CmaCh20G007970 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh20G007970
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionWRKY transcription factor 32
LocationCma_Chr20 : 3733279 .. 3735697 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGGAAGCAACAGGCAGGAGGAGGGGCATTTGACAGTCTTTTGGTTTTATAGTACAGGGGTAGTTTCGTCATTGGAGCAATATCGTTATGACAGTTGAGAAGCTACAGTTTTGATCCATTTTGCAAGCGTGGACAAATTAAGCTTGCTGACGAGGATTTAATTTTCAATATTTTTAAATTAAGTTTATTCTAAATTAATAAAAATACATTTGATTTTTATAGCATAAGCATCTTTTAGGTAGCAAATTTAAACAATAACTTTCAAAATCATTAAATCAACCTACAACCATTTAATCACTTTTTTTTTTTTTTTTTTTTTTTTAAGATATTTGAGTTTAGGTTGAAGCCAAAAAAGAAGAACCAGAAGAAGCAAAGAGAGCCGAGATTTGCTTTCATGACAAAGAGTGATATCGATCATCTCGACGATGGGTATCGGTGGCGAAAGTACGGTCAAAAAGCCGTGAAGAACAGTCCTTACCCTAGGTTTGTCTTCTTCATATTTTCATAATAATATGATATTTTTTTACTTTGAATCATTATTCATGATGAAATCGTTATACTGATAAAACAGAAGCTATTACCGTTGTACTACGGTAGGGTGTGGTGTGAAGAAGAGAGTGGAGCGATTGTCCAACGACCAATCGACCGTCGTTACAACTTACGAAGGCCAACACACCCATCAAAGTCCGATAATTCCACGAGGTAGTATCAGAGTCCTACCGGAATCCAATCTCGACGTTACTTCCACCACCGGACTTTTATTTNCCCGGTTTTTCAATTAATGTTTCGAAATTTTTAAGTCTGGTTAAAAAATTATACTTCACCAAATCTCTTGGTTTAATATTTAGATTTGGAATGTCATTTAACTTCCAACAATTAGGGTTACACGGTGATTAGTCATTTCTATCTCTCGATGGAGGGCAAGGGAAGGGATATAACTCAACGGTAGAGTGTTGCCTTGACATGGCGGAAGTCATCGATTCGAGCTTGATTATCCCTAAACCCAATGTGAGTTTTTCTATTTTTACTTGCTCCCCTGCCGTGATCGAATGAGAATGGATAAGAGACTCGTGGGATTGACGTGAGGGGGTGGGGATGGCTATATTTCTGGGAGCGAACTCCAGACAATATAAAACGCATTGATACAAGTTATGCCTTGGAATGAAATCTTAAATAGGGTGGAAATCTCCATTTGAATGGAAAATAGGAAAGTGAGTAGGGAAAGATATCTCTGTTAGTCAAACGAAGCAAGGGACAAACATTATAACTAACTATATAATATTGAAATTTGAGTTTATAAAAGTTAGGTTGTTATGAAATATTATTGAATTAATTAAGATTTTTTTTAATAGAAATTAAATTAAAAAATAGAAATAATCATTAATTTTTTTTTAATATATATATATATATAGATGAAAAAAAAAAAAATCATGTATGGAACTCTATCTGCGAAAAAATAAATGGAAAATTTTGTGAAAATAAAAATTGAAATAGGAGACAAGAATGGATAAGGCTCCTCTGCACCGTGGACATCTCTATGTTCAATTCCTCTAAATTAAATGTGTAGACAAAACATTCATTATCAGATGACTTGCTCGTTGCTCCATCCTTAACATTGTTGATCCAAAGAACAAGTAACATAAATTTGGTTAAGAAAAAGATCAAAGGTACGGGAAAAAATCATGGAAAAGAAATCACAGTAACCTTTCAAGGCCTAGAAGTGACTTCAATGAAAGTATCTTCTCTACATGCAATAGTTAGGCTGCCAATTAGAAGACCAAAGCTAAATTCTTCAGCTTAAGAACTTTCTTAAGAATTTCTCCACACATAAACTGCAGAGAAGCCTTTGGGAACCTCCAAGAAGCTGAAATTGCCTTTCTTTCCCTCGAAATGCACCGTTTAAGAACTTTATTTCAGAATGACTGTGAGATCTCACATCGGTTGGAGAGGAGAACGAAACATTCTTTATAAGAGTGTGGAAACCTCTTCCTAGCAGACGCGTTTTAAAAACTTTGAGGGAAAGTCCGAAAGGGAAAGTCCAAAGAGGACAATATCTACTAGGTAGATTTTGGGTGTTATAAAGACACTTTGTAAACGATTCCCATGTCAGTTTTTTTTCGTTAATGAACAATGAACTGAAAGTGCAATGCAACCACAAGTTTATGTCCGTATTTATATTGATAAATTGGTGGAAAAGGAAGATATCAAAGTTCTGAGGCAATGGAGGAAGAAGCAGGTTGGGTTGGGGTCTGGTTAGAGCAGAGTTCACAAGGGTTTCACATGGCTCTGTCTTTCAACTTGCAGTTTGGGCTCAGGGCTGAGAGGGCATCAGTGTTCCATTTTGGTCCTGAACAGTGTCCTACAGAATCAGCCATTGGTCAATTTGAGGACCAGCAGAAGATTCGAAAGGGCTAG

mRNA sequence

ATGGGAGGAAGCAACAGGCAGGAGGAGGGGCATTTGACAGTCTTTTGGTTTTATAGTACAGGGATATTTGAGTTTAGGTTGAAGCCAAAAAAGAAGAACCAGAAGAAGCAAAGAGAGCCGAGATTTGCTTTCATGACAAAGAGTGATATCGATCATCTCGACGATGGGTATCGGTGGCGAAAGTACGGTCAAAAAGCCGTGAAGAACAGTCCTTACCCTAGAAGCTATTACCGTTGTACTACGGTAGGGTGTGGTGTGAAGAAGAGAGTGGAGCGATTGTCCAACGACCAATCGACCGTCGTTACAACTTACGAAGGCCAACACACCCATCAAAGTCCGATAATTCCACGAGGTAGTATCAGAGTCCTACCGGAATCCAATCTCGACTTTGGGCTCAGGGCTGAGAGGGCATCAGTGTTCCATTTTGGTCCTGAACAGTGTCCTACAGAATCAGCCATTGGTCAATTTGAGGACCAGCAGAAGATTCGAAAGGGCTAG

Coding sequence (CDS)

ATGGGAGGAAGCAACAGGCAGGAGGAGGGGCATTTGACAGTCTTTTGGTTTTATAGTACAGGGATATTTGAGTTTAGGTTGAAGCCAAAAAAGAAGAACCAGAAGAAGCAAAGAGAGCCGAGATTTGCTTTCATGACAAAGAGTGATATCGATCATCTCGACGATGGGTATCGGTGGCGAAAGTACGGTCAAAAAGCCGTGAAGAACAGTCCTTACCCTAGAAGCTATTACCGTTGTACTACGGTAGGGTGTGGTGTGAAGAAGAGAGTGGAGCGATTGTCCAACGACCAATCGACCGTCGTTACAACTTACGAAGGCCAACACACCCATCAAAGTCCGATAATTCCACGAGGTAGTATCAGAGTCCTACCGGAATCCAATCTCGACTTTGGGCTCAGGGCTGAGAGGGCATCAGTGTTCCATTTTGGTCCTGAACAGTGTCCTACAGAATCAGCCATTGGTCAATTTGAGGACCAGCAGAAGATTCGAAAGGGCTAG

Protein sequence

MGGSNRQEEGHLTVFWFYSTGIFEFRLKPKKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRVERLSNDQSTVVTTYEGQHTHQSPIIPRGSIRVLPESNLDFGLRAERASVFHFGPEQCPTESAIGQFEDQQKIRKG
Homology
[Close]
BLAST of CmaCh20G007970 vs. Swiss-Prot
Match: WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.0e-43
Identity = 85/115 (73.91%), Postives = 93/115 (80.87%), Query Frame = 1 

Query: 26  RLKPKKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCG 85
           +LK KKKNQKK RE RFAF+TKSDID+LDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCG
Sbjct: 193 QLKAKKKNQKKAREARFAFLTKSDIDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCG 252

Query: 86  VKKRVERLSNDQSTVVTTYEGQHTHQSPIIPRGSIRVLPESNLDFGLRAERASVF 141
           VKKRVER S+D S V+TTYEGQHTH  P+ PRG I +L    LD G     +S F
Sbjct: 253 VKKRVERSSDDPSIVMTTYEGQHTHPFPMTPRGHIGMLTSPILDHGATTASSSSF 307

[Close]
BLAST of CmaCh20G007970 vs. Swiss-Prot
Match: WRK23_ARATH (Probable WRKY transcription factor 23 OS=Arabidopsis thaliana GN=WRKY23 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.6e-37
Identity = 76/116 (65.52%), Postives = 87/116 (75.00%), Query Frame = 1 

Query: 2   GGSNRQEEGHLTVFWFYSTGIFEFRLKPKKKNQKKQREPRFAFMTKSDIDHLDDGYRWRK 61
           GG ++QE+ H            + +LK KK NQK+QRE R AFMTKS++DHL+DGYRWRK
Sbjct: 133 GGEDQQEKSHT-----------KKQLKAKKNNQKRQREARVAFMTKSEVDHLEDGYRWRK 192

Query: 62  YGQKAVKNSPYPRSYYRCTTVGCGVKKRVERLSNDQSTVVTTYEGQHTHQSPIIPR 118
           YGQKAVKNSP+PRSYYRCTT  C VKKRVER   D STVVTTYEGQHTH SP+  R
Sbjct: 193 YGQKAVKNSPFPRSYYRCTTASCNVKKRVERSFRDPSTVVTTYEGQHTHISPLTSR 237

[Close]
BLAST of CmaCh20G007970 vs. Swiss-Prot
Match: WRK57_ARATH (Probable WRKY transcription factor 57 OS=Arabidopsis thaliana GN=WRKY57 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 7.5e-35
Identity = 70/97 (72.16%), Postives = 80/97 (82.47%), Query Frame = 1 

Query: 24  EFRLKPKKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVG 83
           E  +K KKK QK+ R+PRFAFMTKSD+D+L+DGYRWRKYGQKAVKNSP+PRSYYRCT   
Sbjct: 117 ETPVKEKKKAQKRIRQPRFAFMTKSDVDNLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSR 176

Query: 84  CGVKKRVERLSNDQSTVVTTYEGQHTHQSPIIPRGSI 121
           C VKKRVER S+D S V+TTYEGQH HQ+   PRG I
Sbjct: 177 CTVKKRVERSSDDPSIVITTYEGQHCHQTIGFPRGGI 213

[Close]
BLAST of CmaCh20G007970 vs. Swiss-Prot
Match: WRK28_ARATH (Probable WRKY transcription factor 28 OS=Arabidopsis thaliana GN=WRKY28 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.4e-33
Identity = 67/92 (72.83%), Postives = 73/92 (79.35%), Query Frame = 1 

Query: 28  KPKKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVK 87
           K KK   KKQREPR +FMTKS++DHL+DGYRWRKYGQKAVKNSPYPRSYYRCTT  C VK
Sbjct: 146 KTKKTEVKKQREPRVSFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVK 205

Query: 88  KRVERLSNDQSTVVTTYEGQHTHQSPIIPRGS 120
           KRVER   D + V+TTYEGQH H  P   RGS
Sbjct: 206 KRVERSFQDPTVVITTYEGQHNHPIPTNLRGS 237

[Close]
BLAST of CmaCh20G007970 vs. Swiss-Prot
Match: WRK71_ARATH (Probable WRKY transcription factor 71 OS=Arabidopsis thaliana GN=WRKY71 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.1e-33
Identity = 66/91 (72.53%), Postives = 74/91 (81.32%), Query Frame = 1 

Query: 30  KKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKR 89
           KKK +KK+RE R AFMTKS+IDHL+DGYRWRKYGQKAVKNSPYPRSYYRCTT  C VKKR
Sbjct: 112 KKKGEKKEREVRVAFMTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKR 171

Query: 90  VERLSNDQSTVVTTYEGQHTHQSPIIPRGSI 121
           VER   D S V+TTYEG+H H  P   RG++
Sbjct: 172 VERSFQDPSIVITTYEGKHNHPIPSTLRGTV 202

[Close]
BLAST of CmaCh20G007970 vs. TrEMBL
Match: A0A0A0L834_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G168410 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 5.9e-47
Identity = 91/100 (91.00%), Postives = 94/100 (94.00%), Query Frame = 1 

Query: 27  LKPKKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGV 86
           LKP KKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTT GCGV
Sbjct: 137 LKPIKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGV 196

Query: 87  KKRVERLSNDQSTVVTTYEGQHTHQSPIIPRGSIRVLPES 127
           KKRVER S D + VVTTYEGQHTHQSPI+PRGS+RVLPES
Sbjct: 197 KKRVERSSGDHTIVVTTYEGQHTHQSPIMPRGSLRVLPES 236

[Close]
BLAST of CmaCh20G007970 vs. TrEMBL
Match: D9ZJG1_MALDO (WRKY domain class transcription factor OS=Malus domestica GN=WRKY6 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.6e-44
Identity = 90/122 (73.77%), Postives = 102/122 (83.61%), Query Frame = 1 

Query: 26  RLKPKKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCG 85
           +LKPKKKNQK+QREPRFAFMTKS++D+LDDGYRWRKYGQKAVKNSPYPRSYYRCTT GCG
Sbjct: 167 QLKPKKKNQKRQREPRFAFMTKSEVDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCG 226

Query: 86  VKKRVERLSNDQSTVVTTYEGQHTHQSPIIPRGSIRVLPESNLDFG-LRAERASVFHFGP 145
           VKKRVER S+D STVVTTYEGQHTH SPI PRG++ + P  +   G + A  AS   FG 
Sbjct: 227 VKKRVERSSDDPSTVVTTYEGQHTHPSPITPRGTMGIAPLPHQSTGFISAAEASSNPFGV 286

Query: 146 EQ 147
           +Q
Sbjct: 287 QQ 288

[Close]
BLAST of CmaCh20G007970 vs. TrEMBL
Match: A0A140H8Q1_MANES (WRKY transcription factor 47 OS=Manihot esculenta PE=2 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.6e-44
Identity = 85/101 (84.16%), Postives = 93/101 (92.08%), Query Frame = 1 

Query: 26  RLKPKKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCG 85
           +LKPKKKNQK+QREPRFAFMTKS++DHLDDGYRWRKYGQKAVKNSPYPRSYYRCT+ GCG
Sbjct: 139 QLKPKKKNQKRQREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTSAGCG 198

Query: 86  VKKRVERLSNDQSTVVTTYEGQHTHQSPIIPRGSIRVLPES 127
           VKKRVER S D + VVTTYEGQHTH SPI PRGSI +LP+S
Sbjct: 199 VKKRVERSSEDPTIVVTTYEGQHTHPSPITPRGSIGLLPDS 239

[Close]
BLAST of CmaCh20G007970 vs. TrEMBL
Match: B9RZT1_RICCO (WRKY transcription factor, putative OS=Ricinus communis GN=RCOM_1000990 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 4.7e-44
Identity = 84/102 (82.35%), Postives = 93/102 (91.18%), Query Frame = 1 

Query: 26  RLKPKKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCG 85
           +LKPKKKNQK+QREPRFAFMTKS++DHLDDGYRWRKYGQKAVKNSPYPRSYYRCT+ GCG
Sbjct: 161 QLKPKKKNQKRQREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTSAGCG 220

Query: 86  VKKRVERLSNDQSTVVTTYEGQHTHQSPIIPRGSIRVLPESN 128
           VKKRVER S D + VVTTYEGQHTH SP+ PRGSI  LP+S+
Sbjct: 221 VKKRVERSSEDNTIVVTTYEGQHTHPSPVTPRGSIGFLPDSS 262

[Close]
BLAST of CmaCh20G007970 vs. TrEMBL
Match: S5CFS2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=WRKY23 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.4e-43
Identity = 84/101 (83.17%), Postives = 92/101 (91.09%), Query Frame = 1 

Query: 26  RLKPKKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCG 85
           +LKPKKKNQK+QREPRFAFMTKS++DHLDDGYRWRKYGQKAVKNSPYPRSYYRCT+ GCG
Sbjct: 156 QLKPKKKNQKRQREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTSAGCG 215

Query: 86  VKKRVERLSNDQSTVVTTYEGQHTHQSPIIPRGSIRVLPES 127
           VKKRVER S D + VVTTYEGQHTH SPI PRGSI +L +S
Sbjct: 216 VKKRVERSSEDPTIVVTTYEGQHTHPSPITPRGSIAILQDS 256

[Close]
BLAST of CmaCh20G007970 vs. TAIR10
Match: AT5G49520.1 (AT5G49520.1 WRKY DNA-binding protein 48)

HSP 1 Score: 176.8 bits (447), Expect = 1.1e-44
Identity = 85/115 (73.91%), Postives = 93/115 (80.87%), Query Frame = 1 

Query: 26  RLKPKKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCG 85
           +LK KKKNQKK RE RFAF+TKSDID+LDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCG
Sbjct: 193 QLKAKKKNQKKAREARFAFLTKSDIDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCG 252

Query: 86  VKKRVERLSNDQSTVVTTYEGQHTHQSPIIPRGSIRVLPESNLDFGLRAERASVF 141
           VKKRVER S+D S V+TTYEGQHTH  P+ PRG I +L    LD G     +S F
Sbjct: 253 VKKRVERSSDDPSIVMTTYEGQHTHPFPMTPRGHIGMLTSPILDHGATTASSSSF 307

[Close]
BLAST of CmaCh20G007970 vs. TAIR10
Match: AT2G47260.1 (AT2G47260.1 WRKY DNA-binding protein 23)

HSP 1 Score: 157.1 bits (396), Expect = 9.1e-39
Identity = 76/116 (65.52%), Postives = 87/116 (75.00%), Query Frame = 1 

Query: 2   GGSNRQEEGHLTVFWFYSTGIFEFRLKPKKKNQKKQREPRFAFMTKSDIDHLDDGYRWRK 61
           GG ++QE+ H            + +LK KK NQK+QRE R AFMTKS++DHL+DGYRWRK
Sbjct: 133 GGEDQQEKSHT-----------KKQLKAKKNNQKRQREARVAFMTKSEVDHLEDGYRWRK 192

Query: 62  YGQKAVKNSPYPRSYYRCTTVGCGVKKRVERLSNDQSTVVTTYEGQHTHQSPIIPR 118
           YGQKAVKNSP+PRSYYRCTT  C VKKRVER   D STVVTTYEGQHTH SP+  R
Sbjct: 193 YGQKAVKNSPFPRSYYRCTTASCNVKKRVERSFRDPSTVVTTYEGQHTHISPLTSR 237

[Close]
BLAST of CmaCh20G007970 vs. TAIR10
Match: AT1G69310.1 (AT1G69310.1 WRKY DNA-binding protein 57)

HSP 1 Score: 148.3 bits (373), Expect = 4.2e-36
Identity = 70/97 (72.16%), Postives = 80/97 (82.47%), Query Frame = 1 

Query: 24  EFRLKPKKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVG 83
           E  +K KKK QK+ R+PRFAFMTKSD+D+L+DGYRWRKYGQKAVKNSP+PRSYYRCT   
Sbjct: 117 ETPVKEKKKAQKRIRQPRFAFMTKSDVDNLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSR 176

Query: 84  CGVKKRVERLSNDQSTVVTTYEGQHTHQSPIIPRGSI 121
           C VKKRVER S+D S V+TTYEGQH HQ+   PRG I
Sbjct: 177 CTVKKRVERSSDDPSIVITTYEGQHCHQTIGFPRGGI 213

[Close]
BLAST of CmaCh20G007970 vs. TAIR10
Match: AT4G18170.1 (AT4G18170.1 WRKY DNA-binding protein 28)

HSP 1 Score: 144.1 bits (362), Expect = 7.9e-35
Identity = 67/92 (72.83%), Postives = 73/92 (79.35%), Query Frame = 1 

Query: 28  KPKKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVK 87
           K KK   KKQREPR +FMTKS++DHL+DGYRWRKYGQKAVKNSPYPRSYYRCTT  C VK
Sbjct: 146 KTKKTEVKKQREPRVSFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVK 205

Query: 88  KRVERLSNDQSTVVTTYEGQHTHQSPIIPRGS 120
           KRVER   D + V+TTYEGQH H  P   RGS
Sbjct: 206 KRVERSFQDPTVVITTYEGQHNHPIPTNLRGS 237

[Close]
BLAST of CmaCh20G007970 vs. TAIR10
Match: AT1G29860.1 (AT1G29860.1 WRKY DNA-binding protein 71)

HSP 1 Score: 142.9 bits (359), Expect = 1.8e-34
Identity = 66/91 (72.53%), Postives = 74/91 (81.32%), Query Frame = 1 

Query: 30  KKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKR 89
           KKK +KK+RE R AFMTKS+IDHL+DGYRWRKYGQKAVKNSPYPRSYYRCTT  C VKKR
Sbjct: 112 KKKGEKKEREVRVAFMTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKR 171

Query: 90  VERLSNDQSTVVTTYEGQHTHQSPIIPRGSI 121
           VER   D S V+TTYEG+H H  P   RG++
Sbjct: 172 VERSFQDPSIVITTYEGKHNHPIPSTLRGTV 202

[Close]
BLAST of CmaCh20G007970 vs. NCBI nr
Match: gi|778679105|ref|XP_011651087.1| (PREDICTED: probable WRKY transcription factor 48 [Cucumis sativus])

HSP 1 Score: 195.3 bits (495), Expect = 8.5e-47
Identity = 91/100 (91.00%), Postives = 94/100 (94.00%), Query Frame = 1 

Query: 27  LKPKKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGV 86
           LKP KKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTT GCGV
Sbjct: 137 LKPIKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGV 196

Query: 87  KKRVERLSNDQSTVVTTYEGQHTHQSPIIPRGSIRVLPES 127
           KKRVER S D + VVTTYEGQHTHQSPI+PRGS+RVLPES
Sbjct: 197 KKRVERSSGDHTIVVTTYEGQHTHQSPIMPRGSLRVLPES 236

[Close]
BLAST of CmaCh20G007970 vs. NCBI nr
Match: gi|659077791|ref|XP_008439387.1| (PREDICTED: probable WRKY transcription factor 48 [Cucumis melo])

HSP 1 Score: 192.6 bits (488), Expect = 5.5e-46
Identity = 89/100 (89.00%), Postives = 94/100 (94.00%), Query Frame = 1 

Query: 27  LKPKKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGV 86
           ++ KKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTT GCGV
Sbjct: 137 VETKKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGV 196

Query: 87  KKRVERLSNDQSTVVTTYEGQHTHQSPIIPRGSIRVLPES 127
           KKRVER S D + VVTTYEGQHTHQSPI+PRGS+RVLPES
Sbjct: 197 KKRVERSSGDHTIVVTTYEGQHTHQSPIMPRGSLRVLPES 236

[Close]
BLAST of CmaCh20G007970 vs. NCBI nr
Match: gi|694393330|ref|XP_009372109.1| (PREDICTED: probable WRKY transcription factor 48 [Pyrus x bretschneideri])

HSP 1 Score: 191.0 bits (484), Expect = 1.6e-45
Identity = 91/123 (73.98%), Postives = 103/123 (83.74%), Query Frame = 1 

Query: 26  RLKPKKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCG 85
           +LKPKKKNQK+QREPRFAFMTKS++D+LDDGYRWRKYGQKAVKNSPYPRSYYRCTT GCG
Sbjct: 167 QLKPKKKNQKRQREPRFAFMTKSEVDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCG 226

Query: 86  VKKRVERLSNDQSTVVTTYEGQHTHQSPIIPRGSIRVLPESNLDFG-LRAERASVFHFGP 145
           VKKRVER S+D STVVTTYEGQHTH SPI PRG++ + P  +   G + A  AS   FG 
Sbjct: 227 VKKRVERSSDDPSTVVTTYEGQHTHPSPITPRGTMGIAPLPHQSTGFISAAEASSNPFGV 286

Query: 146 EQC 148
           +QC
Sbjct: 287 QQC 289

[Close]
BLAST of CmaCh20G007970 vs. NCBI nr
Match: gi|658309565|ref|NP_001281064.1| (probable WRKY transcription factor 48 [Malus domestica])

HSP 1 Score: 187.2 bits (474), Expect = 2.3e-44
Identity = 90/122 (73.77%), Postives = 102/122 (83.61%), Query Frame = 1 

Query: 26  RLKPKKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCG 85
           +LKPKKKNQK+QREPRFAFMTKS++D+LDDGYRWRKYGQKAVKNSPYPRSYYRCTT GCG
Sbjct: 167 QLKPKKKNQKRQREPRFAFMTKSEVDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCG 226

Query: 86  VKKRVERLSNDQSTVVTTYEGQHTHQSPIIPRGSIRVLPESNLDFG-LRAERASVFHFGP 145
           VKKRVER S+D STVVTTYEGQHTH SPI PRG++ + P  +   G + A  AS   FG 
Sbjct: 227 VKKRVERSSDDPSTVVTTYEGQHTHPSPITPRGTMGIAPLPHQSTGFISAAEASSNPFGV 286

Query: 146 EQ 147
           +Q
Sbjct: 287 QQ 288

[Close]
BLAST of CmaCh20G007970 vs. NCBI nr
Match: gi|1003003090|gb|AMO00415.1| (WRKY transcription factor 47 [Manihot esculenta])

HSP 1 Score: 186.0 bits (471), Expect = 5.2e-44
Identity = 85/101 (84.16%), Postives = 93/101 (92.08%), Query Frame = 1 

Query: 26  RLKPKKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCG 85
           +LKPKKKNQK+QREPRFAFMTKS++DHLDDGYRWRKYGQKAVKNSPYPRSYYRCT+ GCG
Sbjct: 139 QLKPKKKNQKRQREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTSAGCG 198

Query: 86  VKKRVERLSNDQSTVVTTYEGQHTHQSPIIPRGSIRVLPES 127
           VKKRVER S D + VVTTYEGQHTH SPI PRGSI +LP+S
Sbjct: 199 VKKRVERSSEDPTIVVTTYEGQHTHPSPITPRGSIGLLPDS 239

The following BLAST results are available for this feature:
BLAST of CmaCh20G007970 vs. Swiss-Prot
Match NameE-valueIdentityDescription
WRK48_ARATH2.0e-4373.91Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=... [more]
WRK23_ARATH1.6e-3765.52Probable WRKY transcription factor 23 OS=Arabidopsis thaliana GN=WRKY23 PE=2 SV=... [more]
WRK57_ARATH7.5e-3572.16Probable WRKY transcription factor 57 OS=Arabidopsis thaliana GN=WRKY57 PE=2 SV=... [more]
WRK28_ARATH1.4e-3372.83Probable WRKY transcription factor 28 OS=Arabidopsis thaliana GN=WRKY28 PE=2 SV=... [more]
WRK71_ARATH3.1e-3372.53Probable WRKY transcription factor 71 OS=Arabidopsis thaliana GN=WRKY71 PE=2 SV=... [more]
BLAST of CmaCh20G007970 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L834_CUCSA5.9e-4791.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G168410 PE=4 SV=1[more]
D9ZJG1_MALDO1.6e-4473.77WRKY domain class transcription factor OS=Malus domestica GN=WRKY6 PE=2 SV=1[more]
A0A140H8Q1_MANES3.6e-4484.16WRKY transcription factor 47 OS=Manihot esculenta PE=2 SV=1[more]
B9RZT1_RICCO4.7e-4482.35WRKY transcription factor, putative OS=Ricinus communis GN=RCOM_1000990 PE=4 SV=... [more]
S5CFS2_JATCU1.4e-4383.17Uncharacterized protein OS=Jatropha curcas GN=WRKY23 PE=4 SV=1[more]
BLAST of CmaCh20G007970 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G49520.11.1e-4473.91 WRKY DNA-binding protein 48[more]
AT2G47260.19.1e-3965.52 WRKY DNA-binding protein 23[more]
AT1G69310.14.2e-3672.16 WRKY DNA-binding protein 57[more]
AT4G18170.17.9e-3572.83 WRKY DNA-binding protein 28[more]
AT1G29860.11.8e-3472.53 WRKY DNA-binding protein 71[more]
BLAST of CmaCh20G007970 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778679105|ref|XP_011651087.1|8.5e-4791.00PREDICTED: probable WRKY transcription factor 48 [Cucumis sativus][more]
gi|659077791|ref|XP_008439387.1|5.5e-4689.00PREDICTED: probable WRKY transcription factor 48 [Cucumis melo][more]
gi|694393330|ref|XP_009372109.1|1.6e-4573.98PREDICTED: probable WRKY transcription factor 48 [Pyrus x bretschneideri][more]
gi|658309565|ref|NP_001281064.1|2.3e-4473.77probable WRKY transcription factor 48 [Malus domestica][more]
gi|1003003090|gb|AMO00415.1|5.2e-4484.16WRKY transcription factor 47 [Manihot esculenta][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003657WRKY_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0052542 defense response by callose deposition
biological_process GO:0042742 defense response to bacterium
biological_process GO:0035556 intracellular signal transduction
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0015824 proline transport
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0002679 respiratory burst involved in defense response
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh20G007970.1CmaCh20G007970.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003657WRKY domainGENE3DG3DSA:2.20.25.80coord: 38..113
score: 1.5
IPR003657WRKY domainPFAMPF03106WRKYcoord: 54..111
score: 4.3
IPR003657WRKY domainSMARTSM00774WRKY_clscoord: 53..112
score: 8.4
IPR003657WRKY domainPROFILEPS50811WRKYcoord: 48..113
score: 31
IPR003657WRKY domainunknownSSF118290WRKY DNA-binding domaincoord: 45..113
score: 1.26
NoneNo IPR availablePANTHERPTHR31221FAMILY NOT NAMEDcoord: 27..146
score: 9.3
NoneNo IPR availablePANTHERPTHR31221:SF13WRKY TRANSCRIPTION FACTOR 48-RELATEDcoord: 27..146
score: 9.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh20G007970Cucumber (Gy14) v2cgybcmaB218
CmaCh20G007970Cucumber (Gy14) v2cgybcmaB956
CmaCh20G007970Melon (DHL92) v3.6.1cmamedB570
CmaCh20G007970Melon (DHL92) v3.6.1cmamedB587
CmaCh20G007970Silver-seed gourdcarcmaB0441
CmaCh20G007970Silver-seed gourdcarcmaB0599
CmaCh20G007970Silver-seed gourdcarcmaB1144
CmaCh20G007970Cucumber (Chinese Long) v3cmacucB0651
CmaCh20G007970Cucumber (Chinese Long) v3cmacucB0687
CmaCh20G007970Watermelon (97103) v2cmawmbB567
CmaCh20G007970Watermelon (97103) v2cmawmbB570
CmaCh20G007970Wax gourdcmawgoB0677
CmaCh20G007970Wax gourdcmawgoB0684
CmaCh20G007970Cucurbita maxima (Rimu)cmacmaB155
CmaCh20G007970Cucurbita maxima (Rimu)cmacmaB469
CmaCh20G007970Cucurbita maxima (Rimu)cmacmaB444
CmaCh20G007970Cucumber (Gy14) v1cgycmaB0479
CmaCh20G007970Cucumber (Gy14) v1cgycmaB1052
CmaCh20G007970Cucurbita moschata (Rifu)cmacmoB542
CmaCh20G007970Cucurbita moschata (Rifu)cmacmoB548
CmaCh20G007970Cucurbita moschata (Rifu)cmacmoB551
CmaCh20G007970Cucurbita moschata (Rifu)cmacmoB554
CmaCh20G007970Wild cucumber (PI 183967)cmacpiB547
CmaCh20G007970Wild cucumber (PI 183967)cmacpiB580
CmaCh20G007970Cucumber (Chinese Long) v2cmacuB542
CmaCh20G007970Cucumber (Chinese Long) v2cmacuB573
CmaCh20G007970Melon (DHL92) v3.5.1cmameB490
CmaCh20G007970Melon (DHL92) v3.5.1cmameB510
CmaCh20G007970Watermelon (Charleston Gray)cmawcgB477
CmaCh20G007970Watermelon (97103) v1cmawmB526
CmaCh20G007970Watermelon (97103) v1cmawmB544
CmaCh20G007970Cucurbita pepo (Zucchini)cmacpeB565
CmaCh20G007970Cucurbita pepo (Zucchini)cmacpeB570
CmaCh20G007970Cucurbita pepo (Zucchini)cmacpeB585
CmaCh20G007970Bottle gourd (USVL1VR-Ls)cmalsiB507
CmaCh20G007970Bottle gourd (USVL1VR-Ls)cmalsiB514