CmoCh01G006620 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G006620
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Copper transporter, putative
Location	Cmo_Chr01 : 3381526 .. 3382005 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGCTACTGACGAGACTCACCACCACCATATGCAAGGTATGGCGCCGCCGCCGGCCTCTTCCGCCGCGTCGTCGGGGATGACGATGCATCACCGGATGATGCACATGACCTTCTTTTGGGGAACTAACGCTGAGATTCTGTTCCGTAACTGGCCTGGAGACCGATCCGGTATGTACGCCTTGGCCTTGATCTTCATATTCGTGCTTGCTTTCCTCGTCGAGTGGCTTTCGCATAGCCGATTGATTAGGGAAGATTCTAGCTCCGTAGCGGCTGGATTGATCCGGACTCTGATGCATACGGTTAGGGTTGGATTGGCGTATTTAGTGATGCTTGCGGTTATGTCGTTCAATGTTGGAGTGTTTTTGGTAGCAATCGGTGGTCATTGCCTCGGATTCTTCTTCTTTGGGAGTAGATTTTTCAAGAATTCAGGCGCGGCTTCTGGTAAATCCTCTGATCTTCCTCCTCTTAGTTGTTGA

mRNA sequence

ATGGACGCTACTGACGAGACTCACCACCACCATATGCAAGGTATGGCGCCGCCGCCGGCCTCTTCCGCCGCGTCGTCGGGGATGACGATGCATCACCGGATGATGCACATGACCTTCTTTTGGGGAACTAACGCTGAGATTCTGTTCCGTAACTGGCCTGGAGACCGATCCGGTATGTACGCCTTGGCCTTGATCTTCATATTCGTGCTTGCTTTCCTCGTCGAGTGGCTTTCGCATAGCCGATTGATTAGGGAAGATTCTAGCTCCGTAGCGGCTGGATTGATCCGGACTCTGATGCATACGGTTAGGGTTGGATTGGCGTATTTAGTGATGCTTGCGGTTATGTCGTTCAATGTTGGAGTGTTTTTGGTAGCAATCGGTGGTCATTGCCTCGGATTCTTCTTCTTTGGGAGTAGATTTTTCAAGAATTCAGGCGCGGCTTCTGGTAAATCCTCTGATCTTCCTCCTCTTAGTTGTTGA

Coding sequence (CDS)

ATGGACGCTACTGACGAGACTCACCACCACCATATGCAAGGTATGGCGCCGCCGCCGGCCTCTTCCGCCGCGTCGTCGGGGATGACGATGCATCACCGGATGATGCACATGACCTTCTTTTGGGGAACTAACGCTGAGATTCTGTTCCGTAACTGGCCTGGAGACCGATCCGGTATGTACGCCTTGGCCTTGATCTTCATATTCGTGCTTGCTTTCCTCGTCGAGTGGCTTTCGCATAGCCGATTGATTAGGGAAGATTCTAGCTCCGTAGCGGCTGGATTGATCCGGACTCTGATGCATACGGTTAGGGTTGGATTGGCGTATTTAGTGATGCTTGCGGTTATGTCGTTCAATGTTGGAGTGTTTTTGGTAGCAATCGGTGGTCATTGCCTCGGATTCTTCTTCTTTGGGAGTAGATTTTTCAAGAATTCAGGCGCGGCTTCTGGTAAATCCTCTGATCTTCCTCCTCTTAGTTGTTGA

Homology

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BLAST of CmoCh01G006620 vs. Swiss-Prot
Match: COPT1_ARATH (Copper transporter 1 OS=Arabidopsis thaliana GN=COPT1 PE=2 SV=2)

HSP 1 Score: 166.4 bits (420), Expect = 2.6e-40
Identity = 93/168 (55.36%), Postives = 117/168 (69.64%), Query Frame = 1


Query: 9   HHHMQGMAPPPASSAASSGMTM-----------HHRM---MHMTFFWGTNAEILFRNWPG 68
           H HM GM P P+SS++SS  +M           HH M   MHMTFFWG N E+LF  WPG
Sbjct: 3   HDHMHGM-PRPSSSSSSSPSSMMNNGSMNEGGGHHHMKMMMHMTFFWGKNTEVLFSGWPG 62

Query: 69  DRSGMYALALIFIFVLAFLVEWLSHSRLIR---EDSSSVAAGLIRTLMHTVRVGLAYLVM 128
             SGMYAL LIF+F LA L EWL+HS L+R    DS++ AAGLI+T ++T+R+GLAYLVM
Sbjct: 63  TSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVM 122

Query: 129 LAVMSFNVGVFLVAIGGHCLGFFFFGSRFFKNSGAASGKSSDLPPLSC 160
           LAVMSFN GVFLVA+ GH +GF  FGS+ F+N+ +   K++ +PP  C
Sbjct: 123 LAVMSFNAGVFLVALAGHAVGFMLFGSQTFRNT-SDDRKTNYVPPSGC 168

[Close]

BLAST of CmoCh01G006620 vs. Swiss-Prot
Match: COPT2_ARATH (Copper transporter 2 OS=Arabidopsis thaliana GN=COPT2 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 5.3e-38
Identity = 85/152 (55.92%), Postives = 106/152 (69.74%), Query Frame = 1


Query: 9   HHHMQGMAPP-PASSAASSGMTMHHRMMHMTFFWGTNAEILFRNWPGDRSGMYALALIFI 68
           H HM  M PP P+SS+ S+  T H  MMHMTFFWG N E+LF  WPG  SGMYAL LI I
Sbjct: 3   HDHMHDMPPPSPSSSSMSNHTTPHMMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVI 62

Query: 69  FVLAFLVEWLSHSRLIR-EDSSSVAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVFLVAI 128
           F+LA + EWL+HS ++R   S++ AAGL +T ++T++ GL+YLVMLAVMSFN GVF+VAI
Sbjct: 63  FLLAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAI 122

Query: 129 GGHCLGFFFFGSRFFKNSGAASGKSSDLPPLS 159
            G+ +GFF FGS  FK        +  LPP S
Sbjct: 123 AGYGVGFFLFGSTTFKKPSDDQKTAELLPPSS 154

[Close]

BLAST of CmoCh01G006620 vs. Swiss-Prot
Match: COPT6_ARATH (Copper transporter 6 OS=Arabidopsis thaliana GN=COPT6 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.3e-32
Identity = 73/131 (55.73%), Postives = 92/131 (70.23%), Query Frame = 1


Query: 14  GMAPPPASSAASSGMTMHHRMMHMTFFWGTNAEILFRNWPGDRSGMYALALIFIFVLAFL 73
           G  PP + S+  +    +  MMHMTFFWG N EILF  WPG   GMY L LI +F+LA +
Sbjct: 4   GNMPPSSPSSMVNHTNSNMIMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVI 63

Query: 74  VEWLSHSRLIR-EDSSSVAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVFLVAIGGHCLG 133
           VEWL+HS ++R   S+S A GL++T ++T++ GLAYLVMLAVMSFN GVF+VAI G  +G
Sbjct: 64  VEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAVG 123

Query: 134 FFFFGSRFFKN 144
           F  FGS  FKN
Sbjct: 124 FMLFGSTAFKN 134

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BLAST of CmoCh01G006620 vs. Swiss-Prot
Match: COPT1_ORYSJ (Copper transporter 1 OS=Oryza sativa subsp. japonica GN=COPT1 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 4.1e-30
Identity = 76/136 (55.88%), Postives = 89/136 (65.44%), Query Frame = 1


Query: 10  HHMQGMAPPPASSAASSGM--TMHHRMMHMTFFWGTNAEILFRNWPGDRSGMYALALIFI 69
           H M GM+PP A +AA  GM      R  HMTFFWG N+E+LF  WPG R GMYALALIF+
Sbjct: 6   HDMGGMSPPAAGAAAQGGMGAMKSMRYTHMTFFWGKNSEVLFTMWPGTRGGMYALALIFV 65

Query: 70  FVLAFLVEWLSHSR-------LIREDSSSVAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG 129
           F LA +VE+L   R       L R   +  A GL R  +HTVRVG+AYL+MLA+MSFN G
Sbjct: 66  FALAVIVEFLGSRRADACLAALARR--APAAGGLARAAVHTVRVGVAYLLMLALMSFNGG 125

Query: 130 VFLVAIGGHCLGFFFF 137
           VFLVA+ GH  GF  F
Sbjct: 126 VFLVAVAGHAAGFLAF 139

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BLAST of CmoCh01G006620 vs. Swiss-Prot
Match: COPT4_ARATH (Copper transporter 4 OS=Arabidopsis thaliana GN=COPT4 PE=2 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 8.0e-26
Identity = 61/113 (53.98%), Postives = 78/113 (69.03%), Query Frame = 1


Query: 34  MMHMTFFWGTNAEILFRNWPGDRSGMYALALIFIFVLAFLVEWL---SHSRLIREDSSSV 93
           ++H TF+WG N ++LF  WPG   GMYALALIF+F LAFL EWL   S +  I++ +  +
Sbjct: 29  LLHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQGADKL 88

Query: 94  AAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVFLVAIGGHCLGFFFFGSRFFKN 144
           A    RT M+TV+ G +YLV+LAV+SFN GVFL AI GH LGF  F  R F+N
Sbjct: 89  AKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRAFRN 141

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BLAST of CmoCh01G006620 vs. TrEMBL
Match: A0A0A0LVF3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G526830 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.2e-59
Identity = 120/148 (81.08%), Postives = 125/148 (84.46%), Query Frame = 1


Query: 1   MDATDETHHHHMQGMAPPPASSAASSGMTMHHRMMHMTFFWGTNAEILFRNWPGDRSGMY 60
           MDA  E H+HHM GM PPP SS AS  M  H  MMHMTFFWGTNAEILF  WPG+RSGMY
Sbjct: 1   MDAATEAHNHHMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMY 60

Query: 61  ALALIFIFVLAFLVEWLSHSRLIREDSSSVAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG 120
           ALALIFIFVLAFLVEWL+H RLI+EDSS  AAGLIRTLMHTVRVGLAYLVMLAVMSFNVG
Sbjct: 61  ALALIFIFVLAFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG 120

Query: 121 VFLVAIGGHCLGFFFFGSRFFKNSGAAS 149
           V LVAIGGHCLGFF FGS+FFK S A S
Sbjct: 121 VLLVAIGGHCLGFFLFGSKFFKRSEAVS 148

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BLAST of CmoCh01G006620 vs. TrEMBL
Match: A0A061GWU0_THECC (Copper transporter, putative OS=Theobroma cacao GN=TCM_041729 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.8e-46
Identity = 100/158 (63.29%), Postives = 120/158 (75.95%), Query Frame = 1


Query: 5   DETHHHHMQGMAPPPASSAASSGMTMHHRMM--HMTFFWGTNAEILFRNWPGDRSGMYAL 64
           +  +H HM GM     +  +++G TMHH MM  HMTFFWG NAEILF  WPG R+GMY L
Sbjct: 2   ENMNHDHMNGM-----NDESAAGGTMHHHMMMMHMTFFWGKNAEILFSGWPGTRTGMYVL 61

Query: 65  ALIFIFVLAFLVEWLSHSRLIREDSSSVAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVF 124
           ALI +FVL F+VEW+SHS+LI+  S+ VAAG+++TL+H +RVGLAYLVMLAVMSFN GVF
Sbjct: 62  ALIVVFVLGFMVEWISHSQLIKPGSTHVAAGVVQTLLHALRVGLAYLVMLAVMSFNGGVF 121

Query: 125 LVAIGGHCLGFFFFGSRFFKNSGA-ASGKSSDLPPLSC 160
           L A+ GH LGF  FGSR FK S A A GK+SDLPP SC
Sbjct: 122 LAAVAGHTLGFLLFGSRVFKKSSAPAPGKTSDLPPTSC 154

[Close]

BLAST of CmoCh01G006620 vs. TrEMBL
Match: M5W0K7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012818mg PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 8.3e-46
Identity = 93/151 (61.59%), Postives = 110/151 (72.85%), Query Frame = 1


Query: 9   HHHMQGMAPPPASSAASSGMTMHHRMMHMTFFWGTNAEILFRNWPGDRSGMYALALIFIF 68
           H HM  MA P +  + S+GM  H  MMHMTFFWGTNAE+LF  WPG  +GMY + L+F+F
Sbjct: 3   HGHMGVMASPSSMMSGSNGMMHHKMMMHMTFFWGTNAEVLFSKWPGSSTGMYYVCLLFVF 62

Query: 69  VLAFLVEWLSHSRLIREDSSSVAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVFLVAIGG 128
            LA +VEWLSH RLI+  SS V  GL +T +HT+RVGLAY+VMLAVMSFNVGVFLVA+ G
Sbjct: 63  ALAVIVEWLSHCRLIKAGSSDVVCGLAQTFLHTIRVGLAYMVMLAVMSFNVGVFLVAVAG 122

Query: 129 HCLGFFFFGSRFFKNSGAASGKSSDLPPLSC 160
           H +GF  FGSR FK       K SDLPP+SC
Sbjct: 123 HTVGFLLFGSRVFKKPDPEDEKDSDLPPMSC 153

[Close]

BLAST of CmoCh01G006620 vs. TrEMBL
Match: V4UFV7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029475mg PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 7.0e-45
Identity = 98/157 (62.42%), Postives = 119/157 (75.80%), Query Frame = 1


Query: 5   DETHHHHMQGMAPPPASSAASSGMTM--HHRMMHMTFFWGTNAEILFRNWPGDRSGMYAL 64
           D  HH H   M+PP + +  ++  TM  HH MMHMTFFWG N+EILF  WPG  SGMYAL
Sbjct: 2   DGMHHDH-GSMSPPMSMNNTNNTGTMMHHHNMMHMTFFWGKNSEILFSGWPGTSSGMYAL 61

Query: 65  ALIFIFVLAFLVEWLSHSRLIREDSSSVAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVF 124
           ALI +FVLA LVEWLSH +L++ D++ VAAGLI+TL+H +RVGLA+LVMLA+MSFN GVF
Sbjct: 62  ALIVVFVLAVLVEWLSHCKLMKPDANHVAAGLIQTLLHAIRVGLAFLVMLAIMSFNGGVF 121

Query: 125 LVAIGGHCLGFFFFGSRFFKNSGAASGKSSDLPPLSC 160
           LVA+ GH  GFF FGSR F N  +   K+SDLPP+SC
Sbjct: 122 LVAVAGHTFGFFIFGSRVF-NKSSPPPKTSDLPPMSC 156

[Close]

BLAST of CmoCh01G006620 vs. TrEMBL
Match: V4SCG0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029506mg PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.6e-44
Identity = 95/155 (61.29%), Postives = 114/155 (73.55%), Query Frame = 1


Query: 5   DETHHHHMQGMAPPPASSAASSGMTMHHRMMHMTFFWGTNAEILFRNWPGDRSGMYALAL 64
           ++TH H M GMAPPP        M  H  MMHMTFFWG NA +LF+ WPG  +GMYALAL
Sbjct: 2   NDTHKHEMGGMAPPPT-------MPRHKMMMHMTFFWGKNALVLFKGWPGTSTGMYALAL 61

Query: 65  IFIFVLAFLVEWLSHSRLIREDSSSVAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVFLV 124
           +F+F +  LVEWLSHSRLI+  + +VAAG+I+T MHT+RVGLA LVMLA+MSFNVGVFL 
Sbjct: 62  VFVFAMGILVEWLSHSRLIKTGTGNVAAGIIQTFMHTIRVGLANLVMLALMSFNVGVFLA 121

Query: 125 AIGGHCLGFFFFGSRFFKNSGAASGKSSDLPPLSC 160
           A+ GH LGF  FGSR F  S A   K++DL P+SC
Sbjct: 122 AVAGHSLGFLLFGSRVFHKS-APPPKTNDLSPMSC 148

[Close]

BLAST of CmoCh01G006620 vs. TAIR10
Match: AT5G59030.1 (AT5G59030.1 copper transporter 1)

HSP 1 Score: 166.4 bits (420), Expect = 1.4e-41
Identity = 93/168 (55.36%), Postives = 117/168 (69.64%), Query Frame = 1


Query: 9   HHHMQGMAPPPASSAASSGMTM-----------HHRM---MHMTFFWGTNAEILFRNWPG 68
           H HM GM P P+SS++SS  +M           HH M   MHMTFFWG N E+LF  WPG
Sbjct: 3   HDHMHGM-PRPSSSSSSSPSSMMNNGSMNEGGGHHHMKMMMHMTFFWGKNTEVLFSGWPG 62

Query: 69  DRSGMYALALIFIFVLAFLVEWLSHSRLIR---EDSSSVAAGLIRTLMHTVRVGLAYLVM 128
             SGMYAL LIF+F LA L EWL+HS L+R    DS++ AAGLI+T ++T+R+GLAYLVM
Sbjct: 63  TSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVM 122

Query: 129 LAVMSFNVGVFLVAIGGHCLGFFFFGSRFFKNSGAASGKSSDLPPLSC 160
           LAVMSFN GVFLVA+ GH +GF  FGS+ F+N+ +   K++ +PP  C
Sbjct: 123 LAVMSFNAGVFLVALAGHAVGFMLFGSQTFRNT-SDDRKTNYVPPSGC 168

[Close]

BLAST of CmoCh01G006620 vs. TAIR10
Match: AT3G46900.1 (AT3G46900.1 copper transporter 2)

HSP 1 Score: 158.7 bits (400), Expect = 3.0e-39
Identity = 85/152 (55.92%), Postives = 106/152 (69.74%), Query Frame = 1


Query: 9   HHHMQGMAPP-PASSAASSGMTMHHRMMHMTFFWGTNAEILFRNWPGDRSGMYALALIFI 68
           H HM  M PP P+SS+ S+  T H  MMHMTFFWG N E+LF  WPG  SGMYAL LI I
Sbjct: 3   HDHMHDMPPPSPSSSSMSNHTTPHMMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVI 62

Query: 69  FVLAFLVEWLSHSRLIR-EDSSSVAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVFLVAI 128
           F+LA + EWL+HS ++R   S++ AAGL +T ++T++ GL+YLVMLAVMSFN GVF+VAI
Sbjct: 63  FLLAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAI 122

Query: 129 GGHCLGFFFFGSRFFKNSGAASGKSSDLPPLS 159
            G+ +GFF FGS  FK        +  LPP S
Sbjct: 123 AGYGVGFFLFGSTTFKKPSDDQKTAELLPPSS 154

[Close]

BLAST of CmoCh01G006620 vs. TAIR10
Match: AT2G26975.1 (AT2G26975.1 Ctr copper transporter family)

HSP 1 Score: 139.4 bits (350), Expect = 1.9e-33
Identity = 73/131 (55.73%), Postives = 92/131 (70.23%), Query Frame = 1


Query: 14  GMAPPPASSAASSGMTMHHRMMHMTFFWGTNAEILFRNWPGDRSGMYALALIFIFVLAFL 73
           G  PP + S+  +    +  MMHMTFFWG N EILF  WPG   GMY L LI +F+LA +
Sbjct: 4   GNMPPSSPSSMVNHTNSNMIMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVI 63

Query: 74  VEWLSHSRLIR-EDSSSVAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVFLVAIGGHCLG 133
           VEWL+HS ++R   S+S A GL++T ++T++ GLAYLVMLAVMSFN GVF+VAI G  +G
Sbjct: 64  VEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAVG 123

Query: 134 FFFFGSRFFKN 144
           F  FGS  FKN
Sbjct: 124 FMLFGSTAFKN 134

[Close]

BLAST of CmoCh01G006620 vs. TAIR10
Match: AT2G37925.1 (AT2G37925.1 copper transporter 4)

HSP 1 Score: 118.2 bits (295), Expect = 4.5e-27
Identity = 61/113 (53.98%), Postives = 78/113 (69.03%), Query Frame = 1


Query: 34  MMHMTFFWGTNAEILFRNWPGDRSGMYALALIFIFVLAFLVEWL---SHSRLIREDSSSV 93
           ++H TF+WG N ++LF  WPG   GMYALALIF+F LAFL EWL   S +  I++ +  +
Sbjct: 29  LLHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQGADKL 88

Query: 94  AAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVFLVAIGGHCLGFFFFGSRFFKN 144
           A    RT M+TV+ G +YLV+LAV+SFN GVFL AI GH LGF  F  R F+N
Sbjct: 89  AKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRAFRN 141

[Close]

BLAST of CmoCh01G006620 vs. TAIR10
Match: AT5G59040.1 (AT5G59040.1 copper transporter 3)

HSP 1 Score: 113.6 bits (283), Expect = 1.1e-25
Identity = 62/133 (46.62%), Postives = 82/133 (61.65%), Query Frame = 1


Query: 16  APPPASSAASSGMTMHHRMMHMTFFWGTNAEILFRNWPGDRSGMYALALIFIFVLAFLVE 75
           AP P+ S+       H  MMHMTFFWG   E+LF  WPG    MY + L  IFV++   E
Sbjct: 11  APAPSPSSFFQHRHRHGGMMHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSE 70

Query: 76  WLSHSRLIREDSSSVAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVFLVAIGGHCLGFFF 135
            LS    ++   +S+  GL++T ++TVR  L+YLVMLAVMSFN GVF+ A+ G  LGF  
Sbjct: 71  CLSRCGFMKSGPASLGGGLLQTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLGFMI 130

Query: 136 FGSRFFKNSGAAS 149
           FGSR F+ + + S
Sbjct: 131 FGSRAFRATSSNS 143

[Close]

BLAST of CmoCh01G006620 vs. NCBI nr
Match: gi|449455068|ref|XP_004145275.1| (PREDICTED: copper transporter 1-like [Cucumis sativus])

HSP 1 Score: 236.5 bits (602), Expect = 3.2e-59
Identity = 120/148 (81.08%), Postives = 125/148 (84.46%), Query Frame = 1


Query: 1   MDATDETHHHHMQGMAPPPASSAASSGMTMHHRMMHMTFFWGTNAEILFRNWPGDRSGMY 60
           MDA  E H+HHM GM PPP SS AS  M  H  MMHMTFFWGTNAEILF  WPG+RSGMY
Sbjct: 1   MDAATEAHNHHMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMY 60

Query: 61  ALALIFIFVLAFLVEWLSHSRLIREDSSSVAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG 120
           ALALIFIFVLAFLVEWL+H RLI+EDSS  AAGLIRTLMHTVRVGLAYLVMLAVMSFNVG
Sbjct: 61  ALALIFIFVLAFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG 120

Query: 121 VFLVAIGGHCLGFFFFGSRFFKNSGAAS 149
           V LVAIGGHCLGFF FGS+FFK S A S
Sbjct: 121 VLLVAIGGHCLGFFLFGSKFFKRSEAVS 148

[Close]

BLAST of CmoCh01G006620 vs. NCBI nr
Match: gi|659115179|ref|XP_008457427.1| (PREDICTED: copper transporter 1 [Cucumis melo])

HSP 1 Score: 235.3 bits (599), Expect = 7.2e-59
Identity = 120/148 (81.08%), Postives = 124/148 (83.78%), Query Frame = 1


Query: 1   MDATDETHHHHMQGMAPPPASSAASSGMTMHHRMMHMTFFWGTNAEILFRNWPGDRSGMY 60
           MDA  E H+HHM GM PPP SS AS  M  H  MMHMTFFWGTNAEILF  WPG+RSGMY
Sbjct: 1   MDAAAEAHNHHMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMY 60

Query: 61  ALALIFIFVLAFLVEWLSHSRLIREDSSSVAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG 120
           ALALI IFVLAFLVEWL+H RLI+EDSS  AAGLIRTLMHTVRVGLAYLVMLAVMSFNVG
Sbjct: 61  ALALILIFVLAFLVEWLTHCRLIKEDSSQAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG 120

Query: 121 VFLVAIGGHCLGFFFFGSRFFKNSGAAS 149
           V LVAIGGHCLGFF FGSRFFK S A S
Sbjct: 121 VLLVAIGGHCLGFFLFGSRFFKRSEAVS 148

[Close]

BLAST of CmoCh01G006620 vs. NCBI nr
Match: gi|1000963312|ref|XP_015575496.1| (PREDICTED: copper transporter 1 [Ricinus communis])

HSP 1 Score: 199.5 bits (506), Expect = 4.3e-48
Identity = 107/160 (66.88%), Postives = 121/160 (75.62%), Query Frame = 1


Query: 8   HHHHMQGMAPPPASSAASS------GMTMHHR--MMHMTFFWGTNAEILFRNWPGDRSGM 67
           H H M GM     SS  ++      GM MHH   MMHMTFFWG NAEILF  WPG R+GM
Sbjct: 3   HGHDMPGMGGMTPSSTMNNTNSTGGGMMMHHHKMMMHMTFFWGENAEILFSGWPGARTGM 62

Query: 68  YALALIFIFVLAFLVEWLSHSRLIREDSSSVAAGLIRTLMHTVRVGLAYLVMLAVMSFNV 127
           Y LALIF+FVL+FLVEWLSHSRLI+  S  V AGLI+TL+HT+RVGLAYLVMLAVMSFN 
Sbjct: 63  YVLALIFVFVLSFLVEWLSHSRLIKPGSPHVTAGLIQTLLHTMRVGLAYLVMLAVMSFNG 122

Query: 128 GVFLVAIGGHCLGFFFFGSRFFKNSGAASGKSSDLPPLSC 160
           GVFLVA+ GHCLGF  FGSR FK +  A+ K+SDLPP+SC
Sbjct: 123 GVFLVAVAGHCLGFLIFGSRVFKKTPPAA-KTSDLPPMSC 161

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BLAST of CmoCh01G006620 vs. NCBI nr
Match: gi|1009108691|ref|XP_015886064.1| (PREDICTED: copper transporter 1-like [Ziziphus jujuba])

HSP 1 Score: 195.7 bits (496), Expect = 6.3e-47
Identity = 101/153 (66.01%), Postives = 118/153 (77.12%), Query Frame = 1


Query: 9   HHHMQGMAPPPASSAASSGMTMHHRMM--HMTFFWGTNAEILFRNWPGDRSGMYALALIF 68
           HH M  MA PP+ +  + GM  HH+MM  HMTFFWG NAEILF  WPG  +GMY LAL+F
Sbjct: 8   HHDMGDMASPPSMNG-TEGMPHHHKMMMMHMTFFWGKNAEILFNKWPGTSTGMYVLALVF 67

Query: 69  IFVLAFLVEWLSHSRLIREDSSSVAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVFLVAI 128
           IFVLA LVEWLSH +LI++ S+ VAAGL++T +H +RVGLAY+VMLAVMSFNVGVFLVAI
Sbjct: 68  IFVLALLVEWLSHCKLIKDGSNHVAAGLVQTFLHAIRVGLAYMVMLAVMSFNVGVFLVAI 127

Query: 129 GGHCLGFFFFGSRFFKNSGAASGKSSDLPPLSC 160
            GH +GFFFFGSR FK S       SDLPP+SC
Sbjct: 128 AGHTVGFFFFGSRVFKKSEFEKA-GSDLPPMSC 158

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BLAST of CmoCh01G006620 vs. NCBI nr
Match: gi|645216538|ref|XP_008221659.1| (PREDICTED: copper transporter 6 [Prunus mume])

HSP 1 Score: 193.7 bits (491), Expect = 2.4e-46
Identity = 94/155 (60.65%), Postives = 114/155 (73.55%), Query Frame = 1


Query: 9   HHHMQGMAPPPASSAA----SSGMTMHHRMMHMTFFWGTNAEILFRNWPGDRSGMYALAL 68
           H HM+GMA PP+  ++    S+GM  H  MMHMTFFWGTNAE+LF  WPG  +GMY + L
Sbjct: 3   HGHMEGMASPPSPPSSMMNGSNGMMHHKMMMHMTFFWGTNAEVLFSKWPGSSTGMYYVCL 62

Query: 69  IFIFVLAFLVEWLSHSRLIREDSSSVAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVFLV 128
           +F+F LA +VEWLSH RLI+  SS V  GL +T +HT+RVGLAY+VMLAVMSFN+GVFLV
Sbjct: 63  LFVFALAVIVEWLSHCRLIKAGSSDVVCGLAQTFLHTIRVGLAYMVMLAVMSFNIGVFLV 122

Query: 129 AIGGHCLGFFFFGSRFFKNSGAASGKSSDLPPLSC 160
           A+ GH +GF  FGSR FK       K SDLPP+SC
Sbjct: 123 AVAGHTVGFLLFGSRVFKKPDPEDEKGSDLPPMSC 157

The following BLAST results are available for this feature:

BLAST of CmoCh01G006620 vs. Swiss-Prot


Match Name	E-value	Identity	Description
COPT1_ARATH	2.6e-40	55.36	Copper transporter 1 OS=Arabidopsis thaliana GN=COPT1 PE=2 SV=2	[more]
COPT2_ARATH	5.3e-38	55.92	Copper transporter 2 OS=Arabidopsis thaliana GN=COPT2 PE=2 SV=1	[more]
COPT6_ARATH	3.3e-32	55.73	Copper transporter 6 OS=Arabidopsis thaliana GN=COPT6 PE=2 SV=1	[more]
COPT1_ORYSJ	4.1e-30	55.88	Copper transporter 1 OS=Oryza sativa subsp. japonica GN=COPT1 PE=2 SV=1	[more]
COPT4_ARATH	8.0e-26	53.98	Copper transporter 4 OS=Arabidopsis thaliana GN=COPT4 PE=2 SV=2	[more]

BLAST of CmoCh01G006620 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVF3_CUCSA	2.2e-59	81.08	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G526830 PE=4 SV=1	[more]
A0A061GWU0_THECC	2.8e-46	63.29	Copper transporter, putative OS=Theobroma cacao GN=TCM_041729 PE=4 SV=1	[more]
M5W0K7_PRUPE	8.3e-46	61.59	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012818mg PE=4 SV=1	[more]
V4UFV7_9ROSI	7.0e-45	62.42	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029475mg PE=4 SV=1	[more]
V4SCG0_9ROSI	1.6e-44	61.29	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029506mg PE=4 SV=1	[more]

BLAST of CmoCh01G006620 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59030.1	1.4e-41	55.36	copper transporter 1	[more]
AT3G46900.1	3.0e-39	55.92	copper transporter 2	[more]
AT2G26975.1	1.9e-33	55.73	Ctr copper transporter family	[more]
AT2G37925.1	4.5e-27	53.98	copper transporter 4	[more]
AT5G59040.1	1.1e-25	46.62	copper transporter 3	[more]

BLAST of CmoCh01G006620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449455068\|ref\|XP_004145275.1\|	3.2e-59	81.08	PREDICTED: copper transporter 1-like [Cucumis sativus]	[more]
gi\|659115179\|ref\|XP_008457427.1\|	7.2e-59	81.08	PREDICTED: copper transporter 1 [Cucumis melo]	[more]
gi\|1000963312\|ref\|XP_015575496.1\|	4.3e-48	66.88	PREDICTED: copper transporter 1 [Ricinus communis]	[more]
gi\|1009108691\|ref\|XP_015886064.1\|	6.3e-47	66.01	PREDICTED: copper transporter 1-like [Ziziphus jujuba]	[more]
gi\|645216538\|ref\|XP_008221659.1\|	2.4e-46	60.65	PREDICTED: copper transporter 6 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007274	Cop_transporter

Vocabulary: **Molecular Function**
Term	Definition
GO:0005375	copper ion transmembrane transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0035434	copper ion transmembrane transport

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035434	copper ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005375	copper ion transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G006620.1	CmoCh01G006620.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007274	Ctr copper transporter	PANTHER	PTHR12483	SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS	coord: 5..159 score: 5.4
IPR007274	Ctr copper transporter	PFAM	PF04145	Ctr	coord: 37..136 score: 1.0
None	No IPR available	PANTHER	PTHR12483:SF45	SUBFAMILY NOT NAMED	coord: 5..159 score: 5.4

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G006620	Cucumber (Chinese Long) v3	cmocucB0500
CmoCh01G006620	Cucumber (Chinese Long) v3	cmocucB0537
CmoCh01G006620	Cucumber (Chinese Long) v3	cmocucB0550
CmoCh01G006620	Cucumber (Chinese Long) v3	cmocucB0563
CmoCh01G006620	Watermelon (97103) v2	cmowmbB448
CmoCh01G006620	Watermelon (97103) v2	cmowmbB424
CmoCh01G006620	Watermelon (97103) v2	cmowmbB451
CmoCh01G006620	Watermelon (97103) v2	cmowmbB476
CmoCh01G006620	Wax gourd	cmowgoB0589
CmoCh01G006620	Wax gourd	cmowgoB0579
CmoCh01G006620	Wax gourd	cmowgoB0590
CmoCh01G006620	Cucurbita moschata (Rifu)	cmocmoB173
CmoCh01G006620	Cucurbita moschata (Rifu)	cmocmoB205
CmoCh01G006620	Cucurbita moschata (Rifu)	cmocmoB368
CmoCh01G006620	Cucurbita moschata (Rifu)	cmocmoB375
CmoCh01G006620	Cucumber (Gy14) v1	cgycmoB0403
CmoCh01G006620	Cucumber (Gy14) v1	cgycmoB0502
CmoCh01G006620	Cucurbita maxima (Rimu)	cmacmoB226
CmoCh01G006620	Cucurbita maxima (Rimu)	cmacmoB259
CmoCh01G006620	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G006620	Cucurbita maxima (Rimu)	cmacmoB815
CmoCh01G006620	Wild cucumber (PI 183967)	cmocpiB420
CmoCh01G006620	Wild cucumber (PI 183967)	cmocpiB452
CmoCh01G006620	Cucumber (Chinese Long) v2	cmocuB416
CmoCh01G006620	Cucumber (Chinese Long) v2	cmocuB449
CmoCh01G006620	Melon (DHL92) v3.5.1	cmomeB382
CmoCh01G006620	Melon (DHL92) v3.5.1	cmomeB412
CmoCh01G006620	Watermelon (Charleston Gray)	cmowcgB382
CmoCh01G006620	Watermelon (Charleston Gray)	cmowcgB403
CmoCh01G006620	Watermelon (97103) v1	cmowmB408
CmoCh01G006620	Watermelon (97103) v1	cmowmB422
CmoCh01G006620	Cucurbita pepo (Zucchini)	cmocpeB441
CmoCh01G006620	Cucurbita pepo (Zucchini)	cmocpeB451
CmoCh01G006620	Bottle gourd (USVL1VR-Ls)	cmolsiB391
CmoCh01G006620	Bottle gourd (USVL1VR-Ls)	cmolsiB403
CmoCh01G006620	Cucumber (Gy14) v2	cgybcmoB098
CmoCh01G006620	Cucumber (Gy14) v2	cgybcmoB344
CmoCh01G006620	Cucumber (Gy14) v2	cgybcmoB480
CmoCh01G006620	Melon (DHL92) v3.6.1	cmomedB439
CmoCh01G006620	Melon (DHL92) v3.6.1	cmomedB470
CmoCh01G006620	Silver-seed gourd	carcmoB0217
CmoCh01G006620	Silver-seed gourd	carcmoB0518
CmoCh01G006620	Silver-seed gourd	carcmoB0596
CmoCh01G006620	Silver-seed gourd	carcmoB1337