CmaCh19G008050 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTTCGCTTCTTCTAGTAGTGTTATCTGTCAGAACAGAGCCTTGTCGTCCTCCGTCGTTTCTTCTCCGGGACTTTTACACCATCGCTGCTTCTCACGGCTTCAATCGCAGCGTATTCTTCATTGCAATCGTCGTTTGTCTACGAACATCGGGATAAACGCCGCTCCGTCTCTTTCTTCGGCGCCCTCTTCCGTCGTCGCTAAAACTGCTCTATCCGATGCTCATGTTCAAAGTCAGAGTTCCAGTTCTGCTCCTGGTAGTGGTAAGTGTTGTTGGAATAATTTTCTTTTACTGTTTTATTTCGTGTTCATCATTAGTTCTTATTGGAATGACTTGCAACGTCAGTTTGACTGATTTTCAGTGCTTGGTTTCTAATTATCTGAATCCATCCGTGTTTTGTGGTATTTTTTTTTCATTCTTTTAAATCTTTGACACAAAATTTGGCTTGAGTGTTGGATATTTGGAAAACAGACGATTTATTTTGTGTATCCATTCGTTTTAAGGGTGGTCTGATTTTGCCAAAAACGTCTCTGGCGAGTGGGATGGATATGGTGCGGATTTTTCTTCTGGAGGAACGCCAATTGAACTTCCAGAATTCGTTGTCCCCGATGCTTATAGAGAATGGGAGGTTAAGGTTTTCGACTGGCAGACTCAGTGCCCCACTCTTGCGGAACCTGAGAAGCCCTCTTTCATGTACAAGACAATAAAGCTACTTCCTACAGTGGGATGTGAAGCCGATGCTGCAACCCGTTACAGCATTGATGAGAGAAATGCTGGAAATGGAATTGGTTCAAATGATGAAGTGACTGCCTTTGCGTATCAACGTAGTGGATGTTATGTAGTTGTTTGGCCGGTTAAGGTTGGGGGTTCTTATAAGTTAATGGAGTTGGAGCATTGCCTGGTTAGTCCTCAAGATCGTGAATCCCGTGTGAGGGTTGTTCAGGTTGTCCGAGTCGAAGGCACACGGCTAGTGTTGCAGAGTATCAAAGTTTTCTGCGAGCAGTGGTATGGACCATTCAGAAACGGAGAACAGCTTGGTGGATGTGCCATCCGAGACTCATCATTTGCTTCTACAGCTGCCTTGAAAGCTTCTGAGGTTGTTGGTTCATGGCAGGGTCCTGTCTCTGTTGCCCGTTTTGATGGTTCTCAGATTGTAAGTTATATAATCTTCCTTTGCTTTTGATCATCTTTTATAGCACGGTGAAGTGATCCTAAAATCTCAGCTTTTAGTTCGATGCTACCATTTTTTAGTTTTGCATTGCCTAATGCTTTGGTGTTGATCCATAACTTTCGTTTTTCTTCTCCTTAAAATTCTTAGAAGTCAAATTTTAATCTTTCGCTTATAAGTATGAAATCAAAAGATTGCCTGGCATCATCGACCAAATCATTGATACTATGAATTTTCAGAAAATATCAACAAATTTTGTGACTTTTATGCATTGGTGATTTCTCTTGAATGATTGATTACAATTTACAACATTTTTCTAATGATATTTGCCCACACCCCAATATTTTTTAAATTATGATGGCAAGTTTTGTGTTAAGCTGAGGTCTCGAACCTTACTTTTTTGACCGATGGAAAAATGTGTACCGAAGTGTTTGTCTGGTCAATTATCAGTGGGAACTAGCTTATAGTTTGTACAGCATCTATCCATTCACCAAAATTTTGATAGCATATTTGGAGTAATCCTTGAGCAAATTGTTGTTTACTTTTCTAACAGTTTCCCCATTCCATTTCTTTTTCGAGACATTTAGTCTATATGGTGACACTGTAACCATGCTAAAGTGAATTTAATAGGCACAATATAACTCCGTTTCCTGTTTGAATATGTATTGGAAAATTGACTGCAGAATGTTATACAAGAACTTTTGGCTGACAATGTGCAAAAGTCGGTGAGAACTGAATCAGAACTCAAGGTACTTCCCAAGCAACTATGGTGTTCCCTTAAAGAAAGTGAAGACAGTGGGGATACTTGCTGTGAAGTAGGATGGCTTTTTGATCACGGACATGCAATTACATCAAGATGCATCTTCTCAAGCTCAGCAAAATTGAAGGCAAGTTTTTGCATTTAA ATGGCGTTCGCTTCTTCTAGTAGTGTTATCTGTCAGAACAGAGCCTTGTCGTCCTCCGTCGTTTCTTCTCCGGGACTTTTACACCATCGCTGCTTCTCACGGCTTCAATCGCAGCGTATTCTTCATTGCAATCGTCGTTTGTCTACGAACATCGGGATAAACGCCGCTCCGTCTCTTTCTTCGGCGCCCTCTTCCGTCGTCGCTAAAACTGCTCTATCCGATGCTCATGTTCAAAGTCAGAGTTCCAGTTCTGCTCCTGGTAGTGGGTGGTCTGATTTTGCCAAAAACGTCTCTGGCGAGTGGGATGGATATGGTGCGGATTTTTCTTCTGGAGGAACGCCAATTGAACTTCCAGAATTCGTTGTCCCCGATGCTTATAGAGAATGGGAGGTTAAGGTTTTCGACTGGCAGACTCAGTGCCCCACTCTTGCGGAACCTGAGAAGCCCTCTTTCATGTACAAGACAATAAAGCTACTTCCTACAGTGGGATGTGAAGCCGATGCTGCAACCCGTTACAGCATTGATGAGAGAAATGCTGGAAATGGAATTGGTTCAAATGATGAAGTGACTGCCTTTGCGTATCAACGTAGTGGATGTTATGTAGTTGTTTGGCCGGTTAAGGTTGGGGGTTCTTATAAGTTAATGGAGTTGGAGCATTGCCTGGTTAGTCCTCAAGATCGTGAATCCCGTGTGAGGGTTGTTCAGGTTGTCCGAGTCGAAGGCACACGGCTAGTGTTGCAGAGTATCAAAGTTTTCTGCGAGCAGTGGTATGGACCATTCAGAAACGGAGAACAGCTTGGTGGATGTGCCATCCGAGACTCATCATTTGCTTCTACAGCTGCCTTGAAAGCTTCTGAGGTTGTTGGTTCATGGCAGGGTCCTGTCTCTGTTGCCCGTTTTGATGGTTCTCAGATTAATGTTATACAAGAACTTTTGGCTGACAATGTGCAAAAGTCGGTGAGAACTGAATCAGAACTCAAGGTACTTCCCAAGCAACTATGGTGTTCCCTTAAAGAAAGTGAAGACAGTGGGGATACTTGCTGTGAAGTAGGATGGCTTTTTGATCACGGACATGCAATTACATCAAGATGCATCTTCTCAAGCTCAGCAAAATTGAAGGCAAGTTTTTGCATTTAA ATGGCGTTCGCTTCTTCTAGTAGTGTTATCTGTCAGAACAGAGCCTTGTCGTCCTCCGTCGTTTCTTCTCCGGGACTTTTACACCATCGCTGCTTCTCACGGCTTCAATCGCAGCGTATTCTTCATTGCAATCGTCGTTTGTCTACGAACATCGGGATAAACGCCGCTCCGTCTCTTTCTTCGGCGCCCTCTTCCGTCGTCGCTAAAACTGCTCTATCCGATGCTCATGTTCAAAGTCAGAGTTCCAGTTCTGCTCCTGGTAGTGGGTGGTCTGATTTTGCCAAAAACGTCTCTGGCGAGTGGGATGGATATGGTGCGGATTTTTCTTCTGGAGGAACGCCAATTGAACTTCCAGAATTCGTTGTCCCCGATGCTTATAGAGAATGGGAGGTTAAGGTTTTCGACTGGCAGACTCAGTGCCCCACTCTTGCGGAACCTGAGAAGCCCTCTTTCATGTACAAGACAATAAAGCTACTTCCTACAGTGGGATGTGAAGCCGATGCTGCAACCCGTTACAGCATTGATGAGAGAAATGCTGGAAATGGAATTGGTTCAAATGATGAAGTGACTGCCTTTGCGTATCAACGTAGTGGATGTTATGTAGTTGTTTGGCCGGTTAAGGTTGGGGGTTCTTATAAGTTAATGGAGTTGGAGCATTGCCTGGTTAGTCCTCAAGATCGTGAATCCCGTGTGAGGGTTGTTCAGGTTGTCCGAGTCGAAGGCACACGGCTAGTGTTGCAGAGTATCAAAGTTTTCTGCGAGCAGTGGTATGGACCATTCAGAAACGGAGAACAGCTTGGTGGATGTGCCATCCGAGACTCATCATTTGCTTCTACAGCTGCCTTGAAAGCTTCTGAGGTTGTTGGTTCATGGCAGGGTCCTGTCTCTGTTGCCCGTTTTGATGGTTCTCAGATTAATGTTATACAAGAACTTTTGGCTGACAATGTGCAAAAGTCGGTGAGAACTGAATCAGAACTCAAGGTACTTCCCAAGCAACTATGGTGTTCCCTTAAAGAAAGTGAAGACAGTGGGGATACTTGCTGTGAAGTAGGATGGCTTTTTGATCACGGACATGCAATTACATCAAGATGCATCTTCTCAAGCTCAGCAAAATTGAAGGCAAGTTTTTGCATTTAA MAFASSSSVICQNRALSSSVVSSPGLLHHRCFSRLQSQRILHCNRRLSTNIGINAAPSLSSAPSSVVAKTALSDAHVQSQSSSSAPGSGWSDFAKNVSGEWDGYGADFSSGGTPIELPEFVVPDAYREWEVKVFDWQTQCPTLAEPEKPSFMYKTIKLLPTVGCEADAATRYSIDERNAGNGIGSNDEVTAFAYQRSGCYVVVWPVKVGGSYKLMELEHCLVSPQDRESRVRVVQVVRVEGTRLVLQSIKVFCEQWYGPFRNGEQLGGCAIRDSSFASTAALKASEVVGSWQGPVSVARFDGSQINVIQELLADNVQKSVRTESELKVLPKQLWCSLKESEDSGDTCCEVGWLFDHGHAITSRCIFSSSAKLKASFCI
BLAST of CmaCh19G008050 vs. TrEMBL
Match: A0A0A0K0X9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G026250 PE=4 SV=1) HSP 1 Score: 653.7 bits (1685), Expect = 1.4e-184 Identity = 328/373 (87.94%), Postives = 345/373 (92.49%), Query Frame = 1
BLAST of CmaCh19G008050 vs. TrEMBL
Match: A0A061E9F6_THECC (Uncharacterized protein isoform 3 OS=Theobroma cacao GN=TCM_007582 PE=4 SV=1) HSP 1 Score: 427.9 bits (1099), Expect = 1.2e-116 Identity = 220/376 (58.51%), Postives = 281/376 (74.73%), Query Frame = 1
BLAST of CmaCh19G008050 vs. TrEMBL
Match: A0A061E2P9_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_007582 PE=4 SV=1) HSP 1 Score: 426.8 bits (1096), Expect = 2.8e-116 Identity = 219/375 (58.40%), Postives = 280/375 (74.67%), Query Frame = 1
BLAST of CmaCh19G008050 vs. TrEMBL
Match: A0A061E3I4_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_007582 PE=4 SV=1) HSP 1 Score: 426.8 bits (1096), Expect = 2.8e-116 Identity = 219/375 (58.40%), Postives = 280/375 (74.67%), Query Frame = 1
BLAST of CmaCh19G008050 vs. TrEMBL
Match: M5W2T0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007176mg PE=4 SV=1) HSP 1 Score: 425.2 bits (1092), Expect = 8.1e-116 Identity = 218/342 (63.74%), Postives = 264/342 (77.19%), Query Frame = 1
BLAST of CmaCh19G008050 vs. TAIR10
Match: AT4G38225.3 (AT4G38225.3 unknown protein) HSP 1 Score: 345.1 bits (884), Expect = 5.4e-95 Identity = 174/313 (55.59%), Postives = 228/313 (72.84%), Query Frame = 1
BLAST of CmaCh19G008050 vs. NCBI nr
Match: gi|659100669|ref|XP_008451209.1| (PREDICTED: uncharacterized protein LOC103492572 [Cucumis melo]) HSP 1 Score: 663.3 bits (1710), Expect = 2.5e-187 Identity = 332/373 (89.01%), Postives = 347/373 (93.03%), Query Frame = 1
BLAST of CmaCh19G008050 vs. NCBI nr
Match: gi|449471978|ref|XP_004153459.1| (PREDICTED: uncharacterized protein LOC101221421 [Cucumis sativus]) HSP 1 Score: 653.7 bits (1685), Expect = 2.0e-184 Identity = 328/373 (87.94%), Postives = 345/373 (92.49%), Query Frame = 1
BLAST of CmaCh19G008050 vs. NCBI nr
Match: gi|1009178066|ref|XP_015870320.1| (PREDICTED: uncharacterized protein LOC107407544 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 450.7 bits (1158), Expect = 2.6e-123 Identity = 231/358 (64.53%), Postives = 273/358 (76.26%), Query Frame = 1
BLAST of CmaCh19G008050 vs. NCBI nr
Match: gi|1009178068|ref|XP_015870321.1| (PREDICTED: uncharacterized protein LOC107407544 isoform X2 [Ziziphus jujuba]) HSP 1 Score: 446.4 bits (1147), Expect = 4.9e-122 Identity = 231/358 (64.53%), Postives = 273/358 (76.26%), Query Frame = 1
BLAST of CmaCh19G008050 vs. NCBI nr
Match: gi|590688938|ref|XP_007043087.1| (Uncharacterized protein isoform 3 [Theobroma cacao]) HSP 1 Score: 427.9 bits (1099), Expect = 1.8e-116 Identity = 220/376 (58.51%), Postives = 281/376 (74.73%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |