CmoCh01G000150 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TATAGAAGCCAAAGGGAAGGAACGCCACTAACCACTCATTCCAATCAATCATTTAACCGGAAGACTTTTGTTACTCCCATCTTCTTCATCTTCATTATAAACCAATGGCCTCTGAGCTCCTTCTTCCACTTCTCACAGAGGGACATATAATTCATAATTAATTCAATATGAGTTTCCTCCACAAGCTTTGGGACGAAACCCTCGCTGGTCCCGCGCCGGATTCCGGCCTCAGTCGCCTCCGCAAGTACAACTCCTTCTCCGCCTCCCGATCTCCGCCTATGCTAACCAACGACCGCGCCTCCAACATTCCTCGTCGTATCGAGATCCCTAGCCCTACTCTCTCTCAGAACTCATCCACCACCACCACTCCACCGCCCACTCGTAAGTACTTCATTTCTTCTGTTTAAATCCCGTCTCTTGATTTTGATCGGGTCGTTATTGGTGTTGAATCATGCAGCGCCGGAGACGCCGCGAGGGGACGATATGAATAGACTGGCCAGGAGAAGAACCATTGATTATCCTCGCCGTCGCCCTTTGGAAGGATCTGACCCAACCAGCACCCCTTCTGTTTATGATTGGTTAGTTTTTTTCCACCACTTTTCATAAATAAACTTAGTAATTATTTTGTTTGACAAATTATTATTTATTCCCTAAATTTTGCTCTCAAAAACCCTTTTGACTTTTAAAAGTAATAATACACTTCAACTTTCAAATAAAAAAAATCAAAATACTATTTCTATTGGAGCATACAAGTTTAGGGTTCAAAATTTAATTTGAAGCGAAATAAATGGGTTAATTAAGAGAATTATACAAAATTAATTGCTAAGAATTATACAATATTTGGTTATCCTCCCATCCATTGAAGTAGTATAGATATTATGTAGATGTAATATTATGATATTTAGTGATAATTTTACGGTGAGATAATTGTGTTTTATAATTATATAGGATCGTTATAACTGCTTTAGATCGTTGA TATAGAAGCCAAAGGGAAGGAACGCCACTAACCACTCATTCCAATCAATCATTTAACCGGAAGACTTTTGTTACTCCCATCTTCTTCATCTTCATTATAAACCAATGGCCTCTGAGCTCCTTCTTCCACTTCTCACAGAGGGACATATAATTCATAATTAATTCAATATGAGTTTCCTCCACAAGCTTTGGGACGAAACCCTCGCTGGTCCCGCGCCGGATTCCGGCCTCAGTCGCCTCCGCAAGTACAACTCCTTCTCCGCCTCCCGATCTCCGCCTATGCTAACCAACGACCGCGCCTCCAACATTCCTCGTCGTATCGAGATCCCTAGCCCTACTCTCTCTCAGAACTCATCCACCACCACCACTCCACCGCCCACTCCGCCGGAGACGCCGCGAGGGGACGATATGAATAGACTGGCCAGGAGAAGAACCATTGATTATCCTCGCCGTCGCCCTTTGGAAGGATCTGACCCAACCAGCACCCCTTCTGTTTATGATTGGATCGTTATAACTGCTTTAGATCGTTGA ATGAGTTTCCTCCACAAGCTTTGGGACGAAACCCTCGCTGGTCCCGCGCCGGATTCCGGCCTCAGTCGCCTCCGCAAGTACAACTCCTTCTCCGCCTCCCGATCTCCGCCTATGCTAACCAACGACCGCGCCTCCAACATTCCTCGTCGTATCGAGATCCCTAGCCCTACTCTCTCTCAGAACTCATCCACCACCACCACTCCACCGCCCACTCCGCCGGAGACGCCGCGAGGGGACGATATGAATAGACTGGCCAGGAGAAGAACCATTGATTATCCTCGCCGTCGCCCTTTGGAAGGATCTGACCCAACCAGCACCCCTTCTGTTTATGATTGGATCGTTATAACTGCTTTAGATCGTTGA
BLAST of CmoCh01G000150 vs. Swiss-Prot
Match: DRMH4_ARATH (Dormancy-associated protein homolog 4 OS=Arabidopsis thaliana GN=At1g54070 PE=3 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 8.4e-12 Identity = 50/135 (37.04%), Postives = 70/135 (51.85%), Query Frame = 1
BLAST of CmoCh01G000150 vs. TrEMBL
Match: A0A0A0L9F5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G646010 PE=4 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 5.1e-40 Identity = 98/139 (70.50%), Postives = 105/139 (75.54%), Query Frame = 1
BLAST of CmoCh01G000150 vs. TrEMBL
Match: B9GXQ9_POPTR (Dormancy/auxin associated family protein OS=Populus trichocarpa GN=POPTR_0003s06820g PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.3e-14 Identity = 62/142 (43.66%), Postives = 74/142 (52.11%), Query Frame = 1
BLAST of CmoCh01G000150 vs. TrEMBL
Match: A0A061GBU9_THECC (Dormancy/auxin associated family protein, putative OS=Theobroma cacao GN=TCM_029211 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 2.2e-14 Identity = 57/134 (42.54%), Postives = 78/134 (58.21%), Query Frame = 1
BLAST of CmoCh01G000150 vs. TrEMBL
Match: I1KHG1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G043000 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 3.7e-14 Identity = 56/131 (42.75%), Postives = 77/131 (58.78%), Query Frame = 1
BLAST of CmoCh01G000150 vs. TrEMBL
Match: D7TZM6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g00700 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 4.8e-14 Identity = 56/133 (42.11%), Postives = 74/133 (55.64%), Query Frame = 1
BLAST of CmoCh01G000150 vs. TAIR10
Match: AT1G54070.1 (AT1G54070.1 Dormancy/auxin associated family protein) HSP 1 Score: 71.2 bits (173), Expect = 4.8e-13 Identity = 50/135 (37.04%), Postives = 70/135 (51.85%), Query Frame = 1
BLAST of CmoCh01G000150 vs. NCBI nr
Match: gi|700203330|gb|KGN58463.1| (hypothetical protein Csa_3G646010 [Cucumis sativus]) HSP 1 Score: 171.8 bits (434), Expect = 7.3e-40 Identity = 98/139 (70.50%), Postives = 105/139 (75.54%), Query Frame = 1
BLAST of CmoCh01G000150 vs. NCBI nr
Match: gi|659120743|ref|XP_008460332.1| (PREDICTED: auxin-repressed 12.5 kDa protein-like [Cucumis melo]) HSP 1 Score: 162.9 bits (411), Expect = 3.4e-37 Identity = 95/139 (68.35%), Postives = 102/139 (73.38%), Query Frame = 1
BLAST of CmoCh01G000150 vs. NCBI nr
Match: gi|1009111680|ref|XP_015902145.1| (PREDICTED: auxin-repressed 12.5 kDa protein isoform X1 [Ziziphus jujuba]) HSP 1 Score: 92.0 bits (227), Expect = 7.4e-16 Identity = 58/132 (43.94%), Postives = 74/132 (56.06%), Query Frame = 1
BLAST of CmoCh01G000150 vs. NCBI nr
Match: gi|743881581|ref|XP_011036509.1| (PREDICTED: auxin-repressed 12.5 kDa protein-like isoform X2 [Populus euphratica]) HSP 1 Score: 89.4 bits (220), Expect = 4.8e-15 Identity = 57/137 (41.61%), Postives = 74/137 (54.01%), Query Frame = 1
BLAST of CmoCh01G000150 vs. NCBI nr
Match: gi|720018273|ref|XP_010261733.1| (PREDICTED: auxin-repressed 12.5 kDa protein [Nelumbo nucifera]) HSP 1 Score: 88.6 bits (218), Expect = 8.2e-15 Identity = 56/131 (42.75%), Postives = 80/131 (61.07%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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