CmaCh20G005830 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh20G005830
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	RAC-like GTP binding protein 5
Location	Cma_Chr20 : 2774540 .. 2775767 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAAGCAGAGCATTCTTGTAAGGAATCGTCTCCCCTTTCAATCTCGTCTCTCCTCCGGCAGCCTCATCCTCTCCCTCTCTCTCTCTCTCTCGCTCTCTCCCCCTCTCTCTCTTCCCTTGGAGACTGTCGGGATCTCTGTCTTTATCTATTTATTTATAAATCCAGATCCCATTTCCTAAAAATCGTCGCATAATTAAAATCTCCTCTGTTTTCGACAATTCTTGAAATGGGCGCTTACAGAGCCGATGATGATTACGATTACCTGTTCAAGGTGGTGCTGATCGGCGACTCCGGCGTCGGAAAATCCAATCTCTTGTCCCGTTTCACCCGAAACGAATTCAGCCTCGAGACCAAATCGACCATCGGTGTTGAATTCGCTACCCGTAGTATTCGCGTCGATGACAAGATCGTCAAGGCTCAGATTTGGGACACTGCCGGCCAAGAAAGGTTTTCCTAAACTTTTACTTTTTAAAAAATTATGAATTATAAATTTAGTCTCTAAACTTTTGGGTTACAATAGGTACCGAGCGATTACGAGCGCGTATTATAGGGGAGCGGTAGGAGCATTGATAGTGTACGACGTGACGCGGCACGTGACATTTGAGAATGTGGAGAGATGGCTGAAGGAGTTAAGAGGGCACACGGATCACAACATAGTGATAATGCTGGTAGGGAACAAAGCGGATTTGCGGCACCTGAGGGCAGTGTCGATGGAGGACGCGCAGGCATTTGCAGAGAGGGAGAGAACATATTTCATGGAGACATCAGCATTAGAGTCATTCAACGTCGAGAATTCCTTCACGGAGGTTCTCACGCAGACCTACAGAGTGGTGAGCAGGAAGATCCTTGACATTGGAGATGATCCCACAGTCCTGCCTAAGGGACAGACCATTGACATTGGCTCCAAGGATGATGTCTCTGCCGTTAAGAAGGCTGGCTGCTGTTCTTCATAACAATCTTCAAAATACTTAAAATCAATTCATTCCTCAAATGGGTCTCTCTTTAATTTTGGTTTTGTTTTGTTTTCTAAATTTTGTTTGGTTTTTTATTTTTTTTGTTGGGGAAATGTTAAATGATCATGTGTGTTCCTTGGAATGCATAATTTCTAGTGCTGTTTTTAGGTAGGCTGTACCTATGAATTTGATGGATGCTTAGAACAACAACAACAAAATGAATTATTGGGAGGGAAATTATTGGAGAACAAATGTACCAATACTTATAACGATT

mRNA sequence

CCAAAGCAGAGCATTCTTGTAAGGAATCGTCTCCCCTTTCAATCTCGTCTCTCCTCCGGCAGCCTCATCCTCTCCCTCTCTCTCTCTCTCTCGCTCTCTCCCCCTCTCTCTCTTCCCTTGGAGACTGTCGGGATCTCTGTCTTTATCTATTTATTTATAAATCCAGATCCCATTTCCTAAAAATCGTCGCATAATTAAAATCTCCTCTGTTTTCGACAATTCTTGAAATGGGCGCTTACAGAGCCGATGATGATTACGATTACCTGTTCAAGGTGGTGCTGATCGGCGACTCCGGCGTCGGAAAATCCAATCTCTTGTCCCGTTTCACCCGAAACGAATTCAGCCTCGAGACCAAATCGACCATCGGTGTTGAATTCGCTACCCGTAGTATTCGCGTCGATGACAAGATCGTCAAGGCTCAGATTTGGGACACTGCCGGCCAAGAAAGGTACCGAGCGATTACGAGCGCGTATTATAGGGGAGCGGTAGGAGCATTGATAGTGTACGACGTGACGCGGCACGTGACATTTGAGAATGTGGAGAGATGGCTGAAGGAGTTAAGAGGGCACACGGATCACAACATAGTGATAATGCTGGTAGGGAACAAAGCGGATTTGCGGCACCTGAGGGCAGTGTCGATGGAGGACGCGCAGGCATTTGCAGAGAGGGAGAGAACATATTTCATGGAGACATCAGCATTAGAGTCATTCAACGTCGAGAATTCCTTCACGGAGGTTCTCACGCAGACCTACAGAGTGGTGAGCAGGAAGATCCTTGACATTGGAGATGATCCCACAGTCCTGCCTAAGGGACAGACCATTGACATTGGCTCCAAGGATGATGTCTCTGCCGTTAAGAAGGCTGGCTGCTGTTCTTCATAACAATCTTCAAAATACTTAAAATCAATTCATTCCTCAAATGGGTCTCTCTTTAATTTTGGTTTTGTTTTGTTTTCTAAATTTTGTTTGGTTTTTTATTTTTTTTGTTGGGGAAATGTTAAATGATCATGTGTGTTCCTTGGAATGCATAATTTCTAGTGCTGTTTTTAGGTAGGCTGTACCTATGAATTTGATGGATGCTTAGAACAACAACAACAAAATGAATTATTGGGAGGGAAATTATTGGAGAACAAATGTACCAATACTTATAACGATT

Coding sequence (CDS)

ATGGGCGCTTACAGAGCCGATGATGATTACGATTACCTGTTCAAGGTGGTGCTGATCGGCGACTCCGGCGTCGGAAAATCCAATCTCTTGTCCCGTTTCACCCGAAACGAATTCAGCCTCGAGACCAAATCGACCATCGGTGTTGAATTCGCTACCCGTAGTATTCGCGTCGATGACAAGATCGTCAAGGCTCAGATTTGGGACACTGCCGGCCAAGAAAGGTACCGAGCGATTACGAGCGCGTATTATAGGGGAGCGGTAGGAGCATTGATAGTGTACGACGTGACGCGGCACGTGACATTTGAGAATGTGGAGAGATGGCTGAAGGAGTTAAGAGGGCACACGGATCACAACATAGTGATAATGCTGGTAGGGAACAAAGCGGATTTGCGGCACCTGAGGGCAGTGTCGATGGAGGACGCGCAGGCATTTGCAGAGAGGGAGAGAACATATTTCATGGAGACATCAGCATTAGAGTCATTCAACGTCGAGAATTCCTTCACGGAGGTTCTCACGCAGACCTACAGAGTGGTGAGCAGGAAGATCCTTGACATTGGAGATGATCCCACAGTCCTGCCTAAGGGACAGACCATTGACATTGGCTCCAAGGATGATGTCTCTGCCGTTAAGAAGGCTGGCTGCTGTTCTTCATAA

Protein sequence

MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIVIMLVGNKADLRHLRAVSMEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSRKILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS

Homology

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BLAST of CmaCh20G005830 vs. Swiss-Prot
Match: RAA1F_ARATH (Ras-related protein RABA1f OS=Arabidopsis thaliana GN=RABA1F PE=2 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 1.6e-106
Identity = 194/217 (89.40%), Postives = 204/217 (94.01%), Query Frame = 1


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           M AYRADD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLE+KSTIGVEFATRSI VDDK
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSMEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IM VGNKADLRHLRAVS EDA+AFAERE T+FMETSALES NVEN+FTEVL+Q YRVVSR
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           K LDIGDDP  LPKGQTI++GSKDDVSAVKK GCCS+
Sbjct: 181 KALDIGDDPAALPKGQTINVGSKDDVSAVKKVGCCSN 217

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BLAST of CmaCh20G005830 vs. Swiss-Prot
Match: RAA1G_ARATH (Ras-related protein RABA1g OS=Arabidopsis thaliana GN=RABA1G PE=2 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 2.2e-103
Identity = 188/217 (86.64%), Postives = 203/217 (93.55%), Query Frame = 1


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           M AYRADDDYD+L+KVVLIGDSGVGKSNLLSRFTRNEFSLE+KSTIGVEFATRSI VD+K
Sbjct: 1   MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HT+ NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120

Query: 121 IMLVGNKADLRHLRAVSMEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRAVS EDA+AFAERE T+FMETSALE+ NVEN+FTEVL+Q YRV S+
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           K LDIGDD T LPKGQ+I++GSKDDVS VKK GCCSS
Sbjct: 181 KALDIGDDHTTLPKGQSINVGSKDDVSEVKKVGCCSS 217

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BLAST of CmaCh20G005830 vs. Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 2.2e-103
Identity = 187/216 (86.57%), Postives = 203/216 (93.98%), Query Frame = 1


Query: 2   GAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDKI 61
           G YRA+DDYDYLFK+VLIGDSGVGKSNLLSRF+RNEF+LE+KSTIGVEFATRSIRVDDKI
Sbjct: 3   GGYRAEDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKI 62

Query: 62  VKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIVI 121
           VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+TRHVTFENVERWLKELR HTD NIVI
Sbjct: 63  VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVI 122

Query: 122 MLVGNKADLRHLRAVSMEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSRK 181
           MLVGNKADLRHLRAVS EDA+AFAERE T+FMETSALES NVEN+FTEVLT+ Y+VV RK
Sbjct: 123 MLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRK 182

Query: 182 ILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
            L++GDDP  LPKGQTI++G KDDVSAVKK GCCSS
Sbjct: 183 ALEVGDDPAALPKGQTINVG-KDDVSAVKKVGCCSS 217

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BLAST of CmaCh20G005830 vs. Swiss-Prot
Match: RAA1I_ARATH (Ras-related protein RABA1i OS=Arabidopsis thaliana GN=RABA1I PE=2 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 1.5e-99
Identity = 180/218 (82.57%), Postives = 202/218 (92.66%), Query Frame = 1


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRA+DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS ++++TIGVEFATRSI+ DDK
Sbjct: 1   MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSMEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRA+S E+A+AFAERE T+FMETSALE+ NV+N+FTEVLTQ YRVVS+
Sbjct: 121 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 180

Query: 181 KILDIGDDP-TVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           K L+ GDDP T LPKGQ I++G +DD+SAVKK GCCS+
Sbjct: 181 KALEAGDDPTTALPKGQMINVGGRDDISAVKKPGCCSA 218

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BLAST of CmaCh20G005830 vs. Swiss-Prot
Match: RAA1H_ARATH (Ras-related protein RABA1h OS=Arabidopsis thaliana GN=RABA1H PE=2 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 9.6e-99
Identity = 179/218 (82.11%), Postives = 200/218 (91.74%), Query Frame = 1


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MG Y+A+DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +++STIGVEFATRSI+VDDK
Sbjct: 1   MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD N V
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTV 120

Query: 121 IMLVGNKADLRHLRAVSMEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADL HLRA+S E+ + FAERE T+FMETSALE+ NVEN+FTEVLTQ YRVVS+
Sbjct: 121 IMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSK 180

Query: 181 KILDIGDDP-TVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           K LD GDDP T LPKGQ I++GS+DDVSAVKK+GCC++
Sbjct: 181 KALDAGDDPTTALPKGQMINVGSRDDVSAVKKSGCCAT 218

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BLAST of CmaCh20G005830 vs. TrEMBL
Match: A0A0A0LN26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G415550 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 1.8e-115
Identity = 215/217 (99.08%), Postives = 215/217 (99.08%), Query Frame = 1


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELR HTDHNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRSHTDHNIV 120

Query: 121 IMLVGNKADLRHLRAVSMEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRAVS EDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS
Sbjct: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 217

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BLAST of CmaCh20G005830 vs. TrEMBL
Match: G7IFI5_MEDTR (RAB GTPase-like protein A1D OS=Medicago truncatula GN=MTR_2g014990 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 4.3e-106
Identity = 194/217 (89.40%), Postives = 208/217 (95.85%), Query Frame = 1


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLE+KSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           +VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSMEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           +MLVGNKADLRHLRAVS ED+ AFAERE T+FMETSALES NVEN+FTEVLTQ YRVVS+
Sbjct: 121 VMLVGNKADLRHLRAVSTEDSTAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSK 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           K L+IGDDPT LPKGQTID+GS+DDVSAVKK+GCCS+
Sbjct: 181 KALEIGDDPTALPKGQTIDVGSRDDVSAVKKSGCCSA 217

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BLAST of CmaCh20G005830 vs. TrEMBL
Match: A0A061GFC3_THECC (RAB GTPase A1F OS=Theobroma cacao GN=TCM_029778 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 9.7e-106
Identity = 195/217 (89.86%), Postives = 206/217 (94.93%), Query Frame = 1


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLE+KSTIGVEFATRSI VDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           +VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSMEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRAV+ EDA++FAERE T+FMETSALES NVEN+FTEVLTQ YRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVATEDAKSFAERENTFFMETSALESLNVENAFTEVLTQIYRVVSR 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           K LDIGDDP  LPKGQTI++GSKDDVSAVKK GCCS+
Sbjct: 181 KALDIGDDPAALPKGQTINVGSKDDVSAVKKVGCCSA 217

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BLAST of CmaCh20G005830 vs. TrEMBL
Match: A0A068V7L3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00016799001 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 9.7e-106
Identity = 194/217 (89.40%), Postives = 207/217 (95.39%), Query Frame = 1


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLE+KSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           +VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLRHLRAVSMEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRAVS EDA+AFAERE T+FMETSALES NVEN+FTEVLTQ YRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           K L++G+DP  LPKGQTI++G+KDDVSAVKK GCCS+
Sbjct: 181 KALEVGEDPAALPKGQTINVGTKDDVSAVKKVGCCSA 217

[Close]

BLAST of CmaCh20G005830 vs. TrEMBL
Match: M5WIY2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011260mg PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 9.7e-106
Identity = 195/217 (89.86%), Postives = 205/217 (94.47%), Query Frame = 1


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLE+KSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           +VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSMEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNK DLRHLRAVS EDA+AFAERE T+FMETSALES NV+N+FTEVLTQ YRVVSR
Sbjct: 121 IMLVGNKGDLRHLRAVSTEDAKAFAERENTFFMETSALESMNVDNAFTEVLTQIYRVVSR 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           K LDIGDDP  LPKGQTI++G KDDVSAVKK GCCS+
Sbjct: 181 KALDIGDDPAALPKGQTINVGGKDDVSAVKKVGCCSA 217

[Close]

BLAST of CmaCh20G005830 vs. TAIR10
Match: AT5G60860.1 (AT5G60860.1 RAB GTPase homolog A1F)

HSP 1 Score: 386.7 bits (992), Expect = 9.2e-108
Identity = 194/217 (89.40%), Postives = 204/217 (94.01%), Query Frame = 1


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           M AYRADD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLE+KSTIGVEFATRSI VDDK
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSMEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IM VGNKADLRHLRAVS EDA+AFAERE T+FMETSALES NVEN+FTEVL+Q YRVVSR
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           K LDIGDDP  LPKGQTI++GSKDDVSAVKK GCCS+
Sbjct: 181 KALDIGDDPAALPKGQTINVGSKDDVSAVKKVGCCSN 217

[Close]

BLAST of CmaCh20G005830 vs. TAIR10
Match: AT3G15060.1 (AT3G15060.1 RAB GTPase homolog A1G)

HSP 1 Score: 376.3 bits (965), Expect = 1.2e-104
Identity = 188/217 (86.64%), Postives = 203/217 (93.55%), Query Frame = 1


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           M AYRADDDYD+L+KVVLIGDSGVGKSNLLSRFTRNEFSLE+KSTIGVEFATRSI VD+K
Sbjct: 1   MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HT+ NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120

Query: 121 IMLVGNKADLRHLRAVSMEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRAVS EDA+AFAERE T+FMETSALE+ NVEN+FTEVL+Q YRV S+
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           K LDIGDD T LPKGQ+I++GSKDDVS VKK GCCSS
Sbjct: 181 KALDIGDDHTTLPKGQSINVGSKDDVSEVKKVGCCSS 217

[Close]

BLAST of CmaCh20G005830 vs. TAIR10
Match: AT1G28550.1 (AT1G28550.1 RAB GTPase homolog A1I)

HSP 1 Score: 363.6 bits (932), Expect = 8.4e-101
Identity = 180/218 (82.57%), Postives = 202/218 (92.66%), Query Frame = 1


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRA+DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS ++++TIGVEFATRSI+ DDK
Sbjct: 1   MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSMEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRA+S E+A+AFAERE T+FMETSALE+ NV+N+FTEVLTQ YRVVS+
Sbjct: 121 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 180

Query: 181 KILDIGDDP-TVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           K L+ GDDP T LPKGQ I++G +DD+SAVKK GCCS+
Sbjct: 181 KALEAGDDPTTALPKGQMINVGGRDDISAVKKPGCCSA 218

[Close]

BLAST of CmaCh20G005830 vs. TAIR10
Match: AT2G33870.1 (AT2G33870.1 RAB GTPase homolog A1H)

HSP 1 Score: 360.9 bits (925), Expect = 5.4e-100
Identity = 179/218 (82.11%), Postives = 200/218 (91.74%), Query Frame = 1


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MG Y+A+DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +++STIGVEFATRSI+VDDK
Sbjct: 1   MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD N V
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTV 120

Query: 121 IMLVGNKADLRHLRAVSMEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADL HLRA+S E+ + FAERE T+FMETSALE+ NVEN+FTEVLTQ YRVVS+
Sbjct: 121 IMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSK 180

Query: 181 KILDIGDDP-TVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           K LD GDDP T LPKGQ I++GS+DDVSAVKK+GCC++
Sbjct: 181 KALDAGDDPTTALPKGQMINVGSRDDVSAVKKSGCCAT 218

[Close]

BLAST of CmaCh20G005830 vs. TAIR10
Match: AT4G18430.1 (AT4G18430.1 RAB GTPase homolog A1E)

HSP 1 Score: 359.4 bits (921), Expect = 1.6e-99
Identity = 175/216 (81.02%), Postives = 198/216 (91.67%), Query Frame = 1


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFK+VLIGDSGVGKSNLLSRFTRNEFS+E+KSTIGVEFATRS+ VD+K
Sbjct: 1   MGAYRADDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           I+KAQ+WDTAGQERYRAITSAYYRGAVGAL+VYD+TRH+TFENVERWLKELR HTD N+V
Sbjct: 61  IIKAQLWDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVV 120

Query: 121 IMLVGNKADLRHLRAVSMEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRAV  E+A++F+ERE  +FMETSAL++ NVE +FT VLTQ YRV+SR
Sbjct: 121 IMLVGNKADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSR 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCS 217
           K LD   DP  LPKGQTIDIG+KDDV+AVK +GCCS
Sbjct: 181 KALDGTGDPMSLPKGQTIDIGNKDDVTAVKSSGCCS 216

[Close]

BLAST of CmaCh20G005830 vs. NCBI nr
Match: gi|449468390|ref|XP_004151904.1| (PREDICTED: ras-related protein RABA1f-like [Cucumis sativus])

HSP 1 Score: 423.3 bits (1087), Expect = 2.5e-115
Identity = 215/217 (99.08%), Postives = 215/217 (99.08%), Query Frame = 1


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELR HTDHNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRSHTDHNIV 120

Query: 121 IMLVGNKADLRHLRAVSMEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRAVS EDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS
Sbjct: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 217

[Close]

BLAST of CmaCh20G005830 vs. NCBI nr
Match: gi|659111847|ref|XP_008455938.1| (PREDICTED: ras-related protein RABA1f-like [Cucumis melo])

HSP 1 Score: 420.6 bits (1080), Expect = 1.6e-114
Identity = 214/217 (98.62%), Postives = 214/217 (98.62%), Query Frame = 1


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELR HTDHNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRSHTDHNIV 120

Query: 121 IMLVGNKADLRHLRAVSMEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRAVS EDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           KILDIGDDPTV PKGQTIDIGSKDDVSAVKKAGCCSS
Sbjct: 181 KILDIGDDPTVPPKGQTIDIGSKDDVSAVKKAGCCSS 217

[Close]

BLAST of CmaCh20G005830 vs. NCBI nr
Match: gi|729326138|ref|XP_010535057.1| (PREDICTED: ras-related protein RABA1f [Tarenaya hassleriana])

HSP 1 Score: 392.9 bits (1008), Expect = 3.7e-106
Identity = 197/217 (90.78%), Postives = 206/217 (94.93%), Query Frame = 1


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           M AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLE+KSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLRHLRAVSMEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRAVS EDA+AFAERE T+FMETSALES NVEN+FTEVL+Q YRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           K LDIGDDP  LPKGQTI++GSKDDVSA+KK GCCSS
Sbjct: 181 KALDIGDDPAALPKGQTINVGSKDDVSAIKKVGCCSS 217

[Close]

BLAST of CmaCh20G005830 vs. NCBI nr
Match: gi|568829498|ref|XP_006469059.1| (PREDICTED: ras-related protein RABA1f-like [Citrus sinensis])

HSP 1 Score: 392.5 bits (1007), Expect = 4.8e-106
Identity = 195/217 (89.86%), Postives = 207/217 (95.39%), Query Frame = 1


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLE+KSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           +VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLRHLRAVSMEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRAVS EDAQ+FAE+E T+FMETSALES NVEN+FTEVLTQ YRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSR 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           K LD+GDDP  LPKGQTI+IG+KDDVSAVKK GCCS+
Sbjct: 181 KALDVGDDPAALPKGQTINIGTKDDVSAVKKTGCCSA 217

[Close]

BLAST of CmaCh20G005830 vs. NCBI nr
Match: gi|729347557|ref|XP_010542304.1| (PREDICTED: ras-related protein RABA1f-like [Tarenaya hassleriana])

HSP 1 Score: 392.5 bits (1007), Expect = 4.8e-106
Identity = 198/217 (91.24%), Postives = 206/217 (94.93%), Query Frame = 1


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           M AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLE+KSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSMEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRAVS EDA+AFAERE T+FMETSALES NVENSFTEVL+Q YRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENSFTEVLSQIYRVVSR 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           K LDIG+DP  LPKGQTI++GSKDDVSAVKK GCCSS
Sbjct: 181 KALDIGEDPAALPKGQTINVGSKDDVSAVKKVGCCSS 217

The following BLAST results are available for this feature:

BLAST of CmaCh20G005830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAA1F_ARATH	1.6e-106	89.40	Ras-related protein RABA1f OS=Arabidopsis thaliana GN=RABA1F PE=2 SV=1	[more]
RAA1G_ARATH	2.2e-103	86.64	Ras-related protein RABA1g OS=Arabidopsis thaliana GN=RABA1G PE=2 SV=1	[more]
RB11B_TOBAC	2.2e-103	86.57	Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1	[more]
RAA1I_ARATH	1.5e-99	82.57	Ras-related protein RABA1i OS=Arabidopsis thaliana GN=RABA1I PE=2 SV=1	[more]
RAA1H_ARATH	9.6e-99	82.11	Ras-related protein RABA1h OS=Arabidopsis thaliana GN=RABA1H PE=2 SV=1	[more]

BLAST of CmaCh20G005830 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LN26_CUCSA	1.8e-115	99.08	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G415550 PE=4 SV=1	[more]
G7IFI5_MEDTR	4.3e-106	89.40	RAB GTPase-like protein A1D OS=Medicago truncatula GN=MTR_2g014990 PE=4 SV=1	[more]
A0A061GFC3_THECC	9.7e-106	89.86	RAB GTPase A1F OS=Theobroma cacao GN=TCM_029778 PE=4 SV=1	[more]
A0A068V7L3_COFCA	9.7e-106	89.40	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00016799001 PE=4 SV=1	[more]
M5WIY2_PRUPE	9.7e-106	89.86	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011260mg PE=4 SV=1	[more]

BLAST of CmaCh20G005830 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G60860.1	9.2e-108	89.40	RAB GTPase homolog A1F	[more]
AT3G15060.1	1.2e-104	86.64	RAB GTPase homolog A1G	[more]
AT1G28550.1	8.4e-101	82.57	RAB GTPase homolog A1I	[more]
AT2G33870.1	5.4e-100	82.11	RAB GTPase homolog A1H	[more]
AT4G18430.1	1.6e-99	81.02	RAB GTPase homolog A1E	[more]

BLAST of CmaCh20G005830 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449468390\|ref\|XP_004151904.1\|	2.5e-115	99.08	PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]	[more]
gi\|659111847\|ref\|XP_008455938.1\|	1.6e-114	98.62	PREDICTED: ras-related protein RABA1f-like [Cucumis melo]	[more]
gi\|729326138\|ref\|XP_010535057.1\|	3.7e-106	90.78	PREDICTED: ras-related protein RABA1f [Tarenaya hassleriana]	[more]
gi\|568829498\|ref\|XP_006469059.1\|	4.8e-106	89.86	PREDICTED: ras-related protein RABA1f-like [Citrus sinensis]	[more]
gi\|729347557\|ref\|XP_010542304.1\|	4.8e-106	91.24	PREDICTED: ras-related protein RABA1f-like [Tarenaya hassleriana]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0005622	intracellular
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G005830.1	CmaCh20G005830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 15..174 score: 5.8
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 12..170 score: 7.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 6..215 score: 1.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..180 score: 5.06
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 14..35 score: 1.2E-40coord: 37..53 score: 1.2E-40coord: 55..77 score: 1.2E-40coord: 117..130 score: 1.2E-40coord: 152..174 score: 1.2
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 1..217 score: 5.7E
None	No IPR available	PANTHER	PTHR24073:SF553	RAS-RELATED PROTEIN RABA1G	coord: 1..217 score: 5.7E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 score: 9.9
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 16..173 score: 9.4
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 score: 4.8E
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..216 score: 9.
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..179 score: 0.
None	No IPR available	PROFILE	PS51419	RAB	coord: 9..215 score: 35

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh20G005830	Cucsa.309450	Cucumber (Gy14) v1	cgycmaB0852
CmaCh20G005830	Csa2G415550	Cucumber (Chinese Long) v2	cmacuB539
CmaCh20G005830	MELO3C019318	Melon (DHL92) v3.5.1	cmameB502
CmaCh20G005830	ClCG02G010130	Watermelon (Charleston Gray)	cmawcgB501
CmaCh20G005830	CSPI02G26060	Wild cucumber (PI 183967)	cmacpiB545
CmaCh20G005830	CmoCh02G001970	Cucurbita moschata (Rifu)	cmacmoB561
CmaCh20G005830	CmoCh20G006510	Cucurbita moschata (Rifu)	cmacmoB552
CmaCh20G005830	Lsi10G000910	Bottle gourd (USVL1VR-Ls)	cmalsiB501
CmaCh20G005830	Cp4.1LG16g04180	Cucurbita pepo (Zucchini)	cmacpeB562
CmaCh20G005830	Cp4.1LG05g14150	Cucurbita pepo (Zucchini)	cmacpeB578
CmaCh20G005830	MELO3C019318.2	Melon (DHL92) v3.6.1	cmamedB579
CmaCh20G005830	CsaV3_2G034570	Cucumber (Chinese Long) v3	cmacucB0650
CmaCh20G005830	Cla97C02G036260	Watermelon (97103) v2	cmawmbB589
CmaCh20G005830	Bhi10G001073	Wax gourd	cmawgoB0685
CmaCh20G005830	CsGy2G025660	Cucumber (Gy14) v2	cgybcmaB217
CmaCh20G005830	Carg05119	Silver-seed gourd	carcmaB1123
CmaCh20G005830	Carg03111	Silver-seed gourd	carcmaB0472

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh20G005830	CmaCh02G001910	Cucurbita maxima (Rimu)	cmacmaB477

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh20G005830	Cucurbita maxima (Rimu)	cmacmaB157
CmaCh20G005830	Cucurbita maxima (Rimu)	cmacmaB443
CmaCh20G005830	Cucumber (Gy14) v1	cgycmaB0042
CmaCh20G005830	Cucumber (Gy14) v1	cgycmaB0408
CmaCh20G005830	Cucurbita moschata (Rifu)	cmacmoB540
CmaCh20G005830	Cucurbita moschata (Rifu)	cmacmoB547
CmaCh20G005830	Wild cucumber (PI 183967)	cmacpiB567
CmaCh20G005830	Wild cucumber (PI 183967)	cmacpiB576
CmaCh20G005830	Cucumber (Chinese Long) v2	cmacuB569
CmaCh20G005830	Melon (DHL92) v3.5.1	cmameB513
CmaCh20G005830	Watermelon (Charleston Gray)	cmawcgB480
CmaCh20G005830	Watermelon (Charleston Gray)	cmawcgB494
CmaCh20G005830	Watermelon (97103) v1	cmawmB521
CmaCh20G005830	Watermelon (97103) v1	cmawmB543
CmaCh20G005830	Cucurbita pepo (Zucchini)	cmacpeB559
CmaCh20G005830	Cucurbita pepo (Zucchini)	cmacpeB574
CmaCh20G005830	Bottle gourd (USVL1VR-Ls)	cmalsiB513
CmaCh20G005830	Cucumber (Gy14) v2	cgybcmaB797
CmaCh20G005830	Cucumber (Gy14) v2	cgybcmaB953
CmaCh20G005830	Melon (DHL92) v3.6.1	cmamedB590
CmaCh20G005830	Melon (DHL92) v3.6.1	cmamedB602
CmaCh20G005830	Cucumber (Chinese Long) v3	cmacucB0674
CmaCh20G005830	Cucumber (Chinese Long) v3	cmacucB0684
CmaCh20G005830	Watermelon (97103) v2	cmawmbB575
CmaCh20G005830	Watermelon (97103) v2	cmawmbB582