CmaCh20G009300 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh20G009300
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionEmbryogenesis-associated protein EMB8
LocationCma_Chr20 : 4575737 .. 4579373 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATTTGTCATATTGGCAGCCTGGACAAACCTCATCATGCTGAATATCTTTAAAGTCAGGAACACCATCAAGAAGTTTTTTTGGGGATATTTTCTACAACAACTGAAAACCCACCTGACCGAAACGAGCATGCCAACGAGTTGAGCTTGCATTATGACCAACTTTCTTGATATATTCATCACTAGCTTATGAAACATACAAAGATTCTTTTCTTTTTCCATAAAACTGGATATGAGCATCAACATGTTTCACATTAGAGAGTATTTGAACATCTTTAGGACAAAAAAGAACATACCTTCCTAAATCTGTTATTTGTGATACAGAAGCAAGATTTTTCTTCAAACCAGGAACATGATAAACGTCCTTGAGTAGAACACTCTCATCATTCAAATCTCCTTCTTTCGTCAGAGGATGCATTGAATTATCAGCTGTCACAATGACCTTCTTTTGACAATGTGGACGAACGTCTAATAGAAGAGTTTCGTTTCCAGTTGCATGATGAGAGCAGCCAGAATCGACAATTCATTCTTTATTGTAGTCTATAAAGGCATGAGCATTTGCAGAGACATCATCTTGGTGTACAGCTGAAGTCACATTTGTTGGCTGGTCAAGAATCTCAGTGGTTAAGTCGTGTTCCCAAATTGGATTGGAAGAACTTTTACTTTCATGTACAACATTTACTTCTGATTCTTGCATTTTAACTCAGTAATTTGGCTTGATATGGTCTGACTTTCCGCAACGATAACACACCACTTTCACCTGACAATCTTGTTTAAAATGACCAGGTTTTCCACATCTATAACAAGCTTTAAATGACTTCTTTGACGACTTCTCATTTCTGAGTTGATTCTCATTGCTTGATGAAGGTTTTGAATGAAAATTCTGTCTCCTTTAATCTTTGACATACAACACACCTTCGACTTTAGGGAAAGCTCATTTTGCTAGTCATTTGCTTAATGAAGGCTTCCAAATTGGAAAGAAGATTTTTCAATTCAATAACTGTGAAGGCTTACTTGCCCACCCATGTATTGAGGAAATAAAGGGTATAAAATCTTTTTGTAATCCACGAATGAGATTAAGCCGTAATCGAGCATCACTCACTGGCTCCACAGCATCTAATTCTAAAATTTCAGAACACAGATTTTTCACTTTCAAGAAATATTCTTCAATAGAAAAATTATCTTGAGTTAACATAGCTAGTTCATTCTCTAGAAATTGCAATCGAGCAGTATTTTTCTTAGTGAACAACTTTTGAAGTGTTTCTCATACTTGCTTTGGTGACTTTAAATCACAAACATGATCAATATATTCCTTGTTAATCAAAGTTCCCAAGGTAAATTAGGCTTTTCCACATTTGTTCTCCCATTGTCGGCTTAATTCTATATTCGGTGGAGTATCTGCTGGAATTTCTATATATCACCCCAATTAAATTCTACAAATCTTGCCATTGTAGATAAGCTTCCATACATAACTTCCAATAACTATAGTTATTGCCAATAAGCTTTTCCATAACTACACCCAGGAGCAGTTCCACCCTTCATCTCCTTTGAGTAATAATATCAAACTCTTGTCACTAACTTGCTCTGATACCAACAGATACAATATCTACCACTCAAAAGTGTGAATAGATAATAAAATATTATTACTCAACTAAAAGAATACATATTTAAGAATAAATAAAATTGGGATGGAAGGTTCAATCTTGATATTCACCACCTTTAAATAGGATACAAGATATTAACTAATATCTACGGACTAAATCTTGAAAATAAAATAAAATATACTACAAATCAAATTTAACTAATTATAAATATCTGAAATATATTTTCAAACTGATATAGTCTTCAAATATTAAATGATTACCAATATCATATATTACAATAACTTATTTAAATTCGAAATAAGTTGCACTAAATTATGACAGTTACTTATGGCAAATAAGTAAACTCAAATTATCCCCGGGAATGGATTCTTGCCTTCAGAGGCTTTTTCATGACAACCGTAAGCTCTAACTTCTCCGACAGATCAACTTCGTCTCCCTCCACGGCCTTCCATTCCGACCGCCAAACCAAATTAGCAAGGAAATACTCCAAATGAAGAATCGCCAGACCAAATCCTGGGCATATCCTCCTCCCTGCTCCAAACGGCATCATCTTTATCTCCTTGCTCCCTGTTATATCAAACTCCGCCACTTCTGCTTCTTCTTTCCCTCCTTTCATGAACCGCTCCGGCATAAACGTCGCCGGATCTTCCCACACTTTTGGATCCCAACCCATCTCCGCCACCATGAAATCTACCGTCCCATCCTTTGGTATCACGTAATTTTCCAACTCTGTTTCTTCTTTCACTGCGTGTGGTAACACGAAATGCCCTGGTGGGTGTCTTCTTAATCCTTCCAAAACCACCGCTTTCAGATATGGAACCTTCCGCAAATCCTCTTCCTTCACCTCCTCCCCTGTTCCATCCCCCATTACTCCTTTTATCTCTGCAAAAAGCTTGTGTTGGATTTCTGGGTATTTCACTAAATTCGCCATTATCCATTGCAGGGCCGTCGACGTGGTGTCGGTGCCGGCGTTGAGAAATTCCGAGCATATGGTCACAATCTCCTCATTGGTAAGCTTTCTATTTTCCTCGTCGGGTATCTCCAAATCGAGAAGTGTGTCCGCATATGACACCACGAATTCTTCTTTTTCTTCTTCAGTTTCGGCTCTGTTTGCTCTGTTTGCTCTGTTTACTCTGTTTTGATTGGCCTTCCGCCGAGCTTCAATCAATGGAATTATGACATCCTCTTGGTTCTTTCTTAGTTGGAGAAGCGTCTGCCAGCGTTTTCGGAGCAAAAACTTGGTGAATTTAGGCCAGAAATTGAGAACATTGAAACGCTCAAAACTCAATACAACCGCTCGCTCTACGTCCATGATTTCCCTGATATGGGATTCGTCAAGCCTATCCCCAAAGCACATCAACACCAACAAACAAAACATGGCGTAGTGAAAATGATCGATGACGGTAACGGGAGTGTCAGATTTCGAATGAGAAACAAGCCGATTAATAAGAATATCCAAAACCCACTTGCGAGCTCGATTATAGGACTTAACCCGAGAAGATTGAAGGATTTGGGAAGTGAGATTGCGGCGGAGGAGGCGCCAGAGTGGGCCGTAAGAGGCAGAGCTGATACTGTGTTGGTTACTGGTTAAGAGCTTGCTAACGGGTTGCGCCGGTGGTCGGCCGGAAAACTGAGCACCGTTTTGGACGAGGATCTTGTGGGCAATTGAGTGGTCGGCGATGAAGATGGAGAGGCGAGAGCCTCTGCGGAGGGTGACGATGGGGCCATATTTGGCGACAGCGGTGCGAAGGTAAGACTCCAATTGGAGATTGGATGTGCGGAGCCATAGGAAAGTGGAGATGATGGGGATTGAAGGAGGGCCTGGTGGAAGCTTTGTGGAGCTTCGAAAATGGCTTAAAATGGAGCTTAGAACATAGCTGATGCAGAGGGAGACGACGATGATAAACCACATCGCCATTTTCTCTGCTTGTTATTTTTGTTGAATCCAATCAAAATACTCATACCCACATATAACATATATATATATAGATATATATGCAAGTAATATGTATGTATATTCCAACTCGTCCC

mRNA sequence

ATGAGATTTGTCATATTGGCAGCCTGGACAAACCTCATCATGCTGAATATCTTTAAAGTCAGGAACACCATCAAGAAAATCGCCAGACCAAATCCTGGGCATATCCTCCTCCCTGCTCCAAACGGCATCATCTTTATCTCCTTGCTCCCTGTTATATCAAACTCCGCCACTTCTGCTTCTTCTTTCCCTCCTTTCATGAACCGCTCCGGCATAAACGTCGCCGGATCTTCCCACACTTTTGGATCCCAACCCATCTCCGCCACCATGAAATCTACCGTCCCATCCTTTGGTATCACATATGGAACCTTCCGCAAATCCTCTTCCTTCACCTCCTCCCCTGTTCCATCCCCCATTACTCCTTTTATCTCTGCAAAAAGCTTGTGTTGGATTTCTGGGTATTTCACTAAATTCGCCATTATCCATTGCAGGGCCGTCGACGTGGTGTCGGTGCCGGCGTTGAGAAATTCCGAGCATATGGTCACAATCTCCTCATTGTTGGAGAAGCGTCTGCCAGCGTTTTCGGAGCAAAAACTTGGTGAATTTAGGCCAGAAATTGAGAACATTGAAACGCTCAAAACTCAATACAACCGCTCGCTCTACGTCCATGATTTCCCTGATATGGGATTCGTCAAGCCTATCCCCAAAGCACATCAACACCAACAAACAAAACATGGCGTAGTGAAAATGATCGATGACGGTAACGGGAGTGTCAGATTTCGAATGAGAAACAAGCCGATTAATAAGAATATCCAAAACCCACTTGCGAGCTCGATTATAGGACTTAACCCGAGAAGATTGAAGGATTTGGGAAGTGAGATTGCGGCGGAGGAGGCGCCAGAGTGGGCCGTAAGAGGCAGAGCTGATACTGTGTTGGTTACTGGTTAAGAGCTTGCTAACGGGTTGCGCCGGTGGTCGGCCGGAAAACTGAGCACCGTTTTGGACGAGGATCTTGTGGGCAATTGAGTGGTCGGCGATGAAGATGGAGAGGCGAGAGCCTCTGCGGAGGGTGACGATGGGGCCATATTTGGCGACAGCGGTGCGAAGGTAAGACTCCAATTGGAGATTGGATGTGCGGAGCCATAGGAAAGTGGAGATGATGGGGATTGAAGGAGGGCCTGGTGGAAGCTTTGTGGAGCTTCGAAAATGGCTTAAAATGGAGCTTAGAACATAGCTGATGCAGAGGGAGACGACGATGATAAACCACATCGCCATTTTCTCTGCTTGTTATTTTTGTTGAATCCAATCAAAATACTCATACCCACATATAACATATATATATATAGATATATATGCAAGTAATATGTATGTATATTCCAACTCGTCCC

Coding sequence (CDS)

ATGAGATTTGTCATATTGGCAGCCTGGACAAACCTCATCATGCTGAATATCTTTAAAGTCAGGAACACCATCAAGAAAATCGCCAGACCAAATCCTGGGCATATCCTCCTCCCTGCTCCAAACGGCATCATCTTTATCTCCTTGCTCCCTGTTATATCAAACTCCGCCACTTCTGCTTCTTCTTTCCCTCCTTTCATGAACCGCTCCGGCATAAACGTCGCCGGATCTTCCCACACTTTTGGATCCCAACCCATCTCCGCCACCATGAAATCTACCGTCCCATCCTTTGGTATCACATATGGAACCTTCCGCAAATCCTCTTCCTTCACCTCCTCCCCTGTTCCATCCCCCATTACTCCTTTTATCTCTGCAAAAAGCTTGTGTTGGATTTCTGGGTATTTCACTAAATTCGCCATTATCCATTGCAGGGCCGTCGACGTGGTGTCGGTGCCGGCGTTGAGAAATTCCGAGCATATGGTCACAATCTCCTCATTGTTGGAGAAGCGTCTGCCAGCGTTTTCGGAGCAAAAACTTGGTGAATTTAGGCCAGAAATTGAGAACATTGAAACGCTCAAAACTCAATACAACCGCTCGCTCTACGTCCATGATTTCCCTGATATGGGATTCGTCAAGCCTATCCCCAAAGCACATCAACACCAACAAACAAAACATGGCGTAGTGAAAATGATCGATGACGGTAACGGGAGTGTCAGATTTCGAATGAGAAACAAGCCGATTAATAAGAATATCCAAAACCCACTTGCGAGCTCGATTATAGGACTTAACCCGAGAAGATTGAAGGATTTGGGAAGTGAGATTGCGGCGGAGGAGGCGCCAGAGTGGGCCGTAAGAGGCAGAGCTGATACTGTGTTGGTTACTGGTTAA

Protein sequence

MRFVILAAWTNLIMLNIFKVRNTIKKIARPNPGHILLPAPNGIIFISLLPVISNSATSASSFPPFMNRSGINVAGSSHTFGSQPISATMKSTVPSFGITYGTFRKSSSFTSSPVPSPITPFISAKSLCWISGYFTKFAIIHCRAVDVVSVPALRNSEHMVTISSLLEKRLPAFSEQKLGEFRPEIENIETLKTQYNRSLYVHDFPDMGFVKPIPKAHQHQQTKHGVVKMIDDGNGSVRFRMRNKPINKNIQNPLASSIIGLNPRRLKDLGSEIAAEEAPEWAVRGRADTVLVTG
Homology
[Close]
BLAST of CmaCh20G009300 vs. TrEMBL
Match: A0A0E0EZV5_9ORYZ (Uncharacterized protein OS=Oryza meridionalis PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.5e-21
Identity = 79/181 (43.65%), Postives = 94/181 (51.93%), Query Frame = 1 

Query: 27  IARPNPGHILLPAPNGIIFISLLPVISNSATSASSFPPFMNRSGINVAGSSHTFGSQPIS 86
           +A P+P  ILLP PNGII  S LPV S  + S    PP  NRSG+N  G SH+  S PIS
Sbjct: 37  MATPSPAQILLPTPNGIIRTSRLPVTSTPSPS----PPARNRSGMNSIGFSHSLSSLPIS 96

Query: 87  ATMKSTVPSFGITY------------------GTFRKSSSFT---------SSPV----- 146
           ATMK TV   G+ Y                  G  R+ S  T         SS V     
Sbjct: 97  ATMKFTVAPLGMRYPPTSVSSAILCGSTKWAGGCLRRPSRMTAFRYGMSCVSSSVISSWS 156

Query: 147 -PSPITPFISAKSLCWISGYFTKFAIIHCRAVDVVSVPALRNSEHMVTISSLLEKRLPAF 175
            PS +   IS+ SL W+ G+ T  A+IHC AV VVSVPALRNSE  +T SS +  R P+ 
Sbjct: 157 SPSLVLDLISSWSLDWMDGFLTSSAMIHCSAVAVVSVPALRNSEESITSSSSVRARSPSV 213

[Close]
BLAST of CmaCh20G009300 vs. TrEMBL
Match: A0A0P0XW62_ORYSJ (Os10g0514550 protein OS=Oryza sativa subsp. japonica GN=Os10g0514550 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.2e-19
Identity = 76/191 (39.79%), Postives = 95/191 (49.74%), Query Frame = 1 

Query: 15  LNIFKVRNTIKKIARPNPGHILLPAPNGIIFISLLPVISNSATSASSFPPFMNRSGINVA 74
           L I   + +   +A  +P  IL P PNGI+ I LLPV S  + S    PP  N SG+N  
Sbjct: 25  LTILATKYSRCSMAVLSPAQILRPTPNGIMRIPLLPVTSTPSPS----PPGRNLSGMNSI 84

Query: 75  GSSHTFGSQPISATMKSTVPSFGITY------------------GTFRKSSSFTS----- 134
           G SH+F S PISATMK TV   G+ Y                  G FR+ S  T+     
Sbjct: 85  GFSHSFSSLPISATMKFTVAPLGMRYPPTSMSSAALCGSAKWPGGCFRRPSRMTAFRYGI 144

Query: 135 --------SPVPSPITPFISAKSLCWISGYFTKFAIIHCRAVDVVSVPALRNSEHMVTIS 175
                   S   S +   IS+ SL W+ G+ T  A+IHC  VD+VSVPA RNSE  +TIS
Sbjct: 145 FWVSSSVISSWSSLVLDLISSWSLDWMDGFLTSSAMIHCSVVDIVSVPASRNSEQSLTIS 204

[Close]
BLAST of CmaCh20G009300 vs. TrEMBL
Match: Q0IWE4_ORYSJ (Os10g0515100 protein OS=Oryza sativa subsp. japonica GN=Os10g0515100 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.3e-09
Identity = 41/76 (53.95%), Postives = 49/76 (64.47%), Query Frame = 1 

Query: 100 YGTFRKSSSFTSS---PVPSPITPFISAKSLCWISGYFTKFAIIHCRAVDVVSVPALRNS 159
           YG    SSS TS    P P P+   IS+ S  W+ G+ T  A+IHC AVDVVSVPALRNS
Sbjct: 18  YGMSWMSSSETSRWPPPPPPPVLAMISSWSFDWMDGFLTSSAMIHCSAVDVVSVPALRNS 77

Query: 160 EHMVTISSLLEKRLPA 173
           E  +TISS +  RLP+
Sbjct: 78  EQRLTISSSVSGRLPS 93

[Close]
BLAST of CmaCh20G009300 vs. TrEMBL
Match: A0A0E0GXB4_ORYNI (Uncharacterized protein OS=Oryza nivara PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.9e-09
Identity = 67/177 (37.85%), Postives = 80/177 (45.20%), Query Frame = 1 

Query: 30  PNPGHILLPAPNGIIFISLLPVISNSATSASSFPPFMNRSGINVAGSSHTFGSQPISATM 89
           P PG  L PAPNGII  SL P    S  + S+ PP MN SG N +GS H   S+P+S  M
Sbjct: 106 PMPGQYLRPAPNGIILTSLGP---GSGPTPSASPPAMNLSGRNSSGSVHALPSRPMSPRM 165

Query: 90  KST-VPSFGI-----------------TYGTFRKSSSFTSSPVPSPIT---PFISAK--- 149
           K T  P  G                  T G  R+ S  T+      +    P+ SA    
Sbjct: 166 KCTRAPPSGRERCSTACGERTSRMVSGTGGCMRRLSRITARRYAGVVPRSPPWWSAAATT 225

Query: 150 ---SLCWISGYFTKFAIIHCRAVDVVSVPALRNSEHMVTISSLLEKR---LPAFSEQ 177
              SL WISG  T+ A +H      VSVP LRNS    TISS +  R    P+ S Q
Sbjct: 226 WRHSLSWISGSMTRCARVHSTHDTTVSVPPLRNSATRPTISSSVSARPELRPSLSSQ 279

[Close]
BLAST of CmaCh20G009300 vs. TrEMBL
Match: K3YU72_SETIT (Uncharacterized protein OS=Setaria italica PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.5e-08
Identity = 55/149 (36.91%), Postives = 64/149 (42.95%), Query Frame = 1 

Query: 32  PGHILLPAPNGIIFISLLPVISNSATSASSFPPFMNRSGINVAGSSHTFGSQPISATMKS 91
           PGHIL PAP GII ISLLP            PP  NRSG N   + HT            
Sbjct: 46  PGHILRPAPKGIILISLLP----------PSPPSRNRSGRNSRAAVHT------------ 105

Query: 92  TVPSFGITYGTFRKSSSFTSSPVPSPITPFISAKSLCWISGYFTKFAIIHCRAVDVVSVP 151
                   YG          + +  P   F S+ +L W SG+FT  A+IH   V VVSVP
Sbjct: 106 -----AFRYGI---------ACMSPPSLDFTSSCTLAWTSGWFTSSAMIHSTRVTVVSVP 158

Query: 152 ALRNSEHMVTISSLLEKRLPAFSEQKLGE 181
            LR SE  +TIS  L   L      +  E
Sbjct: 166 PLRISEQRLTISVSLPVTLVGVGNSQRAE 158

[Close]
BLAST of CmaCh20G009300 vs. NCBI nr
Match: gi|937936734|dbj|BAT11648.1| (Os10g0514550 [Oryza sativa Japonica Group])

HSP 1 Score: 104.0 bits (258), Expect = 4.6e-19
Identity = 76/191 (39.79%), Postives = 95/191 (49.74%), Query Frame = 1 

Query: 15  LNIFKVRNTIKKIARPNPGHILLPAPNGIIFISLLPVISNSATSASSFPPFMNRSGINVA 74
           L I   + +   +A  +P  IL P PNGI+ I LLPV S  + S    PP  N SG+N  
Sbjct: 25  LTILATKYSRCSMAVLSPAQILRPTPNGIMRIPLLPVTSTPSPS----PPGRNLSGMNSI 84

Query: 75  GSSHTFGSQPISATMKSTVPSFGITY------------------GTFRKSSSFTS----- 134
           G SH+F S PISATMK TV   G+ Y                  G FR+ S  T+     
Sbjct: 85  GFSHSFSSLPISATMKFTVAPLGMRYPPTSMSSAALCGSAKWPGGCFRRPSRMTAFRYGI 144

Query: 135 --------SPVPSPITPFISAKSLCWISGYFTKFAIIHCRAVDVVSVPALRNSEHMVTIS 175
                   S   S +   IS+ SL W+ G+ T  A+IHC  VD+VSVPA RNSE  +TIS
Sbjct: 145 FWVSSSVISSWSSLVLDLISSWSLDWMDGFLTSSAMIHCSVVDIVSVPASRNSEQSLTIS 204

[Close]
BLAST of CmaCh20G009300 vs. NCBI nr
Match: gi|113639666|dbj|BAF26971.1| (Os10g0515100 [Oryza sativa Japonica Group])

HSP 1 Score: 71.2 bits (173), Expect = 3.3e-09
Identity = 41/76 (53.95%), Postives = 49/76 (64.47%), Query Frame = 1 

Query: 100 YGTFRKSSSFTSS---PVPSPITPFISAKSLCWISGYFTKFAIIHCRAVDVVSVPALRNS 159
           YG    SSS TS    P P P+   IS+ S  W+ G+ T  A+IHC AVDVVSVPALRNS
Sbjct: 18  YGMSWMSSSETSRWPPPPPPPVLAMISSWSFDWMDGFLTSSAMIHCSAVDVVSVPALRNS 77

Query: 160 EHMVTISSLLEKRLPA 173
           E  +TISS +  RLP+
Sbjct: 78  EQRLTISSSVSGRLPS 93

[Close]
BLAST of CmaCh20G009300 vs. NCBI nr
Match: gi|937936743|dbj|BAT11657.1| (Os10g0516000, partial [Oryza sativa Japonica Group])

HSP 1 Score: 65.5 bits (158), Expect = 1.8e-07
Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 1 

Query: 106 SSSFTSSPVPSPITPFISAKSLCWISGYFTKFAIIHCRAVDVVSVPALRNSEHMVTISSL 165
           +SS  +S   SP+   IS+ S  W+ G+ T  A+IHC AVDVVSVPALRNSE  + ISS 
Sbjct: 4   TSSSVTSGWSSPVLDLISSWSFDWMDGFLTSSAMIHCSAVDVVSVPALRNSEQSLMISSS 63

Query: 166 LEKRLPA 173
           +  RLP+
Sbjct: 64  VSARLPS 70

[Close]
BLAST of CmaCh20G009300 vs. NCBI nr
Match: gi|937936732|dbj|BAT11646.1| (Os10g0514425 [Oryza sativa Japonica Group])

HSP 1 Score: 63.5 bits (153), Expect = 6.9e-07
Identity = 39/77 (50.65%), Postives = 46/77 (59.74%), Query Frame = 1 

Query: 32  PGHILLPAPNGIIFISLLPVISNSATSASSFPPFMNRSGINVAGSSHTFGSQPISATMKS 91
           P HIL P PNGI+ I LLPV+S  + S    PP  N SG+N  G SH+  S PISATMK 
Sbjct: 16  PAHILRPTPNGIMRILLLPVMSTPSPS----PPGRNLSGMNCIGFSHSLSSLPISATMKF 75

Query: 92  TVPSFGITYGTFRKSSS 109
           TV   G+ Y     SS+
Sbjct: 76  TVAPLGMRYPPTSMSSA 88

[Close]
BLAST of CmaCh20G009300 vs. NCBI nr
Match: gi|734348166|gb|KHN11744.1| (Embryogenesis-associated protein EMB8 [Glycine soja])

HSP 1 Score: 62.8 bits (151), Expect = 1.2e-06
Identity = 37/61 (60.66%), Postives = 40/61 (65.57%), Query Frame = 1 

Query: 32  PGHILLPAPNGIIFISLLPVISNSATSASSFPPFMNRSGINVAGSSHTFGSQPISATMKS 91
           PGHILLPAPNGII ISLLP++S       S P FMN SG+   GSS    S PISAT K 
Sbjct: 211 PGHILLPAPNGIILISLLPIMSKFVPPFCS-PLFMNLSGLKAKGSSQAVESLPISATRKF 270

Query: 92  T 93
           T
Sbjct: 271 T 270

The following BLAST results are available for this feature:
BLAST of CmaCh20G009300 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh20G009300 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0E0EZV5_9ORYZ4.5e-2143.65Uncharacterized protein OS=Oryza meridionalis PE=4 SV=1[more]
A0A0P0XW62_ORYSJ3.2e-1939.79Os10g0514550 protein OS=Oryza sativa subsp. japonica GN=Os10g0514550 PE=4 SV=1[more]
Q0IWE4_ORYSJ2.3e-0953.95Os10g0515100 protein OS=Oryza sativa subsp. japonica GN=Os10g0515100 PE=4 SV=1[more]
A0A0E0GXB4_ORYNI3.9e-0937.85Uncharacterized protein OS=Oryza nivara PE=4 SV=1[more]
K3YU72_SETIT2.5e-0836.91Uncharacterized protein OS=Setaria italica PE=4 SV=1[more]
BLAST of CmaCh20G009300 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmaCh20G009300 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|937936734|dbj|BAT11648.1|4.6e-1939.79Os10g0514550 [Oryza sativa Japonica Group][more]
gi|113639666|dbj|BAF26971.1|3.3e-0953.95Os10g0515100 [Oryza sativa Japonica Group][more]
gi|937936743|dbj|BAT11657.1|1.8e-0752.24Os10g0516000, partial [Oryza sativa Japonica Group][more]
gi|937936732|dbj|BAT11646.1|6.9e-0750.65Os10g0514425 [Oryza sativa Japonica Group][more]
gi|734348166|gb|KHN11744.1|1.2e-0660.66Embryogenesis-associated protein EMB8 [Glycine soja][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh20G009300.1CmaCh20G009300.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh20G009300Lsi10G002490Bottle gourd (USVL1VR-Ls)cmalsiB507
CmaCh20G009300Bhi10G001291Wax gourdcmawgoB0696
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh20G009300Cucurbita maxima (Rimu)cmacmaB469
CmaCh20G009300Cucumber (Gy14) v1cgycmaB0881
CmaCh20G009300Cucurbita moschata (Rifu)cmacmoB551
CmaCh20G009300Cucurbita moschata (Rifu)cmacmoB554
CmaCh20G009300Wild cucumber (PI 183967)cmacpiB549
CmaCh20G009300Cucumber (Chinese Long) v2cmacuB544
CmaCh20G009300Melon (DHL92) v3.5.1cmameB493
CmaCh20G009300Watermelon (Charleston Gray)cmawcgB474
CmaCh20G009300Watermelon (97103) v1cmawmB510
CmaCh20G009300Cucurbita pepo (Zucchini)cmacpeB565
CmaCh20G009300Cucurbita pepo (Zucchini)cmacpeB585
CmaCh20G009300Cucumber (Gy14) v2cgybcmaB220
CmaCh20G009300Melon (DHL92) v3.6.1cmamedB573
CmaCh20G009300Silver-seed gourdcarcmaB0584
CmaCh20G009300Silver-seed gourdcarcmaB1459
CmaCh20G009300Cucumber (Chinese Long) v3cmacucB0653
CmaCh20G009300Watermelon (97103) v2cmawmbB598