CmaCh20G000370 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh20G000370
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_155
Location	Cma_Chr20 : 161345 .. 163829 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAACAATTTAGTCCTGACGGGAAACACGACCAAGGAATGAGCTAAAGCGGAAGATAGGAGTGATTAGGCGGTGAATAAAGACCAGATCTTTGGGTAAGCATTTGTCAATCTGGATCAATGAGAATCAAGCAAACGAGTTTATCCTATTCTCGTCTCCCCAAATCTCTGTCACCCCGCACCGCCATTGCTGTAGCCCCATACAAATCCCTACACCATTCACCACCTCAAATCCCCTCTTCAAACAACTGAAGAAGAAGACCCATGGCGGCTCCCACCACAAATTCTCATCTGGGTGTAATATTTTTCACCTCCTTCGTCTTCTTGGCCGCACTTCCTTCGGTCCCTGTAGCAGCACCCGATGCTCCCACTGTCTATGATATCCTCCCCCAATATGGGCTTCCCAGTGGCCTTTTACCTGACTCCGTCATCGATTACACCCTCTCATCCGATGGTCAATTTGTCGTTCACTTGGCCAAACCCTGCTACGTTGAGTTCGATTACTTGGTTTATTACCACAACACCATCACGGGGAAGCTTCAATACGGCTCCATCACTCATCTGGACGGTATCGAGGTTCAGAAATTGTTCCTGTGGTTCGACGTGAAGGAAATCAGAGTCGATTTGCCGCCTTCTCATAACATCTACTTCCAGGTTGGGTTTATCAACAAGAAACTCGACGCAGACCAGTTCAAGACCGTCCACTCGTGCCAGGACAATGGTTTGGGCTCTTGCCTTGCCTCCTGGAAACGGATTCTTGAGGTATATTCGATTATAATTTGCATTTTCCCCCTTTATCTCTATACTTTAGAATCTAATTTGGGGCTATTATCTTTCCTGATTATCATAAACTTATGGGTGTCCGTTAGTAATCGCTCCGCTCTGTTCATGCTTTCAACTCTATAATTGCGGTACTTTTACCGTTGTTCTATTCCGTAGAGAAAAATCTGTTGGACAGTACTTTGTTAAAAAGTGTGATAGATTCTGTGAAGTTTGAAGAAATCTTGCTTTTAAAGCATGATGCCATGTACGAACTCGACTGCTAGAAGGACAAGCTCAAGGGAACATGGTCATCACTGGGCTTTCCCTTCCAAGTTCCCCTCTAGATTTTAAAACTCTCTCTCCCACTATTAGGAAAAGTTTCCACACTCTCTTATAAGGAATGGTTTGTTCTCCTTTCCAACCGTGGGATCTCACAATTCACCGCCCTCTCTGACACATTGCCTAGTGTCGATACCATTTGTAACGCTCCAAGCCCACTGCTAATAGATATTGTCTGGTTTGACTTGTTACGCTGTCAACCTCACGGTTTTAAAACGCGTCTATTTGGGAGAGATTTTCAACACCTATCTAAGGAATGTTTCGTTCCCCTCTCCAACCGATATGGATAGCTAGCAGTGGGTTTGGGCTGTTACAGATGGTATCAGAGCCAAATACCAGGCAGTGTGCTAGCGAGGACGTTGGGCCTCCAAGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGAGGAACGAAACATTCCTTGTATGGGTGTGAAAAACCTCTCTTTAGTAGACGCGTTTTAAAATCGTGAGGCTGACGGCGGTACGTGATAGCCAAAACAGACAATATTTGTTAGTAGTGGTCGTTGTATCTAGAAGAGAAAGGATATGCAAAAAGGAGAGTGGAATGTACACAAATGACCAAAAGAATCAAACCATTTGAATTCGTGTGCTATAAGAAAGTTTATGATCATTAGCTTTACCATCATTAGCTCCTATGTTTCTGTTTCAAATTCTGCCTGGGTAACTTTTTCCAGTGAACATAGTTATTTTGGCCGCCTGATATTCCAATATGCTAGTCTCAGTGCTCTCTCTGTTTCTATGACTTATTGCAAGTTTCAAGAATGGTACAGAGTGTGTGTTTTGGAGAGTAATTCTTCATATGCCAATACTTTTTCATTGCTGCTCACAGCTCCCAACACCAATAGATGACATCCAGATGCTGATCACTGAGTAGCTCGCTGTCAGTTGTCCAAGCTCTTGAAGTTCTTCGGTTGCTGCCTTATCTAAATTAGCCGAAGAAATATAGATGTTTTAAGGTATCTGGTCTCAGTTTAGACGCCAAAATATCAATGTCTATCTTTGAAGACCCATGATATGATATGACTGTGTTAATATTATATTAGATTAGATTAGATGAGTCTTCTCAGTTTGATCCTTAAAAAAGTGCCTAAAACTTTGGCATTTCAGGTATTATGAATGAGATGTTATATTAACTATATATTAACTAAAACTTTGGTATTTGATTAGTGGGATTAAAGATGGCATAATTCTCAAATGCCATGGTTCAATGCGAGAATAAAGAATCGCATTACAAGGGAAAATCTTTTTCAATTATCTTCTGTTTCTTACATTCTCTTAACTGTAGTCTTGGAGAAGATGTTATGTTCCATCTTTCTTTTCTTTTTTTTTCATTGTTAAAAATGGTTGTCATCCATAATTCA

mRNA sequence

TTTAACAATTTAGTCCTGACGGGAAACACGACCAAGGAATGAGCTAAAGCGGAAGATAGGAGTGATTAGGCGGTGAATAAAGACCAGATCTTTGGGTAAGCATTTGTCAATCTGGATCAATGAGAATCAAGCAAACGAGTTTATCCTATTCTCGTCTCCCCAAATCTCTGTCACCCCGCACCGCCATTGCTGTAGCCCCATACAAATCCCTACACCATTCACCACCTCAAATCCCCTCTTCAAACAACTGAAGAAGAAGACCCATGGCGGCTCCCACCACAAATTCTCATCTGGGTGTAATATTTTTCACCTCCTTCGTCTTCTTGGCCGCACTTCCTTCGGTCCCTGTAGCAGCACCCGATGCTCCCACTGTCTATGATATCCTCCCCCAATATGGGCTTCCCAGTGGCCTTTTACCTGACTCCGTCATCGATTACACCCTCTCATCCGATGGTCAATTTGTCGTTCACTTGGCCAAACCCTGCTACGTTGAGTTCGATTACTTGGTTTATTACCACAACACCATCACGGGGAAGCTTCAATACGGCTCCATCACTCATCTGGACGGTATCGAGGTTCAGAAATTGTTCCTGTGGTTCGACGTGAAGGAAATCAGAGTCGATTTGCCGCCTTCTCATAACATCTACTTCCAGGTTGGGTTTATCAACAAGAAACTCGACGCAGACCAGTTCAAGACCGTCCACTCGTGCCAGGACAATGGTTTGGGCTCTTGCCTTGCCTCCTGGAAACGGATTCTTGAGCTCCCAACACCAATAGATGACATCCAGATGCTGATCACTGAGTAGCTCGCTGTCAGTTGTCCAAGCTCTTGAAGTTCTTCGGTTGCTGCCTTATCTAAATTAGCCGAAGAAATATAGATGTTTTAAGGTATCTGGTCTCAGTTTAGACGCCAAAATATCAATGTCTATCTTTGAAGACCCATGATATGATATGACTGTGTTAATATTATATTAGATTAGATTAGATGAGTCTTCTCAGTTTGATCCTTAAAAAAGTGCCTAAAACTTTGGCATTTCAGGTATTATGAATGAGATGTTATATTAACTATATATTAACTAAAACTTTGGTATTTGATTAGTGGGATTAAAGATGGCATAATTCTCAAATGCCATGGTTCAATGCGAGAATAAAGAATCGCATTACAAGGGAAAATCTTTTTCAATTATCTTCTGTTTCTTACATTCTCTTAACTGTAGTCTTGGAGAAGATGTTATGTTCCATCTTTCTTTTCTTTTTTTTTCATTGTTAAAAATGGTTGTCATCCATAATTCA

Coding sequence (CDS)

ATGGCGGCTCCCACCACAAATTCTCATCTGGGTGTAATATTTTTCACCTCCTTCGTCTTCTTGGCCGCACTTCCTTCGGTCCCTGTAGCAGCACCCGATGCTCCCACTGTCTATGATATCCTCCCCCAATATGGGCTTCCCAGTGGCCTTTTACCTGACTCCGTCATCGATTACACCCTCTCATCCGATGGTCAATTTGTCGTTCACTTGGCCAAACCCTGCTACGTTGAGTTCGATTACTTGGTTTATTACCACAACACCATCACGGGGAAGCTTCAATACGGCTCCATCACTCATCTGGACGGTATCGAGGTTCAGAAATTGTTCCTGTGGTTCGACGTGAAGGAAATCAGAGTCGATTTGCCGCCTTCTCATAACATCTACTTCCAGGTTGGGTTTATCAACAAGAAACTCGACGCAGACCAGTTCAAGACCGTCCACTCGTGCCAGGACAATGGTTTGGGCTCTTGCCTTGCCTCCTGGAAACGGATTCTTGAGCTCCCAACACCAATAGATGACATCCAGATGCTGATCACTGAGTAG

Protein sequence

MAAPTTNSHLGVIFFTSFVFLAALPSVPVAAPDAPTVYDILPQYGLPSGLLPDSVIDYTLSSDGQFVVHLAKPCYVEFDYLVYYHNTITGKLQYGSITHLDGIEVQKLFLWFDVKEIRVDLPPSHNIYFQVGFINKKLDADQFKTVHSCQDNGLGSCLASWKRILELPTPIDDIQMLITE

Homology

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BLAST of CmaCh20G000370 vs. TrEMBL
Match: A0A0A0KX35_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280550 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 4.0e-81
Identity = 145/173 (83.82%), Postives = 156/173 (90.17%), Query Frame = 1


Query: 8   SHLGVIFFTSFVFLAALPSVPVAAPDAPTVYDILPQYGLPSGLLPDSVIDYTLSSDGQFV 67
           SHLG+IFFT FVFL ++PS+  A  DAPTVYD+LP+YGLPSGLLPDSV+DYTLSSDGQFV
Sbjct: 4   SHLGLIFFTFFVFLTSIPSLSAAGSDAPTVYDVLPKYGLPSGLLPDSVLDYTLSSDGQFV 63

Query: 68  VHLAKPCYVEFDYLVYYHNTITGKLQYGSITHLDGIEVQKLFLWFDVKEIRVDLPPSHNI 127
           VHLAKPCY+ FDYLVYYH TITGKL+YGSIT LDGIEVQKLFLWFDVKEIRVDLPPS NI
Sbjct: 64  VHLAKPCYIHFDYLVYYHKTITGKLEYGSITDLDGIEVQKLFLWFDVKEIRVDLPPSDNI 123

Query: 128 YFQVGFINKKLDADQFKTVHSCQDNGLGSCLASWKRILELPTPIDDIQMLITE 181
           YFQVGFINKKLD DQFKT+HSCQDN L + L SWKRILELP PI DIQMLITE
Sbjct: 124 YFQVGFINKKLDIDQFKTIHSCQDNALATSLGSWKRILELPPPIGDIQMLITE 176

[Close]

BLAST of CmaCh20G000370 vs. TrEMBL
Match: A0A061GS45_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_040152 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 2.3e-60
Identity = 116/184 (63.04%), Postives = 142/184 (77.17%), Query Frame = 1


Query: 1   MAAPTTNSHLGVIFFTSFVFLAALPSV----PVAAPDAPTVYDILPQYGLPSGLLPDSVI 60
           MA+   NS+LG+   + F+ L+   S+    P  AP  PTV+DILP+YGLPSGLLP +V 
Sbjct: 1   MASNNLNSNLGLALISIFLLLSNPISLSEAEPEPAPAPPTVWDILPKYGLPSGLLPSTVT 60

Query: 61  DYTLSSDGQFVVHLAKPCYVEFDYLVYYHNTITGKLQYGSITHLDGIEVQKLFLWFDVKE 120
           +Y+L +DG+F+V L  PCYV+F+YLVYY  TITGKL YGSIT L GI+VQ+ FLWFDV E
Sbjct: 61  NYSLQNDGRFIVVLESPCYVQFEYLVYYEKTITGKLGYGSITDLKGIQVQRFFLWFDVDE 120

Query: 121 IRVDLPPSHNIYFQVGFINKKLDADQFKTVHSCQDNGLGSCLASWKRILELPTPIDDIQM 180
           I+VDLPPS +IYFQVGFINKKLD DQFKT+HSC+D   GSC  SWK +L+LP P +DIQM
Sbjct: 121 IKVDLPPSDSIYFQVGFINKKLDVDQFKTIHSCRDGVTGSCGYSWKSVLQLPMPTNDIQM 180

[Close]

BLAST of CmaCh20G000370 vs. TrEMBL
Match: A0A067JTM4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22853 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.1e-58
Identity = 118/187 (63.10%), Postives = 138/187 (73.80%), Query Frame = 1


Query: 1   MAAPTTNSHLGVIFFTSFVFLAALPSVPVAA-------PDAPTVYDILPQYGLPSGLLPD 60
           MA+P  NS LG  F + F+FL+   S PV +        ++ +VY+ILP+YGLPSGLLP+
Sbjct: 1   MASPNPNSSLGFAFLSIFLFLSL--SKPVLSLYNTGLQDESSSVYEILPKYGLPSGLLPN 60

Query: 61  SVIDYTLSSDGQFVVHLAKPCYVEFDYLVYYHNTITGKLQYGSITHLDGIEVQKLFLWFD 120
           SVI+YTLS DG+F V L KPCY++FDYLVYY   ITGKL YGSIT L GIEVQ+ FLW +
Sbjct: 61  SVINYTLSDDGRFAVLLEKPCYIQFDYLVYYDKRITGKLSYGSITDLKGIEVQRFFLWLN 120

Query: 121 VKEIRVDLPPSHNIYFQVGFINKKLDADQFKTVHSCQDNGLGSCLASWKRILELPTPIDD 180
           V EI+VDLPPS +IYF VG INKKLD DQFKTV SC+D   GSC   W RILELP P DD
Sbjct: 121 VDEIKVDLPPSDSIYFHVGIINKKLDLDQFKTVRSCRDKVSGSCGRVWNRILELPAPSDD 180

[Close]

BLAST of CmaCh20G000370 vs. TrEMBL
Match: A0A0D2R1N7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G094100 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.0e-56
Identity = 111/183 (60.66%), Postives = 138/183 (75.41%), Query Frame = 1


Query: 1   MAAPTTNSHLGVIFFTSFVFLAALP---SVPVAAPDAPTVYDILPQYGLPSGLLPDSVID 60
           MAA   NSHLG+      +FL ++P   SV    P  P+V+DILP++GLPSGLLP +V D
Sbjct: 1   MAANHFNSHLGLAL-AYLIFLISIPKSLSVLEPQPAPPSVWDILPKFGLPSGLLPSTVTD 60

Query: 61  YTLSSDGQFVVHLAKPCYVEFDYLVYYHNTITGKLQYGSITHLDGIEVQKLFLWFDVKEI 120
           Y L  DG+F+V L  PCY++F+YLVYY  TITGKL YGSIT L+GI+VQ+ FLWFDV EI
Sbjct: 61  YVLHDDGRFIVMLDSPCYIQFEYLVYYEKTITGKLGYGSITDLEGIQVQRFFLWFDVNEI 120

Query: 121 RVDLPPSHNIYFQVGFINKKLDADQFKTVHSCQDNGLGSCLASWKRILELPTPIDDIQML 180
           +VDLPPS +IYFQVGFINKKLD DQFKT+HSC+D   GSC  S + +L+LP P ++I+ L
Sbjct: 121 KVDLPPSDSIYFQVGFINKKLDVDQFKTIHSCRDEVTGSCKYSSESLLQLPMPRNEIEEL 180

[Close]

BLAST of CmaCh20G000370 vs. TrEMBL
Match: A0A0D2TSS2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G005200 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.6e-56
Identity = 108/178 (60.67%), Postives = 129/178 (72.47%), Query Frame = 1


Query: 3   APTTNSHLGVIFFTSFVFLAALPSVPVAAPDAPTVYDILPQYGLPSGLLPDSVIDYTLSS 62
           A   NSHLG     S +FL ++P    A    P V+D+LP+YGLP GLLP +V DY L  
Sbjct: 2   AANKNSHLGFSLI-SLIFLFSIPKSVSALDPQPAVWDMLPKYGLPGGLLPSTVTDYVLHE 61

Query: 63  DGQFVVHLAKPCYVEFDYLVYYHNTITGKLQYGSITHLDGIEVQKLFLWFDVKEIRVDLP 122
           DG+F+V L  PCYV+F+YLVYY  TITGKL YGSIT L GI+V++   W DV EI VDLP
Sbjct: 62  DGRFIVTLGSPCYVQFEYLVYYDKTITGKLGYGSITDLKGIQVKRFLFWLDVDEITVDLP 121

Query: 123 PSHNIYFQVGFINKKLDADQFKTVHSCQDNGLGSCLASWKRILELPTPIDDIQMLITE 181
           P+ +IYFQVGFINKKLD DQF+TVHSC+D   GSC  SWK +L+LP P +DIQMLITE
Sbjct: 122 PTGSIYFQVGFINKKLDVDQFQTVHSCRDGVTGSCKYSWKSVLQLPMPTNDIQMLITE 178

[Close]

BLAST of CmaCh20G000370 vs. TAIR10
Match: AT5G19860.1 (AT5G19860.1 Protein of unknown function, DUF538)

HSP 1 Score: 208.4 bits (529), Expect = 3.7e-54
Identity = 102/174 (58.62%), Postives = 130/174 (74.71%), Query Frame = 1


Query: 10  LGVIFFTSFVFLAALPSVPVAAPDA-PTVYDILPQYGLPSGLLPDSVIDYTLSSDGQFVV 69
           + +  F+  +F     S+    PD+  TVY++LP+YGLPSGLLPD+V D+TLS DG+FVV
Sbjct: 8   ISIFIFSLTLFTTTTHSLNEPDPDSISTVYELLPKYGLPSGLLPDTVTDFTLSDDGRFVV 67

Query: 70  HLAKPCYVEFDYLVYYHNTITGKLQYGSITHLDGIEVQKLFLWFDVKEIRVDLPPSHNIY 129
           HL   C +EFDYLV+Y  TI+G++ YGSIT L GI+V+K F+W DV EI+VDLPPS +IY
Sbjct: 68  HLPNSCEIEFDYLVHYDKTISGRIGYGSITELKGIQVKKFFIWLDVDEIKVDLPPSDSIY 127

Query: 130 FQVGFINKKLDADQFKTVHSCQDNGL-GSCLASWKRILEL-PTPIDDIQMLITE 181
           F+VGFINKKLD DQFKT+HSC DNG+ GSC  SWK  LE     +D+ +MLITE
Sbjct: 128 FKVGFINKKLDIDQFKTIHSCHDNGVSGSCGDSWKSFLEKGQGMMDEAEMLITE 181

[Close]

BLAST of CmaCh20G000370 vs. TAIR10
Match: AT1G55265.1 (AT1G55265.1 Protein of unknown function, DUF538)

HSP 1 Score: 116.3 bits (290), Expect = 1.9e-26
Identity = 55/120 (45.83%), Postives = 75/120 (62.50%), Query Frame = 1


Query: 34  APTVYDILPQYGLPSGLLPDSVIDYTLSSDGQFVVHLAKPCYVEF-DYLVYYHNTITGKL 93
           A  ++D+LP+YG P GLLP++V  YT+S DG F V L   CYV+F D LV+Y   I GKL
Sbjct: 51  ADDIHDLLPRYGFPKGLLPNNVKSYTISDDGDFTVDLISSCYVKFSDQLVFYGKNIAGKL 110

Query: 94  QYGSITHLDGIEVQKLFLWFDVKEIRVDLPPSHNIYFQVGFINKKLDADQFKTVHSCQDN 153
            YGS+  + GI+ ++ FLW  +  +  D P S  + F VGF++K L A  F+ V SC  N
Sbjct: 111 SYGSVKDVRGIQAKEAFLWLPITAMESD-PSSATVVFSVGFVSKTLPASMFENVPSCSRN 169

[Close]

BLAST of CmaCh20G000370 vs. TAIR10
Match: AT5G54530.1 (AT5G54530.1 Protein of unknown function, DUF538)

HSP 1 Score: 109.8 bits (273), Expect = 1.8e-24
Identity = 51/129 (39.53%), Postives = 79/129 (61.24%), Query Frame = 1


Query: 26  SVPVAAPDAPTVYDILPQYGLPSGLLPDSVIDYTLSSDGQFVVHLAKPCYVEFDYLVYYH 85
           S+ +++P  PTV+D+L   GLP+GLLP  V  Y L +DG+  V LA PCY +F+  V++ 
Sbjct: 18  SLSLSSPSYPTVHDVLRSEGLPAGLLPQEVDSYILHNDGRLEVFLAAPCYAKFETNVHFE 77

Query: 86  NTITGKLQYGSITHLDGIEVQKLFLWFDVKEIRVDLPPSHNIYFQVGFINKKLDADQFKT 145
             + G L YGS+  ++G+  ++LFLW  VK+I V+ P S  I F +G   K+L    F+ 
Sbjct: 78  AVVRGNLSYGSLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFDIGVAFKQLSLSLFED 137

Query: 146 VHSCQDNGL 155
              C+ +G+
Sbjct: 138 PPKCKPDGV 146

[Close]

BLAST of CmaCh20G000370 vs. TAIR10
Match: AT3G07470.1 (AT3G07470.1 Protein of unknown function, DUF538)

HSP 1 Score: 101.7 bits (252), Expect = 4.9e-22
Identity = 54/138 (39.13%), Postives = 79/138 (57.25%), Query Frame = 1


Query: 13  IFFTSFVFLAALPSVPVAAPDAPTVYDILPQYGLPSGLLPDSVIDYTLSSD-GQFVVHLA 72
           I F   V +A + S+  A  +  T+Y+IL   GLPSG+ P  V ++T   + G+F V+L 
Sbjct: 8   IAFLCLVLVAGI-SISTAISETETIYEILLANGLPSGIFPKGVREFTFDVETGRFSVYLN 67

Query: 73  KPCYVEFDYLVYYHNTITGKLQYGSITHLDGIEVQKLFLWFDVKEIRVDLPPSHNIYFQV 132
           + C  +++  ++Y   ITG +    I+ L GI  Q+LFLWF VK IRVD+P S  IYF V
Sbjct: 68  QACEAKYETEIHYDANITGTIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSGLIYFDV 127

Query: 133 GFINKKLDADQFKTVHSC 150
           G + K+     F+T   C
Sbjct: 128 GVVRKQYSLSLFETPRDC 144

[Close]

BLAST of CmaCh20G000370 vs. TAIR10
Match: AT3G07460.2 (AT3G07460.2 Protein of unknown function, DUF538)

HSP 1 Score: 89.7 bits (221), Expect = 1.9e-18
Identity = 50/142 (35.21%), Postives = 78/142 (54.93%), Query Frame = 1


Query: 10  LGVIFFTSFVF-LAALPSVPVAAPDAPTVYDILPQYGLPSGLLPDSVIDYTLSSD-GQFV 69
           L ++  T   F LAA  S+     +  ++ +IL   GLP GL P  V  +T++ + G+F 
Sbjct: 2   LRIVQITLLCFVLAAGISISAVIAENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFS 61

Query: 70  VHLAKPCYVEFDYLVYYHNTITGKLQYGSITHLDGIEVQKLFLWFDVKEIRVDLPPSHNI 129
           V+L + C  +++  ++Y   ++G + Y  I  L GI  Q+LFLW  VK IRVD+P S  I
Sbjct: 62  VYLNQSCQAKYETELHYDEIVSGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLI 121

Query: 130 YFQVGFINKKLDADQFKTVHSC 150
           +F VG + K+     F+T   C
Sbjct: 122 FFDVGVLRKQYSLSLFETPRDC 143

[Close]

BLAST of CmaCh20G000370 vs. NCBI nr
Match: gi|659097761|ref|XP_008449800.1| (PREDICTED: uncharacterized protein LOC103491580 [Cucumis melo])

HSP 1 Score: 310.8 bits (795), Expect = 1.5e-81
Identity = 146/173 (84.39%), Postives = 156/173 (90.17%), Query Frame = 1


Query: 8   SHLGVIFFTSFVFLAALPSVPVAAPDAPTVYDILPQYGLPSGLLPDSVIDYTLSSDGQFV 67
           SHLG+IFFT FVFL ++P +  A  DAPTVYD+LP+YGLPSGLLPDSV+DYTLSSDGQFV
Sbjct: 4   SHLGLIFFTFFVFLTSIPPLSAAGSDAPTVYDVLPKYGLPSGLLPDSVLDYTLSSDGQFV 63

Query: 68  VHLAKPCYVEFDYLVYYHNTITGKLQYGSITHLDGIEVQKLFLWFDVKEIRVDLPPSHNI 127
           VHLAKPCY+ FDYLVYYH TITGKL+YGSIT LDGIEVQKLFLWFDVKEIRVDLPPS NI
Sbjct: 64  VHLAKPCYIHFDYLVYYHKTITGKLEYGSITDLDGIEVQKLFLWFDVKEIRVDLPPSDNI 123

Query: 128 YFQVGFINKKLDADQFKTVHSCQDNGLGSCLASWKRILELPTPIDDIQMLITE 181
           YFQVGFINKKLD DQFKT+HSCQDN L S L SWKRILELP PIDDIQMLITE
Sbjct: 124 YFQVGFINKKLDIDQFKTIHSCQDNALASSLGSWKRILELPPPIDDIQMLITE 176

[Close]

BLAST of CmaCh20G000370 vs. NCBI nr
Match: gi|449448818|ref|XP_004142162.1| (PREDICTED: uncharacterized protein LOC101215998 [Cucumis sativus])

HSP 1 Score: 308.9 bits (790), Expect = 5.8e-81
Identity = 145/173 (83.82%), Postives = 156/173 (90.17%), Query Frame = 1


Query: 8   SHLGVIFFTSFVFLAALPSVPVAAPDAPTVYDILPQYGLPSGLLPDSVIDYTLSSDGQFV 67
           SHLG+IFFT FVFL ++PS+  A  DAPTVYD+LP+YGLPSGLLPDSV+DYTLSSDGQFV
Sbjct: 4   SHLGLIFFTFFVFLTSIPSLSAAGSDAPTVYDVLPKYGLPSGLLPDSVLDYTLSSDGQFV 63

Query: 68  VHLAKPCYVEFDYLVYYHNTITGKLQYGSITHLDGIEVQKLFLWFDVKEIRVDLPPSHNI 127
           VHLAKPCY+ FDYLVYYH TITGKL+YGSIT LDGIEVQKLFLWFDVKEIRVDLPPS NI
Sbjct: 64  VHLAKPCYIHFDYLVYYHKTITGKLEYGSITDLDGIEVQKLFLWFDVKEIRVDLPPSDNI 123

Query: 128 YFQVGFINKKLDADQFKTVHSCQDNGLGSCLASWKRILELPTPIDDIQMLITE 181
           YFQVGFINKKLD DQFKT+HSCQDN L + L SWKRILELP PI DIQMLITE
Sbjct: 124 YFQVGFINKKLDIDQFKTIHSCQDNALATSLGSWKRILELPPPIGDIQMLITE 176

[Close]

BLAST of CmaCh20G000370 vs. NCBI nr
Match: gi|1009123859|ref|XP_015878764.1| (PREDICTED: uncharacterized protein LOC107415023 [Ziziphus jujuba])

HSP 1 Score: 240.0 bits (611), Expect = 3.3e-60
Identity = 117/180 (65.00%), Postives = 141/180 (78.33%), Query Frame = 1


Query: 3   APTTNSHLG-VIFFTSFVFLAALPSVPVAAPDAPTVYDILPQYGLPSGLLPDSVIDYTLS 62
           AP    HLG  +F   FV +   P + ++  D PTVY+IL Q+GLPSGLLPDSV  YTLS
Sbjct: 2   APNPKPHLGFALFLLLFVSIVTTPCLTLS--DTPTVYEILSQFGLPSGLLPDSVTSYTLS 61

Query: 63  SDGQFVVHLAKPCYVEFDYLVYYHNTITGKLQYGSITHLDGIEVQKLFLWFDVKEIRVDL 122
            DG+F+VHL KPCYVEF+YLVYY  TITGKL YGSIT L GI+V++L  WFDV EI+VDL
Sbjct: 62  DDGRFIVHLEKPCYVEFEYLVYYEKTITGKLSYGSITDLKGIQVKRLLFWFDVDEIKVDL 121

Query: 123 PPSHNIYFQVGFINKKLDADQFKTVHSCQDNGLG-SCLASWKRILELPTPIDDIQMLITE 181
           PPS++IYFQVG INKKLD +QFKTVHSC+D   G SCL + KR+LELP+P+++IQMLITE
Sbjct: 122 PPSNSIYFQVGIINKKLDVEQFKTVHSCRDGLSGASCLGTLKRVLELPSPMEEIQMLITE 179

[Close]

BLAST of CmaCh20G000370 vs. NCBI nr
Match: gi|590582776|ref|XP_007014717.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 240.0 bits (611), Expect = 3.3e-60
Identity = 116/184 (63.04%), Postives = 142/184 (77.17%), Query Frame = 1


Query: 1   MAAPTTNSHLGVIFFTSFVFLAALPSV----PVAAPDAPTVYDILPQYGLPSGLLPDSVI 60
           MA+   NS+LG+   + F+ L+   S+    P  AP  PTV+DILP+YGLPSGLLP +V 
Sbjct: 1   MASNNLNSNLGLALISIFLLLSNPISLSEAEPEPAPAPPTVWDILPKYGLPSGLLPSTVT 60

Query: 61  DYTLSSDGQFVVHLAKPCYVEFDYLVYYHNTITGKLQYGSITHLDGIEVQKLFLWFDVKE 120
           +Y+L +DG+F+V L  PCYV+F+YLVYY  TITGKL YGSIT L GI+VQ+ FLWFDV E
Sbjct: 61  NYSLQNDGRFIVVLESPCYVQFEYLVYYEKTITGKLGYGSITDLKGIQVQRFFLWFDVDE 120

Query: 121 IRVDLPPSHNIYFQVGFINKKLDADQFKTVHSCQDNGLGSCLASWKRILELPTPIDDIQM 180
           I+VDLPPS +IYFQVGFINKKLD DQFKT+HSC+D   GSC  SWK +L+LP P +DIQM
Sbjct: 121 IKVDLPPSDSIYFQVGFINKKLDVDQFKTIHSCRDGVTGSCGYSWKSVLQLPMPTNDIQM 180

[Close]

BLAST of CmaCh20G000370 vs. NCBI nr
Match: gi|802725363|ref|XP_012086040.1| (PREDICTED: uncharacterized protein LOC105645131 [Jatropha curcas])

HSP 1 Score: 233.4 bits (594), Expect = 3.1e-58
Identity = 118/187 (63.10%), Postives = 138/187 (73.80%), Query Frame = 1


Query: 1   MAAPTTNSHLGVIFFTSFVFLAALPSVPVAA-------PDAPTVYDILPQYGLPSGLLPD 60
           MA+P  NS LG  F + F+FL+   S PV +        ++ +VY+ILP+YGLPSGLLP+
Sbjct: 1   MASPNPNSSLGFAFLSIFLFLSL--SKPVLSLYNTGLQDESSSVYEILPKYGLPSGLLPN 60

Query: 61  SVIDYTLSSDGQFVVHLAKPCYVEFDYLVYYHNTITGKLQYGSITHLDGIEVQKLFLWFD 120
           SVI+YTLS DG+F V L KPCY++FDYLVYY   ITGKL YGSIT L GIEVQ+ FLW +
Sbjct: 61  SVINYTLSDDGRFAVLLEKPCYIQFDYLVYYDKRITGKLSYGSITDLKGIEVQRFFLWLN 120

Query: 121 VKEIRVDLPPSHNIYFQVGFINKKLDADQFKTVHSCQDNGLGSCLASWKRILELPTPIDD 180
           V EI+VDLPPS +IYF VG INKKLD DQFKTV SC+D   GSC   W RILELP P DD
Sbjct: 121 VDEIKVDLPPSDSIYFHVGIINKKLDLDQFKTVRSCRDKVSGSCGRVWNRILELPAPSDD 180

The following BLAST results are available for this feature:

BLAST of CmaCh20G000370 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh20G000370 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KX35_CUCSA	4.0e-81	83.82	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280550 PE=4 SV=1	[more]
A0A061GS45_THECC	2.3e-60	63.04	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_040152 PE=4 SV=1	[more]
A0A067JTM4_JATCU	2.1e-58	63.10	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22853 PE=4 SV=1	[more]
A0A0D2R1N7_GOSRA	2.0e-56	60.66	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G094100 PE=4 SV=1	[more]
A0A0D2TSS2_GOSRA	2.6e-56	60.67	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G005200 PE=4 SV=1	[more]

BLAST of CmaCh20G000370 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G19860.1	3.7e-54	58.62	Protein of unknown function, DUF538	[more]
AT1G55265.1	1.9e-26	45.83	Protein of unknown function, DUF538	[more]
AT5G54530.1	1.8e-24	39.53	Protein of unknown function, DUF538	[more]
AT3G07470.1	4.9e-22	39.13	Protein of unknown function, DUF538	[more]
AT3G07460.2	1.9e-18	35.21	Protein of unknown function, DUF538	[more]

BLAST of CmaCh20G000370 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659097761\|ref\|XP_008449800.1\|	1.5e-81	84.39	PREDICTED: uncharacterized protein LOC103491580 [Cucumis melo]	[more]
gi\|449448818\|ref\|XP_004142162.1\|	5.8e-81	83.82	PREDICTED: uncharacterized protein LOC101215998 [Cucumis sativus]	[more]
gi\|1009123859\|ref\|XP_015878764.1\|	3.3e-60	65.00	PREDICTED: uncharacterized protein LOC107415023 [Ziziphus jujuba]	[more]
gi\|590582776\|ref\|XP_007014717.1\|	3.3e-60	63.04	Uncharacterized protein isoform 1 [Theobroma cacao]	[more]
gi\|802725363\|ref\|XP_012086040.1\|	3.1e-58	63.10	PREDICTED: uncharacterized protein LOC105645131 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007493	DUF538

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005773	vacuole
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G000370.1	CmaCh20G000370.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	GENE3D	G3DSA:2.30.240.10		coord: 25..151 score: 5.3
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 37..144 score: 7.6
IPR007493	Protein of unknown function DUF538	unknown	SSF141562	At5g01610-like	coord: 13..151 score: 9.68
None	No IPR available	PANTHER	PTHR31676	FAMILY NOT NAMED	coord: 6..174 score: 4.8
None	No IPR available	PANTHER	PTHR31676:SF12	SUBFAMILY NOT NAMED	coord: 6..174 score: 4.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh20G000370	Cucsa.153250	Cucumber (Gy14) v1	cgycmaB0423
CmaCh20G000370	Cla003173	Watermelon (97103) v1	cmawmB531
CmaCh20G000370	Csa4G280550	Cucumber (Chinese Long) v2	cmacuB549
CmaCh20G000370	MELO3C014673	Melon (DHL92) v3.5.1	cmameB521
CmaCh20G000370	ClCG02G023930	Watermelon (Charleston Gray)	cmawcgB489
CmaCh20G000370	CSPI04G13070	Wild cucumber (PI 183967)	cmacpiB554
CmaCh20G000370	CmoCh02G012420	Cucurbita moschata (Rifu)	cmacmoB555
CmaCh20G000370	CmoCh20G000380	Cucurbita moschata (Rifu)	cmacmoB550
CmaCh20G000370	Lsi10G009750	Bottle gourd (USVL1VR-Ls)	cmalsiB500
CmaCh20G000370	Cp4.1LG16g09250	Cucurbita pepo (Zucchini)	cmacpeB564
CmaCh20G000370	Cp4.1LG05g05390	Cucurbita pepo (Zucchini)	cmacpeB586
CmaCh20G000370	MELO3C014673.2	Melon (DHL92) v3.6.1	cmamedB598
CmaCh20G000370	CsaV3_4G023420	Cucumber (Chinese Long) v3	cmacucB0660
CmaCh20G000370	Cla97C02G050100	Watermelon (97103) v2	cmawmbB577
CmaCh20G000370	Bhi10G000341	Wax gourd	cmawgoB0693
CmaCh20G000370	CsGy4G012640	Cucumber (Gy14) v2	cgybcmaB522
CmaCh20G000370	Carg02750	Silver-seed gourd	carcmaB1267

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh20G000370	CmaCh02G012070	Cucurbita maxima (Rimu)	cmacmaB470

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh20G000370	Silver-seed gourd	carcmaB0732
CmaCh20G000370	Cucumber (Chinese Long) v3	cmacucB0647
CmaCh20G000370	Cucurbita maxima (Rimu)	cmacmaB111
CmaCh20G000370	Cucumber (Gy14) v1	cgycmaB0398
CmaCh20G000370	Cucurbita moschata (Rifu)	cmacmoB538
CmaCh20G000370	Wild cucumber (PI 183967)	cmacpiB543
CmaCh20G000370	Cucurbita pepo (Zucchini)	cmacpeB567