++L  + +SK
Sbjct: 573 EFLTLKFKPGSASKKVDNKLHSPVKSIKLFGRTVMVTNDKQPSPLDFEVTETLTFEDDSK 632

Query: 303 NDCGVYAEKPVQMLPSKHMDVDLSLRIDNNGDWNMSPGGAPTNNTALNQENSVLYVEAIA 362
           ++C VYAE  V+ML SKHMDV L+L +DNNGD NMSPGGAP+  T   Q  SV YV+A+ 
Sbjct: 633 SECKVYAENSVEMLTSKHMDVSLALGMDNNGDLNMSPGGAPSL-TLGKQNRSVPYVKALP 692

Query: 363 NAPQTCWSLYQSVPYFYLAPPDQ------TNQVMEERMQNDNSVESSCVDSCSGSSSKDK 422
           NA QTCWSLYQ+VPYFYLAP DQ      T+ +MEER+QNDNS ESS  DSCSGS  KD+
Sbjct: 693 NASQTCWSLYQTVPYFYLAPSDQTSTGTSTDHIMEERIQNDNSQESSFADSCSGSPRKDQ 752

Query: 423 NENQSPEFECQDPCLVGRGNRNESKKGFVPYKRCLAQREASSSFIVSEEREGRRVRVC 463
           NE QSPE ECQ+PCLVGRGN NESKKGFVPYKRCLAQR+ SS+ IVSEERE RR RVC
Sbjct: 753 NETQSPEVECQEPCLVGRGNANESKKGFVPYKRCLAQRDTSSALIVSEERESRRARVC 809

[Close]
BLAST of CmoCh01G008110 vs. NCBI nr
Match: gi|590666823|ref|XP_007037069.1| (Homeodomain-like superfamily protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 373.2 bits (957), Expect = 6.4e-100
Identity = 228/486 (46.91%), Postives = 305/486 (62.76%), Query Frame = 1 

Query: 1   MAVQEKNDGTLSNSSIGANNCLSSDGTQLDPLMRVSSLCSYGNESSLKVRKPYTISKQRE 60
           MA Q++ +GT S +++ +  C S+   Q + L +   L ++ ++ + KVRKPYTI+KQRE
Sbjct: 1   MATQDQVEGTTSPNALKSGICCSNSSPQCETLTQFQELYTFKHDHTPKVRKPYTITKQRE 60

Query: 61  KWTEEEHQRFLEALKLYGRGWRQIKEHVGTKTAVQIRSHAQKFFSKVVREPSGSNDSSIN 120
           KWTEEEHQ+FLEAL+LYGRGWRQI+EHVGTKTAVQIRSHAQKFFSKVVRE +G  + SIN
Sbjct: 61  KWTEEEHQKFLEALRLYGRGWRQIEEHVGTKTAVQIRSHAQKFFSKVVRESNGGFEGSIN 120

Query: 121 PIEIPPPRPKRKPLHPYPRKAVDSLKAISVAREPERSPSPNLSIAEKETQSPTSVLTAFS 180
           PIEIPPPRPKRKP+HPYPRK+VDSLK IS + EPERSPSP+  + E++ +SPTSVL+A +
Sbjct: 121 PIEIPPPRPKRKPVHPYPRKSVDSLKGISPSSEPERSPSPSQFVREQDNKSPTSVLSALT 180

Query: 181 SDDQISTVSEQHNRCSSPISQAVDIQSTRLPSVRKG-EMLLLESSSERFP---------- 240
           SD   S  SEQ N CSSP S   ++QS     V K  +     SS+E             
Sbjct: 181 SDAMGSAASEQQNGCSSPTSCTTNMQSINTSPVEKDIDYATSNSSAEEEKASLSSVKVFG 240

Query: 241 ----EDFLTLKSKP---GSASKKLDNKLHSPVKSIKLFGRTVMVDDDKKPSLHDFEVTKS 300
               ED L +K      GS   K D K+  P  SIKLFG+TV V D +KPS+ D E  KS
Sbjct: 241 HSAVEDVLPMKLNADFKGSVGAKGDAKMVVPFTSIKLFGKTVQVKDSRKPSM-DAENFKS 300

Query: 301 LVLDGESKNDCGVYAEKPVQMLPSKHMDVDLSLRIDNNGDWNMSPGGAPTNNTALNQENS 360
                 ++ D     +  VQ LPS H+D  LSL   N  DW++ P  A  +       + 
Sbjct: 301 PT-SKTAQGDIDAEGDMLVQALPSTHLDTRLSLGTVNE-DWSVVPSQANLSPYMEIHPDK 360

Query: 361 VLYVEAIANAPQTCWSLYQSVPYFYLAP--PDQTNQVMEERMQNDNSV-ESSCVDSCSGS 420
           + +VE+ ++AP   W+ YQ +P++Y+      QT+  +EER++    + E S   S +GS
Sbjct: 361 LDHVESTSDAPLPWWTFYQGLPFYYITSFNQTQTDSCVEERVKQKEILNERSSTGSNTGS 420

Query: 421 SSKDKNENQSP---EFECQDPCLVGRGNRNESKKGFVPYKRCLAQREASSSFIVSEEREG 463
            S+ +N  +S    + +CQ PC  G+    +  +GFVPYKRCLA+R+ SSS ++SEERE 
Sbjct: 421 VSQAENREKSSYSVDSQCQRPCPEGKTTLQKCSRGFVPYKRCLAERDMSSSVVMSEERER 480

[Close]
BLAST of CmoCh01G008110 vs. NCBI nr
Match: gi|743908658|ref|XP_011047787.1| (PREDICTED: protein REVEILLE 7-like [Populus euphratica])

HSP 1 Score: 326.6 bits (836), Expect = 6.9e-86
Identity = 212/489 (43.35%), Postives = 285/489 (58.28%), Query Frame = 1 

Query: 2   AVQEKNDGTLSNSSIGANNCLSSDGTQLDPLMRVSSLCSYGNESSLKVRKPYTISKQREK 61
           A +E+ + T  NS   A++C ++   Q + +++++ L S+G+++  KVRKPYTI+KQREK
Sbjct: 4   AAKERIEVTKQNSFGEASDCCTNGSEQSEMVLQLNELHSFGSDNIPKVRKPYTITKQREK 63

Query: 62  WTEEEHQRFLEALKLYGRGWRQIKEHVGTKTAVQIRSHAQKFFSKVVREPSGSNDSSINP 121
           WTEEEHQRFLEALKLYGRGWR+I+EHVGTKTAVQIRSHAQK FSKVV E SG N+SS+ P
Sbjct: 64  WTEEEHQRFLEALKLYGRGWRKIQEHVGTKTAVQIRSHAQKIFSKVVWESSGGNESSLKP 123

Query: 122 IEIPPPRPKRKPLHPYPRKAVDSLKAISVAREPERSPSPNLSIAEKETQSPTSVLTAFSS 181
           IEIPPPRPKRKP HPYPRK+VD  K    + + + SPSPN S +EK+  SPTSVL+A +S
Sbjct: 124 IEIPPPRPKRKPAHPYPRKSVDIHKGTPASSQLDGSPSPNSSASEKDNLSPTSVLSAVAS 183

Query: 182 DDQISTVSEQHNRCSSPISQAVDIQSTRLPSVRKGEMLLLESSSERFPEDFLTLKSKPGS 241
           D   + +SEQHN CSSP S   D+Q    PS ++ E L  +SS E   E F  ++     
Sbjct: 184 DTLGTALSEQHNACSSPTSCTTDMQ----PSAKEAEHLTSKSSREEDKETFSLIQMSCSP 243

Query: 242 ASKKLDNKL----------------HSPVKSIKLFGRTVMVDDDKKPSLHDFEVTKSLVL 301
             K L  K                  +   SIKLFG TVMV   +K S    E+  S+  
Sbjct: 244 LEKFLSKKFELGSDDTVSAEGDATKEASSTSIKLFGMTVMVAASQKKSPPGAELVLSMT- 303

Query: 302 DGESKNDCGVYAEKPVQMLPSKHMDVDLSLRIDNNGDWNMSPGGAPTNNTALNQENSVLY 361
             E++++     EKP Q L  K  D +LSL ++N+ D N  P  A        Q  +  Y
Sbjct: 304 SNENQDNVDTDKEKPAQTLLLKQSDNELSLGMENS-DQNQLPSPASVFECTELQRGTANY 363

Query: 362 VEAIANAPQTCW------SLYQSVPYFYLAP--PDQTNQVMEERMQNDNSV-ESSCVDSC 421
                + P  CW      S+     Y + +P  P  T   M ER +    + E SC  S 
Sbjct: 364 FATNPSIP--CWFFGNGVSVLPPTSYDHTSPPTPTPTPSYMAERSEEKEILNERSCTGSN 423

Query: 422 SGSSSKDKNENQS---PEFECQDPCLVGRGNRNESKKGFVPYKRCLAQREASSSFIVSEE 463
           +GS  + +N  +S    + +C+ P + G+ +  +  +GFVPYKRCL +R+  S+ IV EE
Sbjct: 424 AGSVGELENVEKSLDVVDSQCRQPSVEGKPSLQKCTRGFVPYKRCLGERDVKSTVIVYEE 483

The following BLAST results are available for this feature:
BLAST of CmoCh01G008110 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RVE7_ARATH6.5e-5246.48Protein REVEILLE 7 OS=Arabidopsis thaliana GN=RVE7 PE=2 SV=1[more]
RVE1_ARATH3.3e-4845.72Protein REVEILLE 1 OS=Arabidopsis thaliana GN=RVE1 PE=2 SV=1[more]
RVE7L_ARATH3.4e-4548.23Protein REVEILLE 7-like OS=Arabidopsis thaliana GN=RVE7L PE=3 SV=1[more]
RVE2_ARATH2.6e-3744.36Protein REVEILLE 2 OS=Arabidopsis thaliana GN=RVE2 PE=2 SV=1[more]
CCA1_ARATH1.4e-3066.99Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 SV=1[more]
BLAST of CmoCh01G008110 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSL2_CUCSA3.4e-20178.66Uncharacterized protein OS=Cucumis sativus GN=Csa_1G032440 PE=4 SV=1[more]
A0A061FVK6_THECC4.5e-10046.91Homeodomain-like superfamily protein, putative isoform 1 OS=Theobroma cacao GN=T... [more]
B9I4X5_POPTR1.8e-8543.99EARLY-PHYTOCHROME-RESPONSIVE1 family protein OS=Populus trichocarpa GN=POPTR_001... [more]
A0A061FWD0_THECC5.8e-8442.59Homeodomain-like superfamily protein, putative isoform 2 OS=Theobroma cacao GN=T... [more]
V4TXF8_9ROSI1.0e-8345.76Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020130mg PE=4 SV=1[more]
BLAST of CmoCh01G008110 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G18330.23.7e-5346.48 Homeodomain-like superfamily protein[more]
AT5G17300.11.9e-4945.72 Homeodomain-like superfamily protein[more]
AT3G10113.11.9e-4648.23 Homeodomain-like superfamily protein[more]
AT5G37260.11.5e-3844.36 Homeodomain-like superfamily protein[more]
AT2G46830.17.9e-3266.99 circadian clock associated 1[more]
BLAST of CmoCh01G008110 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659066338|ref|XP_008439595.1|5.1e-20679.25PREDICTED: protein REVEILLE 2-like [Cucumis melo][more]
gi|778656780|ref|XP_011649662.1|2.6e-20278.75PREDICTED: protein REVEILLE 7-like [Cucumis sativus][more]
gi|700208878|gb|KGN63974.1|4.9e-20178.66hypothetical protein Csa_1G032440 [Cucumis sativus][more]
gi|590666823|ref|XP_007037069.1|6.4e-10046.91Homeodomain-like superfamily protein, putative isoform 1 [Theobroma cacao][more]
gi|743908658|ref|XP_011047787.1|6.9e-8643.35PREDICTED: protein REVEILLE 7-like [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR006447Myb_dom_plants
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0042967 acyl-carrier-protein biosynthetic process
biological_process GO:0016573 histone acetylation
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0000123 histone acetyltransferase complex
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0004402 histone acetyltransferase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003712 transcription cofactor activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G008110.1CmoCh01G008110.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 59..102
score: 7.6
IPR001005SANT/Myb domainSMARTSM00717santcoord: 58..106
score: 9.0
IPR006447Myb domain, plantsTIGRFAMsTIGR01557TIGR01557coord: 57..106
score: 3.5
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 59..99
score: 1.
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 53..107
score: 2.47
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 54..108
score: 21
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 40..225
score: 9.6
NoneNo IPR availablePANTHERPTHR12802:SF60PROTEIN REVEILLE 1-RELATEDcoord: 40..225
score: 9.6