CmaCh20G008610 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh20G008610
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPentatricopeptide repeat-containing protein
LocationCma_Chr20 : 4141984 .. 4143483 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCATTCCGCTGCTTAAACGATCCCTTTGGCTGATTCCAAACTCCACCTTTAACCTCCCATTTTCCCCTTCCTTCTTCTCATCCTCACCGGCCGCCGTACCTTTGCCGTCGACGAAGCCTTCAATCTCGACCGTTGTTTCAGTTCTTACTCACCACCGCTCTAAGTCTCGCTGGCGATTCCTCAACTCCCTCTGTCCTGACGGCTTCGATCCCGGTGAGTTTTCCGATATTGTTCTACAGATCAAGAATAATTCTCATCTCGTCCTCCGCTTCTTCCTCTGGACTCGGAGCAAGTCACTCTGCAATCACGATCTTGTTTCATACTCTACCGTCATCCATATCCTTGCTCGCGGCCGACTTAGAACTCATGCCAAGGATGTTATTCAGAACGCCATTAGGGCTACGGCGCTTGAAGATGACGATGATTGTTCCCAATGTGAGCGGTTTTCGTCTTCGAGGCCTTTGAAGCTGTTTGAAACCCTCGTTAAGACGTATAAACAGTGTGGCTCTGCTCCCTTTGTGTTTGATTTGTTGATTAAAGCTCTTTTGGATTCTAAAAAGCTCGATCCAGCCATTCAAATTGTTAGAATGTTACGGTCTCGTGGGATTAGCCCACAAATTGGTACGTTGAATTCGTTGATTCTGTGTATGTCGAAATGCGAAGGGGCTAATGCAGGTTATGCACTTTTTAGAGAAGTTTTTGGTTTGAATTGTGAAATTGAGGAAGAAAATGTCAAAGTAAAGGCTCGGGCTAGCCCTAATGTGCATACTTTTAATACATTAATGGTGTGTTTCTATCAAGATGGGTTGGTGGGGCGGGTGAAGGAGATATGGGATCAATTAGCTGATTCAAATTCAATTCCAAACAGCTACAGTTATAGTATTTTGATGGCAGTTTTATGCGAAGAGAAAAGGATGGGTGAAGCAGAGGAGTTGTGGGAAGAAATGAAAATGAAAAAGTTGGAGATTGATGCTGTAGCTTACAATACTATAATTGGTGGATTTTGTAAAGCAGGAAATGTTCGTAGGGCTGAAGAGTTCTTTAGGGAAATGGAGCTCTGTGGAACGGAGAGTACGTTCTCCACCTTTGAGCATCTCATCAATGGCTATTGTGAGACTGGAGATGTTGATTCTGCATTACTTGTGTATAAGGATATGCGCAGGAAATCTTTTAGTCTCAACCCTTTGATGCTGGAAGCAATTACAAGAGGGTTGTGTGTGGAGACGAGGCTTTTAGAAGCTTTAGACGTTTTCGGTTTCGCCACAGAACACACTAACTTTTGCCCGACAATGGAGACTTATGAACTTCTGATAAATGGTTTGTGTCAGAAAGGGAAACTTGAAGCTGCATTTAAGCTTCAAGCGCAGATGGTAGGGAAAGGTTTTAAGCCCAATTCAAAGATTTACCAATCTTTTATTGATGCCTACTCAAAAGAAGGAAATGAAGAAATGGTCAAGAAGTTGGGAGAGGAAATACTTGAAATCCAGCTGAGTTGA

mRNA sequence

ATGTCCATTCCGCTGCTTAAACGATCCCTTTGGCTGATTCCAAACTCCACCTTTAACCTCCCATTTTCCCCTTCCTTCTTCTCATCCTCACCGGCCGCCGTACCTTTGCCGTCGACGAAGCCTTCAATCTCGACCGTTGTTTCAGTTCTTACTCACCACCGCTCTAAGTCTCGCTGGCGATTCCTCAACTCCCTCTGTCCTGACGGCTTCGATCCCGGTGAGTTTTCCGATATTGTTCTACAGATCAAGAATAATTCTCATCTCGTCCTCCGCTTCTTCCTCTGGACTCGGAGCAAGTCACTCTGCAATCACGATCTTGTTTCATACTCTACCGTCATCCATATCCTTGCTCGCGGCCGACTTAGAACTCATGCCAAGGATGTTATTCAGAACGCCATTAGGGCTACGGCGCTTGAAGATGACGATGATTGTTCCCAATGTGAGCGGTTTTCGTCTTCGAGGCCTTTGAAGCTGTTTGAAACCCTCGTTAAGACGTATAAACAGTGTGGCTCTGCTCCCTTTGTGTTTGATTTGTTGATTAAAGCTCTTTTGGATTCTAAAAAGCTCGATCCAGCCATTCAAATTGTTAGAATGTTACGGTCTCGTGGGATTAGCCCACAAATTGGTACGTTGAATTCGTTGATTCTGTGTATGTCGAAATGCGAAGGGGCTAATGCAGGTTATGCACTTTTTAGAGAAGTTTTTGGTTTGAATTGTGAAATTGAGGAAGAAAATGTCAAAGTAAAGGCTCGGGCTAGCCCTAATGTGCATACTTTTAATACATTAATGGTGTGTTTCTATCAAGATGGGTTGGTGGGGCGGGTGAAGGAGATATGGGATCAATTAGCTGATTCAAATTCAATTCCAAACAGCTACAGTTATAGTATTTTGATGGCAGTTTTATGCGAAGAGAAAAGGATGGGTGAAGCAGAGGAGTTGTGGGAAGAAATGAAAATGAAAAAGTTGGAGATTGATGCTGTAGCTTACAATACTATAATTGGTGGATTTTGTAAAGCAGGAAATGTTCGTAGGGCTGAAGAGTTCTTTAGGGAAATGGAGCTCTGTGGAACGGAGAGTACGTTCTCCACCTTTGAGCATCTCATCAATGGCTATTGTGAGACTGGAGATGTTGATTCTGCATTACTTGTGTATAAGGATATGCGCAGGAAATCTTTTAGTCTCAACCCTTTGATGCTGGAAGCAATTACAAGAGGGTTGTGTGTGGAGACGAGGCTTTTAGAAGCTTTAGACGTTTTCGGTTTCGCCACAGAACACACTAACTTTTGCCCGACAATGGAGACTTATGAACTTCTGATAAATGGTTTGTGTCAGAAAGGGAAACTTGAAGCTGCATTTAAGCTTCAAGCGCAGATGGTAGGGAAAGGTTTTAAGCCCAATTCAAAGATTTACCAATCTTTTATTGATGCCTACTCAAAAGAAGGAAATGAAGAAATGGTCAAGAAGTTGGGAGAGGAAATACTTGAAATCCAGCTGAGTTGA

Coding sequence (CDS)

ATGTCCATTCCGCTGCTTAAACGATCCCTTTGGCTGATTCCAAACTCCACCTTTAACCTCCCATTTTCCCCTTCCTTCTTCTCATCCTCACCGGCCGCCGTACCTTTGCCGTCGACGAAGCCTTCAATCTCGACCGTTGTTTCAGTTCTTACTCACCACCGCTCTAAGTCTCGCTGGCGATTCCTCAACTCCCTCTGTCCTGACGGCTTCGATCCCGGTGAGTTTTCCGATATTGTTCTACAGATCAAGAATAATTCTCATCTCGTCCTCCGCTTCTTCCTCTGGACTCGGAGCAAGTCACTCTGCAATCACGATCTTGTTTCATACTCTACCGTCATCCATATCCTTGCTCGCGGCCGACTTAGAACTCATGCCAAGGATGTTATTCAGAACGCCATTAGGGCTACGGCGCTTGAAGATGACGATGATTGTTCCCAATGTGAGCGGTTTTCGTCTTCGAGGCCTTTGAAGCTGTTTGAAACCCTCGTTAAGACGTATAAACAGTGTGGCTCTGCTCCCTTTGTGTTTGATTTGTTGATTAAAGCTCTTTTGGATTCTAAAAAGCTCGATCCAGCCATTCAAATTGTTAGAATGTTACGGTCTCGTGGGATTAGCCCACAAATTGGTACGTTGAATTCGTTGATTCTGTGTATGTCGAAATGCGAAGGGGCTAATGCAGGTTATGCACTTTTTAGAGAAGTTTTTGGTTTGAATTGTGAAATTGAGGAAGAAAATGTCAAAGTAAAGGCTCGGGCTAGCCCTAATGTGCATACTTTTAATACATTAATGGTGTGTTTCTATCAAGATGGGTTGGTGGGGCGGGTGAAGGAGATATGGGATCAATTAGCTGATTCAAATTCAATTCCAAACAGCTACAGTTATAGTATTTTGATGGCAGTTTTATGCGAAGAGAAAAGGATGGGTGAAGCAGAGGAGTTGTGGGAAGAAATGAAAATGAAAAAGTTGGAGATTGATGCTGTAGCTTACAATACTATAATTGGTGGATTTTGTAAAGCAGGAAATGTTCGTAGGGCTGAAGAGTTCTTTAGGGAAATGGAGCTCTGTGGAACGGAGAGTACGTTCTCCACCTTTGAGCATCTCATCAATGGCTATTGTGAGACTGGAGATGTTGATTCTGCATTACTTGTGTATAAGGATATGCGCAGGAAATCTTTTAGTCTCAACCCTTTGATGCTGGAAGCAATTACAAGAGGGTTGTGTGTGGAGACGAGGCTTTTAGAAGCTTTAGACGTTTTCGGTTTCGCCACAGAACACACTAACTTTTGCCCGACAATGGAGACTTATGAACTTCTGATAAATGGTTTGTGTCAGAAAGGGAAACTTGAAGCTGCATTTAAGCTTCAAGCGCAGATGGTAGGGAAAGGTTTTAAGCCCAATTCAAAGATTTACCAATCTTTTATTGATGCCTACTCAAAAGAAGGAAATGAAGAAATGGTCAAGAAGTTGGGAGAGGAAATACTTGAAATCCAGCTGAGTTGA

Protein sequence

MSIPLLKRSLWLIPNSTFNLPFSPSFFSSSPAAVPLPSTKPSISTVVSVLTHHRSKSRWRFLNSLCPDGFDPGEFSDIVLQIKNNSHLVLRFFLWTRSKSLCNHDLVSYSTVIHILARGRLRTHAKDVIQNAIRATALEDDDDCSQCERFSSSRPLKLFETLVKTYKQCGSAPFVFDLLIKALLDSKKLDPAIQIVRMLRSRGISPQIGTLNSLILCMSKCEGANAGYALFREVFGLNCEIEEENVKVKARASPNVHTFNTLMVCFYQDGLVGRVKEIWDQLADSNSIPNSYSYSILMAVLCEEKRMGEAEELWEEMKMKKLEIDAVAYNTIIGGFCKAGNVRRAEEFFREMELCGTESTFSTFEHLINGYCETGDVDSALLVYKDMRRKSFSLNPLMLEAITRGLCVETRLLEALDVFGFATEHTNFCPTMETYELLINGLCQKGKLEAAFKLQAQMVGKGFKPNSKIYQSFIDAYSKEGNEEMVKKLGEEILEIQLS
Homology
[Close]
BLAST of CmaCh20G008610 vs. Swiss-Prot
Match: PP155_ARATH (Pentatricopeptide repeat-containing protein At2g15980 OS=Arabidopsis thaliana GN=At2g15980 PE=2 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 7.3e-126
Identity = 230/471 (48.83%), Postives = 317/471 (67.30%), Query Frame = 1 

Query: 29  SSPAAVPLPSTKPSISTVVSVLTHHRSKSRWRFLNSLCPDGFDPGEFSDIVLQIKNNSHL 88
           SSP   P P + P IS  VS+LTHHRSKSRW  L SL P GF P +FS+I L ++NN HL
Sbjct: 31  SSP---PSPPSDPLISDAVSILTHHRSKSRWSTLRSLQPSGFTPSQFSEITLCLRNNPHL 90

Query: 89  VLRFFLWTRSKSLCNHDLVSYSTVIHILARGRLRTHAKDVIQNAIRATALEDDDDCSQCE 148
            LRFFL+TR  SLC+HD  S ST+IHIL+R RL++HA ++I+ A+R  A ++D+D     
Sbjct: 91  SLRFFLFTRRYSLCSHDTHSCSTLIHILSRSRLKSHASEIIRLALRLAATDEDED----- 150

Query: 149 RFSSSRPLKLFETLVKTYKQCGSAPFVFDLLIKALLDSKKLDPAIQIVRMLRSRGISPQI 208
                R LK+F +L+K+Y +CGSAPFVFDLLIK+ LDSK++D A+ ++R LRSRGI+ QI
Sbjct: 151 -----RVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQI 210

Query: 209 GTLNSLILCMSKCEGANAGYALFREVFGLNCEIEEENVKVKARASPNVHTFNTLMVCFYQ 268
            T N+LI  +S+  GA+ GY ++REVFGL+    +E  K+  +  PN  TFN++MV FY+
Sbjct: 211 STCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYR 270

Query: 269 DGLVGRVKEIWDQLADS-NSIPNSYSYSILMAVLCEEKRMGEAEELWEEMKMKKLEIDAV 328
           +G    V+ IW ++ +     PN YSY++LM   C    M EAE++WEEMK++ +  D V
Sbjct: 271 EGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIV 330

Query: 329 AYNTIIGGFCKAGNVRRAEEFFREMELCGTESTFSTFEHLINGYCETGDVDSALLVYKDM 388
           AYNT+IGG C    V +A+E FR+M L G E T  T+EHL+NGYC+ GDVDS L+VY++M
Sbjct: 331 AYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREM 390

Query: 389 RRKSFSLNPLMLEAITRGLCVE---TRLLEALDVFGFATEHTNFCPTMETYELLINGLCQ 448
           +RK F  + L +EA+  GLC +    R++EA D+   A     F P+   YELL+  LC+
Sbjct: 391 KRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCE 450

Query: 449 KGKLEAAFKLQAQMVGKGFKPNSKIYQSFIDAYSKEGNEEMVKKLGEEILE 496
            GK++ A  +QA+MVGKGFKP+ + Y++FID Y   G+EE    L  E+ E
Sbjct: 451 DGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSALLAIEMAE 488

[Close]
BLAST of CmaCh20G008610 vs. Swiss-Prot
Match: PP338_ARATH (Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidopsis thaliana GN=At4g26680 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 2.1e-40
Identity = 112/443 (25.28%), Postives = 197/443 (44.47%), Query Frame = 1 

Query: 37  PSTKPSISTVVSVLTHHRSKSRWRFLNSLCPDGFDPGEFSDIVLQIKNNSHLVLRFFLWT 96
           P  K      V+V   H  +S W  LN L  D  D     +++L+I+ +  L L FF W 
Sbjct: 47  PEPKGQDLDFVNVAHSHLIQSDWDKLNKLS-DHLDSFRVKNVLLKIQKDYLLSLEFFNWA 106

Query: 97  RSKSLCNHDLVSYSTVIHILARGRLRTHAKDVIQNAIRATALEDDDDCSQCERFSSSRPL 156
           ++++  +H L +++ V+H L + R    A+ ++++ +    ++               P 
Sbjct: 107 KTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVD--------------LPA 166

Query: 157 KLFETLVKTYKQCGSAPFVFDLLIKALLDSKKLDPAIQIVRMLRSRGISPQIGTLNSLIL 216
           K+F+ L+ +Y++C S P VFD L K     KK   A      ++  G  P + + N+ + 
Sbjct: 167 KVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMS 226

Query: 217 CMSKCEGANAGYALFREVFGLNCEIEEENVKVKARASPNVHTFNTLMVCFYQDGLVGRVK 276
            +      +     +RE+    C+I           SPN +T N +M  + + G + +  
Sbjct: 227 SLLGQGRVDIALRFYREM--RRCKI-----------SPNPYTLNMVMSGYCRSGKLDKGI 286

Query: 277 EIWDQLADSNSIPNSYSYSILMAVLCEEKRMGEAEELWEEMKMKKLEIDAVAYNTIIGGF 336
           E+   +          SY+ L+A  CE+  +  A +L   M    L+ + V +NT+I GF
Sbjct: 287 ELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGF 346

Query: 337 CKAGNVRRAEEFFREMELCGTESTFSTFEHLINGYCETGDVDSALLVYKDMRRKSFSLNP 396
           C+A  ++ A + F EM+         T+  LINGY + GD + A   Y+DM       + 
Sbjct: 347 CRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDI 406

Query: 397 LMLEAITRGLCVETRLLEALDVFGFATEHTNFCPTMETYELLINGLCQKGKLEAAFKLQA 456
           L   A+  GLC + +  +A   F    +  N  P   T+  LI G C +   +  F+L  
Sbjct: 407 LTYNALIFGLCKQAKTRKAAQ-FVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYK 460

Query: 457 QMVGKGFKPNSKIYQSFIDAYSK 480
            M+  G  PN + +   + A+ +
Sbjct: 467 SMIRSGCHPNEQTFNMLVSAFCR 460

[Close]
BLAST of CmaCh20G008610 vs. Swiss-Prot
Match: PPR91_ARATH (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 157.9 bits (398), Expect = 2.9e-37
Identity = 92/321 (28.66%), Postives = 164/321 (51.09%), Query Frame = 1 

Query: 175 VFDLLIKALLDSKKLDPAIQIVRMLRSRGISPQIGTLNSLILCMSKCEGANAGYALFREV 234
           +++ +I  L   K +D A+ + + + ++GI P + T +SLI C+         Y  + + 
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL-------CNYGRWSDA 317

Query: 235 FGLNCEIEEENVKVKARASPNVHTFNTLMVCFYQDGLVGRVKEIWDQLADSNSIPNSYSY 294
             L  ++ E  +      +P+V TF+ L+  F ++G +   ++++D++   +  P+  +Y
Sbjct: 318 SRLLSDMIERKI------NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 377

Query: 295 SILMAVLCEEKRMGEAEELWEEMKMKKLEIDAVAYNTIIGGFCKAGNVRRAEEFFREMEL 354
           S L+   C   R+ EA++++E M  K    D V YNT+I GFCK   V    E FREM  
Sbjct: 378 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 437

Query: 355 CGTESTFSTFEHLINGYCETGDVDSALLVYKDMRRKSFSLNPLMLEAITRGLCVETRLLE 414
            G      T+  LI G  + GD D A  ++K+M       N +    +  GLC   +L +
Sbjct: 438 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 497

Query: 415 ALDVFGFATEHTNFCPTMETYELLINGLCQKGKLEAAFKLQAQMVGKGFKPNSKIYQSFI 474
           A+ VF +  + +   PT+ TY ++I G+C+ GK+E  + L   +  KG KP+   Y + I
Sbjct: 498 AMVVFEY-LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 557

Query: 475 DAYSKEGNEEMVKKLGEEILE 496
             + ++G++E    L +E+ E
Sbjct: 558 SGFCRKGSKEEADALFKEMKE 564

[Close]
BLAST of CmaCh20G008610 vs. Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.9e-37
Identity = 106/432 (24.54%), Postives = 207/432 (47.92%), Query Frame = 1 

Query: 70  FDPGEFSDIVLQIKNNSHLVLRFFLWTRSKSLCNHDLVSYSTVIHILARGRLRTHAKDVI 129
           F P   S+++L+ +N+  L+L+F  W          L      +HIL + +L   A+ ++
Sbjct: 46  FTPEAASNLLLKSQNDQALILKFLNWANPHQFFT--LRCKCITLHILTKFKLYKTAQ-IL 105

Query: 130 QNAIRATALEDDDDCSQCERFSSSRPLKLFETLVKTYKQCGSAPFVFDLLIKALLDSKKL 189
              + A  L+D+        ++S     +F++L +TY  C S   VFDL++K+      +
Sbjct: 106 AEDVAAKTLDDE--------YASL----VFKSLQETYDLCYSTSSVFDLVVKSYSRLSLI 165

Query: 190 DPAIQIVRMLRSRGISPQIGTLNSLILCMSKCEGANAGYA--LFREVFGLNCEIEEENVK 249
           D A+ IV + ++ G  P + + N+++    + +  N  +A  +F+E+             
Sbjct: 166 DKALSIVHLAQAHGFMPGVLSYNAVLDATIRSK-RNISFAENVFKEM------------- 225

Query: 250 VKARASPNVHTFNTLMVCFYQDGLVGRVKEIWDQLADSNSIPNSYSYSILMAVLCEEKRM 309
           ++++ SPNV T+N L+  F   G +     ++D++     +PN  +Y+ L+   C+ +++
Sbjct: 226 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 285

Query: 310 GEAEELWEEMKMKKLEIDAVAYNTIIGGFCKAGNVRRAEEFFREMELCGTESTFSTFEHL 369
            +  +L   M +K LE + ++YN +I G C+ G ++       EM   G      T+  L
Sbjct: 286 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 345

Query: 370 INGYCETGDVDSALLVYKDMRRKSFSLNPLMLEAITRGLCVETRLLEALDVFGFATEHTN 429
           I GYC+ G+   AL+++ +M R   + + +   ++   +C    +  A++ F        
Sbjct: 346 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME-FLDQMRVRG 405

Query: 430 FCPTMETYELLINGLCQKGKLEAAFKLQAQMVGKGFKPNSKIYQSFIDAYSKEGNEEMVK 489
            CP   TY  L++G  QKG +  A+++  +M   GF P+   Y + I+ +   G  E   
Sbjct: 406 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 447

Query: 490 KLGEEILEIQLS 500
            + E++ E  LS
Sbjct: 466 AVLEDMKEKGLS 447

[Close]
BLAST of CmaCh20G008610 vs. Swiss-Prot
Match: PP102_ARATH (Pentatricopeptide repeat-containing protein At1g63400 OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 6.3e-37
Identity = 90/321 (28.04%), Postives = 164/321 (51.09%), Query Frame = 1 

Query: 175 VFDLLIKALLDSKKLDPAIQIVRMLRSRGISPQIGTLNSLILCMSKCEGANAGYALFREV 234
           ++  +I +L   +  D A+ +   + ++G+ P + T +SLI C+   E  +    L  ++
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321

Query: 235 FGLNCEIEEENVKVKARASPNVHTFNTLMVCFYQDGLVGRVKEIWDQLADSNSIPNSYSY 294
                        ++ + +PNV TFN L+  F ++G +   ++++D++   +  P+ ++Y
Sbjct: 322 -------------IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 381

Query: 295 SILMAVLCEEKRMGEAEELWEEMKMKKLEIDAVAYNTIIGGFCKAGNVRRAEEFFREMEL 354
           S L+   C   R+ EA+ ++E M  K    + V YNT+I GFCKA  +    E FREM  
Sbjct: 382 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ 441

Query: 355 CGTESTFSTFEHLINGYCETGDVDSALLVYKDMRRKSFSLNPLMLEAITRGLCVETRLLE 414
            G      T+  LI+G+ +  D D+A +V+K M       N +    +  GLC   +L +
Sbjct: 442 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 501

Query: 415 ALDVFGFATEHTNFCPTMETYELLINGLCQKGKLEAAFKLQAQMVGKGFKPNSKIYQSFI 474
           A+ VF +  + +   PT+ TY ++I G+C+ GK+E  + L   +  KG KP+  IY + I
Sbjct: 502 AMVVFEY-LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 561

Query: 475 DAYSKEGNEEMVKKLGEEILE 496
             + ++G +E    L  ++ E
Sbjct: 562 SGFCRKGLKEEADALFRKMRE 568

[Close]
BLAST of CmaCh20G008610 vs. TrEMBL
Match: A0A0A0LIN1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G239400 PE=4 SV=1)

HSP 1 Score: 808.1 bits (2086), Expect = 5.8e-231
Identity = 403/499 (80.76%), Postives = 441/499 (88.38%), Query Frame = 1 

Query: 1   MSIPLLKRSLWLIPNSTFNLPFSPSFFSSSPAAVPLPSTKPSISTVVSVLTHHRSKSRWR 60
           MS PLLKR+L  I NST +L FS SF SSSP   P PSTKPSISTVVSVLTH RSKSRWR
Sbjct: 1   MSGPLLKRTLRPIGNSTVHLQFSSSFSSSSPPTDPSPSTKPSISTVVSVLTHQRSKSRWR 60

Query: 61  FLNSLCPDGFDPGEFSDIVLQIKNNSHLVLRFFLWTRSKSLCNHDLVSYSTVIHILARGR 120
           FLNSLCP+GFDPGEFSDI+LQIKNN HL LRFFLWT++KSLCNH+L+SYST+IHILARGR
Sbjct: 61  FLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR 120

Query: 121 LRTHAKDVIQNAIRATALEDDDDCSQCERFSSSRPLKLFETLVKTYKQCGSAPFVFDLLI 180
           LRTHAKDVIQ AIRA  LED D+ S+ ERFS SRPLKLFETLVKTYK+CGSAPFVFDLLI
Sbjct: 121 LRTHAKDVIQTAIRAAQLEDSDNYSKTERFSPSRPLKLFETLVKTYKRCGSAPFVFDLLI 180

Query: 181 KALLDSKKLDPAIQIVRMLRSRGISPQIGTLNSLILCMSKCEGANAGYALFREVFGLNCE 240
           KALLDSKKLD +I+IVRMLRSRGISPQ+ TLNSLIL +SKC+GAN  YA+FREVFGL+CE
Sbjct: 181 KALLDSKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREVFGLDCE 240

Query: 241 IEEENVKVKARASPNVHTFNTLMVCFYQDGLVGRVKEIWDQLADSNSIPNSYSYSILMAV 300
           IEEE+VK+K R SPNVHTFNTLM CFY+DG  GRVKEIWDQLADSNS PNSYSYSILM V
Sbjct: 241 IEEEHVKLKGRVSPNVHTFNTLMDCFYRDGFAGRVKEIWDQLADSNSTPNSYSYSILMTV 300

Query: 301 LCEEKRMGEAEELWEEMKMKKLEIDAVAYNTIIGGFCKAGNVRRAEEFFREMELCGTEST 360
           LCEEKR GEAEELWEEMKMKKLE D VAYNTIIGGFCKAG+  RAEEF+REMEL G EST
Sbjct: 301 LCEEKRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMELSGIEST 360

Query: 361 FSTFEHLINGYCETGDVDSALLVYKDMRRKSFSLNPLMLEAITRGLCVETRLLEALDVFG 420
           FST EHLINGYC+TGDVDSALLVYKDMRRK FSLN   LE + R LC E RLLEALDVFG
Sbjct: 361 FSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASTLEGLIRMLCAERRLLEALDVFG 420

Query: 421 FATEHTNFCPTMETYELLINGLCQKGKLEAAFKLQAQMVGKGFKPNSKIYQSFIDAYSKE 480
           FA E+++FCPTMET+E+LIN LCQ+GK+E AFKLQAQMVG+GFKPN KIYQSFIDAY+KE
Sbjct: 421 FAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGRGFKPNLKIYQSFIDAYTKE 480

Query: 481 GNEEMVKKLGEEILEIQLS 500
           GN EMV+KL +E+ EIQLS
Sbjct: 481 GNAEMVEKLWKEMHEIQLS 499

[Close]
BLAST of CmaCh20G008610 vs. TrEMBL
Match: M5VVR2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004794mg PE=4 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 2.7e-159
Identity = 290/496 (58.47%), Postives = 368/496 (74.19%), Query Frame = 1 

Query: 1   MSIPLLKRSLWLIPNSTFNLPFSPSFFSSSPAAVPLPS-TKPSISTVVSVLTHHRSKSRW 60
           M+  +L+R+L+    +T   P S S FSSSP +   PS T P IS VVS++T+ RSK+RW
Sbjct: 1   MAFQILRRNLF---PATKPRPPSVSHFSSSPPSDQTPSQTNPLISDVVSIITNLRSKTRW 60

Query: 61  RFLNSLCPDGFDPGEFSDIVLQIKNNSHLVLRFFLWTRSKSLCNHDLVSYSTVIHILARG 120
            +L SL P GFD  +FS I L IKNN  L LRFFLWT+ KSLCNH+L S+ST+IHILARG
Sbjct: 61  SYLRSLYPHGFDSNDFSQIALHIKNNPRLALRFFLWTQHKSLCNHNLQSHSTIIHILARG 120

Query: 121 RLRTHAKDVIQNAIRATALEDDDDCSQCERFSSSRPLKLFETLVKTYKQCGSAPFVFDLL 180
           RLR+ A D+I+ AIR +  E             S+PLK+FE+LVKTY+QC SAPFVFDLL
Sbjct: 121 RLRSQAYDLIRTAIRVSESESIGS-------HESKPLKVFESLVKTYRQCDSAPFVFDLL 180

Query: 181 IKALLDSKKLDPAIQIVRMLRSRGISPQIGTLNSLILCMSKCEGANAGYALFREVFGLNC 240
           IKA L+SKK+DPAIQIVRML SRGISP + T N+LI  +S+  GA AGY ++RE+FGL+C
Sbjct: 181 IKACLESKKIDPAIQIVRMLLSRGISPGLSTCNALIRLLSQRRGAYAGYEIYREIFGLDC 240

Query: 241 EIEEENVKVKARASPNVHTFNTLMVCFYQDGLVGRVKEIWDQLADSNSIPNSYSYSILMA 300
           E+ E NVK  AR SPNV TFN LM+ FY+DGLV +VKEIWDQ+AD N  PN YSYSILMA
Sbjct: 241 EVLEHNVKRVARISPNVETFNALMLGFYRDGLVEKVKEIWDQMADLNCCPNGYSYSILMA 300

Query: 301 VLCEEKRMGEAEELWEEMKMKKLEIDAVAYNTIIGGFCKAGNVRRAEEFFREMELCGTES 360
             CE+++M EAEE+WEEM+ K LE D VAYNT+IGGFC+ G +  AEEF +EM L G ES
Sbjct: 301 AYCEQEKMNEAEEVWEEMRAKGLEPDVVAYNTMIGGFCRVGEIEMAEEFSKEMGLSGIES 360

Query: 361 TFSTFEHLINGYCETGDVDSALLVYKDMRRKSFSLNPLMLEAITRGLCVETRLLEALDVF 420
           T +T+EHLI GYC+ G++D+A+L+YKDM RK F      ++++ RGLC E+R+LEA +V 
Sbjct: 361 TDATYEHLITGYCKMGNLDAAMLLYKDMLRKDFRPEGSTMDSLIRGLCDESRVLEAFEVM 420

Query: 421 GFATEHTNFCPTMETYELLINGLCQKGKLEAAFKLQAQMVGKGFKPNSKIYQSFIDAYSK 480
             A  H  FCPT ++YE LI GLC++ KLE A KLQA+MVGKGFKPNS+IY +FI  Y K
Sbjct: 421 RGAVVHFGFCPTEKSYEFLIRGLCEEEKLEEALKLQAEMVGKGFKPNSEIYSAFISGYMK 480

Query: 481 EGNEEMVKKLGEEILE 496
           +GN+E+ ++L  E+L+
Sbjct: 481 QGNKEVAERLRNEMLD 486

[Close]
BLAST of CmaCh20G008610 vs. TrEMBL
Match: A0A0R0HG21_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G122100 PE=4 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 2.4e-144
Identity = 273/503 (54.27%), Postives = 356/503 (70.78%), Query Frame = 1 

Query: 1   MSIPLLKRSLWLIPNSTFNLPFSPSFFSSSPAAVPLPSTKPSISTVVSVLTHHRSKSRWR 60
           M+I +LK+    +    + L FS  F  S+ A+  L      ++  VS+LTHHRSKSRW 
Sbjct: 1   MAIQILKQFSQTLRPKPWTLFFS--FSCSNDASQSL------VTDAVSILTHHRSKSRWS 60

Query: 61  FLNSLCPDGFDPGEFSDIVLQIKNNSHLVLRFFLWTRSKSLCNHDLVSYSTVIHILARGR 120
            L S CP+G  P EFS+I L IKN   L LRFFLWT+SKSLCNH+L SYS++IH+LAR R
Sbjct: 61  NLRSACPNGITPAEFSEITLHIKNKPQLALRFFLWTKSKSLCNHNLASYSSIIHLLARAR 120

Query: 121 LRTHAKDVIQNAIRATALEDDDDCSQCERFSSSRPLKLFETLVKTYKQCGSAPFVFDLLI 180
           L +HA D+I+ AIRA+   D+++C    RF+S RPL LFETLVKTY+  GSAPFVFDLLI
Sbjct: 121 LSSHAYDLIRTAIRASHQNDEENC----RFNS-RPLNLFETLVKTYRDSGSAPFVFDLLI 180

Query: 181 KALLDSKKLDPAIQIVRMLRSRGISPQIGTLNSLILCMSKCEGANAGYALFREVFGLNCE 240
           KA LDSKKLDP+I+IVRML SRGISP++ TLNSLI  + K  G + GYA++RE F L   
Sbjct: 181 KACLDSKKLDPSIEIVRMLLSRGISPKVSTLNSLISRVCKSRGVDEGYAIYREFFRL--- 240

Query: 241 IEEENVKVKARAS-----PNVHTFNTLMVCFYQDGLVGRVKEIWDQLADSNSIPNSYSYS 300
            +EEN ++  R S     PNVHT+N LM+C YQDGLV RV++IW ++   N  PN+YSYS
Sbjct: 241 -DEENNEISKRGSGFRVTPNVHTYNDLMLCCYQDGLVERVEKIWIEMK-CNYKPNAYSYS 300

Query: 301 ILMAVLCEEKRMGEAEELWEEMKMKKLEIDAVAYNTIIGGFCKAGNVRRAEEFFREMELC 360
           +LMA  C+E RMG+AE+LWEE++ +K+E D V+YNTIIGGFC  G+V RAEEFFREM + 
Sbjct: 301 VLMATFCDEGRMGDAEKLWEELRSEKIEPDVVSYNTIIGGFCTIGDVGRAEEFFREMAVA 360

Query: 361 GTESTFSTFEHLINGYCETGDVDSALLVYKDMRRKSFSLNPLMLEAITRGLCVETRLLEA 420
           G  +T ST+EHL+ GYC  GDVDSA+LVYKDM R     +   L+ + R LC + R+ E+
Sbjct: 361 GVGTTASTYEHLVKGYCNIGDVDSAVLVYKDMARSDLRPDASTLDVMIRLLCDKGRVRES 420

Query: 421 LDVFGFATEHTNFCPTMETYELLINGLCQKGKLEAAFKLQAQMVGKGFKPNSKIYQSFID 480
           L+    A    +  P  ++YE LI GLC  G++E A K+QA+MVGKGF+PNS+IY +F+D
Sbjct: 421 LEFVRCAVGKFDLIPMEKSYEALIKGLCFDGRMEEALKVQAEMVGKGFQPNSEIYGAFVD 480

Query: 481 AYSKEGNEEMVKKLGEEILEIQL 499
            Y + GNEEM + L +E+L+ Q+
Sbjct: 481 GYVRHGNEEMAEALRKEMLQNQM 485

[Close]
BLAST of CmaCh20G008610 vs. TrEMBL
Match: A0A0B2PF04_GLYSO (Pentatricopeptide repeat-containing protein OS=Glycine soja GN=glysoja_031599 PE=4 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 6.0e-143
Identity = 273/503 (54.27%), Postives = 356/503 (70.78%), Query Frame = 1 

Query: 1   MSIPLLKRSLWLIPNSTFNLPFSPSFFSSSPAAVPLPSTKPSISTVVSVLTHHRSKSRWR 60
           M+I +LK+    +    + L FS  F  S+ A+  L      ++  VS+LTHHRSKSRW 
Sbjct: 1   MAIQILKQFSQTLRPKPWTLFFS--FSCSNDASQSL------VTDAVSILTHHRSKSRWS 60

Query: 61  FLNSLCPDGFDPGEFSDIVLQIKNNSHLVLRFFLWTRSKSLCNHDLVSYSTVIHILARGR 120
            L S CP+G  P EFS+I L IKN   L LRFFLWT+SKSLCNH+L SYS++IH+LAR R
Sbjct: 61  NLRSACPNG-TPAEFSEITLHIKNKPQLALRFFLWTKSKSLCNHNLASYSSIIHLLARAR 120

Query: 121 LRTHAKDVIQNAIRATALEDDDDCSQCERFSSSRPLKLFETLVKTYKQCGSAPFVFDLLI 180
           L +HA D+I+ AIRA+   D+++C    RF+S RPL LFETLVKTY+  GSAPFVFDLLI
Sbjct: 121 LSSHAYDLIRTAIRASHQNDEENC----RFNS-RPLNLFETLVKTYRDSGSAPFVFDLLI 180

Query: 181 KALLDSKKLDPAIQIVRMLRSRGISPQIGTLNSLILCMSKCEGANAGYALFREVFGLNCE 240
           KA LDSKKLDP+I+IVRML SRGISP++ TLNSLI  + K  G + GYA++RE F L   
Sbjct: 181 KACLDSKKLDPSIEIVRMLLSRGISPKVSTLNSLISRVCKSRGVDEGYAIYREFFRL--- 240

Query: 241 IEEENVKVKARAS-----PNVHTFNTLMVCFYQDGLVGRVKEIWDQLADSNSIPNSYSYS 300
            +EEN ++  R S     PNVHT+N LM+C YQDGLV RV++IW ++   N  PN+YSYS
Sbjct: 241 -DEENNEISKRGSGFRVTPNVHTYNDLMLCCYQDGLVERVEKIWIEMK-CNYKPNAYSYS 300

Query: 301 ILMAVLCEEKRMGEAEELWEEMKMKKLEIDAVAYNTIIGGFCKAGNVRRAEEFFREMELC 360
           +LMA  C+E RMG+AE+LWEE++ +K+E D V+YNTIIGGFC  G+V RAEEFFREM + 
Sbjct: 301 VLMATFCDEGRMGDAEKLWEELRSEKIEPDVVSYNTIIGGFCTIGDVGRAEEFFREMAVA 360

Query: 361 GTESTFSTFEHLINGYCETGDVDSALLVYKDMRRKSFSLNPLMLEAITRGLCVETRLLEA 420
           G  +T ST+EHL+ GYC  GDVDSA+LVYKDM R     +   L+ + R LC + R+ E+
Sbjct: 361 GVGTTASTYEHLVKGYCNIGDVDSAVLVYKDMARSDLRPDASTLDVMIRLLCDKGRVRES 420

Query: 421 LDVFGFATEHTNFCPTMETYELLINGLCQKGKLEAAFKLQAQMVGKGFKPNSKIYQSFID 480
           L+    A    +  P  ++YE LI GLC  G++E A K+QA+MVGKGF+PNS+IY +F+D
Sbjct: 421 LEFVRCAVGKFDLIPMEKSYEALIKGLCFDGRMEEALKVQAEMVGKGFQPNSEIYGAFVD 480

Query: 481 AYSKEGNEEMVKKLGEEILEIQL 499
            Y + GNEEM + L +E+L+ Q+
Sbjct: 481 GYVRHGNEEMAEALRKEMLQNQM 484

[Close]
BLAST of CmaCh20G008610 vs. TrEMBL
Match: A0A061DXW0_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_006306 PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 1.7e-142
Identity = 260/494 (52.63%), Postives = 346/494 (70.04%), Query Frame = 1 

Query: 4   PLLKRSLWLIPNSTFNLPFSPSFFSSSPAAVPLPSTKPSISTVVSVLTHHRSKSRWRFLN 63
           P +K    L+  ++F+  FS S+ + SP +   P     I+TV S+LTHHRSKSRW  + 
Sbjct: 7   PHVKTPRLLLSLASFS--FSSSYSTPSPPSSDQPDP---IATVTSILTHHRSKSRWSTIL 66

Query: 64  SLCPDGFDPGEFSDIVLQIKNNSHLVLRFFLWTRSKSLCNHDLVSYSTVIHILARGRLRT 123
           +L P GF P +FS I LQ+KNN HL LRFFL+T  KSLCNH+L SYST+IHIL+R RL+T
Sbjct: 67  TLFPSGFTPSQFSQITLQLKNNPHLALRFFLFTEQKSLCNHNLSSYSTIIHILSRARLKT 126

Query: 124 HAKDVIQNAIRATALEDDDDCSQCERFSSSRPLKLFETLVKTYKQCGSAPFVFDLLIKAL 183
            A+++I+ AIR   +E++              LKLFE LVKTY +CGSAPFVFDL +K+ 
Sbjct: 127 RARELIRVAIRTPGMENEPTY-----------LKLFELLVKTYNECGSAPFVFDLFVKSC 186

Query: 184 LDSKKLDPAIQIVRMLRSRGISPQIGTLNSLILCMSKCEGANAGYALFREVFGLNCEIEE 243
           L  KKLD +I+IVRML SRGISPQ+ T N+LI  +SKC GA  GY +++EVFG+     E
Sbjct: 187 LQMKKLDGSIEIVRMLMSRGISPQLSTCNALIGEVSKCRGAKRGYEVYKEVFGVGNGERE 246

Query: 244 ENVKVKARASPNVHTFNTLMVCFYQDGLVGRVKEIWDQLADSNSIPNSYSYSILMAVLCE 303
            NVK   +  PNVHTFN LM+CFY++GL+ +V+E+W ++     + N YSYS+LMA LCE
Sbjct: 247 SNVKRVLKVRPNVHTFNALMLCFYREGLLEKVEEVWSEMESLGCVANGYSYSVLMAALCE 306

Query: 304 EKRMGEAEELWEEMKMKKLEIDAVAYNTIIGGFCKAGNVRRAEEFFREMELCGTESTFST 363
           E ++ EAEELWEEM++K LE D VAYNT+IGGFCK G + RAEE +REM L G ++T  T
Sbjct: 307 EGKVREAEELWEEMRVKGLEPDIVAYNTMIGGFCKHGEIMRAEELYREMGLNGIQATCVT 366

Query: 364 FEHLINGYCETGDVDSALLVYKDMRRKSFSLNPLMLEAITRGLCVETRLLEALDVFGFAT 423
           +E+LINGYC+  D+ SA+L++KDM RK F    L +EA+ RGLC + R+LEAL+    A 
Sbjct: 367 YENLINGYCKVADIYSAMLIFKDMCRKGFKPQGLTVEALVRGLCDKGRVLEALETMRVAV 426

Query: 424 EHTNFCPTMETYELLINGLCQKGKLEAAFKLQAQMVGKGFKPNSKIYQSFIDAYSKEGNE 483
                 P+ ++Y  LI GLC++ K+E A KLQA+MVGKGFKP+ +IY  FID Y ++GNE
Sbjct: 427 RVLGVYPSGKSYVFLIKGLCEERKMEEALKLQAEMVGKGFKPDPEIYDIFIDGYLRQGNE 484

Query: 484 EMVKKLGEEILEIQ 498
           +MV  L +E++E Q
Sbjct: 487 KMVTMLRKEVIETQ 484

[Close]
BLAST of CmaCh20G008610 vs. TAIR10
Match: AT2G15980.1 (AT2G15980.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 452.2 bits (1162), Expect = 4.1e-127
Identity = 230/471 (48.83%), Postives = 317/471 (67.30%), Query Frame = 1 

Query: 29  SSPAAVPLPSTKPSISTVVSVLTHHRSKSRWRFLNSLCPDGFDPGEFSDIVLQIKNNSHL 88
           SSP   P P + P IS  VS+LTHHRSKSRW  L SL P GF P +FS+I L ++NN HL
Sbjct: 31  SSP---PSPPSDPLISDAVSILTHHRSKSRWSTLRSLQPSGFTPSQFSEITLCLRNNPHL 90

Query: 89  VLRFFLWTRSKSLCNHDLVSYSTVIHILARGRLRTHAKDVIQNAIRATALEDDDDCSQCE 148
            LRFFL+TR  SLC+HD  S ST+IHIL+R RL++HA ++I+ A+R  A ++D+D     
Sbjct: 91  SLRFFLFTRRYSLCSHDTHSCSTLIHILSRSRLKSHASEIIRLALRLAATDEDED----- 150

Query: 149 RFSSSRPLKLFETLVKTYKQCGSAPFVFDLLIKALLDSKKLDPAIQIVRMLRSRGISPQI 208
                R LK+F +L+K+Y +CGSAPFVFDLLIK+ LDSK++D A+ ++R LRSRGI+ QI
Sbjct: 151 -----RVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQI 210

Query: 209 GTLNSLILCMSKCEGANAGYALFREVFGLNCEIEEENVKVKARASPNVHTFNTLMVCFYQ 268
            T N+LI  +S+  GA+ GY ++REVFGL+    +E  K+  +  PN  TFN++MV FY+
Sbjct: 211 STCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYR 270

Query: 269 DGLVGRVKEIWDQLADS-NSIPNSYSYSILMAVLCEEKRMGEAEELWEEMKMKKLEIDAV 328
           +G    V+ IW ++ +     PN YSY++LM   C    M EAE++WEEMK++ +  D V
Sbjct: 271 EGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIV 330

Query: 329 AYNTIIGGFCKAGNVRRAEEFFREMELCGTESTFSTFEHLINGYCETGDVDSALLVYKDM 388
           AYNT+IGG C    V +A+E FR+M L G E T  T+EHL+NGYC+ GDVDS L+VY++M
Sbjct: 331 AYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREM 390

Query: 389 RRKSFSLNPLMLEAITRGLCVE---TRLLEALDVFGFATEHTNFCPTMETYELLINGLCQ 448
           +RK F  + L +EA+  GLC +    R++EA D+   A     F P+   YELL+  LC+
Sbjct: 391 KRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCE 450

Query: 449 KGKLEAAFKLQAQMVGKGFKPNSKIYQSFIDAYSKEGNEEMVKKLGEEILE 496
            GK++ A  +QA+MVGKGFKP+ + Y++FID Y   G+EE    L  E+ E
Sbjct: 451 DGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSALLAIEMAE 488

[Close]
BLAST of CmaCh20G008610 vs. TAIR10
Match: AT4G26680.1 (AT4G26680.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 168.3 bits (425), Expect = 1.2e-41
Identity = 112/443 (25.28%), Postives = 197/443 (44.47%), Query Frame = 1 

Query: 37  PSTKPSISTVVSVLTHHRSKSRWRFLNSLCPDGFDPGEFSDIVLQIKNNSHLVLRFFLWT 96
           P  K      V+V   H  +S W  LN L  D  D     +++L+I+ +  L L FF W 
Sbjct: 47  PEPKGQDLDFVNVAHSHLIQSDWDKLNKLS-DHLDSFRVKNVLLKIQKDYLLSLEFFNWA 106

Query: 97  RSKSLCNHDLVSYSTVIHILARGRLRTHAKDVIQNAIRATALEDDDDCSQCERFSSSRPL 156
           ++++  +H L +++ V+H L + R    A+ ++++ +    ++               P 
Sbjct: 107 KTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVD--------------LPA 166

Query: 157 KLFETLVKTYKQCGSAPFVFDLLIKALLDSKKLDPAIQIVRMLRSRGISPQIGTLNSLIL 216
           K+F+ L+ +Y++C S P VFD L K     KK   A      ++  G  P + + N+ + 
Sbjct: 167 KVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMS 226

Query: 217 CMSKCEGANAGYALFREVFGLNCEIEEENVKVKARASPNVHTFNTLMVCFYQDGLVGRVK 276
            +      +     +RE+    C+I           SPN +T N +M  + + G + +  
Sbjct: 227 SLLGQGRVDIALRFYREM--RRCKI-----------SPNPYTLNMVMSGYCRSGKLDKGI 286

Query: 277 EIWDQLADSNSIPNSYSYSILMAVLCEEKRMGEAEELWEEMKMKKLEIDAVAYNTIIGGF 336
           E+   +          SY+ L+A  CE+  +  A +L   M    L+ + V +NT+I GF
Sbjct: 287 ELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGF 346

Query: 337 CKAGNVRRAEEFFREMELCGTESTFSTFEHLINGYCETGDVDSALLVYKDMRRKSFSLNP 396
           C+A  ++ A + F EM+         T+  LINGY + GD + A   Y+DM       + 
Sbjct: 347 CRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDI 406

Query: 397 LMLEAITRGLCVETRLLEALDVFGFATEHTNFCPTMETYELLINGLCQKGKLEAAFKLQA 456
           L   A+  GLC + +  +A   F    +  N  P   T+  LI G C +   +  F+L  
Sbjct: 407 LTYNALIFGLCKQAKTRKAAQ-FVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYK 460

Query: 457 QMVGKGFKPNSKIYQSFIDAYSK 480
            M+  G  PN + +   + A+ +
Sbjct: 467 SMIRSGCHPNEQTFNMLVSAFCR 460

[Close]
BLAST of CmaCh20G008610 vs. TAIR10
Match: AT1G62670.1 (AT1G62670.1 rna processing factor 2)

HSP 1 Score: 157.9 bits (398), Expect = 1.6e-38
Identity = 92/321 (28.66%), Postives = 164/321 (51.09%), Query Frame = 1 

Query: 175 VFDLLIKALLDSKKLDPAIQIVRMLRSRGISPQIGTLNSLILCMSKCEGANAGYALFREV 234
           +++ +I  L   K +D A+ + + + ++GI P + T +SLI C+         Y  + + 
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL-------CNYGRWSDA 317

Query: 235 FGLNCEIEEENVKVKARASPNVHTFNTLMVCFYQDGLVGRVKEIWDQLADSNSIPNSYSY 294
             L  ++ E  +      +P+V TF+ L+  F ++G +   ++++D++   +  P+  +Y
Sbjct: 318 SRLLSDMIERKI------NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 377

Query: 295 SILMAVLCEEKRMGEAEELWEEMKMKKLEIDAVAYNTIIGGFCKAGNVRRAEEFFREMEL 354
           S L+   C   R+ EA++++E M  K    D V YNT+I GFCK   V    E FREM  
Sbjct: 378 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 437

Query: 355 CGTESTFSTFEHLINGYCETGDVDSALLVYKDMRRKSFSLNPLMLEAITRGLCVETRLLE 414
            G      T+  LI G  + GD D A  ++K+M       N +    +  GLC   +L +
Sbjct: 438 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 497

Query: 415 ALDVFGFATEHTNFCPTMETYELLINGLCQKGKLEAAFKLQAQMVGKGFKPNSKIYQSFI 474
           A+ VF +  + +   PT+ TY ++I G+C+ GK+E  + L   +  KG KP+   Y + I
Sbjct: 498 AMVVFEY-LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 557

Query: 475 DAYSKEGNEEMVKKLGEEILE 496
             + ++G++E    L +E+ E
Sbjct: 558 SGFCRKGSKEEADALFKEMKE 564

[Close]
BLAST of CmaCh20G008610 vs. TAIR10
Match: AT5G39710.1 (AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 157.9 bits (398), Expect = 1.6e-38
Identity = 106/432 (24.54%), Postives = 207/432 (47.92%), Query Frame = 1 

Query: 70  FDPGEFSDIVLQIKNNSHLVLRFFLWTRSKSLCNHDLVSYSTVIHILARGRLRTHAKDVI 129
           F P   S+++L+ +N+  L+L+F  W          L      +HIL + +L   A+ ++
Sbjct: 46  FTPEAASNLLLKSQNDQALILKFLNWANPHQFFT--LRCKCITLHILTKFKLYKTAQ-IL 105

Query: 130 QNAIRATALEDDDDCSQCERFSSSRPLKLFETLVKTYKQCGSAPFVFDLLIKALLDSKKL 189
              + A  L+D+        ++S     +F++L +TY  C S   VFDL++K+      +
Sbjct: 106 AEDVAAKTLDDE--------YASL----VFKSLQETYDLCYSTSSVFDLVVKSYSRLSLI 165

Query: 190 DPAIQIVRMLRSRGISPQIGTLNSLILCMSKCEGANAGYA--LFREVFGLNCEIEEENVK 249
           D A+ IV + ++ G  P + + N+++    + +  N  +A  +F+E+             
Sbjct: 166 DKALSIVHLAQAHGFMPGVLSYNAVLDATIRSK-RNISFAENVFKEM------------- 225

Query: 250 VKARASPNVHTFNTLMVCFYQDGLVGRVKEIWDQLADSNSIPNSYSYSILMAVLCEEKRM 309
           ++++ SPNV T+N L+  F   G +     ++D++     +PN  +Y+ L+   C+ +++
Sbjct: 226 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 285

Query: 310 GEAEELWEEMKMKKLEIDAVAYNTIIGGFCKAGNVRRAEEFFREMELCGTESTFSTFEHL 369
            +  +L   M +K LE + ++YN +I G C+ G ++       EM   G      T+  L
Sbjct: 286 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 345

Query: 370 INGYCETGDVDSALLVYKDMRRKSFSLNPLMLEAITRGLCVETRLLEALDVFGFATEHTN 429
           I GYC+ G+   AL+++ +M R   + + +   ++   +C    +  A++ F        
Sbjct: 346 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME-FLDQMRVRG 405

Query: 430 FCPTMETYELLINGLCQKGKLEAAFKLQAQMVGKGFKPNSKIYQSFIDAYSKEGNEEMVK 489
            CP   TY  L++G  QKG +  A+++  +M   GF P+   Y + I+ +   G  E   
Sbjct: 406 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 447

Query: 490 KLGEEILEIQLS 500
            + E++ E  LS
Sbjct: 466 AVLEDMKEKGLS 447

[Close]
BLAST of CmaCh20G008610 vs. TAIR10
Match: AT1G63400.1 (AT1G63400.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 156.8 bits (395), Expect = 3.6e-38
Identity = 90/321 (28.04%), Postives = 164/321 (51.09%), Query Frame = 1 

Query: 175 VFDLLIKALLDSKKLDPAIQIVRMLRSRGISPQIGTLNSLILCMSKCEGANAGYALFREV 234
           ++  +I +L   +  D A+ +   + ++G+ P + T +SLI C+   E  +    L  ++
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321

Query: 235 FGLNCEIEEENVKVKARASPNVHTFNTLMVCFYQDGLVGRVKEIWDQLADSNSIPNSYSY 294
                        ++ + +PNV TFN L+  F ++G +   ++++D++   +  P+ ++Y
Sbjct: 322 -------------IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 381

Query: 295 SILMAVLCEEKRMGEAEELWEEMKMKKLEIDAVAYNTIIGGFCKAGNVRRAEEFFREMEL 354
           S L+   C   R+ EA+ ++E M  K    + V YNT+I GFCKA  +    E FREM  
Sbjct: 382 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ 441

Query: 355 CGTESTFSTFEHLINGYCETGDVDSALLVYKDMRRKSFSLNPLMLEAITRGLCVETRLLE 414
            G      T+  LI+G+ +  D D+A +V+K M       N +    +  GLC   +L +
Sbjct: 442 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 501

Query: 415 ALDVFGFATEHTNFCPTMETYELLINGLCQKGKLEAAFKLQAQMVGKGFKPNSKIYQSFI 474
           A+ VF +  + +   PT+ TY ++I G+C+ GK+E  + L   +  KG KP+  IY + I
Sbjct: 502 AMVVFEY-LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 561

Query: 475 DAYSKEGNEEMVKKLGEEILE 496
             + ++G +E    L  ++ E
Sbjct: 562 SGFCRKGLKEEADALFRKMRE 568

[Close]
BLAST of CmaCh20G008610 vs. NCBI nr
Match: gi|659118717|ref|XP_008459266.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g15980 [Cucumis melo])

HSP 1 Score: 827.8 bits (2137), Expect = 1.0e-236
Identity = 413/499 (82.77%), Postives = 447/499 (89.58%), Query Frame = 1 

Query: 1   MSIPLLKRSLWLIPNSTFNLPFSPSFFSSSPAAVPLPSTKPSISTVVSVLTHHRSKSRWR 60
           MS PLLKR+L  I NST NL FS SFFSSSP A P PSTKPSISTVVSVLTH RSKSRWR
Sbjct: 1   MSGPLLKRTLRPIGNSTVNLQFSSSFFSSSPPAEPSPSTKPSISTVVSVLTHQRSKSRWR 60

Query: 61  FLNSLCPDGFDPGEFSDIVLQIKNNSHLVLRFFLWTRSKSLCNHDLVSYSTVIHILARGR 120
           FLNSLCP+GFDPGEFSDIVLQIKNN HL LRFFLWT++KSLCNH+L+SYST+IHILARGR
Sbjct: 61  FLNSLCPNGFDPGEFSDIVLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR 120

Query: 121 LRTHAKDVIQNAIRATALEDDDDCSQCERFSSSRPLKLFETLVKTYKQCGSAPFVFDLLI 180
           LRTHAKDVIQ AIRA  LED D+ S+ ERFSSSRPLKLFETLVKTYK+CGSAPFVFDLLI
Sbjct: 121 LRTHAKDVIQTAIRAAELEDSDNYSESERFSSSRPLKLFETLVKTYKRCGSAPFVFDLLI 180

Query: 181 KALLDSKKLDPAIQIVRMLRSRGISPQIGTLNSLILCMSKCEGANAGYALFREVFGLNCE 240
           KALLDSKKLD +I+IVRMLRSRGISPQ+ TLNSLIL +SKC+GAN  YA+F EVFGL+CE
Sbjct: 181 KALLDSKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFTEVFGLDCE 240

Query: 241 IEEENVKVKARASPNVHTFNTLMVCFYQDGLVGRVKEIWDQLADSNSIPNSYSYSILMAV 300
           IE+E+VK+K R SPNVHTFNTLM CFYQDG VGRVKEIWDQLADSNSIPNSYSYSILMAV
Sbjct: 241 IEKEHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADSNSIPNSYSYSILMAV 300

Query: 301 LCEEKRMGEAEELWEEMKMKKLEIDAVAYNTIIGGFCKAGNVRRAEEFFREMELCGTEST 360
           LCEEKRMGEAEELWEEMKMKKLE+D VAYNTIIGGFCKAGN +RAEEF+REMEL G EST
Sbjct: 301 LCEEKRMGEAEELWEEMKMKKLELDVVAYNTIIGGFCKAGNAQRAEEFYREMELSGIEST 360

Query: 361 FSTFEHLINGYCETGDVDSALLVYKDMRRKSFSLNPLMLEAITRGLCVETRLLEALDVFG 420
           FST EHLINGYC+TGDVDSALLVYKDMRRK FSLN   LE +   LC E RLLEALDVFG
Sbjct: 361 FSTLEHLINGYCDTGDVDSALLVYKDMRRKRFSLNASTLEGLIEVLCAERRLLEALDVFG 420

Query: 421 FATEHTNFCPTMETYELLINGLCQKGKLEAAFKLQAQMVGKGFKPNSKIYQSFIDAYSKE 480
           FA E ++FCPTMET+E+LIN LCQ+GK+E AFKLQAQMVGKGFKPN KIYQSFIDAY KE
Sbjct: 421 FAVEDSSFCPTMETFEVLINWLCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAYMKE 480

Query: 481 GNEEMVKKLGEEILEIQLS 500
           GN EMV+KLG+E+ EIQLS
Sbjct: 481 GNAEMVEKLGKEMHEIQLS 499

[Close]
BLAST of CmaCh20G008610 vs. NCBI nr
Match: gi|449455312|ref|XP_004145397.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g15980 [Cucumis sativus])

HSP 1 Score: 808.1 bits (2086), Expect = 8.4e-231
Identity = 403/499 (80.76%), Postives = 441/499 (88.38%), Query Frame = 1 

Query: 1   MSIPLLKRSLWLIPNSTFNLPFSPSFFSSSPAAVPLPSTKPSISTVVSVLTHHRSKSRWR 60
           MS PLLKR+L  I NST +L FS SF SSSP   P PSTKPSISTVVSVLTH RSKSRWR
Sbjct: 1   MSGPLLKRTLRPIGNSTVHLQFSSSFSSSSPPTDPSPSTKPSISTVVSVLTHQRSKSRWR 60

Query: 61  FLNSLCPDGFDPGEFSDIVLQIKNNSHLVLRFFLWTRSKSLCNHDLVSYSTVIHILARGR 120
           FLNSLCP+GFDPGEFSDI+LQIKNN HL LRFFLWT++KSLCNH+L+SYST+IHILARGR
Sbjct: 61  FLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR 120

Query: 121 LRTHAKDVIQNAIRATALEDDDDCSQCERFSSSRPLKLFETLVKTYKQCGSAPFVFDLLI 180
           LRTHAKDVIQ AIRA  LED D+ S+ ERFS SRPLKLFETLVKTYK+CGSAPFVFDLLI
Sbjct: 121 LRTHAKDVIQTAIRAAQLEDSDNYSKTERFSPSRPLKLFETLVKTYKRCGSAPFVFDLLI 180

Query: 181 KALLDSKKLDPAIQIVRMLRSRGISPQIGTLNSLILCMSKCEGANAGYALFREVFGLNCE 240
           KALLDSKKLD +I+IVRMLRSRGISPQ+ TLNSLIL +SKC+GAN  YA+FREVFGL+CE
Sbjct: 181 KALLDSKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREVFGLDCE 240

Query: 241 IEEENVKVKARASPNVHTFNTLMVCFYQDGLVGRVKEIWDQLADSNSIPNSYSYSILMAV 300
           IEEE+VK+K R SPNVHTFNTLM CFY+DG  GRVKEIWDQLADSNS PNSYSYSILM V
Sbjct: 241 IEEEHVKLKGRVSPNVHTFNTLMDCFYRDGFAGRVKEIWDQLADSNSTPNSYSYSILMTV 300

Query: 301 LCEEKRMGEAEELWEEMKMKKLEIDAVAYNTIIGGFCKAGNVRRAEEFFREMELCGTEST 360
           LCEEKR GEAEELWEEMKMKKLE D VAYNTIIGGFCKAG+  RAEEF+REMEL G EST
Sbjct: 301 LCEEKRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMELSGIEST 360

Query: 361 FSTFEHLINGYCETGDVDSALLVYKDMRRKSFSLNPLMLEAITRGLCVETRLLEALDVFG 420
           FST EHLINGYC+TGDVDSALLVYKDMRRK FSLN   LE + R LC E RLLEALDVFG
Sbjct: 361 FSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASTLEGLIRMLCAERRLLEALDVFG 420

Query: 421 FATEHTNFCPTMETYELLINGLCQKGKLEAAFKLQAQMVGKGFKPNSKIYQSFIDAYSKE 480
           FA E+++FCPTMET+E+LIN LCQ+GK+E AFKLQAQMVG+GFKPN KIYQSFIDAY+KE
Sbjct: 421 FAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGRGFKPNLKIYQSFIDAYTKE 480

Query: 481 GNEEMVKKLGEEILEIQLS 500
           GN EMV+KL +E+ EIQLS
Sbjct: 481 GNAEMVEKLWKEMHEIQLS 499

[Close]
BLAST of CmaCh20G008610 vs. NCBI nr
Match: gi|1009165036|ref|XP_015900823.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g15980-like [Ziziphus jujuba])

HSP 1 Score: 588.2 bits (1515), Expect = 1.4e-164
Identity = 298/499 (59.72%), Postives = 380/499 (76.15%), Query Frame = 1 

Query: 1   MSIPLLKRSLWLIPNSTFNLPFSPSFFSSSPAAVPLPSTKPSISTVVSVLTHHRSKSRWR 60
           M+I +L R L+ IP    + PFS S FSSSPA+     +   I TVVSVLTHHRSKSRW 
Sbjct: 1   MAISILNRFLFPIPK---HKPFSLSSFSSSPAS---DQSNSLIPTVVSVLTHHRSKSRWN 60

Query: 61  FLNSLCPDGFDPGEFSDIVLQIKNNSHLVLRFFLWTRSKSLCNHDLVSYSTVIHILARGR 120
           +L S+ PDGFDP +FS I LQ+KNN HLVLRFFLWT++KSLCNH+L+SYST IHILARGR
Sbjct: 61  YLRSIYPDGFDPTQFSQISLQLKNNPHLVLRFFLWTQTKSLCNHNLLSYSTTIHILARGR 120

Query: 121 LRTHAKDVIQNAIRATALEDDDDCSQCERFS-SSRPLKLFETLVKTYKQCGSAPFVFDLL 180
           L+  A+ +++++IR    E  +     E F   S+PLK+FE+LVKTY QCGSAPFVFDLL
Sbjct: 121 LKGQAQLLMKDSIRLHGSEGHEG----EDFDLESKPLKVFESLVKTYTQCGSAPFVFDLL 180

Query: 181 IKALLDSKKLDPAIQIVRMLRSRGISPQIGTLNSLILCMSKCEGANAGYALFREVFGLNC 240
           +KA L+SKK+DP+IQIVRML SRGISP++ T N LI  +S C GA+AGYA++REVFGL+C
Sbjct: 181 LKACLESKKIDPSIQIVRMLMSRGISPKVNTCNCLIRQISLCRGAHAGYAIYREVFGLDC 240

Query: 241 EIEEENVKVKARASPNVHTFNTLMVCFYQDGLVGRVKEIWDQLADSNSIPNSYSYSILMA 300
            I E+NVK  +R  PNV T NTLMV FYQDGLV +VKEIWDQ+ + N  P+ YSYSILMA
Sbjct: 241 GIGEQNVKWVSRFRPNVQTLNTLMVGFYQDGLVEKVKEIWDQMKELNCNPDGYSYSILMA 300

Query: 301 VLCEEKRMGEAEELWEEMKMKKLEIDAVAYNTIIGGFCKAGNVRRAEEFFREMELCGTES 360
             C+E +M EAE+ W+EM  KK++ D VAYNT+IGGFC+ G + RAEEFFREM L G ES
Sbjct: 301 AYCDEGKMDEAEDSWDEMVAKKVQPDVVAYNTMIGGFCRIGEIERAEEFFREMALNGIES 360

Query: 361 TFSTFEHLINGYCETGDVDSALLVYKDMRRKSFSLNPLMLEAITRGLCVETRLLEALDVF 420
           T +T+EHLINGYC+ G+V+S+ LVY+DMRRK F  +   +EA+ RG C + R+LEAL++ 
Sbjct: 361 TTTTYEHLINGYCKIGNVESSKLVYEDMRRKDFRPSASTMEALVRGFCDKNRVLEALEIL 420

Query: 421 GFATEHTNFCPTMETYELLINGLCQKGKLEAAFKLQAQMVGKGFKPNSKIYQSFIDAYSK 480
             A  H ++CPT ++YE+LI GLCQ+GK+E A KLQA+MVGKGFKPNS+IY +FI  Y K
Sbjct: 421 NGAIRHFDYCPTGKSYEILITGLCQEGKMEEALKLQAKMVGKGFKPNSEIYNAFICGYMK 480

Query: 481 EGNEEMVKKLGEEILEIQL 499
           +GN E+   L ++++E Q+
Sbjct: 481 QGNIEVADLLRKDMVETQM 489

[Close]
BLAST of CmaCh20G008610 vs. NCBI nr
Match: gi|1009168839|ref|XP_015902880.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g15980-like [Ziziphus jujuba])

HSP 1 Score: 583.2 bits (1502), Expect = 4.4e-163
Identity = 298/501 (59.48%), Postives = 380/501 (75.85%), Query Frame = 1 

Query: 1   MSIPLLKRSLWLIPNSTFNLPFSPSFFSSSPAAVPLPSTKPSISTVVSVLTHHRSKSRWR 60
           M+I +L R L+ IP    + PFS S FSSSPA+     +   I TVVSVLTHHRSKSRW 
Sbjct: 1   MAISILNRFLFPIPK---HKPFSLSSFSSSPAS---DQSNSLIPTVVSVLTHHRSKSRWN 60

Query: 61  FLNSLCPDGFDPGEFSDIVLQIKNNSHLVLRFFLWTRSKSLCNHDLVSYSTVIHILARGR 120
           +L S+ PDGFDP +FS I LQ+KNN HLVLRFFLWT++KSLCNH+L+SYST IHILARGR
Sbjct: 61  YLRSIYPDGFDPTQFSQISLQLKNNPHLVLRFFLWTQTKSLCNHNLLSYSTTIHILARGR 120

Query: 121 LRTHAKDVIQNAIRATALEDDDDCSQCERFS-SSRPLKLFETLVKTYKQCGSAPFVFDLL 180
           L+  A+ +++++IR    E  +     E F   S+PLK+FE+LVKTY QCGSAPFVFDLL
Sbjct: 121 LKGQAQLLMKDSIRLHGSEGHEG----EDFDLESKPLKVFESLVKTYTQCGSAPFVFDLL 180

Query: 181 IKALLDSKKLDPAIQIVRMLRSRGISPQIGTLNSLILCMSKCEGANAGYALFREVFGLNC 240
           +KA L+SKK+DP+IQIVRML SRGISP++ T N LI  +S C GA+AGYA++REVFGL+C
Sbjct: 181 LKACLESKKIDPSIQIVRMLMSRGISPKVNTCNCLIRQISLCRGAHAGYAIYREVFGLDC 240

Query: 241 EIEEENVKVKARASPNVHTFNTLMVCFYQDGLVGRVKEIWDQLADSNSIPNSYSYSILMA 300
            I E+NVK  +R  PNV T NTLMV FYQDGLV +VKEIWDQ+ + N  P+ YSYSILMA
Sbjct: 241 GIGEQNVKWVSRFRPNVQTLNTLMVGFYQDGLVEKVKEIWDQMKELNCNPDGYSYSILMA 300

Query: 301 VLCEEKRMGEAEELWEEMKMKKLEIDAVAYNTIIGGFCKAGNVRRAEEFFREMELCGTES 360
             C+E +M EAE+ W+EM  KK++ D VAYNT+IGGFC+ G + RAEEFFREM L G ES
Sbjct: 301 AYCDEGKMDEAEDSWDEMVAKKVQPDVVAYNTMIGGFCRIGEIERAEEFFREMALNGIES 360

Query: 361 TFSTFEHLINGYCETGDVDSALLVYKDMRRKSFSLNPLMLEAITRGLCVE--TRLLEALD 420
           T +T+EHLINGYC+ G+V+S+ LVY+DMRRK F  +   +EA+ RG C +   R+LEAL+
Sbjct: 361 TTTTYEHLINGYCKIGNVESSKLVYEDMRRKDFRPSASTMEALVRGFCDKNRNRVLEALE 420

Query: 421 VFGFATEHTNFCPTMETYELLINGLCQKGKLEAAFKLQAQMVGKGFKPNSKIYQSFIDAY 480
           +   A  H ++CPT ++YE+LI GLCQ+GK+E A KLQA+MVGKGFKPNS+IY +FI  Y
Sbjct: 421 ILNGAIRHFDYCPTGKSYEILITGLCQEGKMEEALKLQAKMVGKGFKPNSEIYNAFICGY 480

Query: 481 SKEGNEEMVKKLGEEILEIQL 499
            K+GN E+   L ++++E Q+
Sbjct: 481 MKQGNIEVADLLRKDMVETQM 491

[Close]
BLAST of CmaCh20G008610 vs. NCBI nr
Match: gi|645262376|ref|XP_008236735.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g15980 [Prunus mume])

HSP 1 Score: 572.0 bits (1473), Expect = 1.0e-159
Identity = 292/496 (58.87%), Postives = 367/496 (73.99%), Query Frame = 1 

Query: 1   MSIPLLKRSLWLIPNSTFNLPFSPSFFSSSPAAVPLPS-TKPSISTVVSVLTHHRSKSRW 60
           M+  +LKR+L+    +T   P S S FSSS  +   PS T P IS VVS+LT+ RSK+RW
Sbjct: 1   MAFQILKRNLF---PATKPRPLSVSHFSSSSPSDQTPSQTNPLISDVVSILTNLRSKTRW 60

Query: 61  RFLNSLCPDGFDPGEFSDIVLQIKNNSHLVLRFFLWTRSKSLCNHDLVSYSTVIHILARG 120
            +L SL P+GFD  +FS I L IKNN  L LRFFLWT+ KSLCNH+L S+ST+IHILARG
Sbjct: 61  SYLRSLYPNGFDSNDFSQIALHIKNNPRLALRFFLWTQHKSLCNHNLQSHSTIIHILARG 120

Query: 121 RLRTHAKDVIQNAIRATALEDDDDCSQCERFSSSRPLKLFETLVKTYKQCGSAPFVFDLL 180
           RLR+ A D+I+ AIR +  E             S PLK+FE+LVKTY+QC SAPFVFDLL
Sbjct: 121 RLRSQAYDLIRTAIRVSESESIGS-------HESEPLKVFESLVKTYRQCDSAPFVFDLL 180

Query: 181 IKALLDSKKLDPAIQIVRMLRSRGISPQIGTLNSLILCMSKCEGANAGYALFREVFGLNC 240
           IKA L+SKK+DPAIQIVRML SRGISP + T N+LI  +S+  GA AGY  +RE+FGL+C
Sbjct: 181 IKACLESKKIDPAIQIVRMLLSRGISPGLSTCNALIRLLSQRRGAYAGYETYREIFGLDC 240

Query: 241 EIEEENVKVKARASPNVHTFNTLMVCFYQDGLVGRVKEIWDQLADSNSIPNSYSYSILMA 300
           E+ E NVK  AR SP+V TFN LM+ FYQDGLV +VKEIWDQ+AD N  PN YSYSILMA
Sbjct: 241 EVLEHNVKRVARISPSVETFNALMLGFYQDGLVEKVKEIWDQMADLNCCPNGYSYSILMA 300

Query: 301 VLCEEKRMGEAEELWEEMKMKKLEIDAVAYNTIIGGFCKAGNVRRAEEFFREMELCGTES 360
             CE+++M EAEE+WEEM+ K LE D VAYNT+IGGFC+ G +  AEEF +EM L G ES
Sbjct: 301 AYCEQEKMNEAEEVWEEMRAKGLEPDVVAYNTMIGGFCRVGEIEMAEEFSKEMGLSGIES 360

Query: 361 TFSTFEHLINGYCETGDVDSALLVYKDMRRKSFSLNPLMLEAITRGLCVETRLLEALDVF 420
           T +T+EHLI GYC+ G++D+A+L+YKDM RK F      ++++ RGLC E+R+LEA +V 
Sbjct: 361 TDATYEHLITGYCKMGNLDAAMLLYKDMLRKDFRPEGSTMDSLIRGLCDESRVLEAFEVM 420

Query: 421 GFATEHTNFCPTMETYELLINGLCQKGKLEAAFKLQAQMVGKGFKPNSKIYQSFIDAYSK 480
             A  H  FCPT ++YE LI GLC++GKLE A KLQA+MVGKGFKPNS+IY +FI  Y K
Sbjct: 421 RGAVVHFGFCPTEKSYEFLIRGLCEEGKLEEALKLQAEMVGKGFKPNSEIYSAFISGYMK 480

Query: 481 EGNEEMVKKLGEEILE 496
           +GN+E+ ++L  E+L+
Sbjct: 481 QGNKEVAERLRNEMLD 486

The following BLAST results are available for this feature:
BLAST of CmaCh20G008610 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP155_ARATH7.3e-12648.83Pentatricopeptide repeat-containing protein At2g15980 OS=Arabidopsis thaliana GN... [more]
PP338_ARATH2.1e-4025.28Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidop... [more]
PPR91_ARATH2.9e-3728.66Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop... [more]
PP407_ARATH2.9e-3724.54Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN... [more]
PP102_ARATH6.3e-3728.04Pentatricopeptide repeat-containing protein At1g63400 OS=Arabidopsis thaliana GN... [more]
BLAST of CmaCh20G008610 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIN1_CUCSA5.8e-23180.76Uncharacterized protein OS=Cucumis sativus GN=Csa_2G239400 PE=4 SV=1[more]
M5VVR2_PRUPE2.7e-15958.47Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004794mg PE=4 SV=1[more]
A0A0R0HG21_SOYBN2.4e-14454.27Uncharacterized protein OS=Glycine max GN=GLYMA_11G122100 PE=4 SV=1[more]
A0A0B2PF04_GLYSO6.0e-14354.27Pentatricopeptide repeat-containing protein OS=Glycine soja GN=glysoja_031599 PE... [more]
A0A061DXW0_THECC1.7e-14252.63Tetratricopeptide repeat (TPR)-like superfamily protein, putative isoform 1 OS=T... [more]
BLAST of CmaCh20G008610 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G15980.14.1e-12748.83 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G26680.11.2e-4125.28 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G62670.11.6e-3828.66 rna processing factor 2[more]
AT5G39710.11.6e-3824.54 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G63400.13.6e-3828.04 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CmaCh20G008610 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659118717|ref|XP_008459266.1|1.0e-23682.77PREDICTED: pentatricopeptide repeat-containing protein At2g15980 [Cucumis melo][more]
gi|449455312|ref|XP_004145397.1|8.4e-23180.76PREDICTED: pentatricopeptide repeat-containing protein At2g15980 [Cucumis sativu... [more]
gi|1009165036|ref|XP_015900823.1|1.4e-16459.72PREDICTED: pentatricopeptide repeat-containing protein At2g15980-like [Ziziphus ... [more]
gi|1009168839|ref|XP_015902880.1|4.4e-16359.48PREDICTED: pentatricopeptide repeat-containing protein At2g15980-like [Ziziphus ... [more]
gi|645262376|ref|XP_008236735.1|1.0e-15958.87PREDICTED: pentatricopeptide repeat-containing protein At2g15980 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh20G008610.1CmaCh20G008610.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 363..391
score: 2.
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 321..353
score: 1.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 433..479
score: 4.0E-10coord: 254..302
score: 5.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 292..325
score: 2.2E-7coord: 363..395
score: 2.8E-7coord: 434..467
score: 6.3E-7coord: 327..356
score: 2.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 431..465
score: 11.696coord: 255..289
score: 8.78coord: 105..135
score: 5.897coord: 290..324
score: 10.841coord: 207..241
score: 5.492coord: 395..430
score: 5.503coord: 325..359
score: 12.255coord: 172..206
score: 9.054coord: 466..499
score: 7.3coord: 360..394
score: 10
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 154..498
score: 2.3E-151coord: 6..119
score: 2.3E
NoneNo IPR availablePANTHERPTHR24015:SF499SUBFAMILY NOT NAMEDcoord: 154..498
score: 2.3E-151coord: 6..119
score: 2.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh20G008610Cucsa.109790Cucumber (Gy14) v1cgycmaB0253
CmaCh20G008610Cla010303Watermelon (97103) v1cmawmB509
CmaCh20G008610Csa2G239400Cucumber (Chinese Long) v2cmacuB542
CmaCh20G008610MELO3C021959Melon (DHL92) v3.5.1cmameB495
CmaCh20G008610ClCG09G017910Watermelon (Charleston Gray)cmawcgB474
CmaCh20G008610CSPI02G11990Wild cucumber (PI 183967)cmacpiB547
CmaCh20G008610CmoCh20G008710Cucurbita moschata (Rifu)cmacmoB551
CmaCh20G008610Lsi10G003470Bottle gourd (USVL1VR-Ls)cmalsiB507
CmaCh20G008610MELO3C021959.2Melon (DHL92) v3.6.1cmamedB575
CmaCh20G008610CsaV3_2G014520Cucumber (Chinese Long) v3cmacucB0651
CmaCh20G008610Cla97C09G179320Watermelon (97103) v2cmawmbB598
CmaCh20G008610CsGy2G012030Cucumber (Gy14) v2cgybcmaB218
CmaCh20G008610Carg23638Silver-seed gourdcarcmaB1104
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh20G008610Cucurbita maxima (Rimu)cmacmaB469
CmaCh20G008610Cucurbita maxima (Rimu)cmacmaB446
CmaCh20G008610Cucurbita moschata (Rifu)cmacmoB548
CmaCh20G008610Cucurbita moschata (Rifu)cmacmoB554
CmaCh20G008610Cucumber (Chinese Long) v2cmacuB546
CmaCh20G008610Watermelon (Charleston Gray)cmawcgB485
CmaCh20G008610Watermelon (97103) v1cmawmB526
CmaCh20G008610Cucurbita pepo (Zucchini)cmacpeB561
CmaCh20G008610Cucurbita pepo (Zucchini)cmacpeB565
CmaCh20G008610Cucurbita pepo (Zucchini)cmacpeB585
CmaCh20G008610Bottle gourd (USVL1VR-Ls)cmalsiB514
CmaCh20G008610Melon (DHL92) v3.6.1cmamedB588
CmaCh20G008610Silver-seed gourdcarcmaB1232
CmaCh20G008610Watermelon (97103) v2cmawmbB570
CmaCh20G008610Wax gourdcmawgoB0682
CmaCh20G008610Wax gourdcmawgoB0684