CmaCh19G009830 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCCTCCGCCTCCCTCAAGTGGTGGACAACTTTTTGCATTTAAGAAGATAAATATAAAATAATATTTAAAAGTCGGACCGATTTTTAAAATATGTATTTTTATTTTTTTAATTCGTTTAAATTTTTAACCCTAAATACTGTTCTGAGGCCCAAGTAAGTGCAGCAAAGTCAGGCCCAGGCCCTAATATTTGGACCGATGCGAGGGCCCATTTTGAATGGGCCACATTGTGAAATGACTCTTTTATCCTTCAAGATGTAGAAATCATACTCCGTTCTTCGGGTAACAAATTGGCAAATTCCAAATATATTGGATAAAAAGACCGAAAAGGGCTCAATTTCTCAAGACTGTCGAGATTTGGGAGTTGAGAGCAATGATAGTGTTGATACAGCAACTGCCTCAGCTTCATTTTACAGGCGCCAAGCGGGAAGGATTCGGCTATTCAAATTTACGCTCCGTTCCCCATCAATGGAATTTCAAATTCAATTCTAAAGCCTCGTGGAAGTGCTTTTGCAACAAGAACGAAACTATCCATGATGCCTCTCAGGTGAATCCGATAATTTCTTTATGTTTCTACTTTTGAGTATCGCTGATTGTCAAGAAATTCTTATTGAAATGTTTTGTTTTCAATTCGATGCGTTGTTTGTGTGTGCGTGTGTTCATTTCCAAGTCCGACTGCGATTTTCTGATTTGATTTAGGGTTTTTCTGCTCTGCCACGGGATGCTCCTTGGGATAATGCTACTGCTTGGAGTACAATGGCTCTTTACATTTTCAGCTTGCATATTCCTTTGAGCTTTGGAAGCTTGTCTCTCGTTTCCCAATTAATGCGCATACCTGTTCTTGATCCTCAAACTAAGGTTAGTGCTTATTTGGATGGTATGAAACCATGTGAGATTTGGAGAGTAGAACGAAACATTCTTTATAACGGTGTGAAAATCTCTCTCTATCCCTAGTAGAGGTAGACACGTTTTAAAACTTTGAGGGGAAGTCCGAAAGTGAAAGTCCAAAGAGGACAATATTTGCTAACGGTGGGCTCGGACGATTATAAACCATGACTCAATCTTTAGTACACTTTGGAAGATGGGTTTGGCTTGAATTTCAAAATGCTCGAGGTTTATGTCATCATTGGTAGCCTTTGTGATTATGTTTAACATAGCGTTGTTGAGGATTATTGAAAGAAGTAGTCCTGCATTGGTTAATTAAGAGGAAGATCATGGGTTTATAAGTAAGGAACACTATATTTATTGGTACAAGACCTTTTGAGAAACCAAAGACAAAGCAATGAAAATTTATGCTCAAAGTGGACAATATCATACCATTGTGAAGAGCCGTGATTTCTAATAAGCGTTTGGTCTCTTTTTTGTTGGCTCACTTCTAGCTTGTTCATTCCCAATGCAGGCTCTATCAAGGCTTGGAATTCAAACTATTGAGTTCATTGTGACCGTTCTTCTACTAAAGGTCACTGCGAAACCAAACTACAGATTCAGAAACTTCTTTAGAGACCATAACTTAGGCGGCAAAAGGAATTGGCTATTTGCATCAGCTTTTGGATTTGGGTTCCTCGTGTCATTAGTTTTCCTTACATCAATTCTTGCAGAAACAGTGATTGGACCGAAGGTTAGCATTGTTCTGTTTCCATAATTTACAGTTCAAAAGATGTGATTTCTTGTTTACAGTTCCACTGAATTGCAGGCTGTAAACAGCCCTGTGCTGAAGGAGATTCTTGACAGCAGCAACATCTCAAGAGCAGCATGCTTCATAGGGTACTGTGTTGTGACACCCTTCTTGGAAGAGACTGTTTACAGAGGCTTTCTATTGGCATCAATATCATCAGAGATGCAATGGCAGCAAGCTGTTCTCGTCAGCTCCGCGGTCTTCAGTGCAGCTCACTTGTCTGGTGAAAATTCTGTACAACTCTTCATCATTGGGTGTGTCCTAGGATGCTCGTACTGTTGGACTGGCAATTTAAGGTCTTCAATCCTCATACATTCCTTGTACAATGCAATGACCCTTCTTTTAACTTACCTATCCTAATGACTACTTACATTTCTTCCTAATTCTACTTCACGTGTGACTTGTGCTGGCTTTATATAACCTTGTCATCATTTGTCATTTGTCATCATTGGGTGTGTTGCCTTGTCATACTTGGTTGCTTGTAATAGCCTAAACCCACCGTTAGCAAATATTGTACTTGTTGGGTTTTTCCTTCCCCTCAAGGTTTTTAAAATGTATCTA ATGGCGGCCTCCGCCTCCCTCAAGTGACCGAAAAGGGCTCAATTTCTCAAGACTGTCGAGATTTGGGAGTTGAGAGCAATGATAGTGTTGATACAGCAACTGCCTCAGCTTCATTTTACAGGCGCCAAGCGGGAAGGATTCGGCTATTCAAATTTACGCTCCGTTCCCCATCAATGGAATTTCAAATTCAATTCTAAAGCCTCGTGGAAGTGCTTTTGCAACAAGAACGAAACTATCCATGATGCCTCTCAGGCTCTATCAAGGCTTGGAATTCAAACTATTGAGTTCATTGTGACCGTTCTTCTACTAAAGGTCACTGCGAAACCAAACTACAGATTCAGAAACTTCTTTAGAGACCATAACTTAGGCGGCAAAAGGAATTGGCTATTTGCATCAGCTTTTGGATTTGGGTTCCTCGTGTCATTAGTTTTCCTTACATCAATTCTTGCAGAAACAGTGATTGGACCGAAGGCTGTAAACAGCCCTGTGCTGAAGGAGATTCTTGACAGCAGCAACATCTCAAGAGCAGCATGCTTCATAGGGTACTGTGTTGTGACACCCTTCTTGGAAGAGACTGTTTACAGAGGCTTTCTATTGGCATCAATATCATCAGAGATGCAATGGCAGCAAGCTGTTCTCGTCAGCTCCGCGGTCTTCAGTGCAGCTCACTTGTCTGGTGAAAATTCTGTACAACTCTTCATCATTGGGTGTGTCCTAGGATGCTCGTACTGTTGGACTGGCAATTTAAGGTCTTCAATCCTCATACATTCCTTGTACAATGCAATGACCCTTCTTTTAACTTACCTATCCTAATGACTACTTACATTTCTTCCTAATTCTACTTCACGTGTGACTTGTGCTGGCTTTATATAACCTTGTCATCATTTGTCATTTGTCATCATTGGGTGTGTTGCCTTGTCATACTTGGTTGCTTGTAATAGCCTAAACCCACCGTTAGCAAATATTGTACTTGTTGGGTTTTTCCTTCCCCTCAAGGTTTTTAAAATGTATCTA ATGATAGTGTTGATACAGCAACTGCCTCAGCTTCATTTTACAGGCGCCAAGCGGGAAGGATTCGGCTATTCAAATTTACGCTCCGTTCCCCATCAATGGAATTTCAAATTCAATTCTAAAGCCTCGTGGAAGTGCTTTTGCAACAAGAACGAAACTATCCATGATGCCTCTCAGGCTCTATCAAGGCTTGGAATTCAAACTATTGAGTTCATTGTGACCGTTCTTCTACTAAAGGTCACTGCGAAACCAAACTACAGATTCAGAAACTTCTTTAGAGACCATAACTTAGGCGGCAAAAGGAATTGGCTATTTGCATCAGCTTTTGGATTTGGGTTCCTCGTGTCATTAGTTTTCCTTACATCAATTCTTGCAGAAACAGTGATTGGACCGAAGGCTGTAAACAGCCCTGTGCTGAAGGAGATTCTTGACAGCAGCAACATCTCAAGAGCAGCATGCTTCATAGGGTACTGTGTTGTGACACCCTTCTTGGAAGAGACTGTTTACAGAGGCTTTCTATTGGCATCAATATCATCAGAGATGCAATGGCAGCAAGCTGTTCTCGTCAGCTCCGCGGTCTTCAGTGCAGCTCACTTGTCTGGTGAAAATTCTGTACAACTCTTCATCATTGGGTGTGTCCTAGGATGCTCGTACTGTTGGACTGGCAATTTAAGGTCTTCAATCCTCATACATTCCTTGTACAATGCAATGACCCTTCTTTTAACTTACCTATCCTAA MIVLIQQLPQLHFTGAKREGFGYSNLRSVPHQWNFKFNSKASWKCFCNKNETIHDASQALSRLGIQTIEFIVTVLLLKVTAKPNYRFRNFFRDHNLGGKRNWLFASAFGFGFLVSLVFLTSILAETVIGPKAVNSPVLKEILDSSNISRAACFIGYCVVTPFLEETVYRGFLLASISSEMQWQQAVLVSSAVFSAAHLSGENSVQLFIIGCVLGCSYCWTGNLRSSILIHSLYNAMTLLLTYLS
BLAST of CmaCh19G009830 vs. TrEMBL
Match: A0A0A0K4Q9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G291730 PE=4 SV=1) HSP 1 Score: 346.3 bits (887), Expect = 3.1e-92 Identity = 194/301 (64.45%), Postives = 216/301 (71.76%), Query Frame = 1
BLAST of CmaCh19G009830 vs. TrEMBL
Match: M5W021_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016497mg PE=4 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 1.1e-68 Identity = 133/187 (71.12%), Postives = 161/187 (86.10%), Query Frame = 1
BLAST of CmaCh19G009830 vs. TrEMBL
Match: F6H5A8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g03910 PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 3.2e-65 Identity = 130/192 (67.71%), Postives = 158/192 (82.29%), Query Frame = 1
BLAST of CmaCh19G009830 vs. TrEMBL
Match: W9RAJ8_9ROSA (Clathrin light chain 1 OS=Morus notabilis GN=L484_011578 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 3.0e-63 Identity = 128/188 (68.09%), Postives = 153/188 (81.38%), Query Frame = 1
BLAST of CmaCh19G009830 vs. TrEMBL
Match: U5FIX5_POPTR (CAAX amino terminal protease family protein OS=Populus trichocarpa GN=POPTR_0019s13250g PE=4 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 1.3e-61 Identity = 124/188 (65.96%), Postives = 151/188 (80.32%), Query Frame = 1
BLAST of CmaCh19G009830 vs. TAIR10
Match: AT2G20725.1 (AT2G20725.1 CAAX amino terminal protease family protein) HSP 1 Score: 186.0 bits (471), Expect = 2.7e-47 Identity = 95/192 (49.48%), Postives = 134/192 (69.79%), Query Frame = 1
BLAST of CmaCh19G009830 vs. TAIR10
Match: AT1G14270.1 (AT1G14270.1 CAAX amino terminal protease family protein) HSP 1 Score: 75.1 bits (183), Expect = 6.7e-14 Identity = 53/150 (35.33%), Postives = 84/150 (56.00%), Query Frame = 1
BLAST of CmaCh19G009830 vs. TAIR10
Match: AT5G60750.1 (AT5G60750.1 CAAX amino terminal protease family protein) HSP 1 Score: 58.5 bits (140), Expect = 6.5e-09 Identity = 48/146 (32.88%), Postives = 72/146 (49.32%), Query Frame = 1
BLAST of CmaCh19G009830 vs. NCBI nr
Match: gi|659123930|ref|XP_008461909.1| (PREDICTED: uncharacterized protein LOC103500400 isoform X2 [Cucumis melo]) HSP 1 Score: 386.3 bits (991), Expect = 3.8e-104 Identity = 200/247 (80.97%), Postives = 218/247 (88.26%), Query Frame = 1
BLAST of CmaCh19G009830 vs. NCBI nr
Match: gi|778726480|ref|XP_011659105.1| (PREDICTED: uncharacterized protein LOC101217192 isoform X2 [Cucumis sativus]) HSP 1 Score: 370.9 bits (951), Expect = 1.7e-99 Identity = 194/248 (78.23%), Postives = 216/248 (87.10%), Query Frame = 1
BLAST of CmaCh19G009830 vs. NCBI nr
Match: gi|449443851|ref|XP_004139689.1| (PREDICTED: uncharacterized protein LOC101217192 isoform X1 [Cucumis sativus]) HSP 1 Score: 346.3 bits (887), Expect = 4.4e-92 Identity = 194/301 (64.45%), Postives = 216/301 (71.76%), Query Frame = 1
BLAST of CmaCh19G009830 vs. NCBI nr
Match: gi|659123928|ref|XP_008461908.1| (PREDICTED: uncharacterized protein LOC103500400 isoform X1 [Cucumis melo]) HSP 1 Score: 317.0 bits (811), Expect = 2.9e-83 Identity = 162/188 (86.17%), Postives = 177/188 (94.15%), Query Frame = 1
BLAST of CmaCh19G009830 vs. NCBI nr
Match: gi|731408730|ref|XP_010656965.1| (PREDICTED: uncharacterized protein LOC100265959 isoform X2 [Vitis vinifera]) HSP 1 Score: 273.9 bits (699), Expect = 2.8e-70 Identity = 140/213 (65.73%), Postives = 174/213 (81.69%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |