CmaCh19G009160 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh19G009160
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Glycine-rich cell wall structural protein 1, putative
Location	Cma_Chr19 : 8250902 .. 8251909 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGGCTCTCCAAAATGGGTTTCTCTTGGTCTTCTTACCCTCTGCATTGTGCTCCATTTGAGTGCTATTGCTCTTGGAGATGACAAGCTTGATAAGAGTAGGTTCAGGGATGATGACTGTTGGGGCAGGCGCTGCGGTGGCAGATTTGGAGGACGTGGACCTCGTTTCGGTAGGGGAGGTGGTTTTGGTGGCGGGAGAGGTGGTGGATTTGGTGGTGGTAGAGGTGGAGGACTTGGTGGTGGATCGGGTGGAGGGTTTGGAGGTGGCGGGGGAGTAGGTGGCGGTGGAGGAGGTGGAATTGGTGGAGGTGGTGGTCTTGGAGGTGGTGCTGGTGGTGGAGGTGGACTTGGTGGAGGAGGCGGTGGGGGTATTGGCGGTGGATCTGGTCACGGTGGTGGTTTTGGAGCAGGAGGAGGTGTTGGTGGAGGCGCTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCGGAGGTGGCATTGGTGGTGGGTCAGGTCATGGTGGAGGCTTTGGAGCTGGAGGAGGTGTTGGTGGTGGAATTGGTGGAGGTGCAGGAGGAGGAGGAGGTGGTGGTGGTGGAGGAGGTGGTGGCATTGGTGGTGGATCAGGCCATGGTGGAGGCTTTGGAGCCGGCGGAGGTGTAGGTGGTGGTGGTCTCGGCGGAGGAGGAGGTGGTGGTGGTGGTCTGGGAGGAGGTTCTGGTCATGGAGGTGGATTTGGAGCCGGTGGAGGAATCGGAGGAGGTGGAGGAGCCGGAGGAGGAGGTGGGTTAGGAGGAGGTGGGTTAGGAGGAGGTTCTGGAGGTGGTCACGGAGGAGGGTTTGGAATCGGAATAGGTATTGGAGTAGGAATAGGTGGTGGATCTGGTCATGGCGTGGGAGTGGGGTCTGGGTCTGGTGGAGGAGGTGGTGGCGGTCATTAA

mRNA sequence

ATGGGTGGCTCTCCAAAATGGGTTTCTCTTGGTCTTCTTACCCTCTGCATTGTGCTCCATTTGAGTGCTATTGCTCTTGGAGATGACAAGCTTGATAAGAGTAGGTTCAGGGATGATGACTGTTGGGGCAGGCGCTGCGGTGGCAGATTTGGAGGACGTGGACCTCGTTTCGGTAGGGGAGGTGGTTTTGGTGGCGGGAGAGGTGGTGGATTTGGTGGTGGTAGAGGTGGAGGACTTGGTGGTGGATCGGGTGGAGGGTTTGGAGGTGGCGGGGGAGTAGGTGGCGGTGGAGGAGGTGGAATTGGTGGAGGTGGTGGTCTTGGAGGTGGTGCTGGTGGTGGAGGTGGACTTGGTGGAGGAGGCGGTGGGGGTATTGGCGGTGGATCTGGTCACGGTGGTGGTTTTGGAGCAGGAGGAGGTGTTGGTGGAGGCGCTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCGGAGGTGGCATTGGTGGTGGGTCAGGTCATGGTGGAGGCTTTGGAGCTGGAGGAGGTGTTGGTGGTGGAATTGGTGGAGGTGCAGGAGGAGGAGGAGGTGGTGGTGGTGGAGGAGGTGGTGGCATTGGTGGTGGATCAGGCCATGGTGGAGGCTTTGGAGCCGGCGGAGGTGTAGGTGGTGGTGGTCTCGGCGGAGGAGGAGGTGGTGGTGGTGGTCTGGGAGGAGGTTCTGGTCATGGAGGTGGATTTGGAGCCGGTGGAGGAATCGGAGGAGGTGGAGGAGCCGGAGGAGGAGGTGGGTTAGGAGGAGGTGGGTTAGGAGGAGGTTCTGGAGGTGGTCACGGAGGAGGGTTTGGAATCGGAATAGGTATTGGAGTAGGAATAGGTGGTGGATCTGGTCATGGCGTGGGAGTGGGGTCTGGGTCTGGTGGAGGAGGTGGTGGCGGTCATTAA

Coding sequence (CDS)

ATGGGTGGCTCTCCAAAATGGGTTTCTCTTGGTCTTCTTACCCTCTGCATTGTGCTCCATTTGAGTGCTATTGCTCTTGGAGATGACAAGCTTGATAAGAGTAGGTTCAGGGATGATGACTGTTGGGGCAGGCGCTGCGGTGGCAGATTTGGAGGACGTGGACCTCGTTTCGGTAGGGGAGGTGGTTTTGGTGGCGGGAGAGGTGGTGGATTTGGTGGTGGTAGAGGTGGAGGACTTGGTGGTGGATCGGGTGGAGGGTTTGGAGGTGGCGGGGGAGTAGGTGGCGGTGGAGGAGGTGGAATTGGTGGAGGTGGTGGTCTTGGAGGTGGTGCTGGTGGTGGAGGTGGACTTGGTGGAGGAGGCGGTGGGGGTATTGGCGGTGGATCTGGTCACGGTGGTGGTTTTGGAGCAGGAGGAGGTGTTGGTGGAGGCGCTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCGGAGGTGGCATTGGTGGTGGGTCAGGTCATGGTGGAGGCTTTGGAGCTGGAGGAGGTGTTGGTGGTGGAATTGGTGGAGGTGCAGGAGGAGGAGGAGGTGGTGGTGGTGGAGGAGGTGGTGGCATTGGTGGTGGATCAGGCCATGGTGGAGGCTTTGGAGCCGGCGGAGGTGTAGGTGGTGGTGGTCTCGGCGGAGGAGGAGGTGGTGGTGGTGGTCTGGGAGGAGGTTCTGGTCATGGAGGTGGATTTGGAGCCGGTGGAGGAATCGGAGGAGGTGGAGGAGCCGGAGGAGGAGGTGGGTTAGGAGGAGGTGGGTTAGGAGGAGGTTCTGGAGGTGGTCACGGAGGAGGGTTTGGAATCGGAATAGGTATTGGAGTAGGAATAGGTGGTGGATCTGGTCATGGCGTGGGAGTGGGGTCTGGGTCTGGTGGAGGAGGTGGTGGCGGTCATTAA

Protein sequence

MGGSPKWVSLGLLTLCIVLHLSAIALGDDKLDKSRFRDDDCWGRRCGGRFGGRGPRFGRGGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGGGGGGGIGGGGGLGGGAGGGGGLGGGGGGGIGGGSGHGGGFGAGGGVGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGIGGGSGHGGGFGAGGGVGGGIGGGAGGGGGGGGGGGGGIGGGSGHGGGFGAGGGVGGGGLGGGGGGGGGLGGGSGHGGGFGAGGGIGGGGGAGGGGGLGGGGLGGGSGGGHGGGFGIGIGIGVGIGGGSGHGVGVGSGSGGGGGGGH

Homology

[Close]

BLAST of CmaCh19G009160 vs. Swiss-Prot
Match: GRP1_PETHY (Glycine-rich cell wall structural protein 1 OS=Petunia hybrida GN=GRP-1 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.3e-06
Identity = 261/384 (67.97%), Postives = 279/384 (72.66%), Query Frame = 1


Query: 1   MGGSPKWVSLGLLTLCIVLHLSAIALGDDKLDKSRFRDDDCWG---RRCGG-RFGGRGPR 60
           MG S KWV   LL   I   L+AI L DDKL++SR+ +D+  G   R CGG RFGGRGP 
Sbjct: 1   MGSSQKWVIGLLLFSSIFFELTAITLADDKLEESRWGNDNGCGFGRRGCGGGRFGGRGPS 60

Query: 61  FGRG----GGFGGGRGGGFGGGRGGG----------------------------LGGGSG 120
           FGRG    GGFGGG GGG GGG GGG                             GGG+G
Sbjct: 61  FGRGRGAGGGFGGGAGGGAGGGLGGGGGLGGGGGAGGGGGLGGGGGAGGGFGGGAGGGAG 120

Query: 121 GGFGGGGGVGGGGGGGIGGGGGLGGGAGGGGGLGGGGGGGIGGGSGHGGGFGAGGGVGGG 180
           GG GGGGG+GGGGGGG GGGGG+GGGAG GGG G GGG  +GGG+G GGG G GGG GGG
Sbjct: 121 GGLGGGGGLGGGGGGGAGGGGGVGGGAGSGGGFGAGGG--VGGGAGAGGGVGGGGGFGGG 180

Query: 181 AGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGIGGGSGHGGGFGAG 240
            GGG GGG G GGG G GGG GGG GGG  GG GGGGGGG GGGGGIGGGSGHGGGFGAG
Sbjct: 181 GGGGVGGGSGHGGGFGAGGGVGGGAGGGLGGGVGGGGGGGSGGGGGIGGGSGHGGGFGAG 240

Query: 241 GGVGGGIGGGA----GGGGGGGGGGGGGIGGGSGHGGGFGAGGGVGGGGLGG-------G 300
           GGVGGG+GGGA    GGGGGGGGGGGGG+GGGSGHGGGFGAGGGVGGG  GG       G
Sbjct: 241 GGVGGGVGGGAAGGGGGGGGGGGGGGGGLGGGSGHGGGFGAGGGVGGGAAGGVGGGGGFG 300

Query: 301 GGGGGGLGGGSGHGGGFGAGGGIGGGGGAGGGGGLGGGGLGGGSGGGHGGGF--GIGIGI 334
           GGGGGG+GGGSGHGGGFGAGGG+GGG G G GGG GG G GGG GGGHGGGF  G+GIGI
Sbjct: 301 GGGGGGVGGGSGHGGGFGAGGGVGGGAGGGLGGG-GGAGGGGGIGGGHGGGFGVGVGIGI 360

[Close]

BLAST of CmaCh19G009160 vs. TrEMBL
Match: A0A0A0K3J8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G043560 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 5.8e-25
Identity = 284/345 (82.32%), Postives = 290/345 (84.06%), Query Frame = 1


Query: 1   MGGSPKWVSLGLLTLCIVLHLSAIALGDDKLDKSRFRDDD-C-WGRRCGGRFGGRGPRF- 60
           MGGS KW SLGLLTLCIVLHLSAI LGDDKL+K+ FRDDD C WGRRCGGRFGGRG    
Sbjct: 1   MGGSQKWFSLGLLTLCIVLHLSAIVLGDDKLNKNGFRDDDDCRWGRRCGGRFGGRGRGGF 60

Query: 61  --GRGGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGGGGGGGIGGGGGLGGGAGGGG 120
             GRGGGFGGGRGGG GGGRGGGLGGGSGGGFGGGGGVGGG GGG+GGGGG GGG GGG 
Sbjct: 61  GGGRGGGFGGGRGGGLGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVGGGGGFGGGGGGGL 120

Query: 121 GLGGGGGGGIGGG--SGHGGGFGAGGGVGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGG 180
           G G G GGG GGG   G GGG G GGG GGG GGG GGG G GGG G GGG GGG GGG 
Sbjct: 121 GGGSGHGGGFGGGVGGGAGGGVGGGGGFGGGGGGGVGGGSGHGGGIGAGGGVGGGVGGGA 180

Query: 181 GGGGGGGGGGGGGGGIGGGSGHGGGFGAGGGVGGGIGGGA--GGGGGGGGGGGGGIGGGS 240
           GGGGGGGGGGGGGGGIGG  GHGGGFGAGGGVGGG+GGGA  GGGGGGGGGGGGGIGGGS
Sbjct: 181 GGGGGGGGGGGGGGGIGG--GHGGGFGAGGGVGGGVGGGAGGGGGGGGGGGGGGGIGGGS 240

Query: 241 GHGGGFGAGGGVG---GGGLGGGGGGGGGLGGGSGHGGGFGAGGGIGGGGGAGGGGGLGG 300
           GHGGGFGAGGGVG   GGG GGGGGGGGG GGG G GGG G GGG GGGGG GGG G GG
Sbjct: 241 GHGGGFGAGGGVGGGIGGGAGGGGGGGGGGGGGGGLGGGSGHGGGFGGGGGLGGGAG-GG 300

Query: 301 GGLGGGSGGGHGGGFGIGIGIGVGIGGGSGHGVGVGSGSGGGGGG 334
           GG+GGG+GGGHGGG GIGIGIGVGIGGGSGHGVGVGSGSGGGGGG
Sbjct: 301 GGIGGGAGGGHGGGIGIGIGIGVGIGGGSGHGVGVGSGSGGGGGG 342

[Close]

BLAST of CmaCh19G009160 vs. TrEMBL
Match: B9SFQ6_RICCO (Glycine-rich cell wall structural protein 1, putative OS=Ricinus communis GN=RCOM_1224040 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.9e-16
Identity = 249/343 (72.59%), Postives = 259/343 (75.51%), Query Frame = 1


Query: 1   MGGSPKWVSLGLLTLCIVLHLSAIALGDDKLDKSRFRDDD--C-WGRRCGGRFGGRGPRF 60
           MG   KW+SL LL LCIV HLS +A GDDKLDK+RFR+DD  C WGRRCGGRFG      
Sbjct: 1   MGVFQKWLSLLLLFLCIVSHLSVVAFGDDKLDKTRFRNDDDYCRWGRRCGGRFGR----- 60

Query: 61  GRGGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGGGGGGGIGGGGGLGGGAGGGGGL 120
           GRGGG G  RGGG GGG GGGLGGG  GG GGG G GGG GGG+GGGGG GGG GGGGG 
Sbjct: 61  GRGGGLG--RGGGIGGGAGGGLGGG--GGAGGGLGGGGGAGGGLGGGGGAGGGLGGGGGA 120

Query: 121 GGGGGGGIGGGSGHGGGFGAGGGVGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 180
           GGGGGGGIGGGSGHGGGFGAGGGVGGG                      GGG GGGGGGG
Sbjct: 121 GGGGGGGIGGGSGHGGGFGAGGGVGGGV---------------------GGGAGGGGGGG 180

Query: 181 GGGGGGGGGGGIGGGSGHGGGFGAGGGVGGGI----GGGAGGGGGGGGGGGGGIGGGSGH 240
           GGGGGGGGGGGIGGGSGHGGGFGAGGGVGGG+    GGG GGGGGGGGGGGGGIGGGSGH
Sbjct: 181 GGGGGGGGGGGIGGGSGHGGGFGAGGGVGGGLGGGPGGGGGGGGGGGGGGGGGIGGGSGH 240

Query: 241 GGGFGAGGGVGGGGLGGGGGGGGGLGGGSGHGGGFGAGGGIGGGGGAGGG-GGLGGGGLG 300
           GGGFGAGGGVGGG  GG GGGGGG GGG G GGG G G G GGG GAGGG GG  GGGLG
Sbjct: 241 GGGFGAGGGVGGGIGGGAGGGGGGGGGGGGGGGGVGGGSGHGGGFGAGGGLGGGAGGGLG 300

Query: 301 GGSGGGHGGGFGIGIGIGVGIGGGSGHGVGVGSGSGGGGGGGH 336
           GG  GG G G GIGIGIG+G+G G+G G G G+GSG GGGG H
Sbjct: 301 GGHRGGGGIGVGIGIGIGIGVGAGAGQGTGSGTGSGSGGGGKH 313

[Close]

BLAST of CmaCh19G009160 vs. TrEMBL
Match: A0A067JIW8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01830 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.8e-13
Identity = 233/338 (68.93%), Postives = 247/338 (73.08%), Query Frame = 1


Query: 1   MGGSPKWVSLGLLTLCIVLHLSAIALGDDKLDKSRFRDDD--C-WGRRCGGRFGGRGPRF 60
           MG S   +SL LL +CIV H SA+ALGDDK+D+ RF +DD  C WGRRCGGRFG      
Sbjct: 1   MGVSSTSLSLLLLFICIVSHFSALALGDDKVDEKRFGNDDDYCRWGRRCGGRFGR----- 60

Query: 61  GRGGGFGGGRGGGFGGGRGGGLGG-GSGGGFGGGGGVGGGGGGGIGGGGGLGGGAGGGGG 120
           GRGGG GGG      GGRGG  GG G GGGFG GGGVGGG  GG+GGGGG GGG GGGGG
Sbjct: 61  GRGGGLGGG------GGRGGAGGGFGHGGGFGAGGGVGGGPRGGLGGGGGGGGGGGGGGG 120

Query: 121 LGGGGGGGIGGGSGHGGGFGAGGGVGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 180
              GGGGG+GGGSGHGGGFG GGGVGGG GGG GGGGGGGGGGGGGGGG           
Sbjct: 121 ---GGGGGLGGGSGHGGGFGVGGGVGGGIGGGAGGGGGGGGGGGGGGGG----------- 180

Query: 181 GGGGGGGGGGGGIGGGSGHGGGFGAGGGVGGG-IGGGAGGGGGGGGGGGGGIGGGSGHGG 240
                       +GGGSGHGGGFGAGGGVGGG   GG GGGGGGGGGGGGG+GGGSGHGG
Sbjct: 181 ------------LGGGSGHGGGFGAGGGVGGGGAAGGGGGGGGGGGGGGGGLGGGSGHGG 240

Query: 241 GFGAGGGVGGGGLGGGGGGGGGLGGGSGHGGGFGAGGGIGGGGGAGGGGGLGGGGLGGGS 300
           GFGAGGGVG GG GGGGGGG   GGGSGHGGGFGAGGG+GGG          GGG  GG+
Sbjct: 241 GFGAGGGVGSGGAGGGGGGG---GGGSGHGGGFGAGGGVGGG---------AGGGASGGA 289

Query: 301 GGGHGGGF--GIGIGIGVGIGGGSGHGVGVGSGSGGGG 332
           GGG GGGF  GIGIGIGVG+G G+GHG G GSGSGGGG
Sbjct: 301 GGGRGGGFGVGIGIGIGVGVGAGAGHGSGTGSGSGGGG 289

[Close]

BLAST of CmaCh19G009160 vs. TrEMBL
Match: A0A165Z783_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_012942 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.5e-09
Identity = 249/401 (62.09%), Postives = 263/401 (65.59%), Query Frame = 1


Query: 4   SPKWVSLGLLTLCIVLHLSAIALGDDKLDKSRFRDDDCWGRR-CGGRF----GGRGPRFG 63
           S KW+   +L L IV  LS +A G+ KLD++R+ DDDC GRR CGGR     GGRG R+G
Sbjct: 5   SRKWLC-AVLVLSIVFELSLVAFGEKKLDETRW-DDDCRGRRGCGGRGRYGNGGRGGRYG 64

Query: 64  -RGGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGGGGG--------GGIGGGGGLGG 123
            RGGG GGG GGG GGG GGGLGGG G G GGGGG GGGGG        GG G GGG+GG
Sbjct: 65  GRGGGLGGGGGGGLGGGGGGGLGGGGGLGGGGGGGAGGGGGVGGGSGQGGGFGAGGGVGG 124

Query: 124 GAGGGGGLGGGGGGG------IGGGSGHGGGFGAGGGVGGGA------GGGGGGGGGGGG 183
           G GGGGGLGGGGGGG      +GGGSGHGGGFGAGGGVGGGA      GG          
Sbjct: 125 GVGGGGGLGGGGGGGSGGGGGVGGGSGHGGGFGAGGGVGGGAGGGVGVGG---------- 184

Query: 184 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGIGGGSGHGGGFGAGGGVGGGIGG--GAGG 243
                               GGGGG GGGGGIGGGSGHGGGFGAGGGVGGG GG  G GG
Sbjct: 185 --------------------GGGGGSGGGGGIGGGSGHGGGFGAGGGVGGGAGGGVGVGG 244

Query: 244 GGGGGGGGGGGIGGGSGHGGGFGAGGGVG---------GGGLGGGGGGGGGLGGGSGHGG 303
           GGGGG GGGGGIGGGSGHGGGFGAGGGVG         GGG GGG GGGGG+GGGSGHGG
Sbjct: 245 GGGGGSGGGGGIGGGSGHGGGFGAGGGVGGGAGGGAGVGGGGGGGSGGGGGVGGGSGHGG 304

Query: 304 GFGAGGGI----------GGGGGAGGGGGLGGGGLGGGSG-----GGHGGGFG------- 335
           GFGAGGG+          GGGGG GGGGG GGGGLGGGSG     GG GGG G       
Sbjct: 305 GFGAGGGVGGGVGGAAGGGGGGGGGGGGGGGGGGLGGGSGHGGGIGGGGGGLGGGHGIGG 364

[Close]

BLAST of CmaCh19G009160 vs. TrEMBL
Match: A0A0L9V6U0_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g121600 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.8e-09
Identity = 237/390 (60.77%), Postives = 250/390 (64.10%), Query Frame = 1


Query: 6   KWVSLGLLTLCIVLHLSAIA-LGDDKLDKSRFRDDDCWGR--RC---------------G 65
           KWVSL +L +CIVL LS I  LGD+KLD  R+ DD  +GR  RC               G
Sbjct: 8   KWVSLSVLVMCIVLELSVITVLGDEKLDPQRYGDDCRFGRGPRCRGWGGRRGRGGGLGGG 67

Query: 66  GRFGGRGPRFGRGGGFGGGRGGG--------FGGGRGGGLGGGSG--------GGFGGGG 125
           G FGG G   G GGG GGGRGGG         GGG GGGLGGG G        GGFGGGG
Sbjct: 68  GGFGGGGG-LGGGGGLGGGRGGGGGFGGGGGLGGGGGGGLGGGGGHGGGIGGGGGFGGGG 127

Query: 126 GVGG--------------------GGGGGIGGGGGLGGGAGGGGGLGGGGGGGIGGGSGH 185
           G GG                    GGGG            GGGGG GGGGGGG+GGGSGH
Sbjct: 128 GAGGGHGRGFGAGGGVGGGVEGGIGGGG------------GGGGGGGGGGGGGLGGGSGH 187

Query: 186 GGGFGAGGGVGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGIGG 245
           GGGFGAGGGVGGG                        GGG GGGGGGGGGGGGGGGG+GG
Sbjct: 188 GGGFGAGGGVGGGL-----------------------GGGAGGGGGGGGGGGGGGGGLGG 247

Query: 246 GSGHGGGFGAGGGVGGGIGGGAGGGGGGGGGG----GGGIGGGSGHGGGFGAGGGVG--- 305
           GSGHGGGFGAGGG+GGG+GGGAGGGGGGGGGG    GGGIGGGSGHGGGFGAGGGVG   
Sbjct: 248 GSGHGGGFGAGGGIGGGVGGGAGGGGGGGGGGGGGAGGGIGGGSGHGGGFGAGGGVGGGI 307

Query: 306 GGGLGGGGGGGGGLGGGSGHGGGFGAGGGIGGGGGAGGGGGLGGGGLGGGSGGGHGGGFG 335
           GGG G GGGGGGG+GGGSGHGGGFGAGGGIG G         GGGG+GGG GGGHGGG G
Sbjct: 308 GGGGGAGGGGGGGIGGGSGHGGGFGAGGGIGHG---------GGGGIGGGGGGGHGGGGG 352

[Close]

BLAST of CmaCh19G009160 vs. NCBI nr
Match: gi|778730114|ref|XP_011659702.1| (PREDICTED: glycine-rich cell wall structural protein 1-like [Cucumis sativus])

HSP 1 Score: 122.9 bits (307), Expect = 1.1e-24
Identity = 284/345 (82.32%), Postives = 290/345 (84.06%), Query Frame = 1


Query: 1   MGGSPKWVSLGLLTLCIVLHLSAIALGDDKLDKSRFRDDD-C-WGRRCGGRFGGRGPRF- 60
           MGGS KW SLGLLTLCIVLHLSAI LGDDKL+K+ FRDDD C WGRRCGGRFGGRG    
Sbjct: 1   MGGSQKWFSLGLLTLCIVLHLSAIVLGDDKLNKNGFRDDDDCRWGRRCGGRFGGRGRGGF 60

Query: 61  --GRGGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGGGGGGGIGGGGGLGGGAGGGG 120
             GRGGGFGGGRGGG GGGRGGGLGGGSGGGFGGGGGVGGG GGG+GGGGG GGG GGG 
Sbjct: 61  GGGRGGGFGGGRGGGLGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVGGGGGFGGGGGGGL 120

Query: 121 GLGGGGGGGIGGG--SGHGGGFGAGGGVGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGG 180
           G G G GGG GGG   G GGG G GGG GGG GGG GGG G GGG G GGG GGG GGG 
Sbjct: 121 GGGSGHGGGFGGGVGGGAGGGVGGGGGFGGGGGGGVGGGSGHGGGIGAGGGVGGGVGGGA 180

Query: 181 GGGGGGGGGGGGGGGIGGGSGHGGGFGAGGGVGGGIGGGA--GGGGGGGGGGGGGIGGGS 240
           GGGGGGGGGGGGGGGIGGG  HGGGFGAGGGVGGG+GGGA  GGGGGGGGGGGGGIGGGS
Sbjct: 181 GGGGGGGGGGGGGGGIGGG--HGGGFGAGGGVGGGVGGGAGGGGGGGGGGGGGGGIGGGS 240

Query: 241 GHGGGFGAGGGVG---GGGLGGGGGGGGGLGGGSGHGGGFGAGGGIGGGGGAGGGGGLGG 300
           GHGGGFGAGGGVG   GGG GGGGGGGGG GGG G GGG G GGG GGGGG GGG G GG
Sbjct: 241 GHGGGFGAGGGVGGGIGGGAGGGGGGGGGGGGGGGLGGGSGHGGGFGGGGGLGGGAG-GG 300

Query: 301 GGLGGGSGGGHGGGFGIGIGIGVGIGGGSGHGVGVGSGSGGGGGG 334
           GG+GGG+GGGHGGG GIGIGIGVGIGGGSGHGVGVGSGSGGGGGG
Sbjct: 301 GGIGGGAGGGHGGGIGIGIGIGVGIGGGSGHGVGVGSGSGGGGGG 342

[Close]

BLAST of CmaCh19G009160 vs. NCBI nr
Match: gi|1009121921|ref|XP_015877725.1| (PREDICTED: glycine-rich cell wall structural protein 1-like [Ziziphus jujuba])

HSP 1 Score: 115.5 bits (288), Expect = 1.7e-22
Identity = 231/340 (67.94%), Postives = 242/340 (71.18%), Query Frame = 1


Query: 1   MGGSPKWVSLGLLTLCIVLHLSAIALGDDKLDKSRFRDDDC-WGRRCGGRFGGRGPR--- 60
           M  SPKWVSL LL LCI LHLSAI LGDDKLD++RFRD DC WGRRC GRFGGRGPR   
Sbjct: 1   MDASPKWVSLSLLILCIALHLSAITLGDDKLDETRFRDYDCPWGRRCRGRFGGRGPRGPG 60

Query: 61  FGRGGGFGGGRGGG--FGGGRGGGLGGGSGGGFGGGGGVGGGGGGGIGGG--GGLGGGAG 120
           FGRGGG GGG GGG  FGGG GGGLGGG+GGG G GGG G GGG G GGG  GG GGG G
Sbjct: 61  FGRGGGIGGGAGGGGGFGGGGGGGLGGGAGGGVGVGGGSGHGGGIGAGGGVGGGAGGGVG 120

Query: 121 GGGGLGGGGGGGIGGGSGHGGGFGAGGGVGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGG 180
           GGGG GGGGGGG+GGGSGHGGGFGAGGG+GGGAGGG GGGGGGGGGGGGGGG        
Sbjct: 121 GGGGFGGGGGGGVGGGSGHGGGFGAGGGLGGGAGGGAGGGGGGGGGGGGGGG-------- 180

Query: 181 GGGGGGGGGGGGGGGGIGGGSGHGGGFGAGGGVGGGIGGGAGGGGGGGGGGGGGIGGGSG 240
                           IGGGSGHGGGFGAGGGVGGG GGG         GGGGG+GG   
Sbjct: 181 ----------------IGGGSGHGGGFGAGGGVGGGAGGGL--------GGGGGVGG--- 240

Query: 241 HGGGFGAGGGVGGGGLGGGGGGGGGLGGGSGHGGGFGAGGGIGGGGGAGGGGGLGGGGLG 300
                GAGGGVGGGG G GGGGGGG+G GSGHGGGFGA                     G
Sbjct: 241 -----GAGGGVGGGG-GAGGGGGGGVGVGSGHGGGFGA---------------------G 278

Query: 301 GGSGGGHGGGFGIGIGIGVGIGGGSGHGVGVGSGSGGGGG 333
           GG+GGGHGGGFGIGIGIG+G+G G+GHG G GSGSGGGGG
Sbjct: 301 GGAGGGHGGGFGIGIGIGIGVGAGAGHGSGSGSGSGGGGG 278

[Close]

BLAST of CmaCh19G009160 vs. NCBI nr
Match: gi|743926089|ref|XP_011007199.1| (PREDICTED: glycine-rich cell wall structural protein 1-like [Populus euphratica])

HSP 1 Score: 100.9 bits (250), Expect = 4.4e-18
Identity = 234/362 (64.64%), Postives = 249/362 (68.78%), Query Frame = 1


Query: 4   SPKWVSLGLLTLCIVLHLSAIALGDDKLDKSRFRDDDC-WG-RRCGGRFG-GRGPRFGRG 63
           S KWVS  LL LCIVLHLSAI+LGDDKLD++R+RDDDC W  RRCGGRFG GRG   G G
Sbjct: 6   SSKWVSFLLLLLCIVLHLSAISLGDDKLDQTRYRDDDCRWNPRRCGGRFGRGRGGGLGGG 65

Query: 64  GGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGGGGGGGIGGGGGLGGGAGGGGGLGGG 123
           G    GRGGGFGGG             GGGGG+GGG GGG+          GGGGG GGG
Sbjct: 66  G----GRGGGFGGGA------------GGGGGLGGGAGGGV----------GGGGGFGGG 125

Query: 124 GGGGIGGGSGHGGGFGAGGGVGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 183
           GG G+GGG+GHGGGFGAGGGVGG  GGG GGGGG                          
Sbjct: 126 GGRGVGGGTGHGGGFGAGGGVGGRGGGGAGGGGG-------------------------- 185

Query: 184 GGGGGGGGIGGGSGHGGGFGAGGGVGGGIGG-GAGGGGGGGGGGGGGIGGGSGHGGGFGA 243
            GGGGGGG+GGGSGHGGGFGAGGGVGGG GG G  GGGGGGGGGGGGIGGGSGHGGGFGA
Sbjct: 186 FGGGGGGGVGGGSGHGGGFGAGGGVGGGAGGAGGAGGGGGGGGGGGGIGGGSGHGGGFGA 245

Query: 244 GGGVG-------GGGLGGGGGGGGGLGGGSGHGGGFGAGGGIGG------GGGAGGGGGL 303
           GGGVG       GGG GGGGGGGGGLGGGSGHGGGFGAGGG+GG      GGGAGGGGG+
Sbjct: 246 GGGVGGGSGGAAGGGGGGGGGGGGGLGGGSGHGGGFGAGGGLGGGAGGGLGGGAGGGGGV 305

Query: 304 -----------------GGGGLGGGSGGGHGGGFGIGIGIGVGIGGGSGHGVGVGSGSGG 332
                            GGGG+GGG GGG GGGFG+GIGIGVG+G G+GHG G GSG GG
Sbjct: 306 GGGHGGGAGGGLGGGAGGGGGVGGGHGGGAGGGFGVGIGIGVGVGAGAGHGSGSGSGGGG 315

[Close]

BLAST of CmaCh19G009160 vs. NCBI nr
Match: gi|985435902|ref|XP_015382991.1| (PREDICTED: glycine-rich cell wall structural protein 1-like [Citrus sinensis])

HSP 1 Score: 100.1 bits (248), Expect = 7.6e-18
Identity = 239/342 (69.88%), Postives = 257/342 (75.15%), Query Frame = 1


Query: 1   MGGSPKWVSLGLLTLCIVLHLSAIALGDDKLDKSRFRDDDC-WGRR-CGGRFGGRGPRFG 60
           MG   KW+SL L+ LCI LHLSAI L DDK+DK+R+RDDDC W RR CGGRFGGRGPRFG
Sbjct: 1   MGLPQKWLSLVLIFLCIALHLSAITLADDKVDKARWRDDDCRWNRRHCGGRFGGRGPRFG 60

Query: 61  RGGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGGGGGGGIGGGGGLGGGAGGG---- 120
            GGG GGG  GGFGGGRGGG+GGG+GGG GGGGG GGG GGG GGGGG+GGGAGGG    
Sbjct: 61  -GGGVGGG--GGFGGGRGGGIGGGAGGGIGGGGGAGGGIGGGAGGGGGIGGGAGGGIGGG 120

Query: 121 --GGLGGGGGGGIGGGSGHGGGFGAGGGVGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGG 180
             GG G GGGGG+GGGSGHGGGFGAGGGVGGGAGGG GGG       GG           
Sbjct: 121 AGGGGGAGGGGGVGGGSGHGGGFGAGGGVGGGAGGGLGGGA------GG----------- 180

Query: 181 GGGGGGGGGGGGGGGGIGGGSGHGGGFGAGGGVGGGIGGGAGGGGGGGGGGGGGIGGGSG 240
                GGGGGGGGGGG+GGGSGHGGGFGAGGGVGGG+GGG+  G GGG G GGG+GG   
Sbjct: 181 -----GGGGGGGGGGGLGGGSGHGGGFGAGGGVGGGLGGGS--GHGGGFGAGGGVGG--- 240

Query: 241 HGGGFGAGGGVGGGGLGGGGGGGGGLGGGSGHGGGFGAGGGIGGGGGAGGGGGLGGGGLG 300
                GAGGG+GGGG G GGGGGGG+GGGSGHGGGFGAGGG+GGG G G GG        
Sbjct: 241 -----GAGGGIGGGG-GAGGGGGGGIGGGSGHGGGFGAGGGVGGGSGGGHGG-------- 295

Query: 301 GGSGGGHGGGFGIGIGIGVGIGGGSGHGVGVGSGSGGGGGGG 335
               GGHGGG GIGIGIG+G+GGGSG GVG GSGSG GGGGG
Sbjct: 301 ---HGGHGGGVGIGIGIGIGVGGGSGKGVGTGSGSGSGGGGG 295

[Close]

BLAST of CmaCh19G009160 vs. NCBI nr
Match: gi|223535885|gb|EEF37545.1| (Glycine-rich cell wall structural protein 1 precursor, putative [Ricinus communis])

HSP 1 Score: 94.4 bits (233), Expect = 4.2e-16
Identity = 249/343 (72.59%), Postives = 259/343 (75.51%), Query Frame = 1


Query: 1   MGGSPKWVSLGLLTLCIVLHLSAIALGDDKLDKSRFRDDD--C-WGRRCGGRFGGRGPRF 60
           MG   KW+SL LL LCIV HLS +A GDDKLDK+RFR+DD  C WGRRCGGRFG      
Sbjct: 1   MGVFQKWLSLLLLFLCIVSHLSVVAFGDDKLDKTRFRNDDDYCRWGRRCGGRFGR----- 60

Query: 61  GRGGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGGGGGGGIGGGGGLGGGAGGGGGL 120
           GRGGG G  RGGG GGG GGGLGGG  GG GGG G GGG GGG+GGGGG GGG GGGGG 
Sbjct: 61  GRGGGLG--RGGGIGGGAGGGLGGG--GGAGGGLGGGGGAGGGLGGGGGAGGGLGGGGGA 120

Query: 121 GGGGGGGIGGGSGHGGGFGAGGGVGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 180
           GGGGGGGIGGGSGHGGGFGAGGGVGGG                      GGG GGGGGGG
Sbjct: 121 GGGGGGGIGGGSGHGGGFGAGGGVGGGV---------------------GGGAGGGGGGG 180

Query: 181 GGGGGGGGGGGIGGGSGHGGGFGAGGGVGGGI----GGGAGGGGGGGGGGGGGIGGGSGH 240
           GGGGGGGGGGGIGGGSGHGGGFGAGGGVGGG+    GGG GGGGGGGGGGGGGIGGGSGH
Sbjct: 181 GGGGGGGGGGGIGGGSGHGGGFGAGGGVGGGLGGGPGGGGGGGGGGGGGGGGGIGGGSGH 240

Query: 241 GGGFGAGGGVGGGGLGGGGGGGGGLGGGSGHGGGFGAGGGIGGGGGAGGG-GGLGGGGLG 300
           GGGFGAGGGVGGG  GG GGGGGG GGG G GGG G G G GGG GAGGG GG  GGGLG
Sbjct: 241 GGGFGAGGGVGGGIGGGAGGGGGGGGGGGGGGGGVGGGSGHGGGFGAGGGLGGGAGGGLG 300

Query: 301 GGSGGGHGGGFGIGIGIGVGIGGGSGHGVGVGSGSGGGGGGGH 336
           GG  GG G G GIGIGIG+G+G G+G G G G+GSG GGGG H
Sbjct: 301 GGHRGGGGIGVGIGIGIGIGVGAGAGQGTGSGTGSGSGGGGKH 313

The following BLAST results are available for this feature:

BLAST of CmaCh19G009160 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GRP1_PETHY	1.3e-06	67.97	Glycine-rich cell wall structural protein 1 OS=Petunia hybrida GN=GRP-1 PE=1 SV=...	[more]

BLAST of CmaCh19G009160 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3J8_CUCSA	5.8e-25	82.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G043560 PE=4 SV=1	[more]
B9SFQ6_RICCO	2.9e-16	72.59	Glycine-rich cell wall structural protein 1, putative OS=Ricinus communis GN=RCO...	[more]
A0A067JIW8_JATCU	1.8e-13	68.93	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01830 PE=4 SV=1	[more]
A0A165Z783_DAUCA	1.5e-09	62.09	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_012942 PE=4 SV=1	[more]
A0A0L9V6U0_PHAAN	5.8e-09	60.77	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g121600 PE=4 SV=1	[more]

BLAST of CmaCh19G009160 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmaCh19G009160 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778730114\|ref\|XP_011659702.1\|	1.1e-24	82.32	PREDICTED: glycine-rich cell wall structural protein 1-like [Cucumis sativus]	[more]
gi\|1009121921\|ref\|XP_015877725.1\|	1.7e-22	67.94	PREDICTED: glycine-rich cell wall structural protein 1-like [Ziziphus jujuba]	[more]
gi\|743926089\|ref\|XP_011007199.1\|	4.4e-18	64.64	PREDICTED: glycine-rich cell wall structural protein 1-like [Populus euphratica]	[more]
gi\|985435902\|ref\|XP_015382991.1\|	7.6e-18	69.88	PREDICTED: glycine-rich cell wall structural protein 1-like [Citrus sinensis]	[more]
gi\|223535885\|gb\|EEF37545.1\|	4.2e-16	72.59	Glycine-rich cell wall structural protein 1 precursor, putative [Ricinus communi...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005874	microtubule
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G009160.1	CmaCh19G009160.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01228	EGGSHELL	coord: 119..134 score: 9.5E-9coord: 177..195 score: 9.5E-9coord: 38..49 score: 9.5E-9coord: 145..155 score: 9.
None	No IPR available	PANTHER	PTHR40903	FAMILY NOT NAMED	coord: 1..176 score: 4.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh19G009160	Cucsa.148600	Cucumber (Gy14) v1	cgycmaB0407
CmaCh19G009160	CmoCh11G018920	Cucurbita moschata (Rifu)	cmacmoB492
CmaCh19G009160	CmoCh19G009410	Cucurbita moschata (Rifu)	cmacmoB508
CmaCh19G009160	Lsi11G014460	Bottle gourd (USVL1VR-Ls)	cmalsiB472
CmaCh19G009160	MELO3C018822.2	Melon (DHL92) v3.6.1	cmamedB534
CmaCh19G009160	Cla97C02G028380	Watermelon (97103) v2	cmawmbB531
CmaCh19G009160	Bhi05G001182	Wax gourd	cmawgoB0652
CmaCh19G009160	CsGy7G003290	Cucumber (Gy14) v2	cgybcmaB944

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh19G009160	CmaCh11G018180	Cucurbita maxima (Rimu)	cmacmaB148

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh19G009160	Cucumber (Chinese Long) v3	cmacucB0606
CmaCh19G009160	Cucumber (Chinese Long) v3	cmacucB0629
CmaCh19G009160	Cucumber (Chinese Long) v3	cmacucB0638
CmaCh19G009160	Watermelon (97103) v2	cmawmbB520
CmaCh19G009160	Wax gourd	cmawgoB0665
CmaCh19G009160	Wax gourd	cmawgoB0669
CmaCh19G009160	Cucurbita maxima (Rimu)	cmacmaB443
CmaCh19G009160	Cucurbita maxima (Rimu)	cmacmaB451
CmaCh19G009160	Cucurbita maxima (Rimu)	cmacmaB456
CmaCh19G009160	Cucurbita maxima (Rimu)	cmacmaB464
CmaCh19G009160	Cucurbita moschata (Rifu)	cmacmoB524
CmaCh19G009160	Cucurbita moschata (Rifu)	cmacmoB529
CmaCh19G009160	Cucurbita moschata (Rifu)	cmacmoB535
CmaCh19G009160	Wild cucumber (PI 183967)	cmacpiB510
CmaCh19G009160	Wild cucumber (PI 183967)	cmacpiB533
CmaCh19G009160	Cucumber (Chinese Long) v2	cmacuB505
CmaCh19G009160	Cucumber (Chinese Long) v2	cmacuB527
CmaCh19G009160	Melon (DHL92) v3.5.1	cmameB451
CmaCh19G009160	Melon (DHL92) v3.5.1	cmameB461
CmaCh19G009160	Watermelon (Charleston Gray)	cmawcgB456
CmaCh19G009160	Watermelon (Charleston Gray)	cmawcgB460
CmaCh19G009160	Watermelon (Charleston Gray)	cmawcgB462
CmaCh19G009160	Watermelon (97103) v1	cmawmB499
CmaCh19G009160	Watermelon (97103) v1	cmawmB502
CmaCh19G009160	Cucurbita pepo (Zucchini)	cmacpeB522
CmaCh19G009160	Cucurbita pepo (Zucchini)	cmacpeB525
CmaCh19G009160	Cucurbita pepo (Zucchini)	cmacpeB537
CmaCh19G009160	Cucurbita pepo (Zucchini)	cmacpeB545
CmaCh19G009160	Bottle gourd (USVL1VR-Ls)	cmalsiB470
CmaCh19G009160	Bottle gourd (USVL1VR-Ls)	cmalsiB477
CmaCh19G009160	Cucumber (Gy14) v2	cgybcmaB211
CmaCh19G009160	Melon (DHL92) v3.6.1	cmamedB564
CmaCh19G009160	Silver-seed gourd	carcmaB0038
CmaCh19G009160	Silver-seed gourd	carcmaB0910
CmaCh19G009160	Silver-seed gourd	carcmaB1214