CmaCh20G008290 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh20G008290
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Zinc ion binding protein
Location	Cma_Chr20 : 3943916 .. 3948897 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATTTCTCCCTCTAAAACTCTCTCTCTCTCTCTCGAGTTTGGGATTGGGCTCTGTGAAGGTACGCTTTAGATCATTTCGGTGTATATTGATTGCTTTTGTTTGAACTAATGGAGTTTCAGATTCTAATGAGGCCTTTGTTTTTTTGTTTGTTTTCATTAGTTTGGAGGTTTTCAGTATTAAGTTTTTGGTTTTGTATGTTTAGTTTTTTAATTTTTAATTTTTATTTTTTATGGTGGCATTTGATTGAATTTGTTTGCGTATTGTATGCTAATTGTTCGGATCTCGCTGACTTGTTTAAGCGATTGAATCTCTGTTTTTCCTTTTCGAAGTTCTAATTTTAGGGTTTTCAATTTAGACTTACTCACAGCTTCCACAAATTTTGCAGATTGAACCGAATCTGTGTCCATTTATTCCGTGAAAAGAAGAGTTTCTTGTGCGGTTGTGTTTGTCTGTGTTTTCAGTGAGTGTGATTAATTAGTACCAAAACCGATTGGGTGAAGGTAGAAACTCGACGCGTTTGTAATGGAGGATGTTTTTTATTGGAAGTCCCGGTTTGCTTAAAGAACTAGGAAAAGCTTAGGATTTCCATCTTATGGTCGATGTGCTTTCTTGTGTGGTGGTGATCATATAGTGATTTGGAAATGGGAATCGAAATCCAAGAATTTATATCCCATCGGGTAACTTTTGTGTACTCCAAATGTTATTTCTTCAGTTTAGGAGATGCTTTTGTCTGAACTTTGAGAATCACGTTTGTTTTTGTTCTATTTTTAGTTGGAAAAGGTTCGTGTAGTTAAGTTATATTGGATTAAGGGGTTTTGATCAAATGATATTATTACATTGAAAAATTTAGGTGGTTTTCTATGATTTGTGGATGGGTTTCTGTATATTCTAGTGTTTACATCGTTTCCTGGCCTTATAGTCCTATCTTATGATAATCTCTGTTTATCATGATTTTAGACAAAATACAGTTTGGCGTTTCCTTGAGAGGCATGGTGCTGGGGTTATTCTCAAAGTTCTACGTTTGAAGATCTTCAGCAACTCTTGTGGCGAAGTCATAAAAACCAAAATCTTGGTCCTTCTCCAGCATGGGATCTGCGTGTTGTGTTGCTGCTAGGGAAAATACTATAGTTAGTGGATCTGGAAGTGAAACCTTATGTAGGAATATGAGGTATTCTCCTAGTTGGAGCTTTCGATGGGATAATCGTGGACGAGTAGCTGGCGAAGAGACTTCGATAAATTGGTTTTCTGATGGTGTTAGTCGCAATGATAGTCCACTTGAACATCTCCGTAGACGTACATGGCAAAAGTCTCCACCGCCAGAAGGCACAACTAATAATTTGAGGACTCCTAGTTCAGGTAATCACCCAGATGGTAGGATTTAAAAGTTTTTAAATTCGAATATAACTCTGAAAAATCTTACTTTTTCATTCCCCTTTATATTCTCCATTTGATTTTGCATTTTTCAGTCTCCTGTTTTTAACAAGTATGCATGCACGGAACTCTTTGTTAATTTATTTTCAATCTCATCAGTTAAAGAACCTAGATCTTAGTTATTGTTTAAAACCAATAAAGCATGAACATCAATGAAGATATGACTGAAATTCCATGGACACAATGTCGCTTCTAAAATAATAGAAGGGAGTACTTGAAAGATTATACTCGACTCTGTCTCACCTGAGCAAGCAAAAGAACATGGGAGAACAACTAAACCTCTAACTGGCACCTGCCACATAGCTAGCAAAACATGTAGGTCTCTAATTATTACAACTTCTGGTTACTCTAGTTTGTTTTGTTCTGTGGCTCAGTCTTTTCGTCTCTTTCTGATTTTTGTGTGTAGGCATTTTTTCTATTTTGCATCGAACATCAAATGGAAAATTCCTGCTCTTTTGGAATGCATGGTTAACCGAACTAGCTTTTTGGTTATGTTTTTTTTTATTGAAGATATGTAGTACGGGTGTATTAATTATTAAAATGATTGATGTAACCGAGAGGGACCGACATGATTAGCATTAGTTCATTCTGAAGAGTGATGAAATCAGTCGTAGAAAAACTGATTGATTGGTTGGTGACCCTTGTTAATAACGCATTGCTAATTTTCTTTTTGTTCAAACCTCACTTTCACTCACTCTCTCAACTACATCTCCCTCTCGTTCTTACTATAAGTGCTCCTCTACCCAACTTTATAACCTTTATCAGTACCTTCATTTTATCTTTTACACATCACTTTCTATATCGCAAGTTCTTCCTATTAGCACTGCTCCACCCTGCCTCACCTACCCCATTACTCTCATTACTATCCCCATGGTTAACCGAACTAGCTTTTTAGTTTGAGGTTGAGGGTTCGAGTCCCTCCTTCCGCTCAAGGCTTTGTCGTTTAGTGGTAACGAGTAGAGTGCATAAGCACTCTTAGAAACAGGGGCAAGCTGCACCCCTTGTATAGGGGTTCCAAACCAATGTTTTCTTTGTTGAAAATATGTGGTGGGGGTGAATTAATTATTAAAAGGACTGATCAAACCGAGAGGGACCAACATGATTAGCATTAGTTCATTCTTACGAGTGATGAAATCATTTGTAGACATATTGATTGGTTGGTTGGTGACCCTTGTTAATAATGCATTGCTATTTTTCTTCTTTTTCAAATCTCACCTTTCATTTATTCTCTCAACTTAGTCTCCCTTCATTCTTACTATAAGTGCTTCTCTACCATACTTTTATCACCTCTATCAGTACCAGCATTTTTTCTCTCATCCTTTCACTTTCAATATCGCTCGTTCTTCCTACCAGCACTGCTCCTCCCTGCCTCACCCACCCCATTATTCTCATTTCTACCTCCATTTTTTCTCGAATCCTTTCGCTCTCCACTGCTCATTCTTCCTATCAGCACCACCCACCAACACCGTTATCTCTCTCTCTTGCGTTGCAGTTTAATTTGTCTATTGCCCTTCTCTAATCAATATTGTTTACCCATGCATAACCAGTAACAGCTGCTCAATTTGGAGTCTGCCTACCTATTGCAAGAGCTAAAGTTCAGTCTATAAGTCTTCATAAACCGTCGGAAATCATCAGTTTCTATCTTATCTGTGCAGTTTGGTCTTTTTGGTTTTAACCCTACTTAACTAAATCCAACCACGTTTAATCCTTAATGTGTGCAACTTGCAAGTTTGTGCAAATTGAACAGACAAAGGTTTGAAGAAAATGAAGTTTTTTTTTTTCATTTTTTCATTTTTTTGGGTAGGGGGGCGGTTGAGGTTGTATTTCCAGATAATAATTCATGGTATCCAATTATGGAGTTTATTTCCTTAAATTTGTTTTTATCAATGTTTATTAAATTAGTGGTATTATTCTTGGTTTTTGCTCTTACTGAGATTCTTATTTTGCTGACAAATAACTGAGAAAAATGGTTTATTAATGGTACTTTCTATAAAACCTTATGGATACAAGATGGTACCTTCTACAAATTAAACTTGTTCAATTGAGGATTCTTGCAAATACTTTGTTTCTCCCCTCCACCTGATTAAATGGTTTAATTACCAGTTTAAAAACAGTTAGCCTTTTTATTGTGTTCATGTCTCACATCAGCTAGTTGTTCATGGCAGGTCAATCAAATTCACGGAATGTATCAACAGATGTGAGTTTAGAACAGGTAACATAAGGTCTTTTCCAGTTAAGTTTTTCTAAACCCGTCTATAGTCCATTAAGATGCAATTTTCTCTGTTCCAAGCAGGTGAAGGAGGCTATGGATTCTCCCACAGCCTCATATAAGTCTCCTGCAAAATTGTCACTTTCATTGCCTTCAACTTCATCTTTGTCAACCTCTCCTTTATCATCACAGAGCTATCTGCCTCCAACCAATTCATCCCTAACAAGATGTACCCATCGATCTCCAGGACATCAGCTGTTGCGTCAAGGTTCTGACAACCGAATCCGAGGATTAAAATCACCAGGTAGCTATTTAGCTTCTGAAGATAGACCAAGGCTTCCCTCTTGGAGCAACGAATCGGTCCGTGACTCACATGGAGGGTCTTCAGATTGTTGGTCTGTCCATGCTTTCTCTGAGCTCATGGCCACTTCTCATCGAGAAAGATGGTCTTTTGATAGCGACTCTTTCGGCTTTAACGGTGAGAAAATAGCCAGGTCTAGTAGTCGAATTTCAACCTCCTCAGTTGATTTGCAAACTTGCGGAGTTTGCTCAAAACTATTGACCGAGAAATCCTCATGGAGTAGCCAAAGGATCATTGCTAACAACGAGCTTTCTGTTGCTGCTGTACTAACCTGTGGACATGTTTATCATGCCGATTGCTTGGAGAGTATGACACCCGAGATTTACAAGTACGACCCGGCTTGTCCCGTTTGTACCTTCGGGGAGAAGCACACGCAGAAGCTGTCCGAAAAGGCGCTTAAAGCTGAAATGGACTGGAAGAGTCTATACAAGAGATCCAAAAACTGTAATGCAGATAGCCATTTTGAATCAAACAATCCTTTCAAAAACCATGCCCGTCTCGAAAAGGGCTCCAGAATGTCTGCGAGTTCTAGCACTAGAAGCTCCTCAGGAAAGCCGTTCTTAAAACGGCACTTCTCCTTCGGCTCGAAGGGATCTTCTAGAGTGATGTCTGATAATCATCACTCCACAAGAAGGAAAGGATTCTTCTGGGCAAAATCTAGCAAAGTATGAAAGATTTTAACAGTCCCGTTATGTCGCATTCATGAAACAGGAGAACCATAGCCATAAGAAGCTGTGTTCCCTCGTCCATTACAGCCAGCCAAATGCTTTGCTCCCAGAAATTGTTTGTAGTGTTTGAATGTTTCATGAAACAGGAATTGTGAGTCAACTTCATAACTCCATAACTCCATTTTAAACGTCTGTATACATATCAAAGATATGATATATATATATATATATAAATGTTATTGAGTTGAGATTCTTTCACTCTCATTTGTGTAAAACAGATTCCAATACCCCAATCTTCCTATGATCTTGTG

mRNA sequence

CCATTTCTCCCTCTAAAACTCTCTCTCTCTCTCTCGAGTTTGGGATTGGGCTCTGTGAAGATTGAACCGAATCTGTGTCCATTTATTCCGTGAAAAGAAGAGTTTCTTGTGCGGTTGTGTTTGTCTGTGTTTTCAGTGAGTGTGATTAATTAGTACCAAAACCGATTGGGTGAAGGTAGAAACTCGACGCGTTTGTAATGGAGGATGTTTTTTATTGGAAGTCCCGGTTTGCTTAAAGAACTAGGAAAAGCTTAGGATTTCCATCTTATGGTCGATGTGCTTTCTTGTGTGGTGGTGATCATATAGTGATTTGGAAATGGGAATCGAAATCCAAGAATTTATATCCCATCGGACAAAATACAGTTTGGCGTTTCCTTGAGAGGCATGGTGCTGGGGTTATTCTCAAAGTTCTACGTTTGAAGATCTTCAGCAACTCTTGTGGCGAAGTCATAAAAACCAAAATCTTGGTCCTTCTCCAGCATGGGATCTGCGTGTTGTGTTGCTGCTAGGGAAAATACTATAGTTAGTGGATCTGGAAGTGAAACCTTATGTAGGAATATGAGGTATTCTCCTAGTTGGAGCTTTCGATGGGATAATCGTGGACGAGTAGCTGGCGAAGAGACTTCGATAAATTGGTTTTCTGATGGTGTTAGTCGCAATGATAGTCCACTTGAACATCTCCGTAGACGTACATGGCAAAAGTCTCCACCGCCAGAAGGCACAACTAATAATTTGAGGACTCCTAGTTCAGGTCAATCAAATTCACGGAATGTATCAACAGATGTGAGTTTAGAACAGGTGAAGGAGGCTATGGATTCTCCCACAGCCTCATATAAGTCTCCTGCAAAATTGTCACTTTCATTGCCTTCAACTTCATCTTTGTCAACCTCTCCTTTATCATCACAGAGCTATCTGCCTCCAACCAATTCATCCCTAACAAGATGTACCCATCGATCTCCAGGACATCAGCTGTTGCGTCAAGGTTCTGACAACCGAATCCGAGGATTAAAATCACCAGGTAGCTATTTAGCTTCTGAAGATAGACCAAGGCTTCCCTCTTGGAGCAACGAATCGGTCCGTGACTCACATGGAGGGTCTTCAGATTGTTGGTCTGTCCATGCTTTCTCTGAGCTCATGGCCACTTCTCATCGAGAAAGATGGTCTTTTGATAGCGACTCTTTCGGCTTTAACGGTGAGAAAATAGCCAGGTCTAGTAGTCGAATTTCAACCTCCTCAGTTGATTTGCAAACTTGCGGAGTTTGCTCAAAACTATTGACCGAGAAATCCTCATGGAGTAGCCAAAGGATCATTGCTAACAACGAGCTTTCTGTTGCTGCTGTACTAACCTGTGGACATGTTTATCATGCCGATTGCTTGGAGAGTATGACACCCGAGATTTACAAGTACGACCCGGCTTGTCCCGTTTGTACCTTCGGGGAGAAGCACACGCAGAAGCTGTCCGAAAAGGCGCTTAAAGCTGAAATGGACTGGAAGAGTCTATACAAGAGATCCAAAAACTGTAATGCAGATAGCCATTTTGAATCAAACAATCCTTTCAAAAACCATGCCCGTCTCGAAAAGGGCTCCAGAATGTCTGCGAGTTCTAGCACTAGAAGCTCCTCAGGAAAGCCGTTCTTAAAACGGCACTTCTCCTTCGGCTCGAAGGGATCTTCTAGAGTGATGTCTGATAATCATCACTCCACAAGAAGGAAAGGATTCTTCTGGGCAAAATCTAGCAAAGTATGAAAGATTTTAACAGTCCCGTTATGTCGCATTCATGAAACAGGAGAACCATAGCCATAAGAAGCTGTGTTCCCTCGTCCATTACAGCCAGCCAAATGCTTTGCTCCCAGAAATTGTTTGTAGTGTTTGAATGTTTCATGAAACAGGAATTGTGAGTCAACTTCATAACTCCATAACTCCATTTTAAACGTCTGTATACATATCAAAGATATGATATATATATATATATATAAATGTTATTGAGTTGAGATTCTTTCACTCTCATTTGTGTAAAACAGATTCCAATACCCCAATCTTCCTATGATCTTGTG

Coding sequence (CDS)

ATGGGATCTGCGTGTTGTGTTGCTGCTAGGGAAAATACTATAGTTAGTGGATCTGGAAGTGAAACCTTATGTAGGAATATGAGGTATTCTCCTAGTTGGAGCTTTCGATGGGATAATCGTGGACGAGTAGCTGGCGAAGAGACTTCGATAAATTGGTTTTCTGATGGTGTTAGTCGCAATGATAGTCCACTTGAACATCTCCGTAGACGTACATGGCAAAAGTCTCCACCGCCAGAAGGCACAACTAATAATTTGAGGACTCCTAGTTCAGGTCAATCAAATTCACGGAATGTATCAACAGATGTGAGTTTAGAACAGGTGAAGGAGGCTATGGATTCTCCCACAGCCTCATATAAGTCTCCTGCAAAATTGTCACTTTCATTGCCTTCAACTTCATCTTTGTCAACCTCTCCTTTATCATCACAGAGCTATCTGCCTCCAACCAATTCATCCCTAACAAGATGTACCCATCGATCTCCAGGACATCAGCTGTTGCGTCAAGGTTCTGACAACCGAATCCGAGGATTAAAATCACCAGGTAGCTATTTAGCTTCTGAAGATAGACCAAGGCTTCCCTCTTGGAGCAACGAATCGGTCCGTGACTCACATGGAGGGTCTTCAGATTGTTGGTCTGTCCATGCTTTCTCTGAGCTCATGGCCACTTCTCATCGAGAAAGATGGTCTTTTGATAGCGACTCTTTCGGCTTTAACGGTGAGAAAATAGCCAGGTCTAGTAGTCGAATTTCAACCTCCTCAGTTGATTTGCAAACTTGCGGAGTTTGCTCAAAACTATTGACCGAGAAATCCTCATGGAGTAGCCAAAGGATCATTGCTAACAACGAGCTTTCTGTTGCTGCTGTACTAACCTGTGGACATGTTTATCATGCCGATTGCTTGGAGAGTATGACACCCGAGATTTACAAGTACGACCCGGCTTGTCCCGTTTGTACCTTCGGGGAGAAGCACACGCAGAAGCTGTCCGAAAAGGCGCTTAAAGCTGAAATGGACTGGAAGAGTCTATACAAGAGATCCAAAAACTGTAATGCAGATAGCCATTTTGAATCAAACAATCCTTTCAAAAACCATGCCCGTCTCGAAAAGGGCTCCAGAATGTCTGCGAGTTCTAGCACTAGAAGCTCCTCAGGAAAGCCGTTCTTAAAACGGCACTTCTCCTTCGGCTCGAAGGGATCTTCTAGAGTGATGTCTGATAATCATCACTCCACAAGAAGGAAAGGATTCTTCTGGGCAAAATCTAGCAAAGTATGA

Protein sequence

MGSACCVAARENTIVSGSGSETLCRNMRYSPSWSFRWDNRGRVAGEETSINWFSDGVSRNDSPLEHLRRRTWQKSPPPEGTTNNLRTPSSGQSNSRNVSTDVSLEQVKEAMDSPTASYKSPAKLSLSLPSTSSLSTSPLSSQSYLPPTNSSLTRCTHRSPGHQLLRQGSDNRIRGLKSPGSYLASEDRPRLPSWSNESVRDSHGGSSDCWSVHAFSELMATSHRERWSFDSDSFGFNGEKIARSSSRISTSSVDLQTCGVCSKLLTEKSSWSSQRIIANNELSVAAVLTCGHVYHADCLESMTPEIYKYDPACPVCTFGEKHTQKLSEKALKAEMDWKSLYKRSKNCNADSHFESNNPFKNHARLEKGSRMSASSSTRSSSGKPFLKRHFSFGSKGSSRVMSDNHHSTRRKGFFWAKSSKV

Homology

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BLAST of CmaCh20G008290 vs. TrEMBL
Match: A0A0A0LL82_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G249790 PE=4 SV=1)

HSP 1 Score: 746.5 bits (1926), Expect = 1.8e-212
Identity = 388/440 (88.18%), Postives = 407/440 (92.50%), Query Frame = 1


Query: 1   MGSACCVAARENTIVSGSGSETLCRNMRYSPSWSFRWDNRGRVAGEETSINWFSDGVSRN 60
           MGSACCVAAR+ TIVSGSGSETLCRN+RYSPSWSFRWDNRGRVAGEETSINWFSD V RN
Sbjct: 1   MGSACCVAARDKTIVSGSGSETLCRNIRYSPSWSFRWDNRGRVAGEETSINWFSDSVGRN 60

Query: 61  D---------------SPLEHLRRRTWQKSPPPEGTTNNLRTPSSGQSNSRNVSTDVSLE 120
           D               SPLEHLRRR WQKSPPPEGTTN+LRTPSSGQSNSRN+STDVSLE
Sbjct: 61  DRAELKCESAYASEDGSPLEHLRRRGWQKSPPPEGTTNHLRTPSSGQSNSRNLSTDVSLE 120

Query: 121 QVKEAMDSPTASYKSPAKLSLSLPSTSSLSTSPLSSQSYLPPTNSSLTRCTHRSPGHQLL 180
           QVKEA++SPTASYKSPAKLSLSLPSTSSLSTSPLSSQSYLPPTNSSLTRC+HRSPGH LL
Sbjct: 121 QVKEAIESPTASYKSPAKLSLSLPSTSSLSTSPLSSQSYLPPTNSSLTRCSHRSPGHHLL 180

Query: 181 RQGSDNRIRGLKSPGSYLASEDRPRLPSWSNESVRDSHGGSSDCWSVHAFSELMATSHRE 240
           RQ SD+RIRGLKSP SYLASEDRPRLPSWSNESVRDSHGGSSDCWSVHAFSELMATSHRE
Sbjct: 181 RQVSDSRIRGLKSPSSYLASEDRPRLPSWSNESVRDSHGGSSDCWSVHAFSELMATSHRE 240

Query: 241 RWSFDSDSFGFNGEKIARSSSRISTSSVDLQTCGVCSKLLTEKSSWSSQRIIANNELSVA 300
           RWSFDSDSFGFNGEKIARS+S+ISTSSVDLQTCGVCSKLLTEKSSWSSQRIIANNELSVA
Sbjct: 241 RWSFDSDSFGFNGEKIARSNSQISTSSVDLQTCGVCSKLLTEKSSWSSQRIIANNELSVA 300

Query: 301 AVLTCGHVYHADCLESMTPEIYKYDPACPVCTFGEKHTQKLSEKALKAEMDWKSLYKRSK 360
           AVLTCGHVYHADCLESMTPEI+KYDPACPVCTFGEKHTQKLSEKALKAE+DWKSLYKRSK
Sbjct: 301 AVLTCGHVYHADCLESMTPEIHKYDPACPVCTFGEKHTQKLSEKALKAEIDWKSLYKRSK 360

Query: 361 NCNADSHFE----SNNPFKNHARLEKGSRMSASSSTRSSSGKPFLKRHFSFGSKGSSRVM 420
            C ADS F+    +N+PFKN+ARLE+GS++SASSS RSSSGKPFLKRHFSFGSKGSSRVM
Sbjct: 361 KCIADSDFDGDFAANDPFKNNARLERGSKLSASSSMRSSSGKPFLKRHFSFGSKGSSRVM 420

Query: 421 SDNHHSTRRKGFFWAKSSKV 422
           SDN   TRRKGFFWAKSSKV
Sbjct: 421 SDN-PPTRRKGFFWAKSSKV 439

[Close]

BLAST of CmaCh20G008290 vs. TrEMBL
Match: M5W2R1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005921mg PE=4 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 6.2e-149
Identity = 298/439 (67.88%), Postives = 337/439 (76.77%), Query Frame = 1


Query: 1   MGSACCVAARENTIVSGSGSETLCRNMRYSPSWSFRWDNRGRVAGEETSINWFSDGVSRN 60
           MGSACCVAAR+ TI + + SE L RN+RYSP+WSFRWDNR  VAGEETS++WFSDG+SRN
Sbjct: 1   MGSACCVAARDKTITNRANSEVLHRNIRYSPTWSFRWDNRVGVAGEETSVSWFSDGISRN 60

Query: 61  D---------------SPLEHLRRRTWQKSPPPEGTTNNLRTPSSGQSNSRNVSTDVSLE 120
           D               SPL H RR T QKS   EGT  ++RTP+S +S SRN+S D SLE
Sbjct: 61  DGSEVKFESACVSEEGSPLVHFRRHTGQKSSISEGTAGHVRTPASDRSISRNISMDASLE 120

Query: 121 QVKEAMDSPTASYKSPAKLSLSLPSTSSLSTSPLSSQSYLPPTNSSLTRCTHRSPGHQLL 180
           Q KE+ +SPT SY SP KLS+SLPSTSSLS SPLSSQ +LPP +S+  R    SPGHQLL
Sbjct: 121 QAKESTESPTVSYPSPTKLSVSLPSTSSLSASPLSSQCHLPPASSTPLRWPRCSPGHQLL 180

Query: 181 RQGSDNRIRGLKSPGSYLASEDRPRLPSWSNESVRDSHGGSSDCWSVHAFSELMATSHRE 240
           RQ SD R+ G KSP S   SEDR RLPSWSNES R S GGSSD WS+HAFSELMATS+RE
Sbjct: 181 RQVSDGRVPGNKSPNSCSISEDRARLPSWSNESARGSRGGSSDSWSMHAFSELMATSNRE 240

Query: 241 RWSFDSDSFGFNGEKIARSSSRISTS-SVDLQTCGVCSKLLTEKSSWSSQRIIANNELSV 300
           RWSFDS+SFGFN EKI RSSSRIS S  VDLQTCGVCSKLLTEKSSWS Q+IIANNELSV
Sbjct: 241 RWSFDSESFGFNREKITRSSSRISASPPVDLQTCGVCSKLLTEKSSWSGQKIIANNELSV 300

Query: 301 AAVLTCGHVYHADCLESMTPEIYKYDPACPVCTFGEKHTQKLSEKALKAEMDWKSLYKRS 360
            AVL CGHVYHA+CLE+MT EI KYDPACP+CTFGEK   KLSEKALKAEMD KS  KRS
Sbjct: 301 VAVLICGHVYHAECLENMTSEINKYDPACPLCTFGEKQIHKLSEKALKAEMDLKSRNKRS 360

Query: 361 KN--CNADSHFESNNPFKNHARLEKGSRMSASSSTRSSSGKPFLKRHFSFGSKGSSRVMS 420
           +N   + DS     +  K+     KG +M +SSS RSS GKPFL+RHFSFGSK S+R +S
Sbjct: 361 RNRVLDLDSDSVVFDRLKSSGHQGKGPKMGSSSSMRSSLGKPFLRRHFSFGSK-STRALS 420

Query: 421 DNHHSTRRKGFFWAKSSKV 422
           +N HSTR+KGFFWAKSSK+
Sbjct: 421 EN-HSTRKKGFFWAKSSKM 437

[Close]

BLAST of CmaCh20G008290 vs. TrEMBL
Match: A0A061DYS5_THECC (RING/U-box superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_006836 PE=4 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 2.4e-145
Identity = 289/438 (65.98%), Postives = 340/438 (77.63%), Query Frame = 1


Query: 1   MGSACCVAARENTIVSGSGSETLCRNMRYSPSWSFRWDNRGRVAGEETSINWFSDGVSRN 60
           MG+ACCVAAR+ TIV+GSGSE L RN+RYSP+WSFRWDNRGRVAGE+TSI+WFSD +SRN
Sbjct: 1   MGAACCVAARDKTIVNGSGSEALHRNIRYSPTWSFRWDNRGRVAGEDTSISWFSDVISRN 60

Query: 61  D---------------SPLEHLRRRTWQKSPPPEGTTNNLRTPSSGQSNSRNVSTDVSLE 120
           D               SP E  + R W+KSP  EGT+  +RTP+S QS SRNVS +V++E
Sbjct: 61  DGSEIKYESACASEDGSPSESFQSRIWKKSPISEGTSGLVRTPASDQSISRNVSINVNIE 120

Query: 121 QVKEAMDSPTASYKSPAKLSLSLPSTSSLSTSPLSSQSYLPPTNSSLTRCTHRSPGHQLL 180
           QVKE+ +SP ASY SP+KLSLSLPS SSL+TSPLSSQS+  PT+S  TR   RSP H LL
Sbjct: 121 QVKESAESPAASYPSPSKLSLSLPSASSLATSPLSSQSHAHPTSSMTTRWPLRSPRHHLL 180

Query: 181 RQGSDNRIRGLKSPGSYLASEDRPRLPSWSNESVRDSHGGSSDCWSVHAFSELMATSHRE 240
           RQ SDNRI GLKSP  Y   E+R  +PSWSNES   S GGSSD WS+HAFSELMATS RE
Sbjct: 181 RQVSDNRIMGLKSPNRYSVGEERLVMPSWSNESTGGSQGGSSDGWSMHAFSELMATSRRE 240

Query: 241 RWSFDSDSFGFNGEKIARSSSRISTS-SVDLQTCGVCSKLLTEKSSWSSQRIIANNELSV 300
           RWSFDSDS+GF+ EKI+RSS RIS+S SVDLQTCGVCSKLL+EKS WSSQ+II NNELSV
Sbjct: 241 RWSFDSDSWGFHREKISRSSGRISSSPSVDLQTCGVCSKLLSEKSLWSSQKIIINNELSV 300

Query: 301 AAVLTCGHVYHADCLESMTPEIYKYDPACPVCTFGEKHTQKLSEKALKAEMDWKS-LYKR 360
            AVLTCGHVYHA+CLE+MTPEI KYDPACP+CT GEK   KLSEKA KAE+D+K+ + KR
Sbjct: 301 VAVLTCGHVYHAECLENMTPEIDKYDPACPICTLGEKKAHKLSEKAFKAELDFKAKINKR 360

Query: 361 SKNCNADSHFESNNPFKNHARLEKGSRMSASSSTRSSSGKPFLKRHFSFGSKGSSRVMSD 420
           S++   DS  +++    N  R       ++SSS +SS GKPFL++HFSFGSKG SR  S+
Sbjct: 361 SRSRVVDSDIDADPVIFNRLRSSVHEGKASSSSMKSSLGKPFLRKHFSFGSKG-SRSPSE 420

Query: 421 NHHSTRRKGFFWAKSSKV 422
           N H TR+KGFFWAKSSK+
Sbjct: 421 N-HPTRKKGFFWAKSSKI 436

[Close]

BLAST of CmaCh20G008290 vs. TrEMBL
Match: A0A061DYZ6_THECC (RING/U-box superfamily protein isoform 3 OS=Theobroma cacao GN=TCM_006836 PE=4 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 4.6e-144
Identity = 289/439 (65.83%), Postives = 340/439 (77.45%), Query Frame = 1


Query: 1   MGSACCVAARENTIVSGSGSETLCRNMRYSPSWSFRWDNRGRVAGEETSINWFSDGVSRN 60
           MG+ACCVAAR+ TIV+GSGSE L RN+RYSP+WSFRWDNRGRVAGE+TSI+WFSD +SRN
Sbjct: 1   MGAACCVAARDKTIVNGSGSEALHRNIRYSPTWSFRWDNRGRVAGEDTSISWFSDVISRN 60

Query: 61  D---------------SPLEHLRRRTWQKSPPPEGTTNNLRTPSSG-QSNSRNVSTDVSL 120
           D               SP E  + R W+KSP  EGT+  +RTP+S  QS SRNVS +V++
Sbjct: 61  DGSEIKYESACASEDGSPSESFQSRIWKKSPISEGTSGLVRTPASADQSISRNVSINVNI 120

Query: 121 EQVKEAMDSPTASYKSPAKLSLSLPSTSSLSTSPLSSQSYLPPTNSSLTRCTHRSPGHQL 180
           EQVKE+ +SP ASY SP+KLSLSLPS SSL+TSPLSSQS+  PT+S  TR   RSP H L
Sbjct: 121 EQVKESAESPAASYPSPSKLSLSLPSASSLATSPLSSQSHAHPTSSMTTRWPLRSPRHHL 180

Query: 181 LRQGSDNRIRGLKSPGSYLASEDRPRLPSWSNESVRDSHGGSSDCWSVHAFSELMATSHR 240
           LRQ SDNRI GLKSP  Y   E+R  +PSWSNES   S GGSSD WS+HAFSELMATS R
Sbjct: 181 LRQVSDNRIMGLKSPNRYSVGEERLVMPSWSNESTGGSQGGSSDGWSMHAFSELMATSRR 240

Query: 241 ERWSFDSDSFGFNGEKIARSSSRISTS-SVDLQTCGVCSKLLTEKSSWSSQRIIANNELS 300
           ERWSFDSDS+GF+ EKI+RSS RIS+S SVDLQTCGVCSKLL+EKS WSSQ+II NNELS
Sbjct: 241 ERWSFDSDSWGFHREKISRSSGRISSSPSVDLQTCGVCSKLLSEKSLWSSQKIIINNELS 300

Query: 301 VAAVLTCGHVYHADCLESMTPEIYKYDPACPVCTFGEKHTQKLSEKALKAEMDWKS-LYK 360
           V AVLTCGHVYHA+CLE+MTPEI KYDPACP+CT GEK   KLSEKA KAE+D+K+ + K
Sbjct: 301 VVAVLTCGHVYHAECLENMTPEIDKYDPACPICTLGEKKAHKLSEKAFKAELDFKAKINK 360

Query: 361 RSKNCNADSHFESNNPFKNHARLEKGSRMSASSSTRSSSGKPFLKRHFSFGSKGSSRVMS 420
           RS++   DS  +++    N  R       ++SSS +SS GKPFL++HFSFGSKG SR  S
Sbjct: 361 RSRSRVVDSDIDADPVIFNRLRSSVHEGKASSSSMKSSLGKPFLRKHFSFGSKG-SRSPS 420

Query: 421 DNHHSTRRKGFFWAKSSKV 422
           +N H TR+KGFFWAKSSK+
Sbjct: 421 EN-HPTRKKGFFWAKSSKI 437

[Close]

BLAST of CmaCh20G008290 vs. TrEMBL
Match: A0A0B0MTV0_GOSAR (E3 ubiquitin-protein ligase TRIM50 OS=Gossypium arboreum GN=F383_28353 PE=4 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 8.9e-140
Identity = 278/438 (63.47%), Postives = 333/438 (76.03%), Query Frame = 1


Query: 1   MGSACCVAARENTIVSGSGSETLCRNMRYSPSWSFRWDNRGRVAGEETSINWFSDGVSRN 60
           MG+ACCVAAR+ TIV+GSGSE L RN+RYSP+WSFRWDNRGRVAGE+TSI+WFSD VSRN
Sbjct: 1   MGAACCVAARDKTIVNGSGSEVLHRNIRYSPTWSFRWDNRGRVAGEDTSISWFSDAVSRN 60

Query: 61  D---------------SPLEHLRRRTWQKSPPPEGTTNNLRTPSSGQSNSRNVSTDVSLE 120
           D               +  E  + RTWQKSP  EGT  + RTP+S QS SRN+S DV+LE
Sbjct: 61  DGSEIKYESACASEDGNSSESFQSRTWQKSPTSEGTAGHARTPASDQSISRNISVDVNLE 120

Query: 121 QVKEAMDSPTASYKSPAKLSLSLPSTSSLSTSPLSSQSYLPPTNSSLTRCTHRSPGHQLL 180
           QVKE+++SP ASY SP+KLS SLPS SSL+TSPLSSQS++ PT S++TR   RSPGH LL
Sbjct: 121 QVKESVESPVASYPSPSKLSHSLPSASSLATSPLSSQSHVHPTGSTITRWPLRSPGHHLL 180

Query: 181 RQGSDNRIRGLKSPGSYLASEDRPRLPSWSNESVRDSHGGSSDCWSVHAFSELMATSHRE 240
           RQ SDNRI GLKSP  Y   E+R  +PSWSNES   S GGSSD WS+ AFSE M  S RE
Sbjct: 181 RQVSDNRILGLKSPIGYSVGEERLVMPSWSNESTGGSRGGSSDGWSMQAFSEFMPPSRRE 240

Query: 241 RWSFDSDSFGFNGEKIARSSSRIST-SSVDLQTCGVCSKLLTEKSSWSSQRIIANNELSV 300
           RWSFD+D++GF  EKI++ S RIS   SVDLQTCGVCSKLL+EKS WS+Q+II +N+LSV
Sbjct: 241 RWSFDNDTWGFQREKISKPSGRISAPPSVDLQTCGVCSKLLSEKSLWSTQKIIISNDLSV 300

Query: 301 AAVLTCGHVYHADCLESMTPEIYKYDPACPVCTFGEKHTQKLSEKALKAEMDWKS-LYKR 360
            AVLTCGHVYHA+CLE+MTPEI KYDPACP+CT GEK T KLSEKA KAEMD+K+ + K+
Sbjct: 301 VAVLTCGHVYHAECLENMTPEIDKYDPACPICTLGEKKTHKLSEKAFKAEMDFKAKINKK 360

Query: 361 SKNCNADSHFESNNPFKNHARLEKGSRMSASSSTRSSSGKPFLKRHFSFGSKGSSRVMSD 420
           S++   DS  + +    N  +       ++SSS +SS GKPFLK+HFSFGSKG SR  S+
Sbjct: 361 SRSRVVDSDMDVDPIVFNRLKSSGHEGKASSSSMKSSLGKPFLKKHFSFGSKG-SRSPSE 420

Query: 421 NHHSTRRKGFFWAKSSKV 422
           N HS  +KGFFWAKSS++
Sbjct: 421 N-HSNWKKGFFWAKSSRI 436

[Close]

BLAST of CmaCh20G008290 vs. TAIR10
Match: AT4G39140.1 (AT4G39140.1 RING/U-box superfamily protein)

HSP 1 Score: 321.2 bits (822), Expect = 9.3e-88
Identity = 211/451 (46.78%), Postives = 274/451 (60.75%), Query Frame = 1


Query: 1   MGSACCVAARENTIV-SGSGSETLCR-NMRYSPSWSFRWDNRGRVAGEETSINWFSDGVS 60
           MG+ACCVAAR+  +V + S  E L R N+R+SPSWSFRWDNRGRVAGEETS++W SDG+S
Sbjct: 1   MGNACCVAARDKMVVPNSSAGENLQRSNIRHSPSWSFRWDNRGRVAGEETSLSWLSDGIS 60

Query: 61  RND---------------SPLEHLRRRTWQKSPPPEGTTNNLRTPSSGQSNSRNVSTDVS 120
           RND               SPL+  R +T QKS            P+S  S  RN S +  
Sbjct: 61  RNDGSEIKFESAFVSSEGSPLDSFRTQTLQKS------------PASDLSFPRNSSMNTV 120

Query: 121 LEQVKE-AMDSPTASYKSPAKLSLSLPS-TSSLSTSPLSSQSYLPPTNSSLTRCTHRSPG 180
            EQ +  + +S   SY SPA+LSLSL S  SS  TSPLSSQSYL P +SS  + T     
Sbjct: 121 FEQKENVSTESAAPSYLSPAQLSLSLASQPSSFPTSPLSSQSYLHPASSSTLKLTQHP-- 180

Query: 181 HQLLRQGSDNRIRGLKSPGSYLASEDRPRLPSWSNESVRDSHGGSSDCWSVHAFSELMAT 240
            +L +Q SD +I G  S     A+E+R   P+        S  G S+ WS+ AFSE+M++
Sbjct: 181 -RLSKQVSDGQIYGQNSLSRSSATEERQGTPT----RYDSSQSGPSEGWSLQAFSEMMSS 240

Query: 241 SHRERW----SFDSDSFGFNGEKIARSSSRISTSSVDLQTCGVCSKLLTEKSSWSSQRII 300
           S   +     ++D+D FG   +KI    +R+S       TCG CS+ L+EKS WSSQ+I 
Sbjct: 241 SRSNKALSYDNYDNDCFGLQRDKIDHHGNRMSKH--QQHTCGACSRPLSEKSLWSSQKIF 300

Query: 301 ANNELSVAAVLTCGHVYHADCLESMTPEIYKYDPACPVCTFGEKHTQKLSEKALKAEMDW 360
             NELSV+A+L CGHVYH +CLE MTPEI K+DP+CP+CT GEK T KLSEKALK EMD 
Sbjct: 301 MTNELSVSAILACGHVYHGECLEQMTPEIDKFDPSCPICTMGEKKTAKLSEKALKVEMDL 360

Query: 361 KSLY-KRSKNCNADSHFES------NNPFKNHARLEKGSRMSASSSTRSSSGKPFLKRHF 420
           K+ + KR +N   DS F+       ++  +  A   K  R+ +SSS +S S KPFL RHF
Sbjct: 361 KARHNKRLRNRVLDSDFDCDDFVMFDHSHRTAAAASKSPRLVSSSSAKSYSAKPFLARHF 420

Query: 421 SFGSKGSSRVMSDNHHSTRRKGFFWAKSSKV 422
           SFGS+ + +   +N    ++KGFFW KSSK+
Sbjct: 421 SFGSRSNYKSPKEN-LPVKKKGFFWTKSSKI 429

[Close]

BLAST of CmaCh20G008290 vs. TAIR10
Match: AT2G21500.2 (AT2G21500.2 RING/U-box superfamily protein)

HSP 1 Score: 307.4 bits (786), Expect = 1.4e-83
Identity = 215/454 (47.36%), Postives = 274/454 (60.35%), Query Frame = 1


Query: 1   MGSACCVAARENTIVSGSGS-ETLCRN-MRYSPSWSFRWDNRG-RVAGEETSINWFSDGV 60
           MG+ACCVA R+  +V  + + E   RN +RYSP+WSFRWDNRG RVAGEETS++  SD +
Sbjct: 1   MGNACCVATRDKMVVPNTSAVENFQRNNVRYSPNWSFRWDNRGGRVAGEETSVSLLSDRI 60

Query: 61  SRND---------------SPLEHLRRRTWQKSPPPEGTTNNLRTPSSGQSNSRNVSTDV 120
           SRND               SPL++ + ++WQKSP            +S QS SR  S D 
Sbjct: 61  SRNDVSDVKSETALVSSQGSPLDNFQTQSWQKSP------------ASDQSFSRIASIDS 120

Query: 121 SLEQVKEAMDSPT--ASYKSPAKLSLSLPST-SSLSTSPLSSQSYLP--PTNSSLTRCTH 180
             EQ+ +  +  T    Y SPAKLSLSL S  SS S SPLSSQS+LP  P +SS  + T 
Sbjct: 121 VSEQITQKTNDSTDPTYYPSPAKLSLSLASQPSSFSVSPLSSQSHLPMPPASSSQLKLT- 180

Query: 181 RSPGHQLLRQGSDNRIRGLKSPGSYLASEDRPRLPSWSNESVRDSHGGSSDCWSVHAFSE 240
             P  +L +Q S  +I G  SP    A+E+R       NES        SD WS+ AFSE
Sbjct: 181 --PPPRLSKQVSYGQIFGFTSPSRSSATEER-----LGNES-------QSDGWSMQAFSE 240

Query: 241 LMATSHRERWSFDSDSFGFNGEKIARSSSRISTSSVDLQTCGVCSKLLTEKSSWSSQRII 300
           +MA S RE  S+D++ FG   +KI    SR S    D Q CG CS+ L+EKS  SSQ+I 
Sbjct: 241 MMAYSRRESCSYDNECFGLRRDKIDNLGSRKSN---DQQNCGACSRSLSEKSLLSSQKIF 300

Query: 301 ANNELSVAAVLTCGHVYHADCLESMTPEIYKYDPACPVCTFGEKHTQKLSEKALKAEMDW 360
           A NELSVAA+L CGHVYH++CLE MTPEI K+DP+CP+CT GEK T KLSEKALKA+++ 
Sbjct: 301 ATNELSVAAILACGHVYHSECLEQMTPEIDKFDPSCPICTLGEKKTFKLSEKALKADLEM 360

Query: 361 KSLYK---RSKNCNADSHFESNNPFKNHARL----EKGSRMSASSSTRSSSGKPFLKRHF 420
           K+ +    R++  ++D   + NN   NH        K  ++ +SSS RS S KPFL RHF
Sbjct: 361 KARHNKRLRNRVVDSDEFVKFNN---NHEAAVGYKGKTPKLISSSSLRSYSPKPFLARHF 420

Query: 421 SFGSKGSSRVMSDNHH---STRRKGFFWAKSSKV 422
           SFGS+ +S       H   S R+KGFFW KSSK+
Sbjct: 421 SFGSRSNSVKSPKEIHSPSSLRKKGFFWTKSSKI 421

[Close]

BLAST of CmaCh20G008290 vs. TAIR10
Match: AT1G75400.1 (AT1G75400.1 RING/U-box superfamily protein)

HSP 1 Score: 249.6 bits (636), Expect = 3.4e-66
Identity = 193/451 (42.79%), Postives = 251/451 (55.65%), Query Frame = 1


Query: 1   MGSACCVAARENTIVSGSG--SETLCRNMRYSPSWSFRWDNRGRVAGEETSINWFSDGVS 60
           MGS CCVA ++  +    G  S ++ RN   SP WSFR DNR RVA E     ++S  V+
Sbjct: 1   MGSVCCVAVKDRKVPPSGGPASSSVHRNSACSPQWSFRRDNRRRVADEIEGSPYYSPYVA 60

Query: 61  RNDSPLE--------------------HLRRRTWQKSPPPEGTTNNLRTPSSGQSNSRNV 120
                ++                    HL     QKS  PE +TN++  PSSG S + + 
Sbjct: 61  SRGISMDKMSLGSERGTLSEGGTPPDGHLGTPASQKSATPEMSTNSMVPPSSGSSLASS- 120

Query: 121 STDVSLEQVKEAMDSPTASYKSPAKLSLSLPSTSSLSTSPLSSQSYLPPTNSSLTRCTHR 180
                L +VK  +DSP     + +K   S PS  +  +   S+ + L P  S+ +R   R
Sbjct: 121 ----DLIEVKNLVDSPGIVPSAQSKPLFSTPSLPNPVSDLSSAHTRLLPPKSTPSRRARR 180

Query: 181 SPGHQLLRQGSDNRIRGLKSP-GSYLASEDRPR--LPSWSNESVRDSHGGSSDC-WSVHA 240
           SPGHQL RQ SD++I GLKSP  +Y  SE R    L + SN+    S   SS+  WS++ 
Sbjct: 181 SPGHQLFRQVSDSQILGLKSPINNYSISEGRSSFVLSTCSNDFATGSQYASSEGGWSMNT 240

Query: 241 FSELMATSHRERWSFDSDSFGFNGEKIARSSSRISTSS--VDLQTCGVCSKLLTEKSSWS 300
           FSEL+A S R+RWSFDS+  G    K++  SSR S S   VD Q CG CSKLLTE+SS  
Sbjct: 241 FSELVAYSQRDRWSFDSEHLGSGRRKLSGGSSRFSFSPSVVDQQVCGACSKLLTERSS-- 300

Query: 301 SQRIIANNELSVAAVLTCGHVYHADCLESMTPEIYKYDPACPVCTFGEKHTQKLSEKALK 360
               IA  EL +AAVL CGHVYHA+CLE+MT +I KYDPACP+CT GEK   K++ KALK
Sbjct: 301 ----IATFELPIAAVLACGHVYHAECLETMTTDIEKYDPACPICTIGEKRVAKITRKALK 360

Query: 361 AEMDWKS-LYKRSKNCNADSHFESN-NPF---KNHARLEKGSRMSASSSTRSSSGKPFLK 418
           AE + K+  YKR KN   DS+ ES  + F   K   R  K  ++ AS S++SSS K FLK
Sbjct: 361 AEAEAKAKQYKRCKNRVVDSYGESECDEFVFQKMGKREGKALKLEASCSSKSSSNKSFLK 420

[Close]

BLAST of CmaCh20G008290 vs. TAIR10
Match: AT1G19680.1 (AT1G19680.1 RING/U-box superfamily protein)

HSP 1 Score: 223.4 bits (568), Expect = 2.6e-58
Identity = 190/452 (42.04%), Postives = 248/452 (54.87%), Query Frame = 1


Query: 1   MGSACCVAARENTIVSGSGSETLCRNMRYSPSWSFRWDNRGRVAGE------------ET 60
           MGS CCVAA++  + SG+   ++C     SPSWSFR DNR RVA E              
Sbjct: 1   MGSVCCVAAKDRNVPSGAIDNSVC-----SPSWSFRRDNRRRVADEIKDSSNHNVGSRGI 60

Query: 61  SINWFSDGVSRNDSPLEH--LRRRTWQKSPPPE-GTTNNLRTPSSGQSNSRNVSTDVSLE 120
            I+  S G+ R     E   L     QKS   E GT + +  P +G S +    +DVSL 
Sbjct: 61  DIDKLSLGLERGPPSSETGGLATLGSQKSADSEMGTASMVTAPLAGTSLAIRSPSDVSLA 120

Query: 121 -----QVKEAMDSPTASYKSPAKLSLSLPS-TSSLSTSPL-SSQSYLPPTNSSLTRCTHR 180
                +VK  +DS          +S  LP+ +SS S S L S+ ++  P  S+ +R    
Sbjct: 121 SPVRVEVKNIVDSSDI-------VSSVLPNPSSSTSVSDLPSAHTHSLPPRSTPSRRARG 180

Query: 181 SPGHQLLRQGSDNRIRGLKSPGSYLASEDRPR--LPSWSNESVRDSHGGSSDC-WSVHAF 240
           SPG QL RQ SD++  GLKSP +Y  SE R    L + SN++   SH  SS+  WS++AF
Sbjct: 181 SPGQQLFRQVSDSQTLGLKSPNNYSTSEGRSSFVLSTCSNDTATGSHFASSEGGWSINAF 240

Query: 241 SELMATSHRERWSFDSDSFGFNGEKIAR-SSSRISTS-SVDLQTCGVCSKLLTEKSSWSS 300
            EL+A S RERWSFD++  G    +++  SSSR S S SVD QTCG CSKLLTE+S    
Sbjct: 241 CELVAQSQRERWSFDNEHLGSGRRRLSGCSSSRFSCSPSVDQQTCGRCSKLLTERSP--- 300

Query: 301 QRIIANNELSVAAVLTCGHVYHADCLESMTPEIYKYDPACPVCTFGEKHTQKLSEKALKA 360
              +A  +L + AVL CGHVYHA CLE+MT E  KYDP CP+CT  E    KLS KALKA
Sbjct: 301 ---VARFDLPIPAVLACGHVYHAACLETMTNETEKYDPTCPICT--ETQVTKLSRKALKA 360

Query: 361 EMDWKSL-YKRSKNCNADSHFES---NNPFKNHARLE-KGSRMSASSSTRSSSGKPFLKR 420
           E + K+  YKR KN   DS+  S   +  F+N  + E KG +M  SS+T+ S+ K F+K 
Sbjct: 361 EAELKATSYKRCKNRVVDSYVRSECEDLMFQNLGKREGKGLKMDPSSNTKGSTSKSFMKW 420

[Close]

BLAST of CmaCh20G008290 vs. TAIR10
Match: AT1G14180.1 (AT1G14180.1 RING/U-box superfamily protein)

HSP 1 Score: 73.2 bits (178), Expect = 4.4e-13
Identity = 68/229 (29.69%), Postives = 109/229 (47.60%), Query Frame = 1


Query: 196 NESVRDSHGGSSDC--WSVHAFSELMATSHRERWSFDSDSFGFNGEKIARSSSRISTSSV 255
           +++VRD+   S+D   WS    S + +    E    D ++     +++A SS+       
Sbjct: 131 SDNVRDTASDSADACSWSSGTPSSIDSVDVPEP-VLDWNNNSTKAQQVAASSTF------ 190

Query: 256 DLQTCGVCSKLLTEKSSWSSQRIIANNELSVAAVLTCGHVYHADCLESMTPEIYKYDPAC 315
               CG+C++ L++KS W S+ I+ N ++ V  VL+C HV+H +CL+  TP+I + DP C
Sbjct: 191 ---KCGLCNRYLSQKSPWGSRSIVRNRDMPVTGVLSCQHVFHVECLDQSTPKIQRNDPLC 250

Query: 316 PVCTFGEKHTQKLSEKALKAEMDWKSLYK-----RSKNC-NADSHFES--NNPFKNHARL 375
           P+CT  E    K +    +     K LY+     R   C  A    ES  N P KN   +
Sbjct: 251 PICTKQEGEHFKSNNIVPRL----KPLYEDGPSSRPWGCAQAGDCVESAVNVPPKNTMMM 310

Query: 376 EKGSRMSASSSTRSSSGKPF---LKRHFSFGSKGSSRVMSDNHHSTRRK 412
              +R+  S S R +S K F   +KR  S   +  +  +S  H   + K
Sbjct: 311 INRNRIRKSLSLRGNSSKDFSRKMKRSNSVAMENLANQVSLVHSRGKEK 345

[Close]

BLAST of CmaCh20G008290 vs. NCBI nr
Match: gi|449464702|ref|XP_004150068.1| (PREDICTED: uncharacterized protein LOC101206081 isoform X2 [Cucumis sativus])

HSP 1 Score: 746.5 bits (1926), Expect = 2.5e-212
Identity = 388/440 (88.18%), Postives = 407/440 (92.50%), Query Frame = 1


Query: 1   MGSACCVAARENTIVSGSGSETLCRNMRYSPSWSFRWDNRGRVAGEETSINWFSDGVSRN 60
           MGSACCVAAR+ TIVSGSGSETLCRN+RYSPSWSFRWDNRGRVAGEETSINWFSD V RN
Sbjct: 1   MGSACCVAARDKTIVSGSGSETLCRNIRYSPSWSFRWDNRGRVAGEETSINWFSDSVGRN 60

Query: 61  D---------------SPLEHLRRRTWQKSPPPEGTTNNLRTPSSGQSNSRNVSTDVSLE 120
           D               SPLEHLRRR WQKSPPPEGTTN+LRTPSSGQSNSRN+STDVSLE
Sbjct: 61  DRAELKCESAYASEDGSPLEHLRRRGWQKSPPPEGTTNHLRTPSSGQSNSRNLSTDVSLE 120

Query: 121 QVKEAMDSPTASYKSPAKLSLSLPSTSSLSTSPLSSQSYLPPTNSSLTRCTHRSPGHQLL 180
           QVKEA++SPTASYKSPAKLSLSLPSTSSLSTSPLSSQSYLPPTNSSLTRC+HRSPGH LL
Sbjct: 121 QVKEAIESPTASYKSPAKLSLSLPSTSSLSTSPLSSQSYLPPTNSSLTRCSHRSPGHHLL 180

Query: 181 RQGSDNRIRGLKSPGSYLASEDRPRLPSWSNESVRDSHGGSSDCWSVHAFSELMATSHRE 240
           RQ SD+RIRGLKSP SYLASEDRPRLPSWSNESVRDSHGGSSDCWSVHAFSELMATSHRE
Sbjct: 181 RQVSDSRIRGLKSPSSYLASEDRPRLPSWSNESVRDSHGGSSDCWSVHAFSELMATSHRE 240

Query: 241 RWSFDSDSFGFNGEKIARSSSRISTSSVDLQTCGVCSKLLTEKSSWSSQRIIANNELSVA 300
           RWSFDSDSFGFNGEKIARS+S+ISTSSVDLQTCGVCSKLLTEKSSWSSQRIIANNELSVA
Sbjct: 241 RWSFDSDSFGFNGEKIARSNSQISTSSVDLQTCGVCSKLLTEKSSWSSQRIIANNELSVA 300

Query: 301 AVLTCGHVYHADCLESMTPEIYKYDPACPVCTFGEKHTQKLSEKALKAEMDWKSLYKRSK 360
           AVLTCGHVYHADCLESMTPEI+KYDPACPVCTFGEKHTQKLSEKALKAE+DWKSLYKRSK
Sbjct: 301 AVLTCGHVYHADCLESMTPEIHKYDPACPVCTFGEKHTQKLSEKALKAEIDWKSLYKRSK 360

Query: 361 NCNADSHFE----SNNPFKNHARLEKGSRMSASSSTRSSSGKPFLKRHFSFGSKGSSRVM 420
            C ADS F+    +N+PFKN+ARLE+GS++SASSS RSSSGKPFLKRHFSFGSKGSSRVM
Sbjct: 361 KCIADSDFDGDFAANDPFKNNARLERGSKLSASSSMRSSSGKPFLKRHFSFGSKGSSRVM 420

Query: 421 SDNHHSTRRKGFFWAKSSKV 422
           SDN   TRRKGFFWAKSSKV
Sbjct: 421 SDN-PPTRRKGFFWAKSSKV 439

[Close]

BLAST of CmaCh20G008290 vs. NCBI nr
Match: gi|778669415|ref|XP_011649243.1| (PREDICTED: uncharacterized protein LOC101206081 isoform X1 [Cucumis sativus])

HSP 1 Score: 741.9 bits (1914), Expect = 6.2e-211
Identity = 388/441 (87.98%), Postives = 407/441 (92.29%), Query Frame = 1


Query: 1   MGSACCVAARENTIVSGSGSETLCRNMRYSPSWSFRWDNRGRVAGEETSINWFSDGVSRN 60
           MGSACCVAAR+ TIVSGSGSETLCRN+RYSPSWSFRWDNRGRVAGEETSINWFSD V RN
Sbjct: 1   MGSACCVAARDKTIVSGSGSETLCRNIRYSPSWSFRWDNRGRVAGEETSINWFSDSVGRN 60

Query: 61  D---------------SPLEHLRRRTWQKSPPPEGTTNNLRTPSSGQSNSRNVSTDVSLE 120
           D               SPLEHLRRR WQKSPPPEGTTN+LRTPSSGQSNSRN+STDVSLE
Sbjct: 61  DRAELKCESAYASEDGSPLEHLRRRGWQKSPPPEGTTNHLRTPSSGQSNSRNLSTDVSLE 120

Query: 121 Q-VKEAMDSPTASYKSPAKLSLSLPSTSSLSTSPLSSQSYLPPTNSSLTRCTHRSPGHQL 180
           Q VKEA++SPTASYKSPAKLSLSLPSTSSLSTSPLSSQSYLPPTNSSLTRC+HRSPGH L
Sbjct: 121 QQVKEAIESPTASYKSPAKLSLSLPSTSSLSTSPLSSQSYLPPTNSSLTRCSHRSPGHHL 180

Query: 181 LRQGSDNRIRGLKSPGSYLASEDRPRLPSWSNESVRDSHGGSSDCWSVHAFSELMATSHR 240
           LRQ SD+RIRGLKSP SYLASEDRPRLPSWSNESVRDSHGGSSDCWSVHAFSELMATSHR
Sbjct: 181 LRQVSDSRIRGLKSPSSYLASEDRPRLPSWSNESVRDSHGGSSDCWSVHAFSELMATSHR 240

Query: 241 ERWSFDSDSFGFNGEKIARSSSRISTSSVDLQTCGVCSKLLTEKSSWSSQRIIANNELSV 300
           ERWSFDSDSFGFNGEKIARS+S+ISTSSVDLQTCGVCSKLLTEKSSWSSQRIIANNELSV
Sbjct: 241 ERWSFDSDSFGFNGEKIARSNSQISTSSVDLQTCGVCSKLLTEKSSWSSQRIIANNELSV 300

Query: 301 AAVLTCGHVYHADCLESMTPEIYKYDPACPVCTFGEKHTQKLSEKALKAEMDWKSLYKRS 360
           AAVLTCGHVYHADCLESMTPEI+KYDPACPVCTFGEKHTQKLSEKALKAE+DWKSLYKRS
Sbjct: 301 AAVLTCGHVYHADCLESMTPEIHKYDPACPVCTFGEKHTQKLSEKALKAEIDWKSLYKRS 360

Query: 361 KNCNADSHFE----SNNPFKNHARLEKGSRMSASSSTRSSSGKPFLKRHFSFGSKGSSRV 420
           K C ADS F+    +N+PFKN+ARLE+GS++SASSS RSSSGKPFLKRHFSFGSKGSSRV
Sbjct: 361 KKCIADSDFDGDFAANDPFKNNARLERGSKLSASSSMRSSSGKPFLKRHFSFGSKGSSRV 420

Query: 421 MSDNHHSTRRKGFFWAKSSKV 422
           MSDN   TRRKGFFWAKSSKV
Sbjct: 421 MSDN-PPTRRKGFFWAKSSKV 440

[Close]

BLAST of CmaCh20G008290 vs. NCBI nr
Match: gi|659122120|ref|XP_008460978.1| (PREDICTED: uncharacterized protein DDB_G0271670-like isoform X2 [Cucumis melo])

HSP 1 Score: 740.7 bits (1911), Expect = 1.4e-210
Identity = 387/440 (87.95%), Postives = 405/440 (92.05%), Query Frame = 1


Query: 1   MGSACCVAARENTIVSGSGSETLCRNMRYSPSWSFRWDNRGRVAGEETSINWFSDGVSRN 60
           MGSACCVAAR+ TIVSGSGSETLCRN+RYSPSWSFRWDNRGRVAGEETSINWFSD V RN
Sbjct: 1   MGSACCVAARDKTIVSGSGSETLCRNIRYSPSWSFRWDNRGRVAGEETSINWFSDSVGRN 60

Query: 61  D---------------SPLEHLRRRTWQKSPPPEGTTNNLRTPSSGQSNSRNVSTDVSLE 120
           D               SPLEHLRRR WQKSPPPEGTTN+L TPSSGQSNSRN+STDVSLE
Sbjct: 61  DRVELKCESAYASEDGSPLEHLRRRGWQKSPPPEGTTNHLGTPSSGQSNSRNLSTDVSLE 120

Query: 121 QVKEAMDSPTASYKSPAKLSLSLPSTSSLSTSPLSSQSYLPPTNSSLTRCTHRSPGHQLL 180
           QVKEA++SPTASYKSPAKLSLSLPSTSSLSTSPLSSQSYLPPTNSSLTRC+HRSPGH LL
Sbjct: 121 QVKEAIESPTASYKSPAKLSLSLPSTSSLSTSPLSSQSYLPPTNSSLTRCSHRSPGHHLL 180

Query: 181 RQGSDNRIRGLKSPGSYLASEDRPRLPSWSNESVRDSHGGSSDCWSVHAFSELMATSHRE 240
           RQ SD+RIRGLKS  SYLASEDRPRLPSWSNESVRDSHGGSSDCWSVHAFSELMATSHRE
Sbjct: 181 RQVSDSRIRGLKSSSSYLASEDRPRLPSWSNESVRDSHGGSSDCWSVHAFSELMATSHRE 240

Query: 241 RWSFDSDSFGFNGEKIARSSSRISTSSVDLQTCGVCSKLLTEKSSWSSQRIIANNELSVA 300
           RWSFDSDSFGFNGEKIARSSS+ISTSSVDLQTCGVCSKLLTEKSSWSSQRIIANNELSVA
Sbjct: 241 RWSFDSDSFGFNGEKIARSSSQISTSSVDLQTCGVCSKLLTEKSSWSSQRIIANNELSVA 300

Query: 301 AVLTCGHVYHADCLESMTPEIYKYDPACPVCTFGEKHTQKLSEKALKAEMDWKSLYKRSK 360
           AVLTCGHVYHADCLESMTPEI+KYDPACPVCTFGEKHTQKLSEKALKAEMDWKSLYKRSK
Sbjct: 301 AVLTCGHVYHADCLESMTPEIHKYDPACPVCTFGEKHTQKLSEKALKAEMDWKSLYKRSK 360

Query: 361 NCNADSHFE----SNNPFKNHARLEKGSRMSASSSTRSSSGKPFLKRHFSFGSKGSSRVM 420
            C ADS F+    +N+ FKN+ARLE+GS++SASSS RSSSGKPFLKRHFSFGSKGSSRVM
Sbjct: 361 KCIADSDFDGDFAANDRFKNNARLERGSKLSASSSMRSSSGKPFLKRHFSFGSKGSSRVM 420

Query: 421 SDNHHSTRRKGFFWAKSSKV 422
           SDN  STRRKGFFWAKSS+V
Sbjct: 421 SDN-PSTRRKGFFWAKSSRV 439

[Close]

BLAST of CmaCh20G008290 vs. NCBI nr
Match: gi|659122118|ref|XP_008460977.1| (PREDICTED: uncharacterized protein DDB_G0271670-like isoform X1 [Cucumis melo])

HSP 1 Score: 736.1 bits (1899), Expect = 3.4e-209
Identity = 387/441 (87.76%), Postives = 405/441 (91.84%), Query Frame = 1


Query: 1   MGSACCVAARENTIVSGSGSETLCRNMRYSPSWSFRWDNRGRVAGEETSINWFSDGVSRN 60
           MGSACCVAAR+ TIVSGSGSETLCRN+RYSPSWSFRWDNRGRVAGEETSINWFSD V RN
Sbjct: 1   MGSACCVAARDKTIVSGSGSETLCRNIRYSPSWSFRWDNRGRVAGEETSINWFSDSVGRN 60

Query: 61  D---------------SPLEHLRRRTWQKSPPPEGTTNNLRTPSSGQSNSRNVSTDVSLE 120
           D               SPLEHLRRR WQKSPPPEGTTN+L TPSSGQSNSRN+STDVSLE
Sbjct: 61  DRVELKCESAYASEDGSPLEHLRRRGWQKSPPPEGTTNHLGTPSSGQSNSRNLSTDVSLE 120

Query: 121 Q-VKEAMDSPTASYKSPAKLSLSLPSTSSLSTSPLSSQSYLPPTNSSLTRCTHRSPGHQL 180
           Q VKEA++SPTASYKSPAKLSLSLPSTSSLSTSPLSSQSYLPPTNSSLTRC+HRSPGH L
Sbjct: 121 QQVKEAIESPTASYKSPAKLSLSLPSTSSLSTSPLSSQSYLPPTNSSLTRCSHRSPGHHL 180

Query: 181 LRQGSDNRIRGLKSPGSYLASEDRPRLPSWSNESVRDSHGGSSDCWSVHAFSELMATSHR 240
           LRQ SD+RIRGLKS  SYLASEDRPRLPSWSNESVRDSHGGSSDCWSVHAFSELMATSHR
Sbjct: 181 LRQVSDSRIRGLKSSSSYLASEDRPRLPSWSNESVRDSHGGSSDCWSVHAFSELMATSHR 240

Query: 241 ERWSFDSDSFGFNGEKIARSSSRISTSSVDLQTCGVCSKLLTEKSSWSSQRIIANNELSV 300
           ERWSFDSDSFGFNGEKIARSSS+ISTSSVDLQTCGVCSKLLTEKSSWSSQRIIANNELSV
Sbjct: 241 ERWSFDSDSFGFNGEKIARSSSQISTSSVDLQTCGVCSKLLTEKSSWSSQRIIANNELSV 300

Query: 301 AAVLTCGHVYHADCLESMTPEIYKYDPACPVCTFGEKHTQKLSEKALKAEMDWKSLYKRS 360
           AAVLTCGHVYHADCLESMTPEI+KYDPACPVCTFGEKHTQKLSEKALKAEMDWKSLYKRS
Sbjct: 301 AAVLTCGHVYHADCLESMTPEIHKYDPACPVCTFGEKHTQKLSEKALKAEMDWKSLYKRS 360

Query: 361 KNCNADSHFE----SNNPFKNHARLEKGSRMSASSSTRSSSGKPFLKRHFSFGSKGSSRV 420
           K C ADS F+    +N+ FKN+ARLE+GS++SASSS RSSSGKPFLKRHFSFGSKGSSRV
Sbjct: 361 KKCIADSDFDGDFAANDRFKNNARLERGSKLSASSSMRSSSGKPFLKRHFSFGSKGSSRV 420

Query: 421 MSDNHHSTRRKGFFWAKSSKV 422
           MSDN  STRRKGFFWAKSS+V
Sbjct: 421 MSDN-PSTRRKGFFWAKSSRV 440

[Close]

BLAST of CmaCh20G008290 vs. NCBI nr
Match: gi|778669423|ref|XP_011649245.1| (PREDICTED: uncharacterized protein LOC101206081 isoform X4 [Cucumis sativus])

HSP 1 Score: 719.9 bits (1857), Expect = 2.5e-204
Identity = 378/440 (85.91%), Postives = 396/440 (90.00%), Query Frame = 1


Query: 1   MGSACCVAARENTIVSGSGSETLCRNMRYSPSWSFRWDNRGRVAGEETSINWFSDGVSRN 60
           MGSACCVAAR+ TIVSGSGSETLCRN+RYSPSWSFRWDNRGRVAGEETSINWFSD V RN
Sbjct: 1   MGSACCVAARDKTIVSGSGSETLCRNIRYSPSWSFRWDNRGRVAGEETSINWFSDSVGRN 60

Query: 61  D---------------SPLEHLRRRTWQKSPPPEGTTNNLRTPSSGQSNSRNVSTDVSLE 120
           D               SPLEHLRRR WQKSPPPE           GQSNSRN+STDVSLE
Sbjct: 61  DRAELKCESAYASEDGSPLEHLRRRGWQKSPPPE-----------GQSNSRNLSTDVSLE 120

Query: 121 QVKEAMDSPTASYKSPAKLSLSLPSTSSLSTSPLSSQSYLPPTNSSLTRCTHRSPGHQLL 180
           QVKEA++SPTASYKSPAKLSLSLPSTSSLSTSPLSSQSYLPPTNSSLTRC+HRSPGH LL
Sbjct: 121 QVKEAIESPTASYKSPAKLSLSLPSTSSLSTSPLSSQSYLPPTNSSLTRCSHRSPGHHLL 180

Query: 181 RQGSDNRIRGLKSPGSYLASEDRPRLPSWSNESVRDSHGGSSDCWSVHAFSELMATSHRE 240
           RQ SD+RIRGLKSP SYLASEDRPRLPSWSNESVRDSHGGSSDCWSVHAFSELMATSHRE
Sbjct: 181 RQVSDSRIRGLKSPSSYLASEDRPRLPSWSNESVRDSHGGSSDCWSVHAFSELMATSHRE 240

Query: 241 RWSFDSDSFGFNGEKIARSSSRISTSSVDLQTCGVCSKLLTEKSSWSSQRIIANNELSVA 300
           RWSFDSDSFGFNGEKIARS+S+ISTSSVDLQTCGVCSKLLTEKSSWSSQRIIANNELSVA
Sbjct: 241 RWSFDSDSFGFNGEKIARSNSQISTSSVDLQTCGVCSKLLTEKSSWSSQRIIANNELSVA 300

Query: 301 AVLTCGHVYHADCLESMTPEIYKYDPACPVCTFGEKHTQKLSEKALKAEMDWKSLYKRSK 360
           AVLTCGHVYHADCLESMTPEI+KYDPACPVCTFGEKHTQKLSEKALKAE+DWKSLYKRSK
Sbjct: 301 AVLTCGHVYHADCLESMTPEIHKYDPACPVCTFGEKHTQKLSEKALKAEIDWKSLYKRSK 360

Query: 361 NCNADSHFE----SNNPFKNHARLEKGSRMSASSSTRSSSGKPFLKRHFSFGSKGSSRVM 420
            C ADS F+    +N+PFKN+ARLE+GS++SASSS RSSSGKPFLKRHFSFGSKGSSRVM
Sbjct: 361 KCIADSDFDGDFAANDPFKNNARLERGSKLSASSSMRSSSGKPFLKRHFSFGSKGSSRVM 420

Query: 421 SDNHHSTRRKGFFWAKSSKV 422
           SDN   TRRKGFFWAKSSKV
Sbjct: 421 SDN-PPTRRKGFFWAKSSKV 428

The following BLAST results are available for this feature:

BLAST of CmaCh20G008290 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh20G008290 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LL82_CUCSA	1.8e-212	88.18	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G249790 PE=4 SV=1	[more]
M5W2R1_PRUPE	6.2e-149	67.88	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005921mg PE=4 SV=1	[more]
A0A061DYS5_THECC	2.4e-145	65.98	RING/U-box superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_006836 PE=4 S...	[more]
A0A061DYZ6_THECC	4.6e-144	65.83	RING/U-box superfamily protein isoform 3 OS=Theobroma cacao GN=TCM_006836 PE=4 S...	[more]
A0A0B0MTV0_GOSAR	8.9e-140	63.47	E3 ubiquitin-protein ligase TRIM50 OS=Gossypium arboreum GN=F383_28353 PE=4 SV=1	[more]

BLAST of CmaCh20G008290 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G39140.1	9.3e-88	46.78	RING/U-box superfamily protein	[more]
AT2G21500.2	1.4e-83	47.36	RING/U-box superfamily protein	[more]
AT1G75400.1	3.4e-66	42.79	RING/U-box superfamily protein	[more]
AT1G19680.1	2.6e-58	42.04	RING/U-box superfamily protein	[more]
AT1G14180.1	4.4e-13	29.69	RING/U-box superfamily protein	[more]

BLAST of CmaCh20G008290 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464702\|ref\|XP_004150068.1\|	2.5e-212	88.18	PREDICTED: uncharacterized protein LOC101206081 isoform X2 [Cucumis sativus]	[more]
gi\|778669415\|ref\|XP_011649243.1\|	6.2e-211	87.98	PREDICTED: uncharacterized protein LOC101206081 isoform X1 [Cucumis sativus]	[more]
gi\|659122120\|ref\|XP_008460978.1\|	1.4e-210	87.95	PREDICTED: uncharacterized protein DDB_G0271670-like isoform X2 [Cucumis melo]	[more]
gi\|659122118\|ref\|XP_008460977.1\|	3.4e-209	87.76	PREDICTED: uncharacterized protein DDB_G0271670-like isoform X1 [Cucumis melo]	[more]
gi\|778669423\|ref\|XP_011649245.1\|	2.5e-204	85.91	PREDICTED: uncharacterized protein LOC101206081 isoform X4 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G008290.1	CmaCh20G008290.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 258..316 score: 7.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 258..317 score: 10
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 249..317 score: 2.
None	No IPR available	PANTHER	PTHR31150	FAMILY NOT NAMED	coord: 1..421 score: 2.6E
None	No IPR available	PANTHER	PTHR31150:SF8	SUBFAMILY NOT NAMED	coord: 1..421 score: 2.6E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 257..317 score: 3.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh20G008290	Cucsa.377750	Cucumber (Gy14) v1	cgycmaB1039
CmaCh20G008290	Cucsa.109390	Cucumber (Gy14) v1	cgycmaB0253
CmaCh20G008290	Cla016584	Watermelon (97103) v1	cmawmB544
CmaCh20G008290	Cla015907	Watermelon (97103) v1	cmawmB526
CmaCh20G008290	Csa7G004050	Cucumber (Chinese Long) v2	cmacuB575
CmaCh20G008290	Csa2G249790	Cucumber (Chinese Long) v2	cmacuB542
CmaCh20G008290	MELO3C023321	Melon (DHL92) v3.5.1	cmameB503
CmaCh20G008290	MELO3C013445	Melon (DHL92) v3.5.1	cmameB512
CmaCh20G008290	ClCG02G004780	Watermelon (Charleston Gray)	cmawcgB485
CmaCh20G008290	ClCG11G004160	Watermelon (Charleston Gray)	cmawcgB477
CmaCh20G008290	CSPI02G12470	Wild cucumber (PI 183967)	cmacpiB547
CmaCh20G008290	CSPI07G00160	Wild cucumber (PI 183967)	cmacpiB580
CmaCh20G008290	CmoCh02G003840	Cucurbita moschata (Rifu)	cmacmoB554
CmaCh20G008290	Lsi11G011210	Bottle gourd (USVL1VR-Ls)	cmalsiB514
CmaCh20G008290	Lsi10G003950	Bottle gourd (USVL1VR-Ls)	cmalsiB507
CmaCh20G008290	Cp4.1LG15g05420	Cucurbita pepo (Zucchini)	cmacpeB561
CmaCh20G008290	Cp4.1LG16g02610	Cucurbita pepo (Zucchini)	cmacpeB565
CmaCh20G008290	Cp4.1LG05g12740	Cucurbita pepo (Zucchini)	cmacpeB585
CmaCh20G008290	MELO3C023321.2	Melon (DHL92) v3.6.1	cmamedB580
CmaCh20G008290	MELO3C013445.2	Melon (DHL92) v3.6.1	cmamedB588
CmaCh20G008290	CsaV3_7G000130	Cucumber (Chinese Long) v3	cmacucB0689
CmaCh20G008290	CsaV3_2G015010	Cucumber (Chinese Long) v3	cmacucB0651
CmaCh20G008290	Cla97C02G031770	Watermelon (97103) v2	cmawmbB570
CmaCh20G008290	Cla97C11G210890	Watermelon (97103) v2	cmawmbB567
CmaCh20G008290	Bhi10G001581	Wax gourd	cmawgoB0684
CmaCh20G008290	Bhi05G001120	Wax gourd	cmawgoB0682
CmaCh20G008290	CsGy7G000150	Cucumber (Gy14) v2	cgybcmaB956
CmaCh20G008290	CsGy2G012490	Cucumber (Gy14) v2	cgybcmaB218
CmaCh20G008290	Carg19399	Silver-seed gourd	carcmaB0441
CmaCh20G008290	Carg24149	Silver-seed gourd	carcmaB0418
CmaCh20G008290	Carg26790	Silver-seed gourd	carcmaB0138

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh20G008290	CmaCh02G003780	Cucurbita maxima (Rimu)	cmacmaB469

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh20G008290	Cucurbita pepo (Zucchini)	cmacpeB570
CmaCh20G008290	Cucurbita moschata (Rifu)	cmacmoB548
CmaCh20G008290	Cucurbita moschata (Rifu)	cmacmoB551
CmaCh20G008290	Cucumber (Chinese Long) v2	cmacuB546