CmaCh20G004760 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh20G004760
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_24
Location	Cma_Chr20 : 2302183 .. 2303989 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCCTTTACTGTTCTTATCCCTCCTCTCCTGTTTCCACAGATCTCGATTTGCAGAAAGATCGGCGTTAATTCAACTCAGTTCACTACATTCATTGCAATTAATGGACCCTAAGCTTACTCAGATTCCAGGTATTCATCCGTTTCCGTTTTTCGTCATTCATTTCCTCTGAATTTCATTACTGATTTTTCCAAATTTGATTCAAATCGGCAGCGAAATCCCTTTCCTCGAAACCGAAATTCATCCGAAAGCCATCTTACGAAGCACCGAAAATCACTGCCTATCAACCTCCGATTTCCAGGTACTACATCGCTTTATTATTCTCAGTTTCATTCTGAATCGAGTTCTTCTGTATTAGGGTTTGAATCTTGTTATTACAATTAGACAGAAACGAGTTTTCGGAACTGTTCGAAGCTCAAACATACCGATCAAGCCAGTAAATGAAAATCCCTTAGGCAAGCCCTTAATTGGAGCTATTAAGAAACAACCTAAATCCACCCGATTACCTCAAATCGCGGTCAATGTTACTGCTGATCAGAAGATTAATGAAAAATTGAATCCGAGGCCCAAGAAAAAGAGCCCTAGCATCAAACAGCAAGTTACGGAAACGGCCCTTAAGGATCTGCGAGTTCAGAACGACGTCGTAGAGCCTCATACGCCAGTGATAAGACCTCGGTTGTTGAAGTCGAAGAACGCCGGCACCCCTTACCATACGGCGGAAAAATGTAGTAACTGCCGTTTTGACAAGATGGAGACCTCGTCATATTGGGTTGCTCAGATCAAATTGGCTGAGTCCGCTGGCAAGCATTTTGTGTCGGCTGATTTCTTTCGCCTTGCTTATATCTGCAATGCCGAGGTTAGTGTAAATTACATATTTGAACATCATATCCAGTTAATTATATTTGCCTCTATGAAAATTAAGGTTAAGGAAAGTAAGTTTATCAGGACCAGTAGTTAATCACATAGTTTTGGTAGTGTTTATGAGCTTAGAACTATAGAAAGGAAGTTCTTTGATTTCAAACGCTGAGATGCCAATATGGGTTTGGATTTTCTGGGGAAAATATCCATTTAAATTGTCCTCCAATGAACTGGGCAAAGCATTTTTCTTTTAATGATGTTATGAAATCACAAAGAATCCAGTTAAGAATTTGTGGCTGGCAATAAGAACAAGAGTTTCCCTGAATTTCTTTGTGATCTTTTGGATCTGCTCGGATTTCAGTTTTTACCTTCAGATTTATAATGATTTGTGGTTTATTATAACAGCCGATCAGGAACCTCAGAGTCGAACTAAAGCGTTACTTGACTCGACATGAACATCTATCAATGAACACTGAGTGGAAGGATGTGAGTTTTAGCTACGGCTTAATTCAAGATGACGACAATGGCGGCCCCAAGAATCCGTCCACTGAAATTTGTGGCAGTGAAATCAACAAAGATCATCAGATTGCGGCAATGGAATCTGGGACACCAGAAATCAGTAGCAGTAAACTTGACAAAGATGAGATTGTGGGAGCCGATGTTGGCGAGCTAGGAACCGAGACAAGTCAAAGATGGCCAAATTCTTTGTCTGTAGAACCGGACAGATCCATCAAAGCTGACAGGTGAACTTGATTTTATAGCCTTAGTTCATAGCCATTACTGTGCATGTGTTGTGTAAATGAATGTACTGTCCTTTGTGCTTGGCATTGCCTTTTTCACATTCCATTTCGTAGACCAGGCAAAATGACTTCAATATTGTTATTCTAAGTTATATATAATATATGGCTTACCCGTTAGTATTCCATTTGTTGTAGGGTAACAGCTTAAAC

mRNA sequence

AATCCTTTACTGTTCTTATCCCTCCTCTCCTGTTTCCACAGATCTCGATTTGCAGAAAGATCGGCGTTAATTCAACTCAGTTCACTACATTCATTGCAATTAATGGACCCTAAGCTTACTCAGATTCCAGCGAAATCCCTTTCCTCGAAACCGAAATTCATCCGAAAGCCATCTTACGAAGCACCGAAAATCACTGCCTATCAACCTCCGATTTCCAGACAGAAACGAGTTTTCGGAACTGTTCGAAGCTCAAACATACCGATCAAGCCAGTAAATGAAAATCCCTTAGGCAAGCCCTTAATTGGAGCTATTAAGAAACAACCTAAATCCACCCGATTACCTCAAATCGCGGTCAATGTTACTGCTGATCAGAAGATTAATGAAAAATTGAATCCGAGGCCCAAGAAAAAGAGCCCTAGCATCAAACAGCAAGTTACGGAAACGGCCCTTAAGGATCTGCGAGTTCAGAACGACGTCGTAGAGCCTCATACGCCAGTGATAAGACCTCGGTTGTTGAAGTCGAAGAACGCCGGCACCCCTTACCATACGGCGGAAAAATGTAGTAACTGCCGTTTTGACAAGATGGAGACCTCGTCATATTGGGTTGCTCAGATCAAATTGGCTGAGTCCGCTGGCAAGCATTTTGTGTCGGCTGATTTCTTTCGCCTTGCTTATATCTGCAATGCCGAGCCGATCAGGAACCTCAGAGTCGAACTAAAGCGTTACTTGACTCGACATGAACATCTATCAATGAACACTGAGTGGAAGGATGTGAGTTTTAGCTACGGCTTAATTCAAGATGACGACAATGGCGGCCCCAAGAATCCGTCCACTGAAATTTGTGGCAGTGAAATCAACAAAGATCATCAGATTGCGGCAATGGAATCTGGGACACCAGAAATCAGTAGCAGTAAACTTGACAAAGATGAGATTGTGGGAGCCGATGTTGGCGAGCTAGGAACCGAGACAAGTCAAAGATGGCCAAATTCTTTGTCTGTAGAACCGGACAGATCCATCAAAGCTGACAGGTGAACTTGATTTTATAGCCTTAGTTCATAGCCATTACTGTGCATGTGTTGTGTAAATGAATGTACTGTCCTTTGTGCTTGGCATTGCCTTTTTCACATTCCATTTCGTAGACCAGGCAAAATGACTTCAATATTGTTATTCTAAGTTATATATAATATATGGCTTACCCGTTAGTATTCCATTTGTTGTAGGGTAACAGCTTAAAC

Coding sequence (CDS)

ATGGACCCTAAGCTTACTCAGATTCCAGCGAAATCCCTTTCCTCGAAACCGAAATTCATCCGAAAGCCATCTTACGAAGCACCGAAAATCACTGCCTATCAACCTCCGATTTCCAGACAGAAACGAGTTTTCGGAACTGTTCGAAGCTCAAACATACCGATCAAGCCAGTAAATGAAAATCCCTTAGGCAAGCCCTTAATTGGAGCTATTAAGAAACAACCTAAATCCACCCGATTACCTCAAATCGCGGTCAATGTTACTGCTGATCAGAAGATTAATGAAAAATTGAATCCGAGGCCCAAGAAAAAGAGCCCTAGCATCAAACAGCAAGTTACGGAAACGGCCCTTAAGGATCTGCGAGTTCAGAACGACGTCGTAGAGCCTCATACGCCAGTGATAAGACCTCGGTTGTTGAAGTCGAAGAACGCCGGCACCCCTTACCATACGGCGGAAAAATGTAGTAACTGCCGTTTTGACAAGATGGAGACCTCGTCATATTGGGTTGCTCAGATCAAATTGGCTGAGTCCGCTGGCAAGCATTTTGTGTCGGCTGATTTCTTTCGCCTTGCTTATATCTGCAATGCCGAGCCGATCAGGAACCTCAGAGTCGAACTAAAGCGTTACTTGACTCGACATGAACATCTATCAATGAACACTGAGTGGAAGGATGTGAGTTTTAGCTACGGCTTAATTCAAGATGACGACAATGGCGGCCCCAAGAATCCGTCCACTGAAATTTGTGGCAGTGAAATCAACAAAGATCATCAGATTGCGGCAATGGAATCTGGGACACCAGAAATCAGTAGCAGTAAACTTGACAAAGATGAGATTGTGGGAGCCGATGTTGGCGAGCTAGGAACCGAGACAAGTCAAAGATGGCCAAATTCTTTGTCTGTAGAACCGGACAGATCCATCAAAGCTGACAGGTGA

Protein sequence

MDPKLTQIPAKSLSSKPKFIRKPSYEAPKITAYQPPISRQKRVFGTVRSSNIPIKPVNENPLGKPLIGAIKKQPKSTRLPQIAVNVTADQKINEKLNPRPKKKSPSIKQQVTETALKDLRVQNDVVEPHTPVIRPRLLKSKNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESAGKHFVSADFFRLAYICNAEPIRNLRVELKRYLTRHEHLSMNTEWKDVSFSYGLIQDDDNGGPKNPSTEICGSEINKDHQIAAMESGTPEISSSKLDKDEIVGADVGELGTETSQRWPNSLSVEPDRSIKADR

Homology

[Close]

BLAST of CmaCh20G004760 vs. TrEMBL
Match: A0A0A0KCP5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G292420 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 1.7e-124
Identity = 237/302 (78.48%), Postives = 261/302 (86.42%), Query Frame = 1


Query: 1   MDPKLTQIPAKSLSSKPKFIRKPSYEAPKITAYQPPISRQKRVFGTVRSSNIPIKPV-NE 60
           MDPKLT IPAK +SSKPKF RKPS EAP+ITA+QP ISRQ RVFGTVRSSNIP+KPV NE
Sbjct: 1   MDPKLTHIPAKPISSKPKFTRKPS-EAPQITAHQPQISRQNRVFGTVRSSNIPVKPVVNE 60

Query: 61  NPLGKPLIGAIKKQPKSTRLPQIAVNVTADQKINEKLNPRPKKKSPSIKQQVTETALKDL 120
            PL  P+IG +KKQPKS RL QI+VN T D+KINEKLNPR KKKSP I+QQVTETA+K L
Sbjct: 61  KPLTNPVIGGVKKQPKS-RLAQISVNATVDRKINEKLNPRLKKKSPGIQQQVTETAVKGL 120

Query: 121 RVQNDVVEPHTPVIRPRLLKSKNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESAGK 180
           R  NDVVEP TPV RPRLLK KN GTPYHTAEKCSNCRFDKMETSSYWVAQIKLAES GK
Sbjct: 121 RDGNDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGK 180

Query: 181 HFVSADFFRLAYICNAEPIRNLRVELKRYLTRHEHLSMNTEWKDVSFSYGLIQDDDNG-G 240
           H+VSADFFRLAY+CNAEPIRNL+VELKRYLTRHEHLSMNTEWKDVS SYGL+Q+D NG  
Sbjct: 181 HWVSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQNDINGAS 240

Query: 241 PKNPSTEICGSEINKDHQIAAMESGTPEISSSKLDKDEIVGADVGELGTETSQRWPNSLS 300
           P NPSTE CG+EINKD     +++ TPEISSSKL KDEIVG DVG++GTET+Q+W N LS
Sbjct: 241 PHNPSTETCGNEINKD-----LQTVTPEISSSKLVKDEIVGTDVGKVGTETTQKWVNYLS 295

[Close]

BLAST of CmaCh20G004760 vs. TrEMBL
Match: K4DA77_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.7e-47
Identity = 125/282 (44.33%), Postives = 165/282 (58.51%), Query Frame = 1


Query: 1   MDPKLTQIPAKSLSSKPKFIRKPSYEAPKITAYQPPISRQKRVFGTVRSSNIPIKPVNEN 60
           MD   T  P K  S K +F +  S +APKI + +P I RQ RVFGT+RS+N+P K V E 
Sbjct: 5   MDLHPTPFPGKYQSVKSRFNKNIS-KAPKIQSKEPSIPRQNRVFGTIRSTNVPTKTVVEK 64

Query: 61  PLGKPLIGAIKKQPKSTR----LPQIAVNVTADQKINEKLNPRPKKKSPSIKQQVTETAL 120
           PL K   G  ++Q KS +    L   AVN        E+   + +KKS   ++       
Sbjct: 65  PLAKSSSGVSQRQLKSPKKTQSLTDSAVNSVTKSAKKEENRAKTRKKSVCFREN------ 124

Query: 121 KDLRVQNDVVEPHTPVIRPRLLKSKNAG--TPYHTAEKCSNCRFDKMETSSYWVAQIKLA 180
           +D+ V     EP TPV  P L K + +G  TP+H+AEKCS CRFD++ETSSYW++QIKLA
Sbjct: 125 RDVAVAASAAEPKTPVKSPVLAKPRLSGSTTPFHSAEKCSKCRFDRLETSSYWLSQIKLA 184

Query: 181 ESAGKHFVSADFFRLAYICNAEPIRNLRVELKRYLTRHEHLSMNTEWKDVSFSYGLIQDD 240
           E+  KH VSA FF+LA+   AEP RN+ +ELKRYL RH+HLS   EWK+V FSYGL++D+
Sbjct: 185 ENVEKHSVSAAFFQLAFDTKAEPFRNILLELKRYLRRHKHLSEGKEWKEVCFSYGLLKDE 244

Query: 241 DNGGPKNPSTEICGSEINKDHQIAAMESGTPEISSSKLDKDE 277
            N   K     I  S  NK+ +    E    E+    L+ DE
Sbjct: 245 SNSKDK-----IGNSSKNKEIE---KEKEEEELKWLNLEVDE 271

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BLAST of CmaCh20G004760 vs. TrEMBL
Match: M1AE58_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400008064 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 3.8e-47
Identity = 126/285 (44.21%), Postives = 164/285 (57.54%), Query Frame = 1


Query: 1   MDPKLTQIPAKSLSSKPKFIRKPSYEAPKITAYQPPISRQKRVFGTVRSSNIPIKPVNEN 60
           MD   T  P K  S K +F +  S +APKI + +P I RQ RVFGTVRS+N+P K V+  
Sbjct: 5   MDLHPTPFPGKFQSVKSRFNKNIS-KAPKIQSKEPSIPRQNRVFGTVRSTNVPTKTVSGK 64

Query: 61  PLGKPLIGAIKK---QPKSTR-LPQIAVNVTADQKINEKLNPRPKKKSPSIKQQVTETAL 120
           PL K   G  +K    PK T+ L   AVN   +    E+   + +KKS   ++     A 
Sbjct: 65  PLAKSSSGVPQKPLKSPKKTQSLTDSAVNPLTESAKKEENRAKTRKKSVCFRENRDVVA- 124

Query: 121 KDLRVQNDVVEPHTPVIRPRLLKSKNAG--TPYHTAEKCSNCRFDKMETSSYWVAQIKLA 180
                     EP TPV  P L K + +G  TP+H+AEKCS CRFD++ETSSYW++QIKLA
Sbjct: 125 --------AAEPKTPVKSPVLAKPRLSGSTTPFHSAEKCSKCRFDRLETSSYWLSQIKLA 184

Query: 181 ESAGKHFVSADFFRLAYICNAEPIRNLRVELKRYLTRHEHLSMNTEWKDVSFSYGLIQDD 240
           E+ GKH VSA FFRLA+   AEP RN+ +ELKRYL RH+HLS   EW+ V FSYGL++D+
Sbjct: 185 ENVGKHSVSAAFFRLAFDTKAEPFRNILLELKRYLRRHKHLSEGKEWEKVCFSYGLLKDE 244

Query: 241 DNGGPKNPSTEICGSEINKDHQIAAMESGTPEISSSKLDKDEIVG 280
            N   K  ++     EI  +  I   E    E+    L+ DE  G
Sbjct: 245 SNSEDKIGNSS-KNKEIELECTIVEKEKEEEELKWLNLEVDEEYG 278

[Close]

BLAST of CmaCh20G004760 vs. TrEMBL
Match: F6GTZ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g03110 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.2e-46
Identity = 114/236 (48.31%), Postives = 144/236 (61.02%), Query Frame = 1


Query: 1   MDPKLTQIPAKSLSSKPKFIRKPSYEAPKITAYQPPISRQKRVFGTVRSSNIPIKPVNEN 60
           MD   TQ   K  S K +   K   E  K  +  PPI+R+KR FGT RS+NIP K   E 
Sbjct: 1   MDLHSTQFAGKVQSLKSRTAGKNVREE-KNNSKDPPIAREKRAFGTSRSTNIPAKTETEK 60

Query: 61  PLGKPLIGAIKKQPKSTRLPQIAVNVTADQKINEKLNPRPKKKSPSIKQQVTETALKDLR 120
           P  KP  GA +KQ KS+R          ++K+ EK   R KK S   +++V E+  K   
Sbjct: 61  PAIKPTTGATQKQSKSSRA------TAEEKKLPEKNKARLKKNSVCFQEKVAESPAKQ-- 120

Query: 121 VQNDVVEPHTPVIRPRLLKSKNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESAGKH 180
                  P TP  +P++       TPYHTAE CS CRFD++ET++YW+AQIKL+ES GKH
Sbjct: 121 ---HADGPRTPAAKPKV------STPYHTAENCSKCRFDRLETATYWLAQIKLSESVGKH 180

Query: 181 FVSADFFRLAYICNAEPIRNLRVELKRYLTRHEHLSMNTEWKDVSFSYGLIQDDDN 237
           FVSA FFRLA  C AEPIRN+R ELKRYL RH HL  + EWKDV+ SYGLI+++ +
Sbjct: 181 FVSAAFFRLALECKAEPIRNIRNELKRYLGRHGHLLGSNEWKDVNESYGLIENESS 218

[Close]

BLAST of CmaCh20G004760 vs. TrEMBL
Match: A0A068UG23_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024268001 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.6e-45
Identity = 123/288 (42.71%), Postives = 165/288 (57.29%), Query Frame = 1


Query: 6   TQIPAKSLSSKPKFIRKPSYEAPKITAYQPPISRQKRVFGTVRSSNIPIKPV-NENPLGK 65
           T  P K+   K +   K S EAPK+   +  ++R++RVFGTVR+ N P KPV NE P  K
Sbjct: 7   TPFPGKTRVLKSRTDGKAS-EAPKVNVKESHVNRERRVFGTVRNQNAPTKPVTNEKPTKK 66

Query: 66  PLIGAIKKQPKSTRLPQIAVNVTA--DQKINEKLN--PRPKKKSPSIKQQVTETALKDLR 125
           P    + ++P    +   AV  TA   +K +E  N   R KKK+ +   +V E   K L+
Sbjct: 67  PF-SVVPQKPAKMPINATAVEETAATPKKPSENNNVVARSKKKTVNFCDKVEENKDKILQ 126

Query: 126 VQNDVVEPHTPVIRPRLLKSKNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESAGKH 185
             + +    TP+  P L+K    GTPYH+AE+CS CRFDK+ETSSYW+ QI+LAES GKH
Sbjct: 127 EGDVLAGVQTPLRSPFLVKPNVVGTPYHSAERCSKCRFDKLETSSYWLGQIRLAESVGKH 186

Query: 186 FVSADFFRLAYICNAEPIRNLRVELKRYLTRHEHLSMNTEWKDVSFSYGLIQDDDNGGPK 245
           FVSA FFRLA  C AEP RN +VELK+YL RHE+L    EWKD+  SYGL++++      
Sbjct: 187 FVSAAFFRLAAECKAEPFRNTKVELKKYLGRHEYLCGEKEWKDLCISYGLMKEE------ 246

Query: 246 NPSTEICGSEINKDHQIAAMESGTPEISSSKLDKDEIVGADVGELGTE 289
               E      NK+ + A  +SG P  +  + +K        GE G E
Sbjct: 247 ----EAIEGHNNKEEE-AIEDSGHPGDTRDEQEKQITEPVVAGEPGNE 281

[Close]

BLAST of CmaCh20G004760 vs. TAIR10
Match: AT5G62550.1 (AT5G62550.1 unknown protein)

HSP 1 Score: 60.8 bits (146), Expect = 1.7e-09
Identity = 42/156 (26.92%), Postives = 73/156 (46.79%), Query Frame = 1


Query: 126 VEPHTPVIRPRLLKSKNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESAGKHFVSAD 185
           V+P    I PR           +     +  + + + +S+YW+  IKLAES  KH +S  
Sbjct: 107 VKPKRSRIVPRSFNETTTPVSSNLRSSVTRKKVEDLSSSTYWLTHIKLAESVAKHSISLG 166

Query: 186 FFRLAYICNAEPIRNLRVELKRYLTRHEHLSMNTEWKDVSFSYGLIQDDDNGGPKNPST- 245
           FF+LA     EP+  ++ ELK Y  R+    +    K++S  Y + ++ +       S+ 
Sbjct: 167 FFKLALHAGCEPLDKMKEELKLYARRNNMDGLADAMKELSELYNISEESNQVQVSETSSV 226

Query: 246 --EICGSEINKDHQIAAMESGTPEIS--SSKLDKDE 277
             E     +N D+ + +  S TP  S  +S++ KD+
Sbjct: 227 VAEETAMSLNNDNDVQSSFS-TPGNSNITSEITKDD 261

[Close]

BLAST of CmaCh20G004760 vs. NCBI nr
Match: gi|659127863|ref|XP_008463928.1| (PREDICTED: uncharacterized protein LOC103501937 [Cucumis melo])

HSP 1 Score: 458.8 bits (1179), Expect = 7.7e-126
Identity = 239/302 (79.14%), Postives = 263/302 (87.09%), Query Frame = 1


Query: 1   MDPKLTQIPAKSLSSKPKFIRKPSYEAPKITAYQPPISRQKRVFGTVRSSNIPIKPV-NE 60
           MDPKLTQIPAK +SSKPKF RKPS EAP+ITA+QP ISRQKRVFGTVRSSNIPIKPV NE
Sbjct: 1   MDPKLTQIPAKPISSKPKFTRKPS-EAPQITAHQPQISRQKRVFGTVRSSNIPIKPVVNE 60

Query: 61  NPLGKPLIGAIKKQPKSTRLPQIAVNVTADQKINEKLNPRPKKKSPSIKQQVTETALKDL 120
            PL KP+IG +KKQPK  RLPQI+VN T D+KINEKLNPR KKKSP I+QQVTETA+KDL
Sbjct: 61  KPLTKPVIGGVKKQPKP-RLPQISVNATVDRKINEKLNPRLKKKSPGIQQQVTETAVKDL 120

Query: 121 RVQNDVVEPHTPVIRPRLLKSKNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESAGK 180
           R  +DVVEP TPV RPR LK KN GTPYHTAEKCSNCRFDKMETSSYWVAQIKLAES GK
Sbjct: 121 RDGDDVVEPQTPVARPRFLKLKNGGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGK 180

Query: 181 HFVSADFFRLAYICNAEPIRNLRVELKRYLTRHEHLSMNTEWKDVSFSYGLIQDDDNG-G 240
           HFVSADFFRLAY+CNAEPIRNL+VELKRYLTRHEHLSMNTEWKDVS SYGL+Q+D NG  
Sbjct: 181 HFVSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQNDTNGAS 240

Query: 241 PKNPSTEICGSEINKDHQIAAMESGTPEISSSKLDKDEIVGADVGELGTETSQRWPNSLS 300
           P NP+TEI G+EINK      +++ TPEISSSKL KDEIVG DV E+GTET+Q+W NS+S
Sbjct: 241 PHNPATEISGNEINK------LQTVTPEISSSKLVKDEIVGTDVSEIGTETTQKWVNSMS 294

[Close]

BLAST of CmaCh20G004760 vs. NCBI nr
Match: gi|449463649|ref|XP_004149544.1| (PREDICTED: uncharacterized protein LOC101212258 [Cucumis sativus])

HSP 1 Score: 453.8 bits (1166), Expect = 2.5e-124
Identity = 237/302 (78.48%), Postives = 261/302 (86.42%), Query Frame = 1


Query: 1   MDPKLTQIPAKSLSSKPKFIRKPSYEAPKITAYQPPISRQKRVFGTVRSSNIPIKPV-NE 60
           MDPKLT IPAK +SSKPKF RKPS EAP+ITA+QP ISRQ RVFGTVRSSNIP+KPV NE
Sbjct: 1   MDPKLTHIPAKPISSKPKFTRKPS-EAPQITAHQPQISRQNRVFGTVRSSNIPVKPVVNE 60

Query: 61  NPLGKPLIGAIKKQPKSTRLPQIAVNVTADQKINEKLNPRPKKKSPSIKQQVTETALKDL 120
            PL  P+IG +KKQPKS RL QI+VN T D+KINEKLNPR KKKSP I+QQVTETA+K L
Sbjct: 61  KPLTNPVIGGVKKQPKS-RLAQISVNATVDRKINEKLNPRLKKKSPGIQQQVTETAVKGL 120

Query: 121 RVQNDVVEPHTPVIRPRLLKSKNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESAGK 180
           R  NDVVEP TPV RPRLLK KN GTPYHTAEKCSNCRFDKMETSSYWVAQIKLAES GK
Sbjct: 121 RDGNDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGK 180

Query: 181 HFVSADFFRLAYICNAEPIRNLRVELKRYLTRHEHLSMNTEWKDVSFSYGLIQDDDNG-G 240
           H+VSADFFRLAY+CNAEPIRNL+VELKRYLTRHEHLSMNTEWKDVS SYGL+Q+D NG  
Sbjct: 181 HWVSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQNDINGAS 240

Query: 241 PKNPSTEICGSEINKDHQIAAMESGTPEISSSKLDKDEIVGADVGELGTETSQRWPNSLS 300
           P NPSTE CG+EINKD     +++ TPEISSSKL KDEIVG DVG++GTET+Q+W N LS
Sbjct: 241 PHNPSTETCGNEINKD-----LQTVTPEISSSKLVKDEIVGTDVGKVGTETTQKWVNYLS 295

[Close]

BLAST of CmaCh20G004760 vs. NCBI nr
Match: gi|723745743|ref|XP_004251399.2| (PREDICTED: uncharacterized protein LOC101249148 isoform X1 [Solanum lycopersicum])

HSP 1 Score: 198.0 bits (502), Expect = 2.5e-47
Identity = 125/282 (44.33%), Postives = 165/282 (58.51%), Query Frame = 1


Query: 1   MDPKLTQIPAKSLSSKPKFIRKPSYEAPKITAYQPPISRQKRVFGTVRSSNIPIKPVNEN 60
           MD   T  P K  S K +F +  S +APKI + +P I RQ RVFGT+RS+N+P K V E 
Sbjct: 5   MDLHPTPFPGKYQSVKSRFNKNIS-KAPKIQSKEPSIPRQNRVFGTIRSTNVPTKTVVEK 64

Query: 61  PLGKPLIGAIKKQPKSTR----LPQIAVNVTADQKINEKLNPRPKKKSPSIKQQVTETAL 120
           PL K   G  ++Q KS +    L   AVN        E+   + +KKS   ++       
Sbjct: 65  PLAKSSSGVSQRQLKSPKKTQSLTDSAVNSVTKSAKKEENRAKTRKKSVCFREN------ 124

Query: 121 KDLRVQNDVVEPHTPVIRPRLLKSKNAG--TPYHTAEKCSNCRFDKMETSSYWVAQIKLA 180
           +D+ V     EP TPV  P L K + +G  TP+H+AEKCS CRFD++ETSSYW++QIKLA
Sbjct: 125 RDVAVAASAAEPKTPVKSPVLAKPRLSGSTTPFHSAEKCSKCRFDRLETSSYWLSQIKLA 184

Query: 181 ESAGKHFVSADFFRLAYICNAEPIRNLRVELKRYLTRHEHLSMNTEWKDVSFSYGLIQDD 240
           E+  KH VSA FF+LA+   AEP RN+ +ELKRYL RH+HLS   EWK+V FSYGL++D+
Sbjct: 185 ENVEKHSVSAAFFQLAFDTKAEPFRNILLELKRYLRRHKHLSEGKEWKEVCFSYGLLKDE 244

Query: 241 DNGGPKNPSTEICGSEINKDHQIAAMESGTPEISSSKLDKDE 277
            N   K     I  S  NK+ +    E    E+    L+ DE
Sbjct: 245 SNSKDK-----IGNSSKNKEIE---KEKEEEELKWLNLEVDE 271

[Close]

BLAST of CmaCh20G004760 vs. NCBI nr
Match: gi|971538461|ref|XP_006340146.2| (PREDICTED: uncharacterized protein LOC102602435 [Solanum tuberosum])

HSP 1 Score: 196.8 bits (499), Expect = 5.5e-47
Identity = 126/285 (44.21%), Postives = 164/285 (57.54%), Query Frame = 1


Query: 1   MDPKLTQIPAKSLSSKPKFIRKPSYEAPKITAYQPPISRQKRVFGTVRSSNIPIKPVNEN 60
           MD   T  P K  S K +F +  S +APKI + +P I RQ RVFGTVRS+N+P K V+  
Sbjct: 5   MDLHPTPFPGKFQSVKSRFNKNIS-KAPKIQSKEPSIPRQNRVFGTVRSTNVPTKTVSGK 64

Query: 61  PLGKPLIGAIKK---QPKSTR-LPQIAVNVTADQKINEKLNPRPKKKSPSIKQQVTETAL 120
           PL K   G  +K    PK T+ L   AVN   +    E+   + +KKS   ++     A 
Sbjct: 65  PLAKSSSGVPQKPLKSPKKTQSLTDSAVNPLTESAKKEENRAKTRKKSVCFRENRDVVA- 124

Query: 121 KDLRVQNDVVEPHTPVIRPRLLKSKNAG--TPYHTAEKCSNCRFDKMETSSYWVAQIKLA 180
                     EP TPV  P L K + +G  TP+H+AEKCS CRFD++ETSSYW++QIKLA
Sbjct: 125 --------AAEPKTPVKSPVLAKPRLSGSTTPFHSAEKCSKCRFDRLETSSYWLSQIKLA 184

Query: 181 ESAGKHFVSADFFRLAYICNAEPIRNLRVELKRYLTRHEHLSMNTEWKDVSFSYGLIQDD 240
           E+ GKH VSA FFRLA+   AEP RN+ +ELKRYL RH+HLS   EW+ V FSYGL++D+
Sbjct: 185 ENVGKHSVSAAFFRLAFDTKAEPFRNILLELKRYLRRHKHLSEGKEWEKVCFSYGLLKDE 244

Query: 241 DNGGPKNPSTEICGSEINKDHQIAAMESGTPEISSSKLDKDEIVG 280
            N   K  ++     EI  +  I   E    E+    L+ DE  G
Sbjct: 245 SNSEDKIGNSS-KNKEIELECTIVEKEKEEEELKWLNLEVDEEYG 278

[Close]

BLAST of CmaCh20G004760 vs. NCBI nr
Match: gi|225435267|ref|XP_002282208.1| (PREDICTED: uncharacterized protein LOC100246731 isoform X1 [Vitis vinifera])

HSP 1 Score: 193.7 bits (491), Expect = 4.6e-46
Identity = 114/236 (48.31%), Postives = 144/236 (61.02%), Query Frame = 1


Query: 1   MDPKLTQIPAKSLSSKPKFIRKPSYEAPKITAYQPPISRQKRVFGTVRSSNIPIKPVNEN 60
           MD   TQ   K  S K +   K   E  K  +  PPI+R+KR FGT RS+NIP K   E 
Sbjct: 1   MDLHSTQFAGKVQSLKSRTAGKNVREE-KNNSKDPPIAREKRAFGTSRSTNIPAKTETEK 60

Query: 61  PLGKPLIGAIKKQPKSTRLPQIAVNVTADQKINEKLNPRPKKKSPSIKQQVTETALKDLR 120
           P  KP  GA +KQ KS+R          ++K+ EK   R KK S   +++V E+  K   
Sbjct: 61  PAIKPTTGATQKQSKSSRA------TAEEKKLPEKNKARLKKNSVCFQEKVAESPAKQ-- 120

Query: 121 VQNDVVEPHTPVIRPRLLKSKNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESAGKH 180
                  P TP  +P++       TPYHTAE CS CRFD++ET++YW+AQIKL+ES GKH
Sbjct: 121 ---HADGPRTPAAKPKV------STPYHTAENCSKCRFDRLETATYWLAQIKLSESVGKH 180

Query: 181 FVSADFFRLAYICNAEPIRNLRVELKRYLTRHEHLSMNTEWKDVSFSYGLIQDDDN 237
           FVSA FFRLA  C AEPIRN+R ELKRYL RH HL  + EWKDV+ SYGLI+++ +
Sbjct: 181 FVSAAFFRLALECKAEPIRNIRNELKRYLGRHGHLLGSNEWKDVNESYGLIENESS 218

The following BLAST results are available for this feature:

BLAST of CmaCh20G004760 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh20G004760 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCP5_CUCSA	1.7e-124	78.48	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G292420 PE=4 SV=1	[more]
K4DA77_SOLLC	1.7e-47	44.33	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
M1AE58_SOLTU	3.8e-47	44.21	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400008064 PE=4 SV=1	[more]
F6GTZ3_VITVI	3.2e-46	48.31	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g03110 PE=4 SV=...	[more]
A0A068UG23_COFCA	3.6e-45	42.71	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024268001 PE=4 SV=1	[more]

BLAST of CmaCh20G004760 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G62550.1	1.7e-09	26.92	unknown protein	[more]

BLAST of CmaCh20G004760 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659127863\|ref\|XP_008463928.1\|	7.7e-126	79.14	PREDICTED: uncharacterized protein LOC103501937 [Cucumis melo]	[more]
gi\|449463649\|ref\|XP_004149544.1\|	2.5e-124	78.48	PREDICTED: uncharacterized protein LOC101212258 [Cucumis sativus]	[more]
gi\|723745743\|ref\|XP_004251399.2\|	2.5e-47	44.33	PREDICTED: uncharacterized protein LOC101249148 isoform X1 [Solanum lycopersicum...	[more]
gi\|971538461\|ref\|XP_006340146.2\|	5.5e-47	44.21	PREDICTED: uncharacterized protein LOC102602435 [Solanum tuberosum]	[more]
gi\|225435267\|ref\|XP_002282208.1\|	4.6e-46	48.31	PREDICTED: uncharacterized protein LOC100246731 isoform X1 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G004760.1	CmaCh20G004760.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34468	FAMILY NOT NAMED	coord: 97..236 score: 9.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh20G004760	Cucsa.052870	Cucumber (Gy14) v1	cgycmaB0059
CmaCh20G004760	Cla000558	Watermelon (97103) v1	cmawmB524
CmaCh20G004760	Csa6G292420	Cucumber (Chinese Long) v2	cmacuB557
CmaCh20G004760	ClCG02G021040	Watermelon (Charleston Gray)	cmawcgB481
CmaCh20G004760	CSPI06G16340	Wild cucumber (PI 183967)	cmacpiB563
CmaCh20G004760	CmoCh02G008820	Cucurbita moschata (Rifu)	cmacmoB553
CmaCh20G004760	CmoCh20G005100	Cucurbita moschata (Rifu)	cmacmoB550
CmaCh20G004760	Lsi10G012820	Bottle gourd (USVL1VR-Ls)	cmalsiB506
CmaCh20G004760	Cp4.1LG16g05290	Cucurbita pepo (Zucchini)	cmacpeB564
CmaCh20G004760	Cp4.1LG05g08300	Cucurbita pepo (Zucchini)	cmacpeB587
CmaCh20G004760	CsaV3_6G021730	Cucumber (Chinese Long) v3	cmacucB0669
CmaCh20G004760	Cla97C02G047060	Watermelon (97103) v2	cmawmbB568
CmaCh20G004760	Bhi10G000465	Wax gourd	cmawgoB0692
CmaCh20G004760	CsGy6G015860	Cucumber (Gy14) v2	cgybcmaB793
CmaCh20G004760	Carg22592	Silver-seed gourd	carcmaB0303
CmaCh20G004760	Carg03249	Silver-seed gourd	carcmaB0473

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh20G004760	CmaCh02G008820	Cucurbita maxima (Rimu)	cmacmaB468

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh20G004760	Cucurbita maxima (Rimu)	cmacmaB261
CmaCh20G004760	Cucurbita maxima (Rimu)	cmacmaB490
CmaCh20G004760	Cucumber (Gy14) v1	cgycmaB0057
CmaCh20G004760	Cucumber (Gy14) v1	cgycmaB0842
CmaCh20G004760	Cucurbita moschata (Rifu)	cmacmoB544
CmaCh20G004760	Cucurbita moschata (Rifu)	cmacmoB569
CmaCh20G004760	Wild cucumber (PI 183967)	cmacpiB551
CmaCh20G004760	Cucumber (Chinese Long) v2	cmacuB547
CmaCh20G004760	Melon (DHL92) v3.5.1	cmameB489
CmaCh20G004760	Melon (DHL92) v3.5.1	cmameB520
CmaCh20G004760	Watermelon (Charleston Gray)	cmawcgB476
CmaCh20G004760	Watermelon (97103) v1	cmawmB513
CmaCh20G004760	Bottle gourd (USVL1VR-Ls)	cmalsiB518
CmaCh20G004760	Bottle gourd (USVL1VR-Ls)	cmalsiB520
CmaCh20G004760	Bottle gourd (USVL1VR-Ls)	cmalsiB524
CmaCh20G004760	Cucumber (Gy14) v2	cgybcmaB388
CmaCh20G004760	Cucumber (Gy14) v2	cgybcmaB790
CmaCh20G004760	Melon (DHL92) v3.6.1	cmamedB568
CmaCh20G004760	Melon (DHL92) v3.6.1	cmamedB597
CmaCh20G004760	Cucumber (Chinese Long) v3	cmacucB0649
CmaCh20G004760	Cucumber (Chinese Long) v3	cmacucB0656
CmaCh20G004760	Watermelon (97103) v2	cmawmbB565
CmaCh20G004760	Watermelon (97103) v2	cmawmbB594
CmaCh20G004760	Wax gourd	cmawgoB0674