CmoCh01G006170 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G006170
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Transmembrane protein, putative
Location	Cmo_Chr01 : 3180207 .. 3181037 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTTTCACTTGGTTGTATATCGGCTTAGGCTTGGCTCTGGGGTTCCTCTTTTTGGGCATAGTTGCAGAGCTTTACTATCTTCTATGGCGGAACAACAAGAGAATCAATACAACAGGGGTTCAACACGACGCCTACAACAAACCCCGCCCACTTCCTCTGATTCCTTCTGAAACTAACTCCACTCGTGAAATTACCAGAAACCCCCTTGAGAATCGCCATGGATTGGACCTTGAGTTCGGCAGCGGAGAGGATTTGTTGTTGAAGACGGCGGCGGAAGACGATGAACACGATGAGGCAGAGGAAGAGGATGTTGAGCTGATGGCGATTTACAATCTCGCAGGGCAACCGAGATTTCTGTTCACAATCAAAGAGGAAACGAGGGAAGATTTGGAATCTGAGGACGCGAAATCGAGAGGCGATAGAAGCAGAAAAGGGTCAAGAAATCGCAGCTTGAGCGACATAATTACCGCCATTGAAACTCCATTTTTCACTCCAATCGCTTCTCCTCCATTGAAAGCTTCTCCTCTCTGTTCTTTAGATTCATACAAACTCCATGAATTCAATCCGCTCTTCGAATCCTCATCTGAATTGGAGCAGAATCTGAACAGGATGAGATCCTCGCCGCCTCCCAAGTTCAAATTTCTCCGAGATGCAGAGGAGAAACTATACAGAAGATTAATGGAAGAAGCTCAAAAAAGAGGCGAGATCCTAAACACCAAAAACGAACAGAGAAAGCCCTCAAGTTCTTCCCAGGTTCTTCCTCTGGTTTCTTCCCCTCCAGAATTCCGAACACTTCCCAACCACAAGATCACGCCCTTCTCTTAA

mRNA sequence

ATGGCTTCTTTCACTTGGTTGTATATCGGCTTAGGCTTGGCTCTGGGGTTCCTCTTTTTGGGCATAGTTGCAGAGCTTTACTATCTTCTATGGCGGAACAACAAGAGAATCAATACAACAGGGGTTCAACACGACGCCTACAACAAACCCCGCCCACTTCCTCTGATTCCTTCTGAAACTAACTCCACTCGTGAAATTACCAGAAACCCCCTTGAGAATCGCCATGGATTGGACCTTGAGTTCGGCAGCGGAGAGGATTTGTTGTTGAAGACGGCGGCGGAAGACGATGAACACGATGAGGCAGAGGAAGAGGATGTTGAGCTGATGGCGATTTACAATCTCGCAGGGCAACCGAGATTTCTGTTCACAATCAAAGAGGAAACGAGGGAAGATTTGGAATCTGAGGACGCGAAATCGAGAGGCGATAGAAGCAGAAAAGGGTCAAGAAATCGCAGCTTGAGCGACATAATTACCGCCATTGAAACTCCATTTTTCACTCCAATCGCTTCTCCTCCATTGAAAGCTTCTCCTCTCTGTTCTTTAGATTCATACAAACTCCATGAATTCAATCCGCTCTTCGAATCCTCATCTGAATTGGAGCAGAATCTGAACAGGATGAGATCCTCGCCGCCTCCCAAGTTCAAATTTCTCCGAGATGCAGAGGAGAAACTATACAGAAGATTAATGGAAGAAGCTCAAAAAAGAGGCGAGATCCTAAACACCAAAAACGAACAGAGAAAGCCCTCAAGTTCTTCCCAGGTTCTTCCTCTGGTTTCTTCCCCTCCAGAATTCCGAACACTTCCCAACCACAAGATCACGCCCTTCTCTTAA

Coding sequence (CDS)

ATGGCTTCTTTCACTTGGTTGTATATCGGCTTAGGCTTGGCTCTGGGGTTCCTCTTTTTGGGCATAGTTGCAGAGCTTTACTATCTTCTATGGCGGAACAACAAGAGAATCAATACAACAGGGGTTCAACACGACGCCTACAACAAACCCCGCCCACTTCCTCTGATTCCTTCTGAAACTAACTCCACTCGTGAAATTACCAGAAACCCCCTTGAGAATCGCCATGGATTGGACCTTGAGTTCGGCAGCGGAGAGGATTTGTTGTTGAAGACGGCGGCGGAAGACGATGAACACGATGAGGCAGAGGAAGAGGATGTTGAGCTGATGGCGATTTACAATCTCGCAGGGCAACCGAGATTTCTGTTCACAATCAAAGAGGAAACGAGGGAAGATTTGGAATCTGAGGACGCGAAATCGAGAGGCGATAGAAGCAGAAAAGGGTCAAGAAATCGCAGCTTGAGCGACATAATTACCGCCATTGAAACTCCATTTTTCACTCCAATCGCTTCTCCTCCATTGAAAGCTTCTCCTCTCTGTTCTTTAGATTCATACAAACTCCATGAATTCAATCCGCTCTTCGAATCCTCATCTGAATTGGAGCAGAATCTGAACAGGATGAGATCCTCGCCGCCTCCCAAGTTCAAATTTCTCCGAGATGCAGAGGAGAAACTATACAGAAGATTAATGGAAGAAGCTCAAAAAAGAGGCGAGATCCTAAACACCAAAAACGAACAGAGAAAGCCCTCAAGTTCTTCCCAGGTTCTTCCTCTGGTTTCTTCCCCTCCAGAATTCCGAACACTTCCCAACCACAAGATCACGCCCTTCTCTTAA

Homology

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BLAST of CmoCh01G006170 vs. TrEMBL
Match: A0A0A0LXD2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G505940 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 6.8e-80
Identity = 185/282 (65.60%), Postives = 208/282 (73.76%), Query Frame = 1


Query: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGV----QHDAYNKPRPLPLI 60
           MAS +WLYIGLG+ LGFLFLGI+ ELYYLL R NKRIN T       H  ++K   L LI
Sbjct: 1   MASSSWLYIGLGIILGFLFLGILTELYYLLCRKNKRINDTSEVEEDNHHHFSKQPSLRLI 60

Query: 61  PSETNSTREITRNPLENRHGLDLEFGSGEDLLLKTAAEDDEHD-EAEEEDVELMAIYNLA 120
           PSET       +NP +NR G D+E GSGE  LLKT   ++E + E  E+D+EL  IYNLA
Sbjct: 61  PSET-------QNPPQNRCGFDVEHGSGEVSLLKTTGREEEDEGEETEDDLELQGIYNLA 120

Query: 121 GQPRFLFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKA 180
           GQPRFLFTI EET+EDLESED KSR     KGSRNRSLSDIITAIETPFFTP+ASPPLKA
Sbjct: 121 GQPRFLFTINEETKEDLESEDGKSR-----KGSRNRSLSDIITAIETPFFTPMASPPLKA 180

Query: 181 SPLCSLD----SYKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEE 240
           S   SL+    +YK+H FNPLFESS E+EQNL R+RSSPPPKFKFLRDAEEKLYRRLMEE
Sbjct: 181 SSPLSLNLETYNYKVHGFNPLFESSEEVEQNLKRLRSSPPPKFKFLRDAEEKLYRRLMEE 240

Query: 241 A-QKRGEILNTKNEQRK----------PSSSSQVLPLVSSPP 263
           A Q++ EI   KNEQRK           SSSSQVLPL+SSPP
Sbjct: 241 AHQRKTEI--PKNEQRKVINNNQKFIYSSSSSQVLPLISSPP 268

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BLAST of CmoCh01G006170 vs. TrEMBL
Match: A5AT40_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006045 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 3.9e-59
Identity = 158/314 (50.32%), Postives = 192/314 (61.15%), Query Frame = 1


Query: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGVQHDAYNKPRPLPLI---- 60
           MASF+ L I L L  G L L +VAELYYLLW   KRI    +++D  N  + L  I    
Sbjct: 1   MASFSGLGICLSLVFGCLLLALVAELYYLLWWK-KRITNREIEYDYSNXAKELFYIFCWK 60

Query: 61  ---PSETNSTREIT-RNPLENRHG-LDLEFGSGEDLLLKTAAEDDEHDEAEEEDVELMAI 120
              P  ++ST++++ R+P+ N H   D E GSG+DLLLK   E       E  + ELM +
Sbjct: 61  RPAPLSSSSTQQLSVRDPVPNGHDEQDPELGSGKDLLLKAFEE-------EGVESELMRL 120

Query: 121 YNLAGQPRFLFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASP 180
           +NLAG PRFLFTIKEET+EDLES+D KS+GDRSR  SR RSLSD++ AI+TPF TP+ASP
Sbjct: 121 HNLAGPPRFLFTIKEETKEDLESDDGKSKGDRSRTASRTRSLSDVLVAIDTPFLTPLASP 180

Query: 181 PLKASPLCSLDSYKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEE 240
           PLK+     LD Y  H FNPLFESS+E E  LNR+RSSPPPKFKFLRDAEEKLYRRLMEE
Sbjct: 181 PLKSPTFNPLDCYSQHGFNPLFESSAESE--LNRLRSSPPPKFKFLRDAEEKLYRRLMEE 240

Query: 241 AQKRGE--------------------------------ILNTKNEQRK--------PSSS 266
           A+K G                                 I+  KN++R+         S+ 
Sbjct: 241 AEKSGIKNGGFVQDSGVKAPMNVISSMTPEERDGSFIRIIVGKNKERELHHHLPQYHSTP 300

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BLAST of CmoCh01G006170 vs. TrEMBL
Match: M5WLR5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019890mg PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.5e-58
Identity = 154/317 (48.58%), Postives = 189/317 (59.62%), Query Frame = 1


Query: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGVQHDAYNKPRPL------- 60
           M SF+ L IGL L  G L L +VAELYYLLW   KRI    ++ D  N  + L       
Sbjct: 1   MTSFSGLGIGLSLVFGCLLLALVAELYYLLWWK-KRITNREIEEDYSNHAKELFQFSCWK 60

Query: 61  -PLIPSETNSTREITRNPLENRHGL--DLEFGSGEDLLLKTAAEDDEHDEAEEEDVELMA 120
            P      ++++E  R P  N      DLE GS +DLLLK   E++       E  ELM 
Sbjct: 61  KPSSLQTNSNSQENVREPDANHSSSESDLELGSSKDLLLKLNGEENV------EISELMR 120

Query: 121 IYNLAGQPRFLFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIAS 180
           ++NLAG PRFLFTI EET+EDLESED KSRGDRSRKGSR RSLSD+I +++TP+ +P+ S
Sbjct: 121 LHNLAGPPRFLFTINEETKEDLESEDGKSRGDRSRKGSRTRSLSDLILSVDTPYLSPLPS 180

Query: 181 PPLKASPLCSLDSYKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLME 240
           P LK+SPL SLDSYK H FNPLFESS+E E  L+R+RSSPPPKFKFLRDAEEKL+RRLME
Sbjct: 181 PSLKSSPLSSLDSYKHHGFNPLFESSTEAE--LSRLRSSPPPKFKFLRDAEEKLFRRLME 240

Query: 241 EAQKR-----------------GEILNTKNEQ------------------------RKPS 267
           EA+KR                    + T+ +                         + P 
Sbjct: 241 EAEKRAAKNCGSAQDFGVNATPNSTMATEEKDGSFIRLVVGKNKENQREHHHQNLPQNPP 300

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BLAST of CmoCh01G006170 vs. TrEMBL
Match: A0A061H031_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_041865 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.2e-57
Identity = 156/314 (49.68%), Postives = 189/314 (60.19%), Query Frame = 1


Query: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGVQHDAYNKPRPLPLI---- 60
           M SF+ L IGL L  G L L +VAELYYLLW   KRI ++ V+ D  N  + L  +    
Sbjct: 1   MTSFSGLGIGLSLVFGCLLLALVAELYYLLWWK-KRIASSEVEDDYSNYAKELIHLFCWK 60

Query: 61  -------PSETNSTREITRNPLENRHGLDLEFGSGEDLLLKTAAEDDEHDEAEEEDVELM 120
                   + T + +++ ++   N   LD E GSG+DLLLK   E       E  + ELM
Sbjct: 61  KSAALHATTTTTNNQDLVKDQDTNGVELDPELGSGKDLLLKGFGE-------EGVESELM 120

Query: 121 AIYNLAGQPRFLFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIA 180
            ++NLAG PRFLFTIKEET+EDLESED +SR DRSRKGSR RSLSD+I  ++TPF +P+A
Sbjct: 121 RLHNLAGPPRFLFTIKEETKEDLESEDGRSRCDRSRKGSRTRSLSDLILTVDTPFISPLA 180

Query: 181 SPPLKASPLCSLDSYKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLM 240
           SPPLK+ PL  LDSY    FNPLFESS++ E  LN++RSSPPPKFKFLRDAEEKL RRLM
Sbjct: 181 SPPLKSPPLNPLDSYHRQGFNPLFESSTDAE--LNKLRSSPPPKFKFLRDAEEKLLRRLM 240

Query: 241 EEAQKR---------------------------GEILN---TKNEQ------RKPSSSSQ 268
            EA+KR                           G  L     KN +      + PSSSSQ
Sbjct: 241 LEAEKRVQRNGGSLQDSGVKAVNSTASVTEETEGSFLKFIVGKNREPLQYLPQYPSSSSQ 300

[Close]

BLAST of CmoCh01G006170 vs. TrEMBL
Match: B9HPI8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s03470g PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 5.2e-56
Identity = 149/314 (47.45%), Postives = 186/314 (59.24%), Query Frame = 1


Query: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGVQHDAYNKPRPLPLI---- 60
           M SF+ L IGLGL  G L L IVAELYYLLW   +  N    + D Y+            
Sbjct: 1   MTSFSELGIGLGLVFGCLLLAIVAELYYLLWWKKRISNREVEEDDGYSSNYAKGFFHLIC 60

Query: 61  ---PS--ETNSTREITRNPLENRHGLDLEFGSGEDLLLKTAAEDDEHDEAEEEDVELMAI 120
              PS   +N T+++ R+P       D E G+ +DLL+K   E       E  + E+M +
Sbjct: 61  WKKPSFFRSNITQDVVRDPEAPCQEPDQELGTSKDLLIKAFGE-------ESAESEIMRL 120

Query: 121 YNLAGQPRFLFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASP 180
           +NL G PRFLFTIKEET+EDLES+D KSRGDRSRKGSR +SLSD++  I+TPF +P+ASP
Sbjct: 121 HNLCGPPRFLFTIKEETKEDLESDDVKSRGDRSRKGSRTKSLSDLMVTIDTPFLSPLASP 180

Query: 181 PLKASPLCSLDSYKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEE 240
            LK+ P+  LDSY  H FNPLFESS E E  L+R+RSSPPP+FKFLRDAE KL+RRLMEE
Sbjct: 181 RLKSPPVNVLDSYHHHGFNPLFESSVEAE--LSRLRSSPPPRFKFLRDAEAKLFRRLMEE 240

Query: 241 AQKRG-------------EILNT-----------------KNEQRK--------PSSSSQ 268
           A+KR              ++ N+                 KN++ +         SSSSQ
Sbjct: 241 AEKRASKNCVSVQDSSEIKVSNSTMITEETEGSFLGFIVGKNKESEILHHLPQYHSSSSQ 300

[Close]

BLAST of CmoCh01G006170 vs. TAIR10
Match: AT5G59350.1 (AT5G59350.1 unknown protein)

HSP 1 Score: 135.2 bits (339), Expect = 6.2e-32
Identity = 113/256 (44.14%), Postives = 140/256 (54.69%), Query Frame = 1


Query: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLW--RNNKRI--------NTTGVQHDAYNKP 60
           M + + L IGL L  GFL L +V E+YYLL   ++ KR+             Q + Y K 
Sbjct: 1   MKTISGLGIGLSLMFGFLLLALVGEVYYLLRCKKHKKRVISQESEEEKEEEQQQNGYAKE 60

Query: 61  --------RPLPLIPSETNSTREITRNPLENRHGLDLEFGSGEDLLLKTAAEDDEHDEAE 120
                   +P  L  +      E++ N   N    DLE G     L+K     D   EAE
Sbjct: 61  LIQLFCFKKPQSLQQNNGGREGEVSMNEDGNP---DLELG-----LMKHLNGGDLGFEAE 120

Query: 121 EEDVELMAIYNLAGQPRFLFTIKEETREDLESEDAKSRGDRSRKGSRNR--SLSDIITAI 180
                LM ++N     RFLFTI EET+ DLESED    G +SR GSR+R  SLSD+    
Sbjct: 121 -----LMKLHN----QRFLFTIMEETKADLESED----GGKSRLGSRSRRRSLSDVPNDC 180

Query: 181 ETPFFTPIASPPLKASPLCSLDSYKLHEFNPLFESSSELEQN-LNRMRSSPPPKFKFLRD 236
            TP FTP+ASP   +SPL   +SY  H FNPLFES  ELE N   R  SSPPPKFKF+RD
Sbjct: 181 NTPGFTPLASPKKSSSPL---ESYPHHGFNPLFESDGELEFNKFFRSSSSPPPKFKFMRD 232

[Close]

BLAST of CmoCh01G006170 vs. TAIR10
Match: AT2G39560.1 (AT2G39560.1 Putative membrane lipoprotein)

HSP 1 Score: 85.1 bits (209), Expect = 7.3e-17
Identity = 81/255 (31.76%), Postives = 117/255 (45.88%), Query Frame = 1


Query: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGVQHDAYNKP--RPLPLIPS 60
           M S + + + L +  G L L ++AELYYLLW   +         + Y+ P  R L  I  
Sbjct: 1   MRSLSSVGLALSIVFGCLLLALLAELYYLLWCKKRSTTRRPDFRNDYSTPGTRELLFIFC 60

Query: 61  ETNSTREITRNPLENRHGLDLEFGSGEDLLLKTAAEDDEHDEAEEEDVELMAIYNLAGQ- 120
            ++ST   + +P  +         + +   L    E                  N+ G  
Sbjct: 61  CSSSTNPSSSSPSSSSFSNPKPIDTQQQCPLNNGFE------------------NVGGPG 120

Query: 121 --PRFLFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIET-----PFFTPIAS 180
             PRFLFTI EET E++ESED  S        ++ +SL+D+   +E+     P+ TP AS
Sbjct: 121 LVPRFLFTIMEETVEEMESEDVVS--------TKGKSLNDLFLNMESGVITPPYLTPRAS 180

Query: 181 PPLKASPLCSL----DSYKLHEFNPLFESSSELEQN----------LNRMRSSPPPKFKF 232
           P L   PL  L     + +  E + LFESSS+ E N           +   SSP  +FKF
Sbjct: 181 PSLFTPPLTPLLMESCNGRKEEISSLFESSSDAEFNRLVRSSPLSSSHSPSSSPLSRFKF 229

[Close]

BLAST of CmoCh01G006170 vs. NCBI nr
Match: gi|659115304|ref|XP_008457488.1| (PREDICTED: uncharacterized protein LOC103497168 [Cucumis melo])

HSP 1 Score: 308.5 bits (789), Expect = 1.2e-80
Identity = 185/286 (64.69%), Postives = 205/286 (71.68%), Query Frame = 1


Query: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGV----QHDAYNKPRPLPLI 60
           MAS +WLYIGLG+ LGFLFLGI+ ELYYLL R NKRIN T       H  + K     LI
Sbjct: 1   MASSSWLYIGLGIVLGFLFLGILTELYYLLCRKNKRINDTSEVEEDNHHHFTKQPSRRLI 60

Query: 61  PSETNSTREITRNPLENRHGLDLEFGSGEDLLLKTAA-EDDEHDEAEEEDVELMAIYNLA 120
           P+ET       +NP ENR G D E GSGE  LLKT   E+++ DE  E+D+EL  IYNLA
Sbjct: 61  PTET-------QNPPENRRGFDAELGSGEVSLLKTTGREEEDEDEETEDDLELQGIYNLA 120

Query: 121 GQPRFLFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKA 180
           GQPRFLFTI EET+EDLESED KSR     KGSRNRSLSDII AIETPFFTP+ASPPLKA
Sbjct: 121 GQPRFLFTINEETKEDLESEDGKSR-----KGSRNRSLSDIIAAIETPFFTPMASPPLKA 180

Query: 181 SPLCSLD----SYKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEE 240
           S   SL+    +YK+H FNPLFESS ELEQNL R+RSSPPPKFKFLRDAEEKLYRRLMEE
Sbjct: 181 SSPLSLNLESYNYKVHGFNPLFESSEELEQNLKRLRSSPPPKFKFLRDAEEKLYRRLMEE 240

Query: 241 AQKRGEILNTKNEQRK---------------PSSSSQVLPLVSSPP 263
           AQ++ EI   KNEQRK                SSSSQVLPL+SSPP
Sbjct: 241 AQRKTEI--PKNEQRKVINNNNNNNNQRFIYSSSSSQVLPLISSPP 272

[Close]

BLAST of CmoCh01G006170 vs. NCBI nr
Match: gi|449464934|ref|XP_004150184.1| (PREDICTED: uncharacterized protein LOC101218094 [Cucumis sativus])

HSP 1 Score: 305.4 bits (781), Expect = 9.8e-80
Identity = 185/282 (65.60%), Postives = 208/282 (73.76%), Query Frame = 1


Query: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGV----QHDAYNKPRPLPLI 60
           MAS +WLYIGLG+ LGFLFLGI+ ELYYLL R NKRIN T       H  ++K   L LI
Sbjct: 1   MASSSWLYIGLGIILGFLFLGILTELYYLLCRKNKRINDTSEVEEDNHHHFSKQPSLRLI 60

Query: 61  PSETNSTREITRNPLENRHGLDLEFGSGEDLLLKTAAEDDEHD-EAEEEDVELMAIYNLA 120
           PSET       +NP +NR G D+E GSGE  LLKT   ++E + E  E+D+EL  IYNLA
Sbjct: 61  PSET-------QNPPQNRCGFDVEHGSGEVSLLKTTGREEEDEGEETEDDLELQGIYNLA 120

Query: 121 GQPRFLFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKA 180
           GQPRFLFTI EET+EDLESED KSR     KGSRNRSLSDIITAIETPFFTP+ASPPLKA
Sbjct: 121 GQPRFLFTINEETKEDLESEDGKSR-----KGSRNRSLSDIITAIETPFFTPMASPPLKA 180

Query: 181 SPLCSLD----SYKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEE 240
           S   SL+    +YK+H FNPLFESS E+EQNL R+RSSPPPKFKFLRDAEEKLYRRLMEE
Sbjct: 181 SSPLSLNLETYNYKVHGFNPLFESSEEVEQNLKRLRSSPPPKFKFLRDAEEKLYRRLMEE 240

Query: 241 A-QKRGEILNTKNEQRK----------PSSSSQVLPLVSSPP 263
           A Q++ EI   KNEQRK           SSSSQVLPL+SSPP
Sbjct: 241 AHQRKTEI--PKNEQRKVINNNQKFIYSSSSSQVLPLISSPP 268

[Close]

BLAST of CmoCh01G006170 vs. NCBI nr
Match: gi|1009115148|ref|XP_015874074.1| (PREDICTED: uncharacterized protein LOC107411078 [Ziziphus jujuba])

HSP 1 Score: 238.8 bits (608), Expect = 1.1e-59
Identity = 159/323 (49.23%), Postives = 186/323 (57.59%), Query Frame = 1


Query: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGVQHDAYNKP---------- 60
           M SF+ L + L +  G L L +VAELYYLLW   KRI    ++ +  N            
Sbjct: 1   MTSFSGLGLSLSIVFGCLLLALVAELYYLLWWKKKRITDREIEDEYRNFAKELFHSVCWK 60

Query: 61  RPLPLIPSETNSTREITRNPLENRHGLDLEFG-SGEDLLLKTAAEDDEHDEAEEEDVELM 120
           RP P+  +ET   R+   + + N H  DLE G S +DLLLKT  E       E  + ELM
Sbjct: 61  RPSPVHTNETKEIRDHHPDAIINGHEPDLELGGSTKDLLLKTNGE-------EGVESELM 120

Query: 121 AIYNLAGQPRFLFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIA 180
            ++NLAG PRFLFTIKEET+EDLESED KSRGDRSRKGSR RSLSD+I A++TPF TP+A
Sbjct: 121 RLHNLAGPPRFLFTIKEETKEDLESEDGKSRGDRSRKGSRTRSLSDLIVAVDTPFLTPLA 180

Query: 181 SPPLKASPLCSLDSYKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLM 240
           SPPLK+SPL  LDSYK H FNPLFES++       R +SSPPPKFKFLRDAEEKLYRRLM
Sbjct: 181 SPPLKSSPLNPLDSYKHHGFNPLFESTT---TEAERFKSSPPPKFKFLRDAEEKLYRRLM 240

Query: 241 EEAQKRGE------------------ILNTKNEQRK------------------------ 268
           EEA+KR                       T  E +K                        
Sbjct: 241 EEAEKRASQNCGSAAQDSMAKTQAPFNSTTVAEDQKDGSFLTFIVGKNKERELNHHHHHR 300

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BLAST of CmoCh01G006170 vs. NCBI nr
Match: gi|147810042|emb|CAN69364.1| (hypothetical protein VITISV_006045 [Vitis vinifera])

HSP 1 Score: 236.5 bits (602), Expect = 5.6e-59
Identity = 158/314 (50.32%), Postives = 192/314 (61.15%), Query Frame = 1


Query: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGVQHDAYNKPRPLPLI---- 60
           MASF+ L I L L  G L L +VAELYYLLW   KRI    +++D  N  + L  I    
Sbjct: 1   MASFSGLGICLSLVFGCLLLALVAELYYLLWWK-KRITNREIEYDYSNXAKELFYIFCWK 60

Query: 61  ---PSETNSTREIT-RNPLENRHG-LDLEFGSGEDLLLKTAAEDDEHDEAEEEDVELMAI 120
              P  ++ST++++ R+P+ N H   D E GSG+DLLLK   E       E  + ELM +
Sbjct: 61  RPAPLSSSSTQQLSVRDPVPNGHDEQDPELGSGKDLLLKAFEE-------EGVESELMRL 120

Query: 121 YNLAGQPRFLFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASP 180
           +NLAG PRFLFTIKEET+EDLES+D KS+GDRSR  SR RSLSD++ AI+TPF TP+ASP
Sbjct: 121 HNLAGPPRFLFTIKEETKEDLESDDGKSKGDRSRTASRTRSLSDVLVAIDTPFLTPLASP 180

Query: 181 PLKASPLCSLDSYKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEE 240
           PLK+     LD Y  H FNPLFESS+E E  LNR+RSSPPPKFKFLRDAEEKLYRRLMEE
Sbjct: 181 PLKSPTFNPLDCYSQHGFNPLFESSAESE--LNRLRSSPPPKFKFLRDAEEKLYRRLMEE 240

Query: 241 AQKRGE--------------------------------ILNTKNEQRK--------PSSS 266
           A+K G                                 I+  KN++R+         S+ 
Sbjct: 241 AEKSGIKNGGFVQDSGVKAPMNVISSMTPEERDGSFIRIIVGKNKERELHHHLPQYHSTP 300

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BLAST of CmoCh01G006170 vs. NCBI nr
Match: gi|645216935|ref|XP_008223342.1| (PREDICTED: uncharacterized protein LOC103323148 isoform X2 [Prunus mume])

HSP 1 Score: 236.1 bits (601), Expect = 7.3e-59
Identity = 141/245 (57.55%), Postives = 169/245 (68.98%), Query Frame = 1


Query: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGVQHDAYNKPRPL------- 60
           M SF+ L IGL L  G L L +VAELYYLLW   KRI    ++ D  N  + L       
Sbjct: 1   MTSFSGLGIGLSLVFGCLLLALVAELYYLLWWK-KRITNREIEEDYSNHAKELFQFSCWK 60

Query: 61  -PLIPSETNSTREITRNPLENRHGL--DLEFGSGEDLLLKTAAEDDEHDEAEEEDVELMA 120
            P      ++++E  R P  N      DLE GS +DLLLK   E++       E  ELM 
Sbjct: 61  KPSSLQTNSNSQENVREPDANHSSSESDLELGSSKDLLLKLNGEENV------EISELMR 120

Query: 121 IYNLAGQPRFLFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIAS 180
           ++NLAG PRFLFTI EET+EDLESED KSRGDRSRKGSR RSLSD+I +++TP+ +P+ S
Sbjct: 121 LHNLAGPPRFLFTINEETKEDLESEDGKSRGDRSRKGSRTRSLSDLILSVDTPYLSPLPS 180

Query: 181 PPLKASPLCSLDSYKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLME 236
           P LK+SPL SLDSYK H FNPLFESS+E E  L+R+RSSPPPKFKFLRDAEEKL+RRLME
Sbjct: 181 PSLKSSPLSSLDSYKHHGFNPLFESSTEAE--LSRLRSSPPPKFKFLRDAEEKLFRRLME 236

The following BLAST results are available for this feature:

BLAST of CmoCh01G006170 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh01G006170 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXD2_CUCSA	6.8e-80	65.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G505940 PE=4 SV=1	[more]
A5AT40_VITVI	3.9e-59	50.32	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006045 PE=4 SV=1	[more]
M5WLR5_PRUPE	1.5e-58	48.58	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019890mg PE=4 SV=1	[more]
A0A061H031_THECC	1.2e-57	49.68	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_041865 PE=4 SV=1	[more]
B9HPI8_POPTR	5.2e-56	47.45	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s03470g PE=4 SV=1	[more]

BLAST of CmoCh01G006170 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59350.1	6.2e-32	44.14	unknown protein	[more]
AT2G39560.1	7.3e-17	31.76	Putative membrane lipoprotein	[more]

BLAST of CmoCh01G006170 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115304\|ref\|XP_008457488.1\|	1.2e-80	64.69	PREDICTED: uncharacterized protein LOC103497168 [Cucumis melo]	[more]
gi\|449464934\|ref\|XP_004150184.1\|	9.8e-80	65.60	PREDICTED: uncharacterized protein LOC101218094 [Cucumis sativus]	[more]
gi\|1009115148\|ref\|XP_015874074.1\|	1.1e-59	49.23	PREDICTED: uncharacterized protein LOC107411078 [Ziziphus jujuba]	[more]
gi\|147810042\|emb\|CAN69364.1\|	5.6e-59	50.32	hypothetical protein VITISV_006045 [Vitis vinifera]	[more]
gi\|645216935\|ref\|XP_008223342.1\|	7.3e-59	57.55	PREDICTED: uncharacterized protein LOC103323148 isoform X2 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G006170.1	CmoCh01G006170.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34054	FAMILY NOT NAMED	coord: 2..271 score: 6.5
None	No IPR available	PANTHER	PTHR34054:SF2	SUBFAMILY NOT NAMED	coord: 2..271 score: 6.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G006170	Cucsa.213820	Cucumber (Gy14) v1	cgycmoB0617
CmoCh01G006170	CmaCh01G005930	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G006170	CmaCh20G004130	Cucurbita maxima (Rimu)	cmacmoB545
CmoCh01G006170	CmaCh02G008130	Cucurbita maxima (Rimu)	cmacmoB594
CmoCh01G006170	Cla013296	Watermelon (97103) v1	cmowmB449
CmoCh01G006170	Cla008251	Watermelon (97103) v1	cmowmB422
CmoCh01G006170	Csa1G505940	Cucumber (Chinese Long) v2	cmocuB416
CmoCh01G006170	MELO3C013692	Melon (DHL92) v3.5.1	cmomeB378
CmoCh01G006170	MELO3C020649	Melon (DHL92) v3.5.1	cmomeB382
CmoCh01G006170	ClCG02G020280	Watermelon (Charleston Gray)	cmowcgB397
CmoCh01G006170	ClCG03G001620	Watermelon (Charleston Gray)	cmowcgB403
CmoCh01G006170	CSPI06G14590	Wild cucumber (PI 183967)	cmocpiB481
CmoCh01G006170	CSPI01G22940	Wild cucumber (PI 183967)	cmocpiB420
CmoCh01G006170	Lsi10G013660	Bottle gourd (USVL1VR-Ls)	cmolsiB383
CmoCh01G006170	Cp4.1LG16g06110	Cucurbita pepo (Zucchini)	cmocpeB429
CmoCh01G006170	Cp4.1LG02g13340	Cucurbita pepo (Zucchini)	cmocpeB449
CmoCh01G006170	Cp4.1LG05g09130	Cucurbita pepo (Zucchini)	cmocpeB459
CmoCh01G006170	MELO3C013692.2	Melon (DHL92) v3.6.1	cmomedB435
CmoCh01G006170	MELO3C020649.2	Melon (DHL92) v3.6.1	cmomedB439
CmoCh01G006170	CsaV3_1G034060	Cucumber (Chinese Long) v3	cmocucB0500
CmoCh01G006170	CsaV3_6G016980	Cucumber (Chinese Long) v3	cmocucB0571
CmoCh01G006170	Cla97C03G052560	Watermelon (97103) v2	cmowmbB448
CmoCh01G006170	Cla97C02G046250	Watermelon (97103) v2	cmowmbB442
CmoCh01G006170	Bhi08G000544	Wax gourd	cmowgoB0590
CmoCh01G006170	Bhi10G000553	Wax gourd	cmowgoB0574
CmoCh01G006170	CsGy1G022420	Cucumber (Gy14) v2	cgybcmoB098
CmoCh01G006170	Carg03306	Silver-seed gourd	carcmoB0461
CmoCh01G006170	Carg20285	Silver-seed gourd	carcmoB0418
CmoCh01G006170	Carg20665	Silver-seed gourd	carcmoB0518

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh01G006170	CmoCh02G008160	Cucurbita moschata (Rifu)	cmocmoB357

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G006170	Cucumber (Chinese Long) v3	cmocucB0547
CmoCh01G006170	Cucumber (Chinese Long) v3	cmocucB0563
CmoCh01G006170	Watermelon (97103) v2	cmowmbB453
CmoCh01G006170	Watermelon (97103) v2	cmowmbB476
CmoCh01G006170	Cucurbita moschata (Rifu)	cmocmoB173
CmoCh01G006170	Cucurbita moschata (Rifu)	cmocmoB354
CmoCh01G006170	Cucurbita moschata (Rifu)	cmocmoB368
CmoCh01G006170	Cucumber (Gy14) v1	cgycmoB0469
CmoCh01G006170	Cucurbita maxima (Rimu)	cmacmoB226
CmoCh01G006170	Cucurbita pepo (Zucchini)	cmocpeB441
CmoCh01G006170	Bottle gourd (USVL1VR-Ls)	cmolsiB403
CmoCh01G006170	Cucumber (Gy14) v2	cgybcmoB483
CmoCh01G006170	Silver-seed gourd	carcmoB0596