CmaCh20G009990 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh20G009990
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionATP synthase subunit a, chloroplastic
LocationCma_Chr20 : 6071479 .. 6073850 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCGTAATCCACAAACCATTCCTACTGACGGTCAGAATTTCTTCGAATATGTCCTTGAATTCATTCGAGACGTGAGCAAAACCCAAATTGGCGAAGAATATGGTCCGTGGGTTCCCTTTATTGGAACTATGTTTCTATTTATTTTTGTTTCGAATTGGTCAGGGGCTCTTTTACCTTGGAAAATCATACAGTTACCTCACGGAGAGTTAGCCGCACCCACAAACGATATAAATACTACTGTTGCTTTAGCTTTACTCACATCAGTAGCATATTTCTATGCGGGTCTTAGCAAAAAAGGATTAAGTTATTTCGGTAAATACATTCAACCAACTCCAATCCTTTTACCCATTAACATCTTAGAAGATTTCACAAAACCCTTATCACTTAGTTTTCGACTTTTCGGAAATATATTAGCTGATGAATTAGTAGTTGTTGTTCTTGTTTCTTTAGTACCTTTAGTAGTTCCTATACCTGTTATGTTCCTTGGATTATTTACAAGTGGTATTCAAGCTCTTATTTTTGCAACTTTAGCTGCGGCTTATATAGGCGAATCCATGGAGGGTCANGGGGCTCTTTTACCTTGGAAAATCATACAGTTACCTCACGGAGAGTTAGCCGCACCCACAAATGATACATTATTTTTCCACCTTGTTCTTGTTGTCCTCTTGAAGATCATATTTAGATCTTGGAAAAAAAAAATCCTTATCATATTGTTCTTAATATTGTATTTATAAATCCTTATCATTAGACCATTTACACGTTTATTTGAAGATCAAATAAATTTCAATTCTCATTTTTTCGTAAAGCATATAAATCTGAAATTGTTGTGTTTGATATTTTTCTTTCATCATTTAAGCCCGAAGATAAATTCTAAATTTTTTCGAATTCTGTAAAAAGAAAAGTTAGATCGTTCTCAAATCTTCACGACCATTCTGTTTGGAATTCATTTTGTTCCGTGTGCTATTATATCAAAAAAATATCTTTGTCCCTTGTTTATTTGTTCATTTCTTGTTTTATTGTGTTGTTACTACATAATTACCTTGTCTTGATTGTCTTAAATAGCTCGCTACTATCAAATATTGATTTATCTATATTATCTACCTTGATCATAAATTAGCCACTTTCCCAAATAGCCTACCTTTGTGTGTTAAACACGAGTATTCCTGAGTGTAAAATCAGTGAGTTGAGTGTGTGAGGTCCTAAGCATATATAACTATTGTTTGTACAAATCATGAACCAAGACGAAGAAAATGGAGGGGAGATCAATGATCTAGTTGAAGAAGCCCAAAAGAATGAGGAGGAACTAAAAGATGGGATTCATTTGGCACTTATTACAAGAAGAATTCTTAAAACTCAAGTTACGGAAAATGATGTGATGATCAAAGAGACAAATTGTTTCACACACGGTGTTTAGTCAAGGGGGCTGCTTGTAGTCTTATCATTGATAGTGGAAGTTGCACCAATGTTGTAAGTACCATGTTGATCAAAAGGTTGCAAATTCCAACCCAAGATCATCTTGAACCTTACAAGCTCCAATGTCTCAATGATAGTGGAGCAATGAAGGTAGTTTCCCAAGGTTTAATATCTTTTACTTTGGAAAAATATAAAGATGAAGTTTTTTGGGATGTGTTACCAAGCAAGTTGGAGATATATTGCTTGGCCGACCATGACAATTTGATAGGAGGGTTATGTATGATGACTATTTGAATAGGTATACTTTTGTAAAAGATGGTAGAAAAACCACTCTTGTACCTTTGAGTTCTGCAAATGTACTTGTTGATCGATTAAAGTTGGAGAAAAAAAAGAAAGAGTTTGAGGAAAAAAAGTTGAAAGAAAAAATAGAGAAAAATCAAAGAGAAAAAAACAGTGAAAAGAAGAATGAAAAAAAGACGAAGTTGAAGTTAGAAAGAAGGAGAGTTGTTCGGCTAGAGTTGGAGAGGTCAAGAGGTTTTCATAAAAATCAATCTTTGTACATCTGTATAAGGAAGGATATTTGGTGTTTAACAATAACAATTTGTCTTTTACTAGTGTGTTTTAATCTCTTTTACAGGAATTAAAAAAAAAACATTATTTATGATGTTCAAGCTCTAAAATGCTCTCTACCGATTAAAAACATTATCATAGATAATGTACAAGCTCTAAAATGCTCTCTACCGATTAAAACAAGCACTTAAGGCTTGCTTTAGTTGAATAGAGTCTTATTTCAAAAAAAAAAAATATATCAAAAATAATTTGAGTGAGCAGATACTCTTTGTTAATAGAAACGAAGGGAGGTAAATTTCTTATAATAAGCATCTATGTTATTGATTTTCTTTTTACCATTTAAATATTAGAAGAGAAAGAATTTGATATGACTGACTTAGGTCAGATA

mRNA sequence

GTTCGTAATCCACAAACCATTCCTACTGACGGTCAGAATTTCTTCGAATATGTCCTTGAATTCATTCGAGACGTGAGCAAAACCCAAATTGGCGAAGAATATGGTCCGTGGGTTCCCTTTATTGGAACTATGTTTCTATTTATTTTTGTTTCGAATTGGTCAGGGGCTCTTTTACCTTGGAAAATCATACAGTTACCTCACGGAGAGTTAGCCGCACCCACAAACGATATAAATACTACTGTTGCTTTAGCTTTACTCACATCAGTAGCATATTTCTATGCGGGTCTTAGCAAAAAAGGATTAAGTTATTTCGGTAAATACATTCAACCAACTCCAATCCTTTTACCCATTAACATCTTAGAAGATTTCACAAAACCCTTATCACTTAGTTTTCGACTTTTCGGAAATATATTAGCTGATGAATTAGTAGTTGTTGTTCTTGTTTCTTTAGTACCTTTAGTAGTTCCTATACCTGTTATGTTCCTTGGATTATTTACAAGTGGTATTCAAGCTCTTATTTTTGCAACTTTAGCTGCGGCTTATATAGGCGAATCCATGGAGGAAGAGAAAGAATTTGATATGACTGACTTAGGTCAGATA

Coding sequence (CDS)

GTTCGTAATCCACAAACCATTCCTACTGACGGTCAGAATTTCTTCGAATATGTCCTTGAATTCATTCGAGACGTGAGCAAAACCCAAATTGGCGAAGAATATGGTCCGTGGGTTCCCTTTATTGGAACTATGTTTCTATTTATTTTTGTTTCGAATTGGTCAGGGGCTCTTTTACCTTGGAAAATCATACAGTTACCTCACGGAGAGTTAGCCGCACCCACAAACGATATAAATACTACTGTTGCTTTAGCTTTACTCACATCAGTAGCATATTTCTATGCGGGTCTTAGCAAAAAAGGATTAAGTTATTTCGGTAAATACATTCAACCAACTCCAATCCTTTTACCCATTAACATCTTAGAAGATTTCACAAAACCCTTATCACTTAGTTTTCGACTTTTCGGAAATATATTAGCTGATGAATTAGTAGTTGTTGTTCTTGTTTCTTTAGTACCTTTAGTAGTTCCTATACCTGTTATGTTCCTTGGATTATTTACAAGTGGTATTCAAGCTCTTATTTTTGCAACTTTAGCTGCGGCTTATATAGGCGAATCCATGGAGGAAGAGAAAGAATTTGATATGACTGACTTAGGTCAGATA

Protein sequence

VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEEEKEFDMTDLGQI
Homology
[Close]
BLAST of CmaCh20G009990 vs. Swiss-Prot
Match: ATPI_CUCSA (ATP synthase subunit a, chloroplastic OS=Cucumis sativus GN=atpI PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 1.6e-100
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1 

Query: 1   VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 60
           VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW
Sbjct: 58  VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 117

Query: 61  KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL 120
           KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL
Sbjct: 118 KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL 177

Query: 121 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 180
           EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA
Sbjct: 178 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 237

Query: 181 YIGESME 188
           YIGESME
Sbjct: 238 YIGESME 244

[Close]
BLAST of CmaCh20G009990 vs. Swiss-Prot
Match: ATPI_MORIN (ATP synthase subunit a, chloroplastic OS=Morus indica GN=atpI PE=3 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 2.3e-99
Identity = 184/187 (98.40%), Postives = 186/187 (99.47%), Query Frame = 1 

Query: 1   VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 60
           VRNPQTIPTDGQNFFEYVLEFIRDVS+TQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW
Sbjct: 58  VRNPQTIPTDGQNFFEYVLEFIRDVSRTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 117

Query: 61  KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL 120
           KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGL+KKGL YFGKYIQPTPILLPINIL
Sbjct: 118 KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLTKKGLGYFGKYIQPTPILLPINIL 177

Query: 121 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 180
           EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA
Sbjct: 178 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 237

Query: 181 YIGESME 188
           YIGESME
Sbjct: 238 YIGESME 244

[Close]
BLAST of CmaCh20G009990 vs. Swiss-Prot
Match: ATPI_LEMMI (ATP synthase subunit a, chloroplastic OS=Lemna minor GN=atpI PE=3 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 3.1e-99
Identity = 184/187 (98.40%), Postives = 186/187 (99.47%), Query Frame = 1 

Query: 1   VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 60
           VRNPQTIP DGQNFFEY+LEFIRD+SKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW
Sbjct: 58  VRNPQTIPADGQNFFEYLLEFIRDLSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 117

Query: 61  KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL 120
           KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL
Sbjct: 118 KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL 177

Query: 121 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 180
           EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA
Sbjct: 178 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 237

Query: 181 YIGESME 188
           YIGESME
Sbjct: 238 YIGESME 244

[Close]
BLAST of CmaCh20G009990 vs. Swiss-Prot
Match: ATPI_DAUCA (ATP synthase subunit a, chloroplastic OS=Daucus carota GN=atpI PE=3 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 4.0e-99
Identity = 184/187 (98.40%), Postives = 185/187 (98.93%), Query Frame = 1 

Query: 1   VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 60
           VRNPQTIPT GQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW
Sbjct: 58  VRNPQTIPTSGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 117

Query: 61  KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL 120
           KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAG+SKKGL YFGKYIQPTPILLPINIL
Sbjct: 118 KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGISKKGLGYFGKYIQPTPILLPINIL 177

Query: 121 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 180
           EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA
Sbjct: 178 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 237

Query: 181 YIGESME 188
           YIGESME
Sbjct: 238 YIGESME 244

[Close]
BLAST of CmaCh20G009990 vs. Swiss-Prot
Match: ATPI_HELAN (ATP synthase subunit a, chloroplastic OS=Helianthus annuus GN=atpI PE=3 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 1.2e-98
Identity = 184/187 (98.40%), Postives = 185/187 (98.93%), Query Frame = 1 

Query: 1   VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 60
           VRNPQTIPT GQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW
Sbjct: 58  VRNPQTIPTGGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 117

Query: 61  KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL 120
           KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGL+KKGLSYFGKYIQPTPILLPINIL
Sbjct: 118 KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLTKKGLSYFGKYIQPTPILLPINIL 177

Query: 121 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 180
           EDFTKPLSLSFRLFGNILADELVVVVLVSLVP VVPIPVMFLGLFTSGIQALIFATLAAA
Sbjct: 178 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAA 237

Query: 181 YIGESME 188
           YIGESME
Sbjct: 238 YIGESME 244

[Close]
BLAST of CmaCh20G009990 vs. TrEMBL
Match: A0A067YQ78_ROSGI (ATP synthase subunit a, chloroplastic OS=Rosa gigantea GN=atpI PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 1.8e-98
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1 

Query: 1   VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 60
           VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW
Sbjct: 58  VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 117

Query: 61  KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL 120
           KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL
Sbjct: 118 KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL 177

Query: 121 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 180
           EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA
Sbjct: 178 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 237

Query: 181 YIGESME 188
           YIGESME
Sbjct: 238 YIGESME 244

[Close]
BLAST of CmaCh20G009990 vs. TrEMBL
Match: A0A0S2IER4_9ROSI (AtpI OS=Cucurbita foetidissima GN=atpI PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 1.8e-98
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1 

Query: 1   VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 60
           VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW
Sbjct: 58  VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 117

Query: 61  KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL 120
           KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL
Sbjct: 118 KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL 177

Query: 121 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 180
           EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA
Sbjct: 178 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 237

Query: 181 YIGESME 188
           YIGESME
Sbjct: 238 YIGESME 244

[Close]
BLAST of CmaCh20G009990 vs. TrEMBL
Match: W8E1Z1_9ROSI (ATP synthase CF0 subunit IV OS=Cucumis hystrix GN=atpI PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 1.8e-98
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1 

Query: 1   VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 60
           VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW
Sbjct: 58  VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 117

Query: 61  KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL 120
           KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL
Sbjct: 118 KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL 177

Query: 121 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 180
           EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA
Sbjct: 178 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 237

Query: 181 YIGESME 188
           YIGESME
Sbjct: 238 YIGESME 244

[Close]
BLAST of CmaCh20G009990 vs. TrEMBL
Match: A0A0S2IFC6_9ROSI (AtpI OS=Cucurbita lundelliana GN=atpI PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 1.8e-98
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1 

Query: 1   VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 60
           VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW
Sbjct: 58  VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 117

Query: 61  KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL 120
           KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL
Sbjct: 118 KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL 177

Query: 121 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 180
           EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA
Sbjct: 178 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 237

Query: 181 YIGESME 188
           YIGESME
Sbjct: 238 YIGESME 244

[Close]
BLAST of CmaCh20G009990 vs. TrEMBL
Match: A0A0S2IFL8_9ROSI (AtpI OS=Cucurbita okeechobeensis subsp. martinezii GN=atpI PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 1.8e-98
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1 

Query: 1   VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 60
           VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW
Sbjct: 58  VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 117

Query: 61  KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL 120
           KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL
Sbjct: 118 KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL 177

Query: 121 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 180
           EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA
Sbjct: 178 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 237

Query: 181 YIGESME 188
           YIGESME
Sbjct: 238 YIGESME 244

[Close]
BLAST of CmaCh20G009990 vs. TAIR10
Match: ATCG00150.1 (ATCG00150.1 ATPase, F0 complex, subunit A protein)

HSP 1 Score: 356.7 bits (914), Expect = 9.4e-99
Identity = 181/187 (96.79%), Postives = 184/187 (98.40%), Query Frame = 1 

Query: 1   VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 60
           +RNPQTIPTDGQNFFE+VLEFIRDVSKTQIGEEYGPWVPFIGT+FLFIFVSNWSGALLPW
Sbjct: 60  IRNPQTIPTDGQNFFEFVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPW 119

Query: 61  KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL 120
           KIIQLP GELAAPTNDINTTVALALLTSVAYFYAGLSKKGL YF KYIQPTPILLPINIL
Sbjct: 120 KIIQLPQGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFSKYIQPTPILLPINIL 179

Query: 121 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 180
           EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA
Sbjct: 180 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 239

Query: 181 YIGESME 188
           YIGESME
Sbjct: 240 YIGESME 246

[Close]
BLAST of CmaCh20G009990 vs. NCBI nr
Match: gi|573015448|gb|AHF72027.1| (ATP synthase CF0 A chain (chloroplast) [Rosa odorata var. gigantea])

HSP 1 Score: 366.7 bits (940), Expect = 2.6e-98
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1 

Query: 1   VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 60
           VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW
Sbjct: 58  VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 117

Query: 61  KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL 120
           KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL
Sbjct: 118 KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL 177

Query: 121 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 180
           EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA
Sbjct: 178 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 237

Query: 181 YIGESME 188
           YIGESME
Sbjct: 238 YIGESME 244

[Close]
BLAST of CmaCh20G009990 vs. NCBI nr
Match: gi|68164791|ref|YP_247587.1| (ATP synthase CF0 A subunit [Cucumis sativus])

HSP 1 Score: 366.7 bits (940), Expect = 2.6e-98
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1 

Query: 1   VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 60
           VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW
Sbjct: 58  VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 117

Query: 61  KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL 120
           KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL
Sbjct: 118 KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL 177

Query: 121 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 180
           EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA
Sbjct: 178 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 237

Query: 181 YIGESME 188
           YIGESME
Sbjct: 238 YIGESME 244

[Close]
BLAST of CmaCh20G009990 vs. NCBI nr
Match: gi|290490286|gb|ADD31550.1| (ATP synthase CF0 subunit IV protein (chloroplast) [Rhododendron simsii])

HSP 1 Score: 365.5 bits (937), Expect = 5.8e-98
Identity = 186/187 (99.47%), Postives = 187/187 (100.00%), Query Frame = 1 

Query: 1   VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 60
           VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW
Sbjct: 58  VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 117

Query: 61  KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL 120
           KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGL+YFGKYIQPTPILLPINIL
Sbjct: 118 KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLAYFGKYIQPTPILLPINIL 177

Query: 121 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 180
           EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA
Sbjct: 178 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 237

Query: 181 YIGESME 188
           YIGESME
Sbjct: 238 YIGESME 244

[Close]
BLAST of CmaCh20G009990 vs. NCBI nr
Match: gi|984910701|gb|AMC30802.1| (ATP synthase CF0 A subunit (chloroplast) [Senna marilandica])

HSP 1 Score: 365.2 bits (936), Expect = 7.5e-98
Identity = 186/187 (99.47%), Postives = 186/187 (99.47%), Query Frame = 1 

Query: 1   VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 60
           VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW
Sbjct: 61  VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 120

Query: 61  KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL 120
           KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGL YFGKYIQPTPILLPINIL
Sbjct: 121 KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFGKYIQPTPILLPINIL 180

Query: 121 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 180
           EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA
Sbjct: 181 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 240

Query: 181 YIGESME 188
           YIGESME
Sbjct: 241 YIGESME 247

[Close]
BLAST of CmaCh20G009990 vs. NCBI nr
Match: gi|748992543|gb|AJE72964.1| (ATP synthase CF0 A subunit (plastid) [Desmanthus illinoensis])

HSP 1 Score: 365.2 bits (936), Expect = 7.5e-98
Identity = 186/187 (99.47%), Postives = 186/187 (99.47%), Query Frame = 1 

Query: 1   VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 60
           VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW
Sbjct: 58  VRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPW 117

Query: 61  KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINIL 120
           KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGL YFGKYIQPTPILLPINIL
Sbjct: 118 KIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFGKYIQPTPILLPINIL 177

Query: 121 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 180
           EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA
Sbjct: 178 EDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAA 237

Query: 181 YIGESME 188
           YIGESME
Sbjct: 238 YIGESME 244

The following BLAST results are available for this feature:
BLAST of CmaCh20G009990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATPI_CUCSA1.6e-100100.00ATP synthase subunit a, chloroplastic OS=Cucumis sativus GN=atpI PE=3 SV=1[more]
ATPI_MORIN2.3e-9998.40ATP synthase subunit a, chloroplastic OS=Morus indica GN=atpI PE=3 SV=1[more]
ATPI_LEMMI3.1e-9998.40ATP synthase subunit a, chloroplastic OS=Lemna minor GN=atpI PE=3 SV=1[more]
ATPI_DAUCA4.0e-9998.40ATP synthase subunit a, chloroplastic OS=Daucus carota GN=atpI PE=3 SV=1[more]
ATPI_HELAN1.2e-9898.40ATP synthase subunit a, chloroplastic OS=Helianthus annuus GN=atpI PE=3 SV=1[more]
BLAST of CmaCh20G009990 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A067YQ78_ROSGI1.8e-98100.00ATP synthase subunit a, chloroplastic OS=Rosa gigantea GN=atpI PE=3 SV=1[more]
A0A0S2IER4_9ROSI1.8e-98100.00AtpI OS=Cucurbita foetidissima GN=atpI PE=3 SV=1[more]
W8E1Z1_9ROSI1.8e-98100.00ATP synthase CF0 subunit IV OS=Cucumis hystrix GN=atpI PE=3 SV=1[more]
A0A0S2IFC6_9ROSI1.8e-98100.00AtpI OS=Cucurbita lundelliana GN=atpI PE=3 SV=1[more]
A0A0S2IFL8_9ROSI1.8e-98100.00AtpI OS=Cucurbita okeechobeensis subsp. martinezii GN=atpI PE=3 SV=1[more]
BLAST of CmaCh20G009990 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00150.19.4e-9996.79ATCG00150.1 ATPase, F0 complex, subunit A protein[more]
BLAST of CmaCh20G009990 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|573015448|gb|AHF72027.1|2.6e-98100.00ATP synthase CF0 A chain (chloroplast) [Rosa odorata var. gigantea][more]
gi|68164791|ref|YP_247587.1|2.6e-98100.00ATP synthase CF0 A subunit [Cucumis sativus][more]
gi|290490286|gb|ADD31550.1|5.8e-9899.47ATP synthase CF0 subunit IV protein (chloroplast) [Rhododendron simsii][more]
gi|984910701|gb|AMC30802.1|7.5e-9899.47ATP synthase CF0 A subunit (chloroplast) [Senna marilandica][more]
gi|748992543|gb|AJE72964.1|7.5e-9899.47ATP synthase CF0 A subunit (plastid) [Desmanthus illinoensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000568ATP_synth_F0_asu
IPR023011ATP_synth_F0_asu_AS
Vocabulary: Molecular Function
TermDefinition
GO:0015078hydrogen ion transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
molecular_function GO:0015078 hydrogen ion transmembrane transporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh20G009990.1CmaCh20G009990.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000568ATPase, F0 complex, subunit APRINTSPR00123ATPASEAcoord: 40..56
score: 1.0E-18coord: 109..124
score: 1.0E-18coord: 125..147
score: 1.0E-18coord: 169..184
score: 1.0
IPR000568ATPase, F0 complex, subunit AGENE3DG3DSA:1.20.120.220coord: 33..188
score: 1.6
IPR000568ATPase, F0 complex, subunit AHAMAPMF_01393ATP_synth_a_bactcoord: 1..189
score: 12
IPR000568ATPase, F0 complex, subunit APANTHERPTHR11410ATP SYNTHASE SUBUNIT Acoord: 1..192
score: 8.1
IPR000568ATPase, F0 complex, subunit APFAMPF00119ATP-synt_Acoord: 6..182
score: 2.0
IPR000568ATPase, F0 complex, subunit ATIGRFAMsTIGR01131TIGR01131coord: 5..185
score: 4.6
IPR000568ATPase, F0 complex, subunit AunknownSSF81336F1F0 ATP synthase subunit Acoord: 32..183
score: 2.75
IPR023011ATPase, F0 complex, subunit A, active sitePROSITEPS00449ATPASE_Acoord: 128..137
scor

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh20G009990Cucurbita maxima (Rimu)cmacmaB469
CmaCh20G009990Cucurbita moschata (Rifu)cmacmoB551
CmaCh20G009990Cucurbita moschata (Rifu)cmacmoB554
CmaCh20G009990Wild cucumber (PI 183967)cmacpiB546
CmaCh20G009990Cucumber (Chinese Long) v2cmacuB540
CmaCh20G009990Melon (DHL92) v3.5.1cmameB498
CmaCh20G009990Watermelon (Charleston Gray)cmawcgB496
CmaCh20G009990Watermelon (97103) v1cmawmB536
CmaCh20G009990Cucurbita pepo (Zucchini)cmacpeB565
CmaCh20G009990Cucurbita pepo (Zucchini)cmacpeB585
CmaCh20G009990Bottle gourd (USVL1VR-Ls)cmalsiB510
CmaCh20G009990Cucumber (Gy14) v2cgybcmaB221
CmaCh20G009990Melon (DHL92) v3.6.1cmamedB577
CmaCh20G009990Silver-seed gourdcarcmaB0566
CmaCh20G009990Cucumber (Chinese Long) v3cmacucB0671
CmaCh20G009990Cucumber (Chinese Long) v3cmacucB0654
CmaCh20G009990Watermelon (97103) v2cmawmbB584
CmaCh20G009990Wax gourdcmawgoB0698
CmaCh20G009990Wax gourdcmawgoB0700