CmaCh20G001360 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh20G001360
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Nuclear transcription factor Y subunit C5
Location	Cma_Chr20 : 655561 .. 659452 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATTTACCCGCTCGAAGCACAAAAATTGTGTGTTTTTTCCCTCGTCAGTTTTCGCTTTGCTTCCCTGTTTCAACCTCAGAGCTTCTGGCTGTGGCGCTGCCGTGCGTCTCTCGCTAAGGTGTCGTGTTTCTTTGTTTCCGAGGCTAGGGTTTCTTTTTCTTCTCCTTCTTCTCCTTCTTCGTGGTTTATAGGGTTCCACTAACCTTCCTCGTATTCTACTCATTTCTGTGTTCCTTTCTTGTTCTTTCCTATCTTCCAGTGGCGTTTTGGTTCTTGAAGTTCTTCAACATCATGAAGAAGAAGCTCGATACCCGTTTTCCAGCTGTGAGCTCTCTTTTCTGTTGCTTTTTCCGACTGTCTTTCTTTTTATTTTTTCGCGCTATTTATCTCATACTGATTTGATTATTTGTCTTGAGTGCCACTGTTTGTGTATTATCTTTATAATTGGGCCGTCGAAATGTATGGTAGCAACAGTTTCCATTTTCGGCCATGGTGGGGTTGGGATTTCGACTTTTTGTTCCGACATGTTATTGTATGTTCTCTTGTTGAGGATGAAGTGTTAATTAGGTCATCATGTCTCATATGTGATGGAAGCAGTTTTGTTTATTTTTTCTTTTTTTTTTCCTCCTAAAGATGATGCCACTAAAACATTTTACTCTACGCACTGTTCCAGTAGTCAAAATATGTACAGTGGCGTCGCTTTAATGCGTTTGTTGCTTTGAGAAATAGTTTTATTGAAGGTAATGAACACGGAGAACAACTTGAATATGAAATTTCTCCATAAAATCTGTTGCAAAACGGGCATAGTTTGTTGGAGGAATTATGCCTATGGAAGATGTACCATATAGGTTTTACAGCTTGACTTTATGGTGTTATTTGCTTATTCATTTATCTTTTCAGAATCTTTGAAATCGTTGTTTTTTCAAATAACCCTTAACTTGACAAGATGTTTGAACAATTTTTTGAACAAGTGACAAAACTTGTTATTGAGTGCCTCGTAAAGATCCTAAAGGCAGTTCGTGAACAGACAATCCCGTAGTGAAGGATTCAGAAACTCCTGCCTCCTGCAGAGAATGCACCATTACAGGAGCAAATGAATGGAAATATCTTTGAACATGATCCAAGAAATTAACTCTCCCAAGTAAAACCTGCCACGCAAAGACCTTAATCATATTTGGAATTTTAGCTTTCCATAAAAGGAAAAAAAAAAAAAAAAAACAACTGAAGTCTCAAGAGCAGCCGTCAAAGTAGGTGGAAAGATAAAATGTGAACATAGGAATGACAGGGAACCCTGCTGGAAGGATCAGGGTCCAATCCTAACATCTCTTCTCAGAAAAATAAATAACACACGAACACGCTTGATTTGCACTACCGAAAGAATTCTTGTGCATCTGTTTGGTTATTTTTCACTCTCCTTGTGAGACACCAGGTTCCATGCCAATGTAGCATCACGCCATTACATTAGTTGATTTATGGTCTCCACAATCAGATGTCTTCTTTTATCACATTTGAATTAGCTTAATGGTTATTTTTATTCTGTAACTATTTGACCCTAGTTGTGATCTTTGATTATGAAAGATAATACAAATAATTTCTTTTCATTTTTCCTGTCGCCTCCAGTGAGTTTTCTTGTGTTCCTTATGCAGAATGATCCTTGTCTGTGGATTTGTGATGGTTCTTCAGGGTGTCTCTTGATTTTGTGTTGAAGTTGGAACTATCTGTCTTATTTGAATTTTGATATATCAACAAAATAGTTGTCTAGTCTATATCTCAGCGACTGCTTGCTGGTCGTCCCTCTATAGCATTGATAACCTGAGTATTCTGTAACATTTACAGGCTCGGATTAAGAAGATCATGCAGGCTGATGAAGACGTAGGGAAGATTGCTATGGCAGTCCCACTTTTAGTCTGTATGTACCAACTACCAAAAAATTTGATAATTCCCTAGTTGGAGATTGTTACTTGCTTAGGATTGTGCTAGGTATTCTAGAATATATTCAAATGTGAAATAAGAAAATTGGTGAAGATCACCATACAGGATATCAAGCCGTTTGAGAGGGCTGAAAACTCTTCTCACGATTGGTCCTTACCCAAAAAGATAATGATGTCTTTGCACGATCTCCTCCCATATATTCTTCATGACAAGCTACTAATTGAAAGCAGTTCAATCTCCCTAATTACCCTTCCTATCATAAACATACACAATTGGGGGCTGGGTTGTTTTTGTTTCTTCTCCAAAATGTTGTTTCTAGAATGTGCTCTAGTATGTTGATTATTCTGTTGTTTTTGCAGCAAAAGCTCTGGAACTATTTTTACAAGATTTATGTGACAGGACATATGAGATTACTCTGAAGAGGGGGGCTAAGACAATGAACTCTTTGCACTTGTTAGTAAACTCTTAATTATTGAATTTTGGACATTCCGACATTTTTTGTAAATAGGATGTACTTAAATCAACTATCAGTTTACCACTTCTCGATTATGCTATATTGATGTTCAATAGAAAGCCATTTACGGTTCTTTCAAGCCTCTAGGCTCCAGCCTCCAACTATAGATCTAATCTTATTGTTGAGAAAAATGAAATGAGTTTCCTCTTTTATTTCGTCTCAGTCTAAGTAAGTGCCATGAAGGAAAAAACAGTTAAATTTTATAGTTTTACCTCTGCTGTTGCCTACCACATTAATTTCTCACACATTCATTGAATTGACAGAAAACAATGCATACAGACGTTTAATGTTTTTGATTTCTTGAGGGATGTTGTTGGCAAGGTCCCTGATTTAGGTGCCTCTGATGCTGCGGAGGACCGTTGTATTTTGAAACGAAGGTTTGGAAAATAAATGTCTCTCTAGTTGGGTGTAGTGATATACGAGGTATTCATGTTTGAAAGTATTTGTGGTTTTTTTCTTTTTGGTCCAGGAAAGTTGAAGATGAAGATGGTGGTAATGATAGTGAAGAAGAGTCCAAAAGGAGTAAGACGGTAAGAATTATTTTCAAAACGCGTATTCGTGTATGTTGTACTTCAGAAAAACAAAACACGTATTCATGTATCTTGTACTTTGGATAAACAAAACCCATATAGCAATTATGAGATTGTGCTCATTTCATTGCGGTTTACCCCTGTTGCAGACAGAGGCTGGTCACAACATTAGTGGCCGAGGAAGGGGTAGAGGCAGAGGTAGAGGTCGTGGGCGTAGTAGTAGGCATTCGGAGAAGGATACAGCCATACATTCTGATAACTTTGAAGAAGATTTGGAAATTCCTAGTCATCCTGGCGACAACCTCGACAAAACTGTGGCAGACAACGGTGTAGCAGAAGCTCGAATGGAGAACGATAATATTCCTATTGACAAAGCTGTAGAACCATCAGTCCGAAACTTCGACTTGAACGTAAACTTGGACGAAGATGGGGACTTGACTTCAATTCCAGTGGCTGCTTCTACAGGTTCACCAGTAAAGCCCCCGACTGACTCGAAACACGACGAGTATCCTGGTTGGTCAGTGGCTGAAATGGAAAAGATGGTTATCGATCCAATTCAACTAGCGAATTTGAATAAGAGTATAGATGATGAGGAAGATTATGACGAAGAAGGTTAGTTATATAATGATCCTCTTTTTCTATGGATGAGCAATTTGATTCTTTTGCCGCTAATGAAATAGTTGAGGTAGGTGCAGGATAGTGTTGTTGTTCCAGAAGAAAATGTATAGTTGAGTTGATTGTAGAGCTTTTTCTGGAATCAAAGTCTGGTAGGTTCTTCTCGAGTGTTGTGTGCATGCTTGGAAAAGCAGCAAGGAAAGTCACCCACCAATGACTATCACTTGTTTGACTTAATTTAATTTTTCATTTCCACGTGCATTTACGCTTGTAAGAAGGACCTTCAAATAATTTCTTAG

mRNA sequence

AAAATTTACCCGCTCGAAGCACAAAAATTGTGTGTTTTTTCCCTCGTCAGTTTTCGCTTTGCTTCCCTGTTTCAACCTCAGAGCTTCTGGCTGTGGCGCTGCCGTGCGTCTCTCGCTAAGTGGCGTTTTGGTTCTTGAAGTTCTTCAACATCATGAAGAAGAAGCTCGATACCCGTTTTCCAGCTGCTCGGATTAAGAAGATCATGCAGGCTGATGAAGACGTAGGGAAGATTGCTATGGCAGTCCCACTTTTAGTCTCAAAAGCTCTGGAACTATTTTTACAAGATTTATGTGACAGGACATATGAGATTACTCTGAAGAGGGGGGCTAAGACAATGAACTCTTTGCACTTAAAACAATGCATACAGACGTTTAATGTTTTTGATTTCTTGAGGGATGTTGTTGGCAAGGTCCCTGATTTAGGTGCCTCTGATGCTGCGGAGGACCGTTGTATTTTGAAACGAAGGAAAGTTGAAGATGAAGATGGTGGTAATGATAGTGAAGAAGAGTCCAAAAGGAGTAAGACGACAGAGGCTGGTCACAACATTAGTGGCCGAGGAAGGGGTAGAGGCAGAGGTAGAGGTCGTGGGCGTAGTAGTAGGCATTCGGAGAAGGATACAGCCATACATTCTGATAACTTTGAAGAAGATTTGGAAATTCCTAGTCATCCTGGCGACAACCTCGACAAAACTGTGGCAGACAACGGTGTAGCAGAAGCTCGAATGGAGAACGATAATATTCCTATTGACAAAGCTGTAGAACCATCAGTCCGAAACTTCGACTTGAACGTAAACTTGGACGAAGATGGGGACTTGACTTCAATTCCAGTGGCTGCTTCTACAGGTTCACCAGTAAAGCCCCCGACTGACTCGAAACACGACGAGTATCCTGGTTGGTCAGTGGCTGAAATGGAAAAGATGGTTATCGATCCAATTCAACTAGCGAATTTGAATAAGAGTATAGATGATGAGGAAGATTATGACGAAGAAGGTTAGTTATATAATGATCCTCTTTTTCTATGGATGAGCAATTTGATTCTTTTGCCGCTAATGAAATAGTTGAGGTAGGTGCAGGATAGTGTTGTTGTTCCAGAAGAAAATGTATAGTTGAGTTGATTGTAGAGCTTTTTCTGGAATCAAAGTCTGGTAGGTTCTTCTCGAGTGTTGTGTGCATGCTTGGAAAAGCAGCAAGGAAAGTCACCCACCAATGACTATCACTTGTTTGACTTAATTTAATTTTTCATTTCCACGTGCATTTACGCTTGTAAGAAGGACCTTCAAATAATTTCTTAG

Coding sequence (CDS)

ATGAAGAAGAAGCTCGATACCCGTTTTCCAGCTGCTCGGATTAAGAAGATCATGCAGGCTGATGAAGACGTAGGGAAGATTGCTATGGCAGTCCCACTTTTAGTCTCAAAAGCTCTGGAACTATTTTTACAAGATTTATGTGACAGGACATATGAGATTACTCTGAAGAGGGGGGCTAAGACAATGAACTCTTTGCACTTAAAACAATGCATACAGACGTTTAATGTTTTTGATTTCTTGAGGGATGTTGTTGGCAAGGTCCCTGATTTAGGTGCCTCTGATGCTGCGGAGGACCGTTGTATTTTGAAACGAAGGAAAGTTGAAGATGAAGATGGTGGTAATGATAGTGAAGAAGAGTCCAAAAGGAGTAAGACGACAGAGGCTGGTCACAACATTAGTGGCCGAGGAAGGGGTAGAGGCAGAGGTAGAGGTCGTGGGCGTAGTAGTAGGCATTCGGAGAAGGATACAGCCATACATTCTGATAACTTTGAAGAAGATTTGGAAATTCCTAGTCATCCTGGCGACAACCTCGACAAAACTGTGGCAGACAACGGTGTAGCAGAAGCTCGAATGGAGAACGATAATATTCCTATTGACAAAGCTGTAGAACCATCAGTCCGAAACTTCGACTTGAACGTAAACTTGGACGAAGATGGGGACTTGACTTCAATTCCAGTGGCTGCTTCTACAGGTTCACCAGTAAAGCCCCCGACTGACTCGAAACACGACGAGTATCCTGGTTGGTCAGTGGCTGAAATGGAAAAGATGGTTATCGATCCAATTCAACTAGCGAATTTGAATAAGAGTATAGATGATGAGGAAGATTATGACGAAGAAGGTTAG

Protein sequence

MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAKTMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCILKRRKVEDEDGGNDSEEESKRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNFEEDLEIPSHPGDNLDKTVADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDLTSIPVAASTGSPVKPPTDSKHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEEG

Homology

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BLAST of CmaCh20G001360 vs. Swiss-Prot
Match: NC2A_DICDI (Dr1-associated corepressor homolog OS=Dictyostelium discoideum GN=drap1 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.5e-22
Identity = 60/121 (49.59%), Postives = 82/121 (67.77%), Query Frame = 1


Query: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60
           MKKK  T+FP ARIKKIMQ DE+VGKIA A P+L+S+ LELF+ DL  +T +IT  +  K
Sbjct: 1   MKKKYKTKFPMARIKKIMQKDEEVGKIASATPILISQCLELFMADLVMKTCKITQAKKGK 60

Query: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCILKRRKVEDEDGGNDSEEES 120
            ++  HLK+CI+  + FDFL ++V ++PD    D  E R   + +K E EDGG + EEE 
Sbjct: 61  VISVNHLKECIKQESTFDFLTEIVDRIPD----DKNEKRG--RPKKTEGEDGGEEEEEEE 115

Query: 121 K 122
           +
Sbjct: 121 E 115

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BLAST of CmaCh20G001360 vs. Swiss-Prot
Match: NC2A_BOVIN (Dr1-associated corepressor OS=Bos taurus GN=DRAP1 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 9.4e-22
Identity = 69/176 (39.20%), Postives = 98/176 (55.68%), Query Frame = 1


Query: 2   KKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAKT 61
           KKK + RFP ARIKKIMQ DE++GK+A AVP+++S+ALELFL+ L  +  ++T  R AKT
Sbjct: 5   KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKT 64

Query: 62  MNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCILKRRKVEDEDGGNDSEEESK 121
           M + HLKQCI+    FDFL+D+V  VPD+               + + ED   D ++  +
Sbjct: 65  MTTSHLKQCIELEQQFDFLKDLVASVPDM---------------QGDGEDNHMDGDKGPR 124

Query: 122 RS-KTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNFEEDLEIP---SHP 174
           R  K+  +G    G G      +  G  S   ++     SD  EE  ++P   SHP
Sbjct: 125 RGRKSGSSGRKNGGMGSKGKDKKLSGTDSEQEDESEDTDSDGEEETPQVPPQASHP 165

[Close]

BLAST of CmaCh20G001360 vs. Swiss-Prot
Match: NC2A_RAT (Dr1-associated corepressor OS=Rattus norvegicus GN=Drap1 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.7e-21
Identity = 68/176 (38.64%), Postives = 96/176 (54.55%), Query Frame = 1


Query: 2   KKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAKT 61
           KKK + RFP ARIKKIMQ DE++GK+A AVP+++S+ALELFL+ L  +  ++T  R AKT
Sbjct: 5   KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKT 64

Query: 62  MNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCILKRRKVEDEDGGNDSEEESK 121
           M + HLKQCI+    FDFL+D+V  VPD+               + + ED   D ++  +
Sbjct: 65  MTTSHLKQCIELEQQFDFLKDLVASVPDM---------------QGDGEDNHTDGDKGPR 124

Query: 122 RS-KTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNFEEDLEIP---SHP 174
           R  K   +G    G G      +  G  S   ++     +D  EE  + P   SHP
Sbjct: 125 RGRKPGSSGRKNGGTGSKSKDKKLSGTDSEQEDESEDTDTDGEEETPQAPPQASHP 165

[Close]

BLAST of CmaCh20G001360 vs. Swiss-Prot
Match: NC2A_MOUSE (Dr1-associated corepressor OS=Mus musculus GN=Drap1 PE=1 SV=3)

HSP 1 Score: 102.8 bits (255), Expect = 6.1e-21
Identity = 68/176 (38.64%), Postives = 97/176 (55.11%), Query Frame = 1


Query: 2   KKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAKT 61
           KKK + RFP ARIKKIMQ DE++GK+A AVP+++S+ALELFL+ L  +  ++T  R AKT
Sbjct: 5   KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKT 64

Query: 62  MNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCILKRRKVEDEDGGNDSEEESK 121
           M + HLKQCI+    FDFL+D+V  VPD+               + + ED   D ++  +
Sbjct: 65  MTTSHLKQCIELEQQFDFLKDLVASVPDM---------------QGDGEDNHVDGDKGPR 124

Query: 122 RS-KTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNFEEDLEIP---SHP 174
           R  K   +G    G G      +  G  S   ++     +D  EE  ++P   SHP
Sbjct: 125 RGRKPGSSGRKNGGTGSKGKDKKLSGTDSEQEDESEDTDTDGEEETPQLPPQASHP 165

[Close]

BLAST of CmaCh20G001360 vs. Swiss-Prot
Match: NC2A_HUMAN (Dr1-associated corepressor OS=Homo sapiens GN=DRAP1 PE=1 SV=3)

HSP 1 Score: 102.4 bits (254), Expect = 8.0e-21
Identity = 68/176 (38.64%), Postives = 96/176 (54.55%), Query Frame = 1


Query: 2   KKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAKT 61
           KKK + RFP ARIKKIMQ DE++GK+A AVP+++S+ALELFL+ L  +  ++T  R AKT
Sbjct: 5   KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKT 64

Query: 62  MNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCILKRRKVEDEDGGNDSEEESK 121
           M + HLKQCI+    FDFL+D+V  VPD+               + + ED   D ++ ++
Sbjct: 65  MTTSHLKQCIELEQQFDFLKDLVASVPDM---------------QGDGEDNHMDGDKGAR 124

Query: 122 RS-KTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNFEEDLEIP---SHP 174
           R  K    G    G G      +  G  S   ++     +D  EE  + P   SHP
Sbjct: 125 RGRKPGSGGRKNGGMGTKSKDKKLSGTDSEQEDESEDTDTDGEEETSQPPPQASHP 165

[Close]

BLAST of CmaCh20G001360 vs. TrEMBL
Match: A0A0A0KI73_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G426970 PE=4 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 2.7e-132
Identity = 248/280 (88.57%), Postives = 261/280 (93.21%), Query Frame = 1


Query: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60
           MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQ+LC+RTYEITLKRGA+
Sbjct: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQNLCNRTYEITLKRGAR 60

Query: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCILKRRKVEDEDGGNDSEEES 120
           T+NSLHLKQCIQTFNVFDFLRDVVGKVPDLG SDA EDR I KRRKV DEDGGNDS+EES
Sbjct: 61  TLNSLHLKQCIQTFNVFDFLRDVVGKVPDLGGSDAVEDRHISKRRKVADEDGGNDSDEES 120

Query: 121 KRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNFEEDLEIPSHPGDNLDKT 180
           KRSK TEAGH ISGRGRGRGRGRGRGRSSRH EKDTAIH DNFE+DLEIP H  D+L KT
Sbjct: 121 KRSKMTEAGHCISGRGRGRGRGRGRGRSSRHLEKDTAIHYDNFEDDLEIPDHLDDDLHKT 180

Query: 181 VADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDLTSIPVAASTGSPVKPPTDS 240
             DNGVAEAR+ENDN  +DKA+EPSVRNFDLNVNLDEDGD TSIPVAASTGSPVKPPTDS
Sbjct: 181 EPDNGVAEARVENDNTLVDKALEPSVRNFDLNVNLDEDGDSTSIPVAASTGSPVKPPTDS 240

Query: 241 KHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEEG 281
           KHDEYPGWSVAEMEKM IDPIQLAN+N++IDDEEDYDEEG
Sbjct: 241 KHDEYPGWSVAEMEKMAIDPIQLANINETIDDEEDYDEEG 280

[Close]

BLAST of CmaCh20G001360 vs. TrEMBL
Match: D7T1D7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g02120 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 9.9e-87
Identity = 192/302 (63.58%), Postives = 225/302 (74.50%), Query Frame = 1


Query: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60
           M+KKLDTRFPA+RIKKIMQADEDVGKIA+AVPLLVSKALELFLQDLCDRTY+ITL+RGAK
Sbjct: 1   MRKKLDTRFPASRIKKIMQADEDVGKIALAVPLLVSKALELFLQDLCDRTYQITLERGAK 60

Query: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDA-AEDRCILKRRKVEDEDGGNDSEEE 120
           TM+SLHLKQC+Q FNVFDFLR++V KVPDLG SDA  EDR   KRRKV D D GNDS+EE
Sbjct: 61  TMSSLHLKQCVQRFNVFDFLREIVSKVPDLGCSDAGGEDRSASKRRKVVD-DEGNDSDEE 120

Query: 121 SKRSKTTEAGHNI-------SGRGRGRGRGRGRGRSSRHSEKDTAIHSDNFEEDLEI-PS 180
           SKRS+  E GH +       SGRGRGRGRGRGRGR SR  E+DT   S+  E+D ++  +
Sbjct: 121 SKRSRMHETGHTVGSGSGSGSGRGRGRGRGRGRGRGSRTIERDTIAESEKPEDDTDMHTN 180

Query: 181 HPGDNLDKTVADNGV-AEARMEN---------DNIPIDKAVEPSVRNFDLNVNLDEDGDL 240
           +   + +    DNG   E   EN         +NI + K  +  VRNFDLNV+LDE+GD 
Sbjct: 181 NDNQSQNPETRDNGAEPEESKENISVVKNESKENISVGKNADSCVRNFDLNVDLDENGDS 240

Query: 241 TSIPVAASTGSPVKPP---TDSKHDEYPGWSVAEMEKMVIDPIQLANLNKSID-DEEDYD 280
           TSI  AA   +PV P    T+ KH+EYPGWS+++MEKM IDPIQLANLN+ ID DEEDYD
Sbjct: 241 TSILPAAPAPAPVTPSPKLTEMKHEEYPGWSLSDMEKMEIDPIQLANLNRRIDEDEEDYD 300

[Close]

BLAST of CmaCh20G001360 vs. TrEMBL
Match: W9S4H1_9ROSA (Dr1-associated corepressor OS=Morus notabilis GN=L484_004719 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 3.3e-82
Identity = 176/277 (63.54%), Postives = 205/277 (74.01%), Query Frame = 1


Query: 9   FPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAKTMNSLHLK 68
           F  ARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLC RTY+ITLKRGAKTMNSLHLK
Sbjct: 96  FLQARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCHRTYDITLKRGAKTMNSLHLK 155

Query: 69  QCIQTFNVFDFLRDVVGKVPDLGASDAA-EDRCILKRRKVEDEDGGNDSEEESKRSKTTE 128
           QC+ TFNVFDFL+D V KVPDLG SDAA EDR + KRRK  D +  NDS+EESKR+K  E
Sbjct: 156 QCVHTFNVFDFLKDAVSKVPDLGGSDAAGEDRSVTKRRKFVDSE-DNDSDEESKRNKMHE 215

Query: 129 AGH---NISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNFEEDLEIPSHPGDNLDKTVADN 188
           AGH   + SGRGRGRGRGRGRGR SR  E++TA H D FE+D +I  H   N       +
Sbjct: 216 AGHVSGSGSGRGRGRGRGRGRGRGSRMVERETATHHDKFEDDADISKHNEFNDQTPETPD 275

Query: 189 GVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDLTSIPVAASTGSPVKPPTDSKHDE 248
              E     +NI   +  E  +RNFDLNV LD+ GD TS+  AA T S  +   + KH+E
Sbjct: 276 HREEPEGPKENIAGQRNAEAPIRNFDLNVRLDDTGDSTSLSAAAPTSSSAQLTPEMKHEE 335

Query: 249 YPGWSVAEMEKMVIDPIQLANLNKSID-DEEDYDEEG 281
           YPGWS+A+++ M IDP+QLANLN+ +D D+EDYDEEG
Sbjct: 336 YPGWSLADVDNMSIDPLQLANLNRRLDEDDEDYDEEG 371

[Close]

BLAST of CmaCh20G001360 vs. TrEMBL
Match: A0A068UMH5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00030141001 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 7.4e-82
Identity = 175/289 (60.55%), Postives = 215/289 (74.39%), Query Frame = 1


Query: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60
           M+KKLDTRFPA+RIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITL+RGAK
Sbjct: 1   MRKKLDTRFPASRIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLRRGAK 60

Query: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAA-EDRCILKRRKVEDEDGGNDSEEE 120
           T+NSLHLKQC+Q+FNVFDFLRD+V +VPDLG S+AA E     KR+ +EDE  GNDS+ E
Sbjct: 61  TVNSLHLKQCVQSFNVFDFLRDIVSRVPDLGGSEAAAEGSSARKRKAIEDE--GNDSDNE 120

Query: 121 SKRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNFEEDLEIPSHPGDNLDK 180
           +K+S  +E GH  SGRGRGRGRGRGRGR++R  EK++    + +E+DL+I    GD    
Sbjct: 121 AKKSHVSETGHT-SGRGRGRGRGRGRGRANRTLEKESISQCEKYEDDLDISLQNGDKKSI 180

Query: 181 TVADNGVAEARMENDNIPIDKAV-------EPSVRNFDLNVNLDEDGDLTSIPVAASTGS 240
            +        RM+N   P D  +       E  VRNFDLNV+L+E+ D  +IP    + S
Sbjct: 181 NIK-------RMDNGANPDDTKISLVAQNAEAPVRNFDLNVDLNENADSGAIPAGTPSTS 240

Query: 241 PVKPPTDSKHDEYPGWSVAEMEKMVIDPIQLANLNKSI-DDEEDYDEEG 281
             KPP + + +EYPGWS+A+ME M IDP+QLA LN+ I ++EEDYDEEG
Sbjct: 241 SAKPPMEVRPEEYPGWSLADMESMAIDPVQLAKLNQRIEEEEEDYDEEG 279

[Close]

BLAST of CmaCh20G001360 vs. TrEMBL
Match: A0A124SBS1_CYNCS (Histone-fold OS=Cynara cardunculus var. scolymus GN=Ccrd_006455 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 4.8e-81
Identity = 184/289 (63.67%), Postives = 218/289 (75.43%), Query Frame = 1


Query: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60
           M+KKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITL+RGAK
Sbjct: 86  MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLQRGAK 145

Query: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAA-EDRCILKRRKVEDEDGGNDSEEE 120
           T+NS+HLKQC+Q+FNVFDFLR++VGKVPDLG SDAA E+R   KRRKV D+D  ND +E+
Sbjct: 146 TLNSMHLKQCVQSFNVFDFLREIVGKVPDLGGSDAAGEERSATKRRKVADDD-HNDGDED 205

Query: 121 SKRSKTTEAGH-NISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNFEEDLEIPSHPGD-NL 180
            KR K  E  + N SGRGRGRGRGRGRGR SR  ++  A  + N+E+        GD N 
Sbjct: 206 LKRDKPPETVYANGSGRGRGRGRGRGRGRISRAEKEANAAAASNYEK------QEGDTNK 265

Query: 181 DKTVADNGVAEARMENDNIPIDKAVEPSV--RNFDLNVNLDEDGDLTSIPVAAST--GSP 240
            K + D+       EN NI      E  V  R+FDLN++LDE+GD  +I +A  T  GS 
Sbjct: 266 QKPILDSVEDADSKENHNISATGKTEDQVKIRSFDLNLDLDENGDTPAISMAPVTPSGSS 325

Query: 241 VKPPT-DSKHDEYPGWSVAEMEKMVIDPIQLANLNKSID-DEEDYDEEG 281
           +KPPT + K DE+PGWS+A++EKM IDP+QLANLN  ID D+EDYDEEG
Sbjct: 326 LKPPTIEMKPDEFPGWSLADVEKMAIDPVQLANLNSRIDEDDEDYDEEG 367

[Close]

BLAST of CmaCh20G001360 vs. TAIR10
Match: AT3G12480.1 (AT3G12480.1 nuclear factor Y, subunit C11)

HSP 1 Score: 229.6 bits (584), Expect = 2.4e-60
Identity = 157/313 (50.16%), Postives = 193/313 (61.66%), Query Frame = 1


Query: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60
           M+KKLDTRFPAARIKKIMQADEDVGKIA+AVP+LVSK+LELFLQDLCDRTYEITL+RGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKSLELFLQDLCDRTYEITLERGAK 60

Query: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASD-------AAEDRCILKRRK-VEDEDG 120
           T++SLHLK C++ +NVFDFLR+VV KVPD G S          +DR I KRRK + DE  
Sbjct: 61  TVSSLHLKHCVERYNVFDFLREVVSKVPDYGHSQGQGHGDVTMDDRSISKRRKPISDE-- 120

Query: 121 GNDSEEESKRSKTTEAGH-NISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNFEEDLEIPS 180
            NDS+EE K+SKT E G    SGRG GRGRGRGRGR  R ++   A   +    ++E+ +
Sbjct: 121 VNDSDEEYKKSKTQEIGSAKTSGRG-GRGRGRGRGRGGRAAK---AAEREGLNREMEVEA 180

Query: 181 ------HPGDN-----------------LDKTVADNGVAEARMENDNIPIDKAVEPSVRN 240
                  P DN                 +D T A N   +  +++    ID         
Sbjct: 181 ANSGQPPPEDNVKMHASESSPQEDEKKGIDGTAASNEDTKQHLQSPKEGID--------- 240

Query: 241 FDLNVNLDEDGDLTSIPVAASTGSPVKPPTDSKHDEYPGWSVAEMEKMVIDPIQLANLNK 281
           FDLN    E  DL    +A +TG+       +  +EY GW + ++ KM  DP QLA+L K
Sbjct: 241 FDLNA---ESLDLNETKLAPATGTTTTTTAATDSEEYSGWPMMDISKM--DPAQLASLGK 293

[Close]

BLAST of CmaCh20G001360 vs. TAIR10
Match: AT5G19490.1 (AT5G19490.1 Histone superfamily protein)

HSP 1 Score: 209.5 bits (532), Expect = 2.6e-54
Identity = 143/283 (50.53%), Postives = 171/283 (60.42%), Query Frame = 1


Query: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60
           MKKKL TRFPA RIKKIMQ DE+VGKIAMAVPLLVSKALELFLQDLC+ TY++TL RGAK
Sbjct: 1   MKKKLQTRFPATRIKKIMQTDEEVGKIAMAVPLLVSKALELFLQDLCNHTYDVTLSRGAK 60

Query: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCILKRRKVEDEDGGNDSEEES 120
           T+N+ HLKQC+Q  NVFDFLRD V KVPDLG SD  ED+   KRRKV D    ND E+  
Sbjct: 61  TVNAFHLKQCVQATNVFDFLRDTVAKVPDLGGSD-TEDQSATKRRKVVDGSSCND-EDMI 120

Query: 121 KRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNFEEDLEIPSHPGDNL--- 180
           K ++  E  H   GRGR   RGRGRGRSS  +    ++    FEEDLE  S         
Sbjct: 121 KTTQMHEVKHTSCGRGR---RGRGRGRSSGRTGSGLSL---KFEEDLEDGSPESSRTPSP 180

Query: 181 -DKTVADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDLTSIPVAASTGSPVKP 240
            + +++ +  +  ++ + N       E  VRNFDLNV LDE+GD  +        SP   
Sbjct: 181 ENGSLSHDDTSWKKVASHNNHHSSNSEVKVRNFDLNVELDENGDNATWLETQLERSP--- 240

Query: 241 PTDSKHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEE 280
                  +YP     E+ +M IDP        S  DEEDYDEE
Sbjct: 241 -------DYP----LEINEMKIDPDD--QQQASASDEEDYDEE 259

[Close]

BLAST of CmaCh20G001360 vs. TAIR10
Match: AT5G63470.1 (AT5G63470.1 nuclear factor Y, subunit C4)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-09
Identity = 34/89 (38.20%), Postives = 51/89 (57.30%), Query Frame = 1


Query: 8   RFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAKTMNSLHL 67
           + P ARIKKIM+ADEDV  I+   P+L +KA ELF+ +L  R++    +   +T+    +
Sbjct: 78  QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 137

Query: 68  KQCIQTFNVFDFLRDVVGKVPDLGASDAA 97
              I   ++FDFL D+V +       DAA
Sbjct: 138 AAAITRTDIFDFLVDIVPREEIKEEEDAA 166

[Close]

BLAST of CmaCh20G001360 vs. TAIR10
Match: AT3G48590.1 (AT3G48590.1 nuclear factor Y, subunit C1)

HSP 1 Score: 58.9 bits (141), Expect = 5.7e-09
Identity = 31/77 (40.26%), Postives = 47/77 (61.04%), Query Frame = 1


Query: 8   RFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAKTMNSLHL 67
           + P ARIKKIM+ADEDV  I+   P+L +KA ELF+ +L  R++    +   +T+    +
Sbjct: 65  QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 124

Query: 68  KQCIQTFNVFDFLRDVV 85
              I   ++FDFL D+V
Sbjct: 125 AAAITRTDIFDFLVDIV 141

[Close]

BLAST of CmaCh20G001360 vs. TAIR10
Match: AT5G50490.1 (AT5G50490.1 nuclear factor Y, subunit C5)

HSP 1 Score: 58.9 bits (141), Expect = 5.7e-09
Identity = 35/93 (37.63%), Postives = 51/93 (54.84%), Query Frame = 1


Query: 9   FPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAKTMNSLHLK 68
           FP +RIK+IM+ D DV  IA   P L+SKA E+F+ DL  R++    +    T+    + 
Sbjct: 37  FPISRIKRIMKFDPDVSMIAAEAPNLLSKACEMFVMDLTMRSWLHAQESNRLTIRKSDVD 96

Query: 69  QCIQTFNVFDFLRDVVGK---VPDLGASDAAED 99
             +    +FDFLRD V K    P + A+D  +D
Sbjct: 97  AVVSQTVIFDFLRDDVPKDEGEPVVAAADPVDD 129

[Close]

BLAST of CmaCh20G001360 vs. NCBI nr
Match: gi|659097410|ref|XP_008449610.1| (PREDICTED: dr1-associated corepressor-like isoform X1 [Cucumis melo])

HSP 1 Score: 480.3 bits (1235), Expect = 2.2e-132
Identity = 247/280 (88.21%), Postives = 262/280 (93.57%), Query Frame = 1


Query: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60
           MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQ+LCDRTYEITLKRGA+
Sbjct: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQNLCDRTYEITLKRGAR 60

Query: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCILKRRKVEDEDGGNDSEEES 120
           TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLG SDAAEDR I KRRKV DED GNDS+EES
Sbjct: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGGSDAAEDRHISKRRKVADEDVGNDSDEES 120

Query: 121 KRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNFEEDLEIPSHPGDNLDKT 180
           KRSK TEAGH ISGRGRGRGRGRGRGRSSRH EKDTAIH +NFE+DLEIP+HP D+L KT
Sbjct: 121 KRSKVTEAGHCISGRGRGRGRGRGRGRSSRHLEKDTAIHYNNFEDDLEIPNHPDDDLHKT 180

Query: 181 VADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDLTSIPVAASTGSPVKPPTDS 240
             DNGVAEAR+ENDN  +DKA+EPSVRNFDLNVNLDEDGD TS+PV ASTGSPVKPPTDS
Sbjct: 181 EPDNGVAEARVENDNTLVDKALEPSVRNFDLNVNLDEDGDSTSVPVVASTGSPVKPPTDS 240

Query: 241 KHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEEG 281
           KHDEYPGWSVAEMEKM IDPIQLAN+N++IDDEEDYDE+G
Sbjct: 241 KHDEYPGWSVAEMEKMAIDPIQLANMNETIDDEEDYDEDG 280

[Close]

BLAST of CmaCh20G001360 vs. NCBI nr
Match: gi|449445015|ref|XP_004140269.1| (PREDICTED: dr1-associated corepressor-like [Cucumis sativus])

HSP 1 Score: 479.6 bits (1233), Expect = 3.8e-132
Identity = 248/280 (88.57%), Postives = 261/280 (93.21%), Query Frame = 1


Query: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60
           MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQ+LC+RTYEITLKRGA+
Sbjct: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQNLCNRTYEITLKRGAR 60

Query: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCILKRRKVEDEDGGNDSEEES 120
           T+NSLHLKQCIQTFNVFDFLRDVVGKVPDLG SDA EDR I KRRKV DEDGGNDS+EES
Sbjct: 61  TLNSLHLKQCIQTFNVFDFLRDVVGKVPDLGGSDAVEDRHISKRRKVADEDGGNDSDEES 120

Query: 121 KRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNFEEDLEIPSHPGDNLDKT 180
           KRSK TEAGH ISGRGRGRGRGRGRGRSSRH EKDTAIH DNFE+DLEIP H  D+L KT
Sbjct: 121 KRSKMTEAGHCISGRGRGRGRGRGRGRSSRHLEKDTAIHYDNFEDDLEIPDHLDDDLHKT 180

Query: 181 VADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDLTSIPVAASTGSPVKPPTDS 240
             DNGVAEAR+ENDN  +DKA+EPSVRNFDLNVNLDEDGD TSIPVAASTGSPVKPPTDS
Sbjct: 181 EPDNGVAEARVENDNTLVDKALEPSVRNFDLNVNLDEDGDSTSIPVAASTGSPVKPPTDS 240

Query: 241 KHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEEG 281
           KHDEYPGWSVAEMEKM IDPIQLAN+N++IDDEEDYDEEG
Sbjct: 241 KHDEYPGWSVAEMEKMAIDPIQLANINETIDDEEDYDEEG 280

[Close]

BLAST of CmaCh20G001360 vs. NCBI nr
Match: gi|659097412|ref|XP_008449611.1| (PREDICTED: dr1-associated corepressor-like isoform X2 [Cucumis melo])

HSP 1 Score: 475.7 bits (1223), Expect = 5.5e-131
Identity = 247/280 (88.21%), Postives = 262/280 (93.57%), Query Frame = 1


Query: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60
           MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQ+LCDRTYEITLKRGA+
Sbjct: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQNLCDRTYEITLKRGAR 60

Query: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCILKRRKVEDEDGGNDSEEES 120
           TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLG SDAAEDR I KRRKV DED GNDS+EES
Sbjct: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGGSDAAEDRHISKRRKVADEDVGNDSDEES 120

Query: 121 KRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNFEEDLEIPSHPGDNLDKT 180
           KRSKT EAGH ISGRGRGRGRGRGRGRSSRH EKDTAIH +NFE+DLEIP+HP D+L KT
Sbjct: 121 KRSKT-EAGHCISGRGRGRGRGRGRGRSSRHLEKDTAIHYNNFEDDLEIPNHPDDDLHKT 180

Query: 181 VADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDLTSIPVAASTGSPVKPPTDS 240
             DNGVAEAR+ENDN  +DKA+EPSVRNFDLNVNLDEDGD TS+PV ASTGSPVKPPTDS
Sbjct: 181 EPDNGVAEARVENDNTLVDKALEPSVRNFDLNVNLDEDGDSTSVPVVASTGSPVKPPTDS 240

Query: 241 KHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEEG 281
           KHDEYPGWSVAEMEKM IDPIQLAN+N++IDDEEDYDE+G
Sbjct: 241 KHDEYPGWSVAEMEKMAIDPIQLANMNETIDDEEDYDEDG 279

[Close]

BLAST of CmaCh20G001360 vs. NCBI nr
Match: gi|1009161216|ref|XP_015898777.1| (PREDICTED: dr1-associated corepressor homolog [Ziziphus jujuba])

HSP 1 Score: 344.0 bits (881), Expect = 2.5e-91
Identity = 197/296 (66.55%), Postives = 232/296 (78.38%), Query Frame = 1


Query: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60
           M+KKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60

Query: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASD-AAEDRCILKRRKVEDEDGGNDSEEE 120
           TMNSLHLKQC+QTF+VFDFLR +V KVPDLG SD A EDR  +KRRKV D D  NDSEE+
Sbjct: 61  TMNSLHLKQCVQTFSVFDFLRHIVKKVPDLGGSDTAGEDRSTVKRRKVVD-DEDNDSEED 120

Query: 121 SKRSKTTEAGH-NISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNFEEDLEIPSHPGDNLD 180
           SKR+K  EAG    SGRGRGRGRGRGRGRSSR  E++TA+H + FE+D++IP   GD  D
Sbjct: 121 SKRTKMIEAGQITGSGRGRGRGRGRGRGRSSRLIERETALHDEKFEDDVDIPK-DGDKND 180

Query: 181 KTV--ADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDLTSIPVAA-------- 240
           +++   D+      ++ +N+ +DK  EPSVRNFDLNV+L+E+GD T++  AA        
Sbjct: 181 QSLESPDDATEHEGLKKENMSVDKDSEPSVRNFDLNVDLNENGDSTNLSAAAPASLATEV 240

Query: 241 STGSPVKPPT----DSKHDEYPGWSVAEMEKMVIDPIQLANLNKSID-DEEDYDEE 280
           ST  P    T    + KH+EYPGWS+A++E M IDPIQLANLN++ID DEEDYDEE
Sbjct: 241 STAVPASSATQTTPEMKHEEYPGWSLADVENMAIDPIQLANLNRNIDEDEEDYDEE 294

[Close]

BLAST of CmaCh20G001360 vs. NCBI nr
Match: gi|702474902|ref|XP_010031686.1| (PREDICTED: dr1-associated corepressor-like [Eucalyptus grandis])

HSP 1 Score: 335.1 bits (858), Expect = 1.2e-88
Identity = 183/283 (64.66%), Postives = 216/283 (76.33%), Query Frame = 1


Query: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60
           M+KKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTY+ITLKRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYDITLKRGAK 60

Query: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASD-AAEDRCILKRRKVEDEDGGNDSEEE 120
           T+NSLHLKQC+QTFNVFDFL ++V KVPDLG SD A +DR   KRRK+ D DG ND+++E
Sbjct: 61  TLNSLHLKQCVQTFNVFDFLSEIVSKVPDLGGSDTAGDDRSAAKRRKMVD-DGENDTDDE 120

Query: 121 SKRSKTTEAGHNIS-GRGRGRGRGRGRGRSSRHSEKDTAIHSDNFEEDLEIPSHPGDNLD 180
           SKRS+  + GH  S GRG+GRGRGRGRGR  R SE D  + ++ FE D ++P     N D
Sbjct: 121 SKRSRMNDTGHTGSAGRGKGRGRGRGRGRGGRASEGDATVQNEKFEVDGDVPQQDNLNQD 180

Query: 181 KTVADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDLTSIPVAASTGSPVKPPT 240
               +NG        D+IP  ++ EP VRNFDLNV+LDE+GD  SI  +  T     P  
Sbjct: 181 LEGTENG-DHLNESKDSIPTPRSAEPPVRNFDLNVDLDENGDSKSILASGPTSISAAPDA 240

Query: 241 DSKHDEYPGWSVAEMEKMVIDPIQLANLNKSID-DEEDYDEEG 281
             KH+EYPGWS++E+EKM IDPIQLANLN+ +D D+EDYDEEG
Sbjct: 241 GFKHEEYPGWSLSEVEKMAIDPIQLANLNRGMDEDDEDYDEEG 281

The following BLAST results are available for this feature:

BLAST of CmaCh20G001360 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NC2A_DICDI	1.5e-22	49.59	Dr1-associated corepressor homolog OS=Dictyostelium discoideum GN=drap1 PE=3 SV=...	[more]
NC2A_BOVIN	9.4e-22	39.20	Dr1-associated corepressor OS=Bos taurus GN=DRAP1 PE=2 SV=1	[more]
NC2A_RAT	4.7e-21	38.64	Dr1-associated corepressor OS=Rattus norvegicus GN=Drap1 PE=2 SV=1	[more]
NC2A_MOUSE	6.1e-21	38.64	Dr1-associated corepressor OS=Mus musculus GN=Drap1 PE=1 SV=3	[more]
NC2A_HUMAN	8.0e-21	38.64	Dr1-associated corepressor OS=Homo sapiens GN=DRAP1 PE=1 SV=3	[more]

BLAST of CmaCh20G001360 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KI73_CUCSA	2.7e-132	88.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G426970 PE=4 SV=1	[more]
D7T1D7_VITVI	9.9e-87	63.58	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g02120 PE=4 SV=...	[more]
W9S4H1_9ROSA	3.3e-82	63.54	Dr1-associated corepressor OS=Morus notabilis GN=L484_004719 PE=4 SV=1	[more]
A0A068UMH5_COFCA	7.4e-82	60.55	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00030141001 PE=4 SV=1	[more]
A0A124SBS1_CYNCS	4.8e-81	63.67	Histone-fold OS=Cynara cardunculus var. scolymus GN=Ccrd_006455 PE=4 SV=1	[more]

BLAST of CmaCh20G001360 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12480.1	2.4e-60	50.16	nuclear factor Y, subunit C11	[more]
AT5G19490.1	2.6e-54	50.53	Histone superfamily protein	[more]
AT5G63470.1	1.5e-09	38.20	nuclear factor Y, subunit C4	[more]
AT3G48590.1	5.7e-09	40.26	nuclear factor Y, subunit C1	[more]
AT5G50490.1	5.7e-09	37.63	nuclear factor Y, subunit C5	[more]

BLAST of CmaCh20G001360 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659097410\|ref\|XP_008449610.1\|	2.2e-132	88.21	PREDICTED: dr1-associated corepressor-like isoform X1 [Cucumis melo]	[more]
gi\|449445015\|ref\|XP_004140269.1\|	3.8e-132	88.57	PREDICTED: dr1-associated corepressor-like [Cucumis sativus]	[more]
gi\|659097412\|ref\|XP_008449611.1\|	5.5e-131	88.21	PREDICTED: dr1-associated corepressor-like isoform X2 [Cucumis melo]	[more]
gi\|1009161216\|ref\|XP_015898777.1\|	2.5e-91	66.55	PREDICTED: dr1-associated corepressor homolog [Ziziphus jujuba]	[more]
gi\|702474902\|ref\|XP_010031686.1\|	1.2e-88	64.66	PREDICTED: dr1-associated corepressor-like [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003958	CBFA_NFYB_domain
IPR009072	Histone-fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0046982	protein heterodimerization activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G001360.1	CmaCh20G001360.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 8..71 score: 1.3
IPR009072	Histone-fold	GENE3D	G3DSA:1.10.20.10		coord: 2..72 score: 5.3
IPR009072	Histone-fold	unknown	SSF47113	Histone-fold	coord: 3..89 score: 4.01
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 3..270 score: 3.4
None	No IPR available	PANTHER	PTHR10252:SF40	SUBFAMILY NOT NAMED	coord: 3..270 score: 3.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh20G001360	Cucsa.086680	Cucumber (Gy14) v1	cgycmaB0166
CmaCh20G001360	Cla008607	Watermelon (97103) v1	cmawmB531
CmaCh20G001360	Csa6G426970	Cucumber (Chinese Long) v2	cmacuB562
CmaCh20G001360	MELO3C014530	Melon (DHL92) v3.5.1	cmameB521
CmaCh20G001360	ClCG02G022540	Watermelon (Charleston Gray)	cmawcgB489
CmaCh20G001360	CSPI06G23520	Wild cucumber (PI 183967)	cmacpiB569
CmaCh20G001360	CmoCh20G001520	Cucurbita moschata (Rifu)	cmacmoB550
CmaCh20G001360	Lsi10G011250	Bottle gourd (USVL1VR-Ls)	cmalsiB500
CmaCh20G001360	Cp4.1LG16g08380	Cucurbita pepo (Zucchini)	cmacpeB564
CmaCh20G001360	MELO3C014530.2	Melon (DHL92) v3.6.1	cmamedB598
CmaCh20G001360	CsaV3_6G038670	Cucumber (Chinese Long) v3	cmacucB0676
CmaCh20G001360	Cla97C02G048620	Watermelon (97103) v2	cmawmbB577
CmaCh20G001360	CsGy6G022840	Cucumber (Gy14) v2	cgybcmaB799
CmaCh20G001360	Carg18396	Silver-seed gourd	carcmaB0575

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh20G001360	Cucurbita pepo (Zucchini)	cmacpeB586
CmaCh20G001360	Melon (DHL92) v3.6.1	cmamedB595
CmaCh20G001360	Silver-seed gourd	carcmaB1267
CmaCh20G001360	Wax gourd	cmawgoB0693
CmaCh20G001360	Cucurbita maxima (Rimu)	cmacmaB470
CmaCh20G001360	Cucurbita moschata (Rifu)	cmacmoB555