CmaCh20G006320 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh20G006320
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionAPO RNA-binding protein
LocationCma_Chr20 : 2943975 .. 2946458 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCATTTTGATCCATTGCCCTCGTCTCTGTGGCGCCCTCGTTTTCCCTCTGGACATCTGGAACTGCAAATCTTCATTTGGTCTCACAATTCTGCAAATTAAGTCTATGGAAATGCCTGTTCTTCCTCCTGTCCGCGAATCTGGCTTCAATTCTCCGTCGGCGTCGCTGTTAGTTGTTTCATCTTGTCTCTGAAAGCTCTCTGTCTCTCTGCGGTCTTCTCTCGAAATCTCATCCTTTGTTCTTTAAATCATCTATCTTACTCGCAACCCGAGCACTTTCGCCGTTGAATTCGAAGGCTCATGTGATTGGATTAAGATCTTAATTTATGCCTTCAAGCTTGTTGCTTGTCGTTTTCCTAAGATTTGATAAATGTTAGCGCTCGCATCATGAAAACTATGCCTTTTATGGCTCTTAGAAGGAAGTTCTGCGAGAATATTGTGCAGGAATTCATGCTACATCGATGCTACAGTTCTAAAGTCGATTTGAAGAAGCTTCGTCCAATGATTTTGAAGAGAATTCAAAATCGGGCTAATAACTGTCCTATAAAGGGTCTAATTCCAGTGGCACAGCAAGTCTTTGAAGCTAGGGCAATACTTATTCATGGAGTTTCCACTCTTCTCAAAGAATTTCCGGTTGTCTCTTGCAAGTCAGTGTCCCGGGAACAAACTATCTTTAATTTCTCATTTTTGTGTTATGATTTTACTCTGTTTCGTTTTCTTTTACTTAGTTTTTATCTGAAGTTGCATGTCCCTTGAGCTAGTATGTGTAATAGGAACGTACCATTTTGAAATGCTGATTGGCCTTGCTTATCATCTAGCTATTACCTGACCATTCCTGCGCAGGTAGTGAGGTCAAAAAATTCATCAATGCATATTATCTAGTTCTTTATGCACACTTGGGCCGTCTGTGAAGTCTGTTCTTTCTGAAATTTAGATTGAACAATCCTGAGGTATTAATATGAATGCATGTTTGAGAATTCTGCTTCTAAAATTCGTAGATTACTGGAGGTGCCCGGAATTCATGAATTCTCTGGTAAAGGGGAGTCGAGGTTGAATTCTTTGGGCCCTTTGTATACACTGCCCGTCGGTCATACCGATTGAATGGTCCGGTGAAGTGTTCGGATCGCGATGACGTGGGCGGTTTGCTGCCTGCGACATCATGAGAAGTTCTCATTAAACCTTATCATTTAGAGGAAGAAAAAGTTGTAACAAGGTTTCCGTAGGTGAACCTGCAGAAGGATCATTGTCGATGCCTAAACATCAAACGACCCATGAACACGTTTAAGTCTGTTCTTTTTGAAGATTATATTAAAAACTCTCCGCTGTTAACGTGAATACATGTTTGTGAAGGCTGTTTCTGATACTTGTAGGATCATTTTGTTGTTTTTATAGATTTTGTCCAGAAGTATATGTTGGTGAGAAAGGTCATCTGATACGAAGCTGTGGCGGTTACAAACGCGGGCCTAAGAATCAGGTTCATGAGTGGATCAGAGGTGGTTTGAATGATGTCCTTGTCCCAGTAGAAGCATTTCACCGCCATCACATTTTCGAAAAGGTTAATGAGCATGATGAGAGGTTCAAGTTTGAGCGTGTTCCAGCAGTTGTGGAACTATGCTGGCAAGCTGGAGCCAATACAAATGATGAAAATCTGTCTTCAAGCACTTGGAATTCAGTTGGTGGTGGTGGTGGTGGTGGCTCAGGCAGGGATGAACCTTTATCAGGTAATGAGATGAGGCTTTTGGCAACCGAAACTCTCAGGGCGTGGGAAACAGTTCGAACGGGCGTGCAGAAACTGTTAATGGTATATCCTGCTAAGATCTGTAATTACTGCTCAGACGTTCATGTTGGGCCATCAGTACACAAAGCTAGACCATGTGGAGTTTTTAAATGTGAGAGTTGGCGAGGATCCCACTTCTGGGAGAAGGCGGATGTAGATGATTTAGTTCCTCCGAAGATCGTATGGCATCGGCGACCTCAAGATCCTCCCGTGCTCGTCGACGAAGGGAGGGATTATTACGGGCACTCGCCAGCAGTCCTGGCTCTTTGCACACATGCTGGTGCCATTGCACCACCTAAGTATCATTGTATGATGAAAGTTCAAGGCTTACCACCTCAGAGTCACCTCAAGCTATGAAATCTTCTTTTGTTCGACTTCACATGGAGCTTGACAAGAACACTCGACTCGATTACAGTTCATGACCTTCAGGTGACCGTGCCTATTTATTTTCTTTCTTCCTGCTTTATCTGTTTGGTTGATCTAGTAAACATATAGAAAAAGTAACATGATGAACATCAAGCATAGCAACTTGGGAAAAGTTATCAAAAAGTTGAAGAATTTTGAACTTGAGAATGTCTTGTAGATTCGTCTTTCATTCTTTTCAGTAGAATATTCATGTCACGGGAGGCACTTTATAGAAAAGTTGGATGTAAAATCTAGATTTATATCCCTGCTTAGAAATTGTTGTTTTTTTTTACCCAACTTTAT

mRNA sequence

TTCATTTTGATCCATTGCCCTCGTCTCTGTGGCGCCCTCGTTTTCCCTCTGGACATCTGGAACTGCAAATCTTCATTTGGTCTCACAATTCTGCAAATTAAGTCTATGGAAATGCCTGTTCTTCCTCCTGTCCGCGAATCTGGCTTCAATTCTCCGTCGGCGTCGCTGTTAGTTGTTTCATCTTGTCTCTGAAAGCTCTCTGTCTCTCTGCGGTCTTCTCTCGAAATCTCATCCTTTGTTCTTTAAATCATCTATCTTACTCGCAACCCGAGCACTTTCGCCGTTGAATTCGAAGGCTCATGTGATTGGATTAAGATCTTAATTTATGCCTTCAAGCTTGTTGCTTGTCGTTTTCCTAAGATTTGATAAATGTTAGCGCTCGCATCATGAAAACTATGCCTTTTATGGCTCTTAGAAGGAAGTTCTGCGAGAATATTGTGCAGGAATTCATGCTACATCGATGCTACAGTTCTAAAGTCGATTTGAAGAAGCTTCGTCCAATGATTTTGAAGAGAATTCAAAATCGGGCTAATAACTGTCCTATAAAGGGTCTAATTCCAGTGGCACAGCAAGTCTTTGAAGCTAGGGCAATACTTATTCATGGAGTTTCCACTCTTCTCAAAGAATTTCCGGTTGTCTCTTGCAAATTTTGTCCAGAAGTATATGTTGGTGAGAAAGGTCATCTGATACGAAGCTGTGGCGGTTACAAACGCGGGCCTAAGAATCAGGTTCATGAGTGGATCAGAGGTGGTTTGAATGATGTCCTTGTCCCAGTAGAAGCATTTCACCGCCATCACATTTTCGAAAAGGTTAATGAGCATGATGAGAGGTTCAAGTTTGAGCGTGTTCCAGCAGTTGTGGAACTATGCTGGCAAGCTGGAGCCAATACAAATGATGAAAATCTGTCTTCAAGCACTTGGAATTCAGTTGGTGGTGGTGGTGGTGGTGGCTCAGGCAGGGATGAACCTTTATCAGGTAATGAGATGAGGCTTTTGGCAACCGAAACTCTCAGGGCGTGGGAAACAGTTCGAACGGGCGTGCAGAAACTGTTAATGGTATATCCTGCTAAGATCTGTAATTACTGCTCAGACGTTCATGTTGGGCCATCAGTACACAAAGCTAGACCATGTGGAGTTTTTAAATGTGAGAGTTGGCGAGGATCCCACTTCTGGGAGAAGGCGGATGTAGATGATTTAGTTCCTCCGAAGATCGTATGGCATCGGCGACCTCAAGATCCTCCCGTGCTCGTCGACGAAGGGAGGGATTATTACGGGCACTCGCCAGCAGTCCTGGCTCTTTGCACACATGCTGGTGCCATTGCACCACCTAAGTATCATTGTATGATGAAAGTTCAAGGCTTACCACCTCAGAGTCACCTCAAGCTATGAAATCTTCTTTTGTTCGACTTCACATGGAGCTTGACAAGAACACTCGACTCGATTACAGTTCATGACCTTCAGGTGACCGTGCCTATTTATTTTCTTTCTTCCTGCTTTATCTGTTTGGTTGATCTAGTAAACATATAGAAAAAGTAACATGATGAACATCAAGCATAGCAACTTGGGAAAAGTTATCAAAAAGTTGAAGAATTTTGAACTTGAGAATGTCTTGTAGATTCGTCTTTCATTCTTTTCAGTAGAATATTCATGTCACGGGAGGCACTTTATAGAAAAGTTGGATGTAAAATCTAGATTTATATCCCTGCTTAGAAATTGTTGTTTTTTTTTACCCAACTTTAT

Coding sequence (CDS)

ATGAAAACTATGCCTTTTATGGCTCTTAGAAGGAAGTTCTGCGAGAATATTGTGCAGGAATTCATGCTACATCGATGCTACAGTTCTAAAGTCGATTTGAAGAAGCTTCGTCCAATGATTTTGAAGAGAATTCAAAATCGGGCTAATAACTGTCCTATAAAGGGTCTAATTCCAGTGGCACAGCAAGTCTTTGAAGCTAGGGCAATACTTATTCATGGAGTTTCCACTCTTCTCAAAGAATTTCCGGTTGTCTCTTGCAAATTTTGTCCAGAAGTATATGTTGGTGAGAAAGGTCATCTGATACGAAGCTGTGGCGGTTACAAACGCGGGCCTAAGAATCAGGTTCATGAGTGGATCAGAGGTGGTTTGAATGATGTCCTTGTCCCAGTAGAAGCATTTCACCGCCATCACATTTTCGAAAAGGTTAATGAGCATGATGAGAGGTTCAAGTTTGAGCGTGTTCCAGCAGTTGTGGAACTATGCTGGCAAGCTGGAGCCAATACAAATGATGAAAATCTGTCTTCAAGCACTTGGAATTCAGTTGGTGGTGGTGGTGGTGGTGGCTCAGGCAGGGATGAACCTTTATCAGGTAATGAGATGAGGCTTTTGGCAACCGAAACTCTCAGGGCGTGGGAAACAGTTCGAACGGGCGTGCAGAAACTGTTAATGGTATATCCTGCTAAGATCTGTAATTACTGCTCAGACGTTCATGTTGGGCCATCAGTACACAAAGCTAGACCATGTGGAGTTTTTAAATGTGAGAGTTGGCGAGGATCCCACTTCTGGGAGAAGGCGGATGTAGATGATTTAGTTCCTCCGAAGATCGTATGGCATCGGCGACCTCAAGATCCTCCCGTGCTCGTCGACGAAGGGAGGGATTATTACGGGCACTCGCCAGCAGTCCTGGCTCTTTGCACACATGCTGGTGCCATTGCACCACCTAAGTATCATTGTATGATGAAAGTTCAAGGCTTACCACCTCAGAGTCACCTCAAGCTATGA

Protein sequence

MKTMPFMALRRKFCENIVQEFMLHRCYSSKVDLKKLRPMILKRIQNRANNCPIKGLIPVAQQVFEARAILIHGVSTLLKEFPVVSCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWIRGGLNDVLVPVEAFHRHHIFEKVNEHDERFKFERVPAVVELCWQAGANTNDENLSSSTWNSVGGGGGGGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPAKICNYCSDVHVGPSVHKARPCGVFKCESWRGSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGHSPAVLALCTHAGAIAPPKYHCMMKVQGLPPQSHLKL
Homology
[Close]
BLAST of CmaCh20G006320 vs. Swiss-Prot
Match: APO4_ARATH (APO protein 4, mitochondrial OS=Arabidopsis thaliana GN=APO4 PE=2 SV=2)

HSP 1 Score: 356.7 bits (914), Expect = 2.8e-97
Identity = 164/294 (55.78%), Postives = 216/294 (73.47%), Query Frame = 1 

Query: 32  DLKKLRPMILKRIQNRANNCPIKGLIPVAQQVFEARAILIHGVSTLLKEFPVVSCKFCPE 91
           DL+KLRPMILKRI+NRA + P+K ++PVA+++  AR  LI  ++ LLK FPV++CKFC E
Sbjct: 34  DLRKLRPMILKRIENRAKDYPVKEIVPVAEEILIARKNLISNIAALLKVFPVLTCKFCSE 93

Query: 92  VYVGEKGHLIRSCGGYKRGPKNQVHEWIRGGLNDVLVPVEAFHRHHIFEKVNEHDERFKF 151
           V+VG++GHLI +C  Y R   N++HEW+ G +ND+LVPVE++H H+I + V  H ERF +
Sbjct: 94  VFVGKEGHLIETCRSYIRRGNNRLHEWVPGSINDILVPVESYHLHNISQGVIRHQERFDY 153

Query: 152 ERVPAVVELCWQAGANTNDENLSSSTWNSVGGGGGGGSGRDEPLSGNEMRLLATETLRAW 211
           +RVPA++ELC QAGA   +E L    ++ +             L   +++ +    L AW
Sbjct: 154 DRVPAILELCCQAGAIHPEEILQ---YSEIHDNPQISEEDIRSLPAGDLKYVGANALMAW 213

Query: 212 ETVRTGVQKLLMVYPAKICNYCSDVHVGPSVHKARPCGVFKCESWRGSHFWEKADVDDLV 271
           E VR GV+KLL+VYP+K+C  C +VHVGPS HKAR CGVFK ESWRG+H+WEKA V+DLV
Sbjct: 214 EKVRAGVKKLLLVYPSKVCKRCKEVHVGPSGHKARLCGVFKYESWRGTHYWEKAGVNDLV 273

Query: 272 PPKIVWHRRPQDPPVLVDEGRDYYGHSPAVLALCTHAGAIAPPKYHCMMKVQGL 326
           P K+VWHRRPQDP VLVDEGR YYGH+PA+++LC+H GAI P KY C MK QGL
Sbjct: 274 PEKMVWHRRPQDPVVLVDEGRSYYGHAPAIVSLCSHTGAIVPVKYACKMKPQGL 324

[Close]
BLAST of CmaCh20G006320 vs. Swiss-Prot
Match: APO2_ARATH (APO protein 2, chloroplastic OS=Arabidopsis thaliana GN=APO2 PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.3e-54
Identity = 113/305 (37.05%), Postives = 160/305 (52.46%), Query Frame = 1 

Query: 49  NNCPIKGLIPVAQQVFEARAILIHGVSTLLKEFPVVSCKFCPEVYVGEKGHLIRSCGGYK 108
           N   +K L+P+A +V+ AR  LI+ +  L+K   V +C +C E++VG  GH  +SC G  
Sbjct: 126 NGMVVKSLVPLAYKVYNARIRLINNLHRLMKVVRVNACGWCNEIHVGPYGHPFKSCKGPN 185

Query: 109 RGPKNQVHEWIRGGLNDVLVPVEAFHRHHIFEKVNEHDERFKFERVPAVVELCWQAGANT 168
              +  +HEW    + DV+VP+EA+H      K   HDERF   RVPAVVELC Q G   
Sbjct: 186 TSQRKGLHEWTNSVIEDVIVPLEAYHLFDRLGKRIRHDERFSIPRVPAVVELCIQGGVEI 245

Query: 169 NDENLSSSTWNSVGGGGGGGSGRDE--------------------------PLSGNEMRL 228
            +          +  G       DE                          P S  E   
Sbjct: 246 PEFPAKRRRKPIIRIGKSEFVDADETELPDPEPQPPPVPLLTELPVSEITPPSSEEETVS 305

Query: 229 LATETLRAWETVRTGVQKLLMVYPAKICNYCSDVHVGPSVHKARPCGVFKCESWRGSHFW 288
           LA ETL+AWE +R G +KL+ +Y  ++C YC +VHVGP+ HKA+ CG FK +   G H W
Sbjct: 306 LAEETLQAWEEMRAGAKKLMRMYRVRVCGYCPEVHVGPTGHKAQNCGAFKHQQRNGQHGW 365

Query: 289 EKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGHSPAVLALCTHAGAIAPPKYHCMMKV 327
           + A +DDL+PP+ VWH    + P +  E R +YG +PAV+ +C  AGA+ P  Y   M++
Sbjct: 366 QSAVLDDLIPPRYVWHVPDVNGPPMQRELRSFYGQAPAVVEICAQAGAVVPEHYRATMRL 425

[Close]
BLAST of CmaCh20G006320 vs. Swiss-Prot
Match: APO1_ARATH (APO protein 1, chloroplastic OS=Arabidopsis thaliana GN=APO1 PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.4e-51
Identity = 119/328 (36.28%), Postives = 168/328 (51.22%), Query Frame = 1 

Query: 34  KKLRPM-ILKRIQNRANNCPIKGLIPVAQQVFEARAILIHGVSTLLKEFPVVSCKFCPEV 93
           KKL  M I K++    N   +  L+PVA QV +   +LI G++ LL   PV +C  C  V
Sbjct: 103 KKLAQMGIEKQLDPPKNGLLVPNLVPVADQVIDNWKLLIKGLAQLLHVVPVFACSECGAV 162

Query: 94  YVGEKGHLIRSCGGYKRGPKNQVHEWIRGGLNDVLVPVEAFHRHHIFEKVNEHDERFKFE 153
           +V   GH IR C G     +   H W++G +NDVL+PVE++H +  F +  +H+ RF++E
Sbjct: 163 HVANVGHNIRDCNGPTNSQRRGSHSWVKGTINDVLIPVESYHMYDPFGRRIKHETRFEYE 222

Query: 154 RVPAVVELCWQAGANTNDENLSSSTW------NSVGGGGG-------------------- 213
           R+PA+VELC QAG    +      T         V   GG                    
Sbjct: 223 RIPALVELCIQAGVEIPEYPCRRRTQPIRMMGKRVIDRGGYHKEPEKPQTSSSLSSPLAE 282

Query: 214 ----GGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPAKICNYCSDVHVGPSV 273
               G   R  P +  ++  +A ET+ A+E VR GV KL+  +  K C YCS+VHVGP  
Sbjct: 283 LDTLGVFERYPPPTPEDIPKIAQETMDAYEKVRLGVTKLMRKFTVKACGYCSEVHVGPWG 342

Query: 274 HKARPCGVFKCESWR-GSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGHSPAV 330
           H  + CG FK   WR G H W+ A VD++ PP  VWH R      L    R +YG +PA+
Sbjct: 343 HSVKLCGEFK-HQWRDGKHGWQDALVDEVFPPNYVWHVRDLKGNPLTGNLRRFYGKAPAL 402

[Close]
BLAST of CmaCh20G006320 vs. Swiss-Prot
Match: APO3_ARATH (APO protein 3, mitochondrial OS=Arabidopsis thaliana GN=APO3 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.3e-22
Identity = 50/130 (38.46%), Postives = 76/130 (58.46%), Query Frame = 1 

Query: 200 MRLLATETLRAWETVRTGVQKLLMVYPAKICNYCSDVHVGPSVHKARPCGVFKCESWRGS 259
           ++ L+ ET+ +W  +  GV+KL+  Y    C YC ++ VGP  HK R C   K +   G 
Sbjct: 265 LKELSFETMESWFEMVLGVRKLMERYRVWTCGYCPEIQVGPKGHKVRMCKATKHQMRDGM 324

Query: 260 HFWEKADVDDLVPPKIVWH-RRPQDPPVLVDEGRDYYGHSPAVLALCTHAGAIAPPKYHC 319
           H W++A +DD+V P  VWH R P D  VL +  + +YG +PAV+ +C   GA  P +Y+ 
Sbjct: 325 HAWQEATIDDVVGPTYVWHVRDPTDGSVLDNSLKRFYGKAPAVIEMCVQGGAPVPDQYNS 384

Query: 320 MMKVQGLPPQ 329
           MM++  + PQ
Sbjct: 385 MMRLDVVYPQ 394

[Close]
BLAST of CmaCh20G006320 vs. TrEMBL
Match: A0A0A0LQG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G421010 PE=4 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 3.5e-155
Identity = 265/333 (79.58%), Postives = 294/333 (88.29%), Query Frame = 1 

Query: 1   MKTMPFMALRRKFCENIVQEFMLHRCYSSKVDLKKLRPMILKRIQNRANNCPIKGLIPVA 60
           MKTM FMA+RRKF +N+VQEFML RCYSSKV+LKKLRPMILKRIQ+RA N PIKG+ PVA
Sbjct: 1   MKTMAFMAIRRKFRDNVVQEFMLQRCYSSKVNLKKLRPMILKRIQDRAKNYPIKGMTPVA 60

Query: 61  QQVFEARAILIHGVSTLLKEFPVVSCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWIR 120
           QQV EARA+LIHGVSTLLK FPV+SCKFCPEVYVGE+GHLIRSCGGYKRG KNQVH+WIR
Sbjct: 61  QQVLEARAMLIHGVSTLLKSFPVLSCKFCPEVYVGEEGHLIRSCGGYKRGAKNQVHQWIR 120

Query: 121 GGLNDVLVPVEAFHRHHIFEKVNEHDERFKFERVPAVVELCWQAGANTNDENLSSSTWNS 180
           G L D++VPVEAFH HH+F+ V +HDERF FERVPAVVELC QAGAN +D+NL+SST NS
Sbjct: 121 GDLKDIIVPVEAFHLHHMFQDVIKHDERFNFERVPAVVELCSQAGANPDDKNLASSTQNS 180

Query: 181 VGGGGGGGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPAKICNYCSDVHVGP 240
                GGGSG DEPLS +EM LLATET+RAWET+RTGVQKLLMVYP K+C YCS+VHVGP
Sbjct: 181 ---AEGGGSGMDEPLSDHEMMLLATETIRAWETLRTGVQKLLMVYPTKVCKYCSEVHVGP 240

Query: 241 SVHKARPCGVFKCESWRGSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGHSPA 300
           S HKAR CGVF  ESWRGSHFWEKADVDDLVPPKIVWHRR QDPPVLVD+G+DYYGH+PA
Sbjct: 241 SGHKARLCGVFTYESWRGSHFWEKADVDDLVPPKIVWHRRQQDPPVLVDKGKDYYGHAPA 300

Query: 301 VLALCTHAGAIAPPKYHCMMKVQGLPPQSHLKL 334
           V+ALCT AG IAP KYHCMMKVQGL P+  L+L
Sbjct: 301 VVALCTQAGVIAPFKYHCMMKVQGLSPRVKLEL 330

[Close]
BLAST of CmaCh20G006320 vs. TrEMBL
Match: A0A061EHU0_THECC (APO protein 4 isoform 1 OS=Theobroma cacao GN=TCM_019219 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 1.1e-121
Identity = 210/302 (69.54%), Postives = 250/302 (82.78%), Query Frame = 1 

Query: 25  RCYSSKVDLKKLRPMILKRIQNRANNCPIKGLIPVAQQVFEARAILIHGVSTLLKEFPVV 84
           R YSSKVDLKKLRPMILKRI+NRA + P+ G+IPVAQ+V  ARA+L  GVS LLK FPV+
Sbjct: 10  RSYSSKVDLKKLRPMILKRIENRAKDYPVPGMIPVAQEVLMARALLFQGVSILLKLFPVL 69

Query: 85  SCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWIRGGLNDVLVPVEAFHRHHIFEKVNE 144
           +CKFCPEVY+GEKGHLI++C GYKR  KN+VHEW+ GGLND+LVPVEAFH H++F+ V +
Sbjct: 70  ACKFCPEVYIGEKGHLIKTCCGYKRIGKNRVHEWVNGGLNDILVPVEAFHLHNMFQGVIK 129

Query: 145 HDERFKFERVPAVVELCWQAGANTNDENLSSSTWNSVGGGGGGGSGRDEPLSGNEMRLLA 204
           H +RF FERVPAVVELCWQAGA+ NDENL+S   + V     GG    E LS +++ ++A
Sbjct: 130 HQQRFDFERVPAVVELCWQAGADLNDENLNSG--SLVADEFYGGVRGIESLSHDDLTVIA 189

Query: 205 TETLRAWETVRTGVQKLLMVYPAKICNYCSDVHVGPSVHKARPCGVFKCESWRGSHFWEK 264
             TLRAWET+R+GV KLL+VYPAK+C YCS+VHVGPS H+AR CGVF+ ESWRG+HFW+K
Sbjct: 190 NGTLRAWETLRSGVMKLLLVYPAKVCKYCSEVHVGPSGHRARLCGVFRYESWRGAHFWKK 249

Query: 265 ADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGHSPAVLALCTHAGAIAPPKYHCMMKVQG 324
           A VDDLVPPKIVW RRPQDP VL+DEGRDYYGH+PAV+ LC+ AGAI P KY CMMKV G
Sbjct: 250 AGVDDLVPPKIVWRRRPQDPLVLLDEGRDYYGHAPAVVDLCSGAGAIVPTKYSCMMKVSG 309

Query: 325 LP 327
           LP
Sbjct: 310 LP 309

[Close]
BLAST of CmaCh20G006320 vs. TrEMBL
Match: F6HIK2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g02380 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 1.6e-120
Identity = 213/330 (64.55%), Postives = 259/330 (78.48%), Query Frame = 1 

Query: 7   MALRRKFCENIVQEF----MLHRCYSSKVDLKKLRPMILKRIQNRANNCPIKGLIPVAQQ 66
           MALR K     + E     M  R YS KVDLKKLRPMILKRI+NRA   PI  +IPVAQ 
Sbjct: 1   MALRGKLWHCFLDEASGFAMYARFYSVKVDLKKLRPMILKRIENRAKEYPISSMIPVAQD 60

Query: 67  VFEARAILIHGVSTLLKEFPVVSCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWIRGG 126
           V +AR++LI GVSTL+  FPV++CKFCPEVY+GE+GHLI++C GYKR  KNQVHEWI G 
Sbjct: 61  VLKARSLLIQGVSTLMNVFPVMACKFCPEVYIGEQGHLIQTCYGYKRRSKNQVHEWISGS 120

Query: 127 LNDVLVPVEAFHRHHIFEKVNEHDERFKFERVPAVVELCWQAGANTNDENLSSSTWNSVG 186
           LND+LVPVE FH   +F+ V +H +RF F+RVPAV ELC QAGA+ ++ENLSSS+W S  
Sbjct: 121 LNDILVPVETFHLQKMFQDVIKHHQRFDFDRVPAVFELCLQAGADLDEENLSSSSWKSES 180

Query: 187 GGGGGGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPAKICNYCSDVHVGPSV 246
              G    +   LS +E++ +AT TLRAWE +R+G+++LL+VYPAK+C YCS+VHVGPS 
Sbjct: 181 TFSGVHGTKS--LSPDELKFVATGTLRAWEVLRSGIRRLLLVYPAKVCKYCSEVHVGPSG 240

Query: 247 HKARPCGVFKCESWRGSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGHSPAVL 306
           HKAR CGVFK ESWRG+HFW+KADVDDLVPPKIVW +RPQDPPVLV+EGRD+YGH+PAV+
Sbjct: 241 HKARLCGVFKYESWRGAHFWKKADVDDLVPPKIVWRQRPQDPPVLVNEGRDFYGHAPAVV 300

Query: 307 ALCTHAGAIAPPKYHCMMKVQGLPPQSHLK 333
            LCT AGAIAP +YH MMKVQGLP  + +K
Sbjct: 301 DLCTKAGAIAPARYHSMMKVQGLPGPTGVK 328

[Close]
BLAST of CmaCh20G006320 vs. TrEMBL
Match: U5FMZ8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s06490g PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 2.0e-118
Identity = 208/324 (64.20%), Postives = 254/324 (78.40%), Query Frame = 1 

Query: 7   MALRRKFCENIVQEF-----MLHRCYSSKVDLKKLRPMILKRIQNRANNCPIKGLIPVAQ 66
           MALR+K  ENIV+EF     M  R YSS+VD KKLRPMILKRIQNRA + P+KG++PVA+
Sbjct: 1   MALRKKLWENIVEEFSKTYFMHSRFYSSRVDFKKLRPMILKRIQNRAKDYPVKGMVPVAR 60

Query: 67  QVFEARAILIHGVSTLLKEFPVVSCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWIRG 126
           +V E R +LI GVSTL++ FPV++CKFCPEVY+GEKGHLI++C GYKR  + +VHEWI G
Sbjct: 61  EVLEKRKLLIQGVSTLMEVFPVLACKFCPEVYIGEKGHLIQTCYGYKRCGRKRVHEWIPG 120

Query: 127 GLNDVLVPVEAFHRHHIFEKVNEHDERFKFERVPAVVELCWQAGANTNDENLSSSTWNSV 186
           GLND+LVPVE F   ++F+ V EHD+RF F+RVPAVVELC QAGAN +DENL     +  
Sbjct: 121 GLNDILVPVETFRLDNMFQDVIEHDQRFDFDRVPAVVELCRQAGANIDDENLHPGMLDLD 180

Query: 187 GGGGGGGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPAKICNYCSDVHVGPS 246
           GG G    G  EP S + +  +A E L AWE +R+GVQ+LL+VYP+K+C +CS+VH+GPS
Sbjct: 181 GGIGHIDGG--EPFSPSHLMYIAKEILDAWEKLRSGVQRLLLVYPSKVCKHCSEVHIGPS 240

Query: 247 VHKARPCGVFKCESWRGSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGHSPAV 306
            HKAR CGVFK ESW G HFW+KA+VDDLVPPKIVW RRPQDP VLV+EGRD+YGH+PAV
Sbjct: 241 GHKARLCGVFKFESWHGKHFWKKAEVDDLVPPKIVWRRRPQDPLVLVNEGRDFYGHAPAV 300

Query: 307 LALCTHAGAIAPPKYHCMMKVQGL 326
           + LCT  G I P KY CMMK+QGL
Sbjct: 301 VDLCTKTGIIVPTKYSCMMKIQGL 322

[Close]
BLAST of CmaCh20G006320 vs. TrEMBL
Match: A0A151R7A7_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_040522 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 3.8e-117
Identity = 192/301 (63.79%), Postives = 248/301 (82.39%), Query Frame = 1 

Query: 25  RCYSSKVDLKKLRPMILKRIQNRANNCPIKGLIPVAQQVFEARAILIHGVSTLLKEFPVV 84
           R Y++KVDL+KLRPMILKRI+ RA   P++ ++P+A++V +AR +LIHGVSTLLK  P++
Sbjct: 14  RLYATKVDLRKLRPMILKRIEKRAQAYPVRAMVPIAKEVLQARNVLIHGVSTLLKFLPLM 73

Query: 85  SCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWIRGGLNDVLVPVEAFHRHHIFEKVNE 144
           +CKFCPE+Y+GE+GHLI++C GYK   KN+VHEW++GGLNDVLVPVE+FH +++++ V  
Sbjct: 74  ACKFCPEIYIGEQGHLIQTCWGYKHRAKNRVHEWVKGGLNDVLVPVESFHLNNMYQNVIR 133

Query: 145 HDERFKFERVPAVVELCWQAGANTNDENLSSSTWNSVGGGGGGGSGRDEPLSGNEMRLLA 204
           H+ERF F+R+PAVVELCWQAGA+ +DENL+S  WN     G G     E LS N++  +A
Sbjct: 134 HNERFDFDRIPAVVELCWQAGADAHDENLNSGNWNL--DTGNGSILETESLSPNDLVSIA 193

Query: 205 TETLRAWETVRTGVQKLLMVYPAKICNYCSDVHVGPSVHKARPCGVFKCESWRGSHFWEK 264
            +TL AWET+R+GV+KLL+VYP K+C YCS+VHVGPS HKAR CGVFK ESW+G+HFW K
Sbjct: 194 NKTLTAWETLRSGVEKLLLVYPVKVCKYCSEVHVGPSGHKARLCGVFKYESWKGAHFWIK 253

Query: 265 ADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGHSPAVLALCTHAGAIAPPKYHCMMKVQG 324
           A+VD+LVPPK+VW RRP DPPVLV+EG+D+YG  PAVL LC+ AGAI P KY+CMMKVQG
Sbjct: 254 ANVDNLVPPKVVWRRRPHDPPVLVNEGKDFYGRVPAVLDLCSKAGAIVPAKYNCMMKVQG 312

Query: 325 L 326
           L
Sbjct: 314 L 312

[Close]
BLAST of CmaCh20G006320 vs. TAIR10
Match: AT3G21740.1 (AT3G21740.1 Arabidopsis thaliana protein of unknown function (DUF794))

HSP 1 Score: 356.7 bits (914), Expect = 1.6e-98
Identity = 164/294 (55.78%), Postives = 216/294 (73.47%), Query Frame = 1 

Query: 32  DLKKLRPMILKRIQNRANNCPIKGLIPVAQQVFEARAILIHGVSTLLKEFPVVSCKFCPE 91
           DL+KLRPMILKRI+NRA + P+K ++PVA+++  AR  LI  ++ LLK FPV++CKFC E
Sbjct: 34  DLRKLRPMILKRIENRAKDYPVKEIVPVAEEILIARKNLISNIAALLKVFPVLTCKFCSE 93

Query: 92  VYVGEKGHLIRSCGGYKRGPKNQVHEWIRGGLNDVLVPVEAFHRHHIFEKVNEHDERFKF 151
           V+VG++GHLI +C  Y R   N++HEW+ G +ND+LVPVE++H H+I + V  H ERF +
Sbjct: 94  VFVGKEGHLIETCRSYIRRGNNRLHEWVPGSINDILVPVESYHLHNISQGVIRHQERFDY 153

Query: 152 ERVPAVVELCWQAGANTNDENLSSSTWNSVGGGGGGGSGRDEPLSGNEMRLLATETLRAW 211
           +RVPA++ELC QAGA   +E L    ++ +             L   +++ +    L AW
Sbjct: 154 DRVPAILELCCQAGAIHPEEILQ---YSEIHDNPQISEEDIRSLPAGDLKYVGANALMAW 213

Query: 212 ETVRTGVQKLLMVYPAKICNYCSDVHVGPSVHKARPCGVFKCESWRGSHFWEKADVDDLV 271
           E VR GV+KLL+VYP+K+C  C +VHVGPS HKAR CGVFK ESWRG+H+WEKA V+DLV
Sbjct: 214 EKVRAGVKKLLLVYPSKVCKRCKEVHVGPSGHKARLCGVFKYESWRGTHYWEKAGVNDLV 273

Query: 272 PPKIVWHRRPQDPPVLVDEGRDYYGHSPAVLALCTHAGAIAPPKYHCMMKVQGL 326
           P K+VWHRRPQDP VLVDEGR YYGH+PA+++LC+H GAI P KY C MK QGL
Sbjct: 274 PEKMVWHRRPQDPVVLVDEGRSYYGHAPAIVSLCSHTGAIVPVKYACKMKPQGL 324

[Close]
BLAST of CmaCh20G006320 vs. TAIR10
Match: AT5G57930.2 (AT5G57930.2 Arabidopsis thaliana protein of unknown function (DUF794))

HSP 1 Score: 214.9 bits (546), Expect = 7.4e-56
Identity = 113/305 (37.05%), Postives = 160/305 (52.46%), Query Frame = 1 

Query: 49  NNCPIKGLIPVAQQVFEARAILIHGVSTLLKEFPVVSCKFCPEVYVGEKGHLIRSCGGYK 108
           N   +K L+P+A +V+ AR  LI+ +  L+K   V +C +C E++VG  GH  +SC G  
Sbjct: 129 NGMVVKSLVPLAYKVYNARIRLINNLHRLMKVVRVNACGWCNEIHVGPYGHPFKSCKGPN 188

Query: 109 RGPKNQVHEWIRGGLNDVLVPVEAFHRHHIFEKVNEHDERFKFERVPAVVELCWQAGANT 168
              +  +HEW    + DV+VP+EA+H      K   HDERF   RVPAVVELC Q G   
Sbjct: 189 TSQRKGLHEWTNSVIEDVIVPLEAYHLFDRLGKRIRHDERFSIPRVPAVVELCIQGGVEI 248

Query: 169 NDENLSSSTWNSVGGGGGGGSGRDE--------------------------PLSGNEMRL 228
            +          +  G       DE                          P S  E   
Sbjct: 249 PEFPAKRRRKPIIRIGKSEFVDADETELPDPEPQPPPVPLLTELPVSEITPPSSEEETVS 308

Query: 229 LATETLRAWETVRTGVQKLLMVYPAKICNYCSDVHVGPSVHKARPCGVFKCESWRGSHFW 288
           LA ETL+AWE +R G +KL+ +Y  ++C YC +VHVGP+ HKA+ CG FK +   G H W
Sbjct: 309 LAEETLQAWEEMRAGAKKLMRMYRVRVCGYCPEVHVGPTGHKAQNCGAFKHQQRNGQHGW 368

Query: 289 EKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGHSPAVLALCTHAGAIAPPKYHCMMKV 327
           + A +DDL+PP+ VWH    + P +  E R +YG +PAV+ +C  AGA+ P  Y   M++
Sbjct: 369 QSAVLDDLIPPRYVWHVPDVNGPPMQRELRSFYGQAPAVVEICAQAGAVVPEHYRATMRL 428

[Close]
BLAST of CmaCh20G006320 vs. TAIR10
Match: AT1G64810.2 (AT1G64810.2 Arabidopsis thaliana protein of unknown function (DUF794))

HSP 1 Score: 204.9 bits (520), Expect = 7.6e-53
Identity = 119/328 (36.28%), Postives = 168/328 (51.22%), Query Frame = 1 

Query: 34  KKLRPM-ILKRIQNRANNCPIKGLIPVAQQVFEARAILIHGVSTLLKEFPVVSCKFCPEV 93
           KKL  M I K++    N   +  L+PVA QV +   +LI G++ LL   PV +C  C  V
Sbjct: 127 KKLAQMGIEKQLDPPKNGLLVPNLVPVADQVIDNWKLLIKGLAQLLHVVPVFACSECGAV 186

Query: 94  YVGEKGHLIRSCGGYKRGPKNQVHEWIRGGLNDVLVPVEAFHRHHIFEKVNEHDERFKFE 153
           +V   GH IR C G     +   H W++G +NDVL+PVE++H +  F +  +H+ RF++E
Sbjct: 187 HVANVGHNIRDCNGPTNSQRRGSHSWVKGTINDVLIPVESYHMYDPFGRRIKHETRFEYE 246

Query: 154 RVPAVVELCWQAGANTNDENLSSSTW------NSVGGGGG-------------------- 213
           R+PA+VELC QAG    +      T         V   GG                    
Sbjct: 247 RIPALVELCIQAGVEIPEYPCRRRTQPIRMMGKRVIDRGGYHKEPEKPQTSSSLSSPLAE 306

Query: 214 ----GGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPAKICNYCSDVHVGPSV 273
               G   R  P +  ++  +A ET+ A+E VR GV KL+  +  K C YCS+VHVGP  
Sbjct: 307 LDTLGVFERYPPPTPEDIPKIAQETMDAYEKVRLGVTKLMRKFTVKACGYCSEVHVGPWG 366

Query: 274 HKARPCGVFKCESWR-GSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGHSPAV 330
           H  + CG FK   WR G H W+ A VD++ PP  VWH R      L    R +YG +PA+
Sbjct: 367 HSVKLCGEFK-HQWRDGKHGWQDALVDEVFPPNYVWHVRDLKGNPLTGNLRRFYGKAPAL 426

[Close]
BLAST of CmaCh20G006320 vs. TAIR10
Match: AT5G61930.1 (AT5G61930.1 Arabidopsis thaliana protein of unknown function (DUF794))

HSP 1 Score: 108.6 bits (270), Expect = 7.5e-24
Identity = 50/130 (38.46%), Postives = 76/130 (58.46%), Query Frame = 1 

Query: 200 MRLLATETLRAWETVRTGVQKLLMVYPAKICNYCSDVHVGPSVHKARPCGVFKCESWRGS 259
           ++ L+ ET+ +W  +  GV+KL+  Y    C YC ++ VGP  HK R C   K +   G 
Sbjct: 265 LKELSFETMESWFEMVLGVRKLMERYRVWTCGYCPEIQVGPKGHKVRMCKATKHQMRDGM 324

Query: 260 HFWEKADVDDLVPPKIVWH-RRPQDPPVLVDEGRDYYGHSPAVLALCTHAGAIAPPKYHC 319
           H W++A +DD+V P  VWH R P D  VL +  + +YG +PAV+ +C   GA  P +Y+ 
Sbjct: 325 HAWQEATIDDVVGPTYVWHVRDPTDGSVLDNSLKRFYGKAPAVIEMCVQGGAPVPDQYNS 384

Query: 320 MMKVQGLPPQ 329
           MM++  + PQ
Sbjct: 385 MMRLDVVYPQ 394

[Close]
BLAST of CmaCh20G006320 vs. NCBI nr
Match: gi|449468339|ref|XP_004151879.1| (PREDICTED: APO protein 4, mitochondrial [Cucumis sativus])

HSP 1 Score: 555.8 bits (1431), Expect = 5.0e-155
Identity = 265/333 (79.58%), Postives = 294/333 (88.29%), Query Frame = 1 

Query: 1   MKTMPFMALRRKFCENIVQEFMLHRCYSSKVDLKKLRPMILKRIQNRANNCPIKGLIPVA 60
           MKTM FMA+RRKF +N+VQEFML RCYSSKV+LKKLRPMILKRIQ+RA N PIKG+ PVA
Sbjct: 1   MKTMAFMAIRRKFRDNVVQEFMLQRCYSSKVNLKKLRPMILKRIQDRAKNYPIKGMTPVA 60

Query: 61  QQVFEARAILIHGVSTLLKEFPVVSCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWIR 120
           QQV EARA+LIHGVSTLLK FPV+SCKFCPEVYVGE+GHLIRSCGGYKRG KNQVH+WIR
Sbjct: 61  QQVLEARAMLIHGVSTLLKSFPVLSCKFCPEVYVGEEGHLIRSCGGYKRGAKNQVHQWIR 120

Query: 121 GGLNDVLVPVEAFHRHHIFEKVNEHDERFKFERVPAVVELCWQAGANTNDENLSSSTWNS 180
           G L D++VPVEAFH HH+F+ V +HDERF FERVPAVVELC QAGAN +D+NL+SST NS
Sbjct: 121 GDLKDIIVPVEAFHLHHMFQDVIKHDERFNFERVPAVVELCSQAGANPDDKNLASSTQNS 180

Query: 181 VGGGGGGGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPAKICNYCSDVHVGP 240
                GGGSG DEPLS +EM LLATET+RAWET+RTGVQKLLMVYP K+C YCS+VHVGP
Sbjct: 181 ---AEGGGSGMDEPLSDHEMMLLATETIRAWETLRTGVQKLLMVYPTKVCKYCSEVHVGP 240

Query: 241 SVHKARPCGVFKCESWRGSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGHSPA 300
           S HKAR CGVF  ESWRGSHFWEKADVDDLVPPKIVWHRR QDPPVLVD+G+DYYGH+PA
Sbjct: 241 SGHKARLCGVFTYESWRGSHFWEKADVDDLVPPKIVWHRRQQDPPVLVDKGKDYYGHAPA 300

Query: 301 VLALCTHAGAIAPPKYHCMMKVQGLPPQSHLKL 334
           V+ALCT AG IAP KYHCMMKVQGL P+  L+L
Sbjct: 301 VVALCTQAGVIAPFKYHCMMKVQGLSPRVKLEL 330

[Close]
BLAST of CmaCh20G006320 vs. NCBI nr
Match: gi|659111656|ref|XP_008455841.1| (PREDICTED: APO protein 4, mitochondrial [Cucumis melo])

HSP 1 Score: 549.7 bits (1415), Expect = 3.6e-153
Identity = 261/331 (78.85%), Postives = 292/331 (88.22%), Query Frame = 1 

Query: 1   MKTMPFMALRRKFCENIVQEFMLHRCYSSKVDLKKLRPMILKRIQNRANNCPIKGLIPVA 60
           MKTM FMA+RRKF +N+VQEFML RCYSSKV+LKKLRPMILKRIQ+RA + PIKG+ PVA
Sbjct: 1   MKTMAFMAIRRKFRDNVVQEFMLQRCYSSKVNLKKLRPMILKRIQDRAKSYPIKGMTPVA 60

Query: 61  QQVFEARAILIHGVSTLLKEFPVVSCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWIR 120
           QQV EARA+LIHGVSTLLK FPV+SCK+CPEVYVG +GHLIRSCGGYKRG KNQVH+WIR
Sbjct: 61  QQVLEARAMLIHGVSTLLKSFPVLSCKYCPEVYVGAEGHLIRSCGGYKRGAKNQVHQWIR 120

Query: 121 GGLNDVLVPVEAFHRHHIFEKVNEHDERFKFERVPAVVELCWQAGANTNDENLSSSTWNS 180
           G LND++VPVEAFH HH+F+ V +HDERF FERVPAVVELC QAG N +D++L+SST NS
Sbjct: 121 GDLNDIIVPVEAFHLHHMFQDVIKHDERFNFERVPAVVELCCQAGVNPDDKDLASSTQNS 180

Query: 181 VGGGGGGGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPAKICNYCSDVHVGP 240
                GGGSG DEP S +EM LLATET+RAWET+RTGVQKLLMVYP K+C YCS+VHVGP
Sbjct: 181 ---AEGGGSGMDEPFSDHEMMLLATETIRAWETLRTGVQKLLMVYPTKVCKYCSEVHVGP 240

Query: 241 SVHKARPCGVFKCESWRGSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGHSPA 300
           S HKAR CGVFK ESWRGSHFWEKADVDDLVPPKIVWHRR QDPPVLVD+GRDYYGH+PA
Sbjct: 241 SGHKARLCGVFKYESWRGSHFWEKADVDDLVPPKIVWHRRQQDPPVLVDKGRDYYGHAPA 300

Query: 301 VLALCTHAGAIAPPKYHCMMKVQGLPPQSHL 332
           V+ALC  AGAIAP KYHCMMKVQGL P+ +L
Sbjct: 301 VVALCMQAGAIAPFKYHCMMKVQGLSPRVNL 328

[Close]
BLAST of CmaCh20G006320 vs. NCBI nr
Match: gi|590652086|ref|XP_007033060.1| (APO protein 4 isoform 1 [Theobroma cacao])

HSP 1 Score: 444.5 bits (1142), Expect = 1.6e-121
Identity = 210/302 (69.54%), Postives = 250/302 (82.78%), Query Frame = 1 

Query: 25  RCYSSKVDLKKLRPMILKRIQNRANNCPIKGLIPVAQQVFEARAILIHGVSTLLKEFPVV 84
           R YSSKVDLKKLRPMILKRI+NRA + P+ G+IPVAQ+V  ARA+L  GVS LLK FPV+
Sbjct: 10  RSYSSKVDLKKLRPMILKRIENRAKDYPVPGMIPVAQEVLMARALLFQGVSILLKLFPVL 69

Query: 85  SCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWIRGGLNDVLVPVEAFHRHHIFEKVNE 144
           +CKFCPEVY+GEKGHLI++C GYKR  KN+VHEW+ GGLND+LVPVEAFH H++F+ V +
Sbjct: 70  ACKFCPEVYIGEKGHLIKTCCGYKRIGKNRVHEWVNGGLNDILVPVEAFHLHNMFQGVIK 129

Query: 145 HDERFKFERVPAVVELCWQAGANTNDENLSSSTWNSVGGGGGGGSGRDEPLSGNEMRLLA 204
           H +RF FERVPAVVELCWQAGA+ NDENL+S   + V     GG    E LS +++ ++A
Sbjct: 130 HQQRFDFERVPAVVELCWQAGADLNDENLNSG--SLVADEFYGGVRGIESLSHDDLTVIA 189

Query: 205 TETLRAWETVRTGVQKLLMVYPAKICNYCSDVHVGPSVHKARPCGVFKCESWRGSHFWEK 264
             TLRAWET+R+GV KLL+VYPAK+C YCS+VHVGPS H+AR CGVF+ ESWRG+HFW+K
Sbjct: 190 NGTLRAWETLRSGVMKLLLVYPAKVCKYCSEVHVGPSGHRARLCGVFRYESWRGAHFWKK 249

Query: 265 ADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGHSPAVLALCTHAGAIAPPKYHCMMKVQG 324
           A VDDLVPPKIVW RRPQDP VL+DEGRDYYGH+PAV+ LC+ AGAI P KY CMMKV G
Sbjct: 250 AGVDDLVPPKIVWRRRPQDPLVLLDEGRDYYGHAPAVVDLCSGAGAIVPTKYSCMMKVSG 309

Query: 325 LP 327
           LP
Sbjct: 310 LP 309

[Close]
BLAST of CmaCh20G006320 vs. NCBI nr
Match: gi|359485666|ref|XP_002273999.2| (PREDICTED: APO protein 4, mitochondrial [Vitis vinifera])

HSP 1 Score: 440.7 bits (1132), Expect = 2.3e-120
Identity = 213/330 (64.55%), Postives = 259/330 (78.48%), Query Frame = 1 

Query: 7   MALRRKFCENIVQEF----MLHRCYSSKVDLKKLRPMILKRIQNRANNCPIKGLIPVAQQ 66
           MALR K     + E     M  R YS KVDLKKLRPMILKRI+NRA   PI  +IPVAQ 
Sbjct: 1   MALRGKLWHCFLDEASGFAMYARFYSVKVDLKKLRPMILKRIENRAKEYPISSMIPVAQD 60

Query: 67  VFEARAILIHGVSTLLKEFPVVSCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWIRGG 126
           V +AR++LI GVSTL+  FPV++CKFCPEVY+GE+GHLI++C GYKR  KNQVHEWI G 
Sbjct: 61  VLKARSLLIQGVSTLMNVFPVMACKFCPEVYIGEQGHLIQTCYGYKRRSKNQVHEWISGS 120

Query: 127 LNDVLVPVEAFHRHHIFEKVNEHDERFKFERVPAVVELCWQAGANTNDENLSSSTWNSVG 186
           LND+LVPVE FH   +F+ V +H +RF F+RVPAV ELC QAGA+ ++ENLSSS+W S  
Sbjct: 121 LNDILVPVETFHLQKMFQDVIKHHQRFDFDRVPAVFELCLQAGADLDEENLSSSSWKSES 180

Query: 187 GGGGGGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPAKICNYCSDVHVGPSV 246
              G    +   LS +E++ +AT TLRAWE +R+G+++LL+VYPAK+C YCS+VHVGPS 
Sbjct: 181 TFSGVHGTKS--LSPDELKFVATGTLRAWEVLRSGIRRLLLVYPAKVCKYCSEVHVGPSG 240

Query: 247 HKARPCGVFKCESWRGSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGHSPAVL 306
           HKAR CGVFK ESWRG+HFW+KADVDDLVPPKIVW +RPQDPPVLV+EGRD+YGH+PAV+
Sbjct: 241 HKARLCGVFKYESWRGAHFWKKADVDDLVPPKIVWRQRPQDPPVLVNEGRDFYGHAPAVV 300

Query: 307 ALCTHAGAIAPPKYHCMMKVQGLPPQSHLK 333
            LCT AGAIAP +YH MMKVQGLP  + +K
Sbjct: 301 DLCTKAGAIAPARYHSMMKVQGLPGPTGVK 328

[Close]
BLAST of CmaCh20G006320 vs. NCBI nr
Match: gi|743883363|ref|XP_011037010.1| (PREDICTED: APO protein 4, mitochondrial [Populus euphratica])

HSP 1 Score: 434.9 bits (1117), Expect = 1.3e-118
Identity = 207/324 (63.89%), Postives = 254/324 (78.40%), Query Frame = 1 

Query: 7   MALRRKFCENIVQEF-----MLHRCYSSKVDLKKLRPMILKRIQNRANNCPIKGLIPVAQ 66
           MA  +K  EN+V+EF     M  R YSS+VD KKLRPMILKRIQNRA + P+KG++PVA+
Sbjct: 1   MAFTKKLWENLVEEFSKTYFMHSRFYSSRVDFKKLRPMILKRIQNRAKDYPVKGMVPVAR 60

Query: 67  QVFEARAILIHGVSTLLKEFPVVSCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWIRG 126
           +V E R +LI GVSTL++ FPV++CKFCPEVY+GEKGHLI++C GYKR  + +VHEWI G
Sbjct: 61  EVLEKRKLLIQGVSTLMEVFPVLACKFCPEVYIGEKGHLIQTCYGYKRCGRKRVHEWIPG 120

Query: 127 GLNDVLVPVEAFHRHHIFEKVNEHDERFKFERVPAVVELCWQAGANTNDENLSSSTWNSV 186
           GLND+LVPVE F  H++F+ V EH++RF F+RVPAVVELC QAGAN +DENL     +  
Sbjct: 121 GLNDILVPVETFRLHNMFQDVIEHNQRFDFDRVPAVVELCRQAGANIDDENLHPGMLDLD 180

Query: 187 GGGGGGGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPAKICNYCSDVHVGPS 246
           GG G    G  EP S + +   A E L AWE +R+GVQ+LL+VYP+K+C +CS+VH+GPS
Sbjct: 181 GGIGHIDGG--EPFSPSHLMHTAKEILDAWEKLRSGVQRLLLVYPSKVCKHCSEVHIGPS 240

Query: 247 VHKARPCGVFKCESWRGSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGHSPAV 306
            HKAR CGVFK ESW G HFW+KA+VDDLVPPKIVW RRPQDPPVLV+EGRD+YGH+PAV
Sbjct: 241 GHKARLCGVFKFESWHGKHFWKKAEVDDLVPPKIVWWRRPQDPPVLVNEGRDFYGHAPAV 300

Query: 307 LALCTHAGAIAPPKYHCMMKVQGL 326
           + LCT  G I PPKY CMMK+QGL
Sbjct: 301 VDLCTKTGIIVPPKYSCMMKIQGL 322

The following BLAST results are available for this feature:
BLAST of CmaCh20G006320 vs. Swiss-Prot
Match NameE-valueIdentityDescription
APO4_ARATH2.8e-9755.78APO protein 4, mitochondrial OS=Arabidopsis thaliana GN=APO4 PE=2 SV=2[more]
APO2_ARATH1.3e-5437.05APO protein 2, chloroplastic OS=Arabidopsis thaliana GN=APO2 PE=2 SV=1[more]
APO1_ARATH1.4e-5136.28APO protein 1, chloroplastic OS=Arabidopsis thaliana GN=APO1 PE=2 SV=1[more]
APO3_ARATH1.3e-2238.46APO protein 3, mitochondrial OS=Arabidopsis thaliana GN=APO3 PE=2 SV=1[more]
BLAST of CmaCh20G006320 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQG5_CUCSA3.5e-15579.58Uncharacterized protein OS=Cucumis sativus GN=Csa_2G421010 PE=4 SV=1[more]
A0A061EHU0_THECC1.1e-12169.54APO protein 4 isoform 1 OS=Theobroma cacao GN=TCM_019219 PE=4 SV=1[more]
F6HIK2_VITVI1.6e-12064.55Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g02380 PE=4 SV=... [more]
U5FMZ8_POPTR2.0e-11864.20Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s06490g PE=4 SV=1[more]
A0A151R7A7_CAJCA3.8e-11763.79Uncharacterized protein OS=Cajanus cajan GN=KK1_040522 PE=4 SV=1[more]
BLAST of CmaCh20G006320 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G21740.11.6e-9855.78 Arabidopsis thaliana protein of unknown function (DUF794)[more]
AT5G57930.27.4e-5637.05 Arabidopsis thaliana protein of unknown function (DUF794)[more]
AT1G64810.27.6e-5336.28 Arabidopsis thaliana protein of unknown function (DUF794)[more]
AT5G61930.17.5e-2438.46 Arabidopsis thaliana protein of unknown function (DUF794)[more]
BLAST of CmaCh20G006320 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449468339|ref|XP_004151879.1|5.0e-15579.58PREDICTED: APO protein 4, mitochondrial [Cucumis sativus][more]
gi|659111656|ref|XP_008455841.1|3.6e-15378.85PREDICTED: APO protein 4, mitochondrial [Cucumis melo][more]
gi|590652086|ref|XP_007033060.1|1.6e-12169.54APO protein 4 isoform 1 [Theobroma cacao][more]
gi|359485666|ref|XP_002273999.2|2.3e-12064.55PREDICTED: APO protein 4, mitochondrial [Vitis vinifera][more]
gi|743883363|ref|XP_011037010.1|1.3e-11863.89PREDICTED: APO protein 4, mitochondrial [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023342APO_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006979 response to oxidative stress
cellular_component GO:0005575 cellular_component
molecular_function GO:0003723 RNA binding
molecular_function GO:0020037 heme binding
molecular_function GO:0004601 peroxidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh20G006320.1CmaCh20G006320.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023342APO domainPFAMPF05634APO_RNA-bindcoord: 203..310
score: 6.1E-16coord: 29..168
score: 1.9
IPR023342APO domainPROFILEPS51499APOcoord: 85..170
score: 20.111coord: 229..314
score: 19
NoneNo IPR availablePANTHERPTHR10388EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1coord: 1..305
score: 9.4E
NoneNo IPR availablePANTHERPTHR10388:SF20APO PROTEIN 4, MITOCHONDRIALcoord: 1..305
score: 9.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh20G006320Cucsa.072830Cucumber (Gy14) v1cgycmaB0115
CmaCh20G006320Cla010496Watermelon (97103) v1cmawmB525
CmaCh20G006320Csa2G421010Cucumber (Chinese Long) v2cmacuB539
CmaCh20G006320MELO3C019241Melon (DHL92) v3.5.1cmameB502
CmaCh20G006320ClCG02G008480Watermelon (Charleston Gray)cmawcgB492
CmaCh20G006320CSPI02G26640Wild cucumber (PI 183967)cmacpiB545
CmaCh20G006320CmoCh02G001610Cucurbita moschata (Rifu)cmacmoB561
CmaCh20G006320Lsi10G001480Bottle gourd (USVL1VR-Ls)cmalsiB501
CmaCh20G006320Cp4.1LG16g04430Cucurbita pepo (Zucchini)cmacpeB562
CmaCh20G006320Cp4.1LG05g14410Cucurbita pepo (Zucchini)cmacpeB578
CmaCh20G006320MELO3C019241.2Melon (DHL92) v3.6.1cmamedB579
CmaCh20G006320CsaV3_2G035140Cucumber (Chinese Long) v3cmacucB0650
CmaCh20G006320Cla97C02G035080Watermelon (97103) v2cmawmbB580
CmaCh20G006320Bhi10G001136Wax gourdcmawgoB0685
CmaCh20G006320CsGy2G026110Cucumber (Gy14) v2cgybcmaB217
CmaCh20G006320Carg03143Silver-seed gourdcarcmaB0472
CmaCh20G006320Carg13537Silver-seed gourdcarcmaB0041
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh20G006320CmaCh02G001560Cucurbita maxima (Rimu)cmacmaB477
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh20G006320Melon (DHL92) v3.6.1cmamedB590
CmaCh20G006320Silver-seed gourdcarcmaB1215
CmaCh20G006320Cucumber (Chinese Long) v3cmacucB0684
CmaCh20G006320Watermelon (97103) v2cmawmbB582
CmaCh20G006320Watermelon (97103) v2cmawmbB592
CmaCh20G006320Wax gourdcmawgoB0681
CmaCh20G006320Cucurbita maxima (Rimu)cmacmaB157
CmaCh20G006320Cucurbita maxima (Rimu)cmacmaB443
CmaCh20G006320Cucumber (Gy14) v1cgycmaB0408
CmaCh20G006320Cucurbita moschata (Rifu)cmacmoB540
CmaCh20G006320Cucurbita moschata (Rifu)cmacmoB547
CmaCh20G006320Cucurbita moschata (Rifu)cmacmoB552
CmaCh20G006320Wild cucumber (PI 183967)cmacpiB576
CmaCh20G006320Cucumber (Chinese Long) v2cmacuB569
CmaCh20G006320Melon (DHL92) v3.5.1cmameB513
CmaCh20G006320Watermelon (Charleston Gray)cmawcgB494
CmaCh20G006320Watermelon (97103) v1cmawmB528
CmaCh20G006320Cucurbita pepo (Zucchini)cmacpeB559
CmaCh20G006320Cucurbita pepo (Zucchini)cmacpeB574
CmaCh20G006320Bottle gourd (USVL1VR-Ls)cmalsiB513
CmaCh20G006320Cucumber (Gy14) v2cgybcmaB953