CmoCh01G003780 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCAAATTTCCCAAGTCTCTGCTGATGTTAAAATACAGTCTTCAGCTGACAAATTCTATGCTTTCTTTAGGCACAAAATGCACCATTTGCCTCGAATATTCTCTAAGAATCTCCACTGTTGGATGATGGAAGTCCCACATCGACTAATTTAGGGTGTGATCATGGGTTTATAAGTGAGGAATACTAACTCCATTGGCATGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCCTCTAACATGGTATCAGAGCCATGCCCTAAACTTAGTCATGCCAATAGATTGGTAAATCCTCAAATATCAAACAAAGAACTCTTAAAGAAAAGGAGCTAAGCCCCTCCTCGAAGGCCGTCAAAAATGACTAAGACTCCAAAGGAGTCGAGCCTCGATTAAGGGGAGGCGCACTTTGTTCGAGGGGAGGTGTTGGATGATGGAAGTCCCACATCGACTAATTTAGGGTGTGATCATGGGTTTATAAGTGAGGAATACTAACTCCATTGGCATGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCCTCTAACATCCACAGCTTTGAATTCCTCGAAGGAAATGACATCTCTCCTGGCTCCCTCATGCACTGGTCTTACGACATTGGTACGACTCCGTTCGGTTTTGTGTTTTTGTTTTTGAAAATTAAGCTTAATACTCGTTTGTTTCTTTGTTCGGTTAGTTGGGCCGGCTAAAATGAAGGCAAAAGTGGCAGATGTCGATGAAGAAAACAAGTCGATCACGTACGAAGTTGTTGAAGGAGACATATTGAGCCAATACACCTTATTTAGGTCGAAGTTCCGAGCCTACGACGACGTAGAAAACGGAGGCGCCATCGTGAATTGGTCGTTCGAGTTCGAGAAAGCCAACGAGAACATCCCGTCCCCTGAAGCTTACCTGGAATTTGTTTCTAAGATCTCAATTGGACTTGATGCTTACCTTGCTGTTAACTGA ATGGCTCAAATTTCCCAAGTCTCTGCTGATGTTAAAATACACTTAATACTCGTTTGTTTCTTTGTTCGGTTAGTTGGGCCGGCTAAAATGAAGGCAAAAGTGGCAGATGTCGATGAAGAAAACAAGTCGATCACGTACGAAGTTGTTGAAGGAGACATATTGAGCCAATACACCTTATTTAGGTCGAAGTTCCGAGCCTACGACGACGTAGAAAACGGAGGCGCCATCGTGAATTGGTCGTTCGAGTTCGAGAAAGCCAACGAGAACATCCCGTCCCCTGAAGCTTACCTGGAATTTGTTTCTAAGATCTCAATTGGACTTGATGCTTACCTTGCTGTTAACTGA ATGGCTCAAATTTCCCAAGTCTCTGCTGATGTTAAAATACACTTAATACTCGTTTGTTTCTTTGTTCGGTTAGTTGGGCCGGCTAAAATGAAGGCAAAAGTGGCAGATGTCGATGAAGAAAACAAGTCGATCACGTACGAAGTTGTTGAAGGAGACATATTGAGCCAATACACCTTATTTAGGTCGAAGTTCCGAGCCTACGACGACGTAGAAAACGGAGGCGCCATCGTGAATTGGTCGTTCGAGTTCGAGAAAGCCAACGAGAACATCCCGTCCCCTGAAGCTTACCTGGAATTTGTTTCTAAGATCTCAATTGGACTTGATGCTTACCTTGCTGTTAACTGA
BLAST of CmoCh01G003780 vs. Swiss-Prot
Match: MLP34_ARATH (MLP-like protein 34 OS=Arabidopsis thaliana GN=MLP34 PE=2 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 3.4e-10 Identity = 31/87 (35.63%), Postives = 50/87 (57.47%), Query Frame = 1
BLAST of CmoCh01G003780 vs. Swiss-Prot
Match: MLP43_ARATH (MLP-like protein 43 OS=Arabidopsis thaliana GN=MLP43 PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.1e-08 Identity = 28/81 (34.57%), Postives = 46/81 (56.79%), Query Frame = 1
BLAST of CmoCh01G003780 vs. Swiss-Prot
Match: MLP31_ARATH (MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP31 PE=2 SV=2) HSP 1 Score: 59.7 bits (143), Expect = 2.4e-08 Identity = 28/87 (32.18%), Postives = 50/87 (57.47%), Query Frame = 1
BLAST of CmoCh01G003780 vs. Swiss-Prot
Match: MLP28_ARATH (MLP-like protein 28 OS=Arabidopsis thaliana GN=MLP28 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.1e-08 Identity = 28/87 (32.18%), Postives = 49/87 (56.32%), Query Frame = 1
BLAST of CmoCh01G003780 vs. Swiss-Prot
Match: KIRO_ACTDE (Kirola OS=Actinidia deliciosa PE=1 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.3e-06 Identity = 29/95 (30.53%), Postives = 49/95 (51.58%), Query Frame = 1
BLAST of CmoCh01G003780 vs. TrEMBL
Match: A0A0A0LAX1_CUCSA (Major latex protein OS=Cucumis sativus GN=Csa_3G319290 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 5.9e-30 Identity = 65/91 (71.43%), Postives = 78/91 (85.71%), Query Frame = 1
BLAST of CmoCh01G003780 vs. TrEMBL
Match: A0A0A0LA34_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G342860 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 8.3e-16 Identity = 44/93 (47.31%), Postives = 59/93 (63.44%), Query Frame = 1
BLAST of CmoCh01G003780 vs. TrEMBL
Match: A0A0A0L9D7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G219190 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 6.6e-13 Identity = 40/101 (39.60%), Postives = 63/101 (62.38%), Query Frame = 1
BLAST of CmoCh01G003780 vs. TrEMBL
Match: A0A0A0LCM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G333840 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 8.6e-13 Identity = 41/88 (46.59%), Postives = 60/88 (68.18%), Query Frame = 1
BLAST of CmoCh01G003780 vs. TrEMBL
Match: A0A0A0L7P3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G334350 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 7.3e-12 Identity = 38/86 (44.19%), Postives = 56/86 (65.12%), Query Frame = 1
BLAST of CmoCh01G003780 vs. TAIR10
Match: AT1G70880.1 (AT1G70880.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 70.9 bits (172), Expect = 5.9e-13 Identity = 33/87 (37.93%), Postives = 51/87 (58.62%), Query Frame = 1
BLAST of CmoCh01G003780 vs. TAIR10
Match: AT1G70850.1 (AT1G70850.1 MLP-like protein 34) HSP 1 Score: 65.9 bits (159), Expect = 1.9e-11 Identity = 31/87 (35.63%), Postives = 50/87 (57.47%), Query Frame = 1
BLAST of CmoCh01G003780 vs. TAIR10
Match: AT5G28010.1 (AT5G28010.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 61.6 bits (148), Expect = 3.6e-10 Identity = 29/87 (33.33%), Postives = 51/87 (58.62%), Query Frame = 1
BLAST of CmoCh01G003780 vs. TAIR10
Match: AT1G70890.1 (AT1G70890.1 MLP-like protein 43) HSP 1 Score: 60.8 bits (146), Expect = 6.1e-10 Identity = 28/81 (34.57%), Postives = 46/81 (56.79%), Query Frame = 1
BLAST of CmoCh01G003780 vs. TAIR10
Match: AT1G70840.1 (AT1G70840.1 MLP-like protein 31) HSP 1 Score: 59.7 bits (143), Expect = 1.4e-09 Identity = 28/87 (32.18%), Postives = 50/87 (57.47%), Query Frame = 1
BLAST of CmoCh01G003780 vs. NCBI nr
Match: gi|449456190|ref|XP_004145833.1| (PREDICTED: MLP-like protein 31 [Cucumis sativus]) HSP 1 Score: 138.3 bits (347), Expect = 8.5e-30 Identity = 65/91 (71.43%), Postives = 78/91 (85.71%), Query Frame = 1
BLAST of CmoCh01G003780 vs. NCBI nr
Match: gi|659114434|ref|XP_008457052.1| (PREDICTED: major latex protein 149-like [Cucumis melo]) HSP 1 Score: 127.1 bits (318), Expect = 2.0e-26 Identity = 64/92 (69.57%), Postives = 73/92 (79.35%), Query Frame = 1
BLAST of CmoCh01G003780 vs. NCBI nr
Match: gi|449464144|ref|XP_004149789.1| (PREDICTED: MLP-like protein 34 [Cucumis sativus]) HSP 1 Score: 91.3 bits (225), Expect = 1.2e-15 Identity = 44/93 (47.31%), Postives = 59/93 (63.44%), Query Frame = 1
BLAST of CmoCh01G003780 vs. NCBI nr
Match: gi|659114461|ref|XP_008457062.1| (PREDICTED: MLP-like protein 423 [Cucumis melo]) HSP 1 Score: 91.3 bits (225), Expect = 1.2e-15 Identity = 44/93 (47.31%), Postives = 60/93 (64.52%), Query Frame = 1
BLAST of CmoCh01G003780 vs. NCBI nr
Match: gi|470113654|ref|XP_004293036.1| (PREDICTED: major latex protein 146-like [Fragaria vesca subsp. vesca]) HSP 1 Score: 90.5 bits (223), Expect = 2.0e-15 Identity = 44/87 (50.57%), Postives = 57/87 (65.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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