CmaCh19G006820 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh19G006820
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Cathepsin B-like cysteine proteinase 2
Location	Cma_Chr19 : 7077999 .. 7078883 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATACGTCTGTTTCCTCTTTAGTGATACTATTCTGAAACCTTTGAACTTGCATTTTATAAATTCTGCATATATCTTCTGCACACGGCAGTGTGATCCAGAGGGAGCTGGTTCCTGTGACTCTGGTTGCAATGGTGGCTCGATGAACAGTGCATTTGAATACACATTAAAAGTTGGTTGCAATCGTGAAGCCTGTAAGTTTGACAGGTCCAAGATCGCCGCTGCATCAGTTGCCAATTTCAGTGTTGTTTCACTTGATGAGGACCAAATTGCTGCAAATCTGGTGGAAAATGGCCCACTTGCAAGTAAAATACCCCATCAAATCATTTAACTTTCATTATTCTGATACAGATTCCATATGTCCTTAAGAACATCCAATATGGATCTAACTAGAATCAGCAGCTAAATTCTGGTTTTTTTTTTTTTTTACCACAATGCAGTTGCTATCAATGCGGTGTTCATGCAGTCATATATAGGTGGAGTATCTTGTCCATTCATATGTTCAAAGCGGTTGGAACATGGAGTTTTGCTGGTGGGTTATGGCTCAGCTGACTATTGGATCATCAAAAACTCATGGGGAGAAAATGGATACTACAGAATCTGCAGAGGAAGGAATATTTGTGGAGTTGATTCCTTGGTCTCAACTGTTGCAGCTGTTCATACCCCAATTGCAGCAGCAGGTCAGTAAATTGGATCTCTCTTAACACTGTAATTTATGAAAATGTGTGAATTCTAAGCCTTTAGGTCCCTCCTTTTCTTTCTTTCCTTATTCTTATTGGATTCATTATTGTTCTCCTGTTCCATAAAATATGCCAAGAAACCAAAAGAATCTGGTTCATGTACATTCCCTTCTTATACTATCACATTTTAAATGAAATGGAAG

mRNA sequence

ATGCCATACGTCTGTTTCCTCTTTAGTGATACTATTCTGAAACCTTTGAACTTGCATTTTATAAATTCTGCATATATCTTCTGCACACGGCAGTGTGATCCAGAGGGAGCTGGTTCCTGTGACTCTGGTTGCAATGGTGGCTCGATGAACAGTGCATTTGAATACACATTAAAAGTTGGTTGCAATCGTGAAGCCTGTAAGTTTGACAGGTCCAAGATCGCCGCTGCATCAGTTGCCAATTTCAGTGTTGTTTCACTTGATGAGGACCAAATTGCTGCAAATCTGGTGGAAAATGGCCCACTTGCAATTGCTATCAATGCGGTGTTCATGCAGTCATATATAGGTGGAGTATCTTGTCCATTCATATGTTCAAAGCGGTTGGAACATGGAGTTTTGCTGGTGGGTTATGGCTCAGCTGACTATTGGATCATCAAAAACTCATGGGGAGAAAATGGATACTACAGAATCTGCAGAGGAAGGAATATTTGTGGAGTTGATTCCTTGGTCTCAACTGTTGCAGCTGTTCATACCCCAATTGCAGCAGCAGGTCAGTAAATTGGATCTCTCTTAACACTGTAATTTATGAAAATGTGTGAATTCTAAGCCTTTAGGTCCCTCCTTTTCTTTCTTTCCTTATTCTTATTGGATTCATTATTGTTCTCCTGTTCCATAAAATATGCCAAGAAACCAAAAGAATCTGGTTCATGTACATTCCCTTCTTATACTATCACATTTTAAATGAAATGGAAG

Coding sequence (CDS)

ATGCCATACGTCTGTTTCCTCTTTAGTGATACTATTCTGAAACCTTTGAACTTGCATTTTATAAATTCTGCATATATCTTCTGCACACGGCAGTGTGATCCAGAGGGAGCTGGTTCCTGTGACTCTGGTTGCAATGGTGGCTCGATGAACAGTGCATTTGAATACACATTAAAAGTTGGTTGCAATCGTGAAGCCTGTAAGTTTGACAGGTCCAAGATCGCCGCTGCATCAGTTGCCAATTTCAGTGTTGTTTCACTTGATGAGGACCAAATTGCTGCAAATCTGGTGGAAAATGGCCCACTTGCAATTGCTATCAATGCGGTGTTCATGCAGTCATATATAGGTGGAGTATCTTGTCCATTCATATGTTCAAAGCGGTTGGAACATGGAGTTTTGCTGGTGGGTTATGGCTCAGCTGACTATTGGATCATCAAAAACTCATGGGGAGAAAATGGATACTACAGAATCTGCAGAGGAAGGAATATTTGTGGAGTTGATTCCTTGGTCTCAACTGTTGCAGCTGTTCATACCCCAATTGCAGCAGCAGGTCAGTAA

Protein sequence

MPYVCFLFSDTILKPLNLHFINSAYIFCTRQCDPEGAGSCDSGCNGGSMNSAFEYTLKVGCNREACKFDRSKIAAASVANFSVVSLDEDQIAANLVENGPLAIAINAVFMQSYIGGVSCPFICSKRLEHGVLLVGYGSADYWIIKNSWGENGYYRICRGRNICGVDSLVSTVAAVHTPIAAAGQ

Homology

[Close]

BLAST of CmaCh19G006820 vs. Swiss-Prot
Match: RD19B_ARATH (Probable cysteine protease RD19B OS=Arabidopsis thaliana GN=RD19B PE=2 SV=2)

HSP 1 Score: 226.9 bits (577), Expect = 1.8e-58
Identity = 118/173 (68.21%), Postives = 133/173 (76.88%), Query Frame = 1


Query: 28  CTRQCDPEGAGSCDSGCNGGSMNSAFEYTLKVG-CNRE-----------ACKFDRSKIAA 87
           C  +CDPE  GSCDSGCNGG MNSAFEYTLK G   RE           +CK DRSKI A
Sbjct: 187 CDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDGGSCKLDRSKIVA 246

Query: 88  ASVANFSVVSLDEDQIAANLVENGPLAIAINAVFMQSYIGGVSCPFICSKRLEHGVLLVG 147
            SV+NFSVVS++EDQIAANL++NGPLA+AINA +MQ+YIGGVSCP+ICS+RL HGVLLVG
Sbjct: 247 -SVSNFSVVSINEDQIAANLIKNGPLAVAINAAYMQTYIGGVSCPYICSRRLNHGVLLVG 306

Query: 148 YGSA----------DYWIIKN----SWGENGYYRICRGRNICGVDSLVSTVAA 175
           YGSA           YWIIKN    SWGENG+Y+IC+GRNICGVDSLVSTVAA
Sbjct: 307 YGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSLVSTVAA 358

[Close]

BLAST of CmaCh19G006820 vs. Swiss-Prot
Match: RD19A_ARATH (Cysteine protease RD19A OS=Arabidopsis thaliana GN=RD19A PE=1 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.0e-56
Identity = 112/173 (64.74%), Postives = 132/173 (76.30%), Query Frame = 1


Query: 28  CTRQCDPEGAGSCDSGCNGGSMNSAFEYTLKVGC------------NREACKFDRSKIAA 87
           C  +CDPE A SCDSGCNGG MNSAFEYTLK G             + + CK D+SKI A
Sbjct: 190 CDHECDPEEADSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKDGKTCKLDKSKIVA 249

Query: 88  ASVANFSVVSLDEDQIAANLVENGPLAIAINAVFMQSYIGGVSCPFICSKRLEHGVLLVG 147
            SV+NFSV+S+DE+QIAANLV+NGPLA+AINA +MQ+YIGGVSCP+IC++RL HGVLLVG
Sbjct: 250 -SVSNFSVISIDEEQIAANLVKNGPLAVAINAGYMQTYIGGVSCPYICTRRLNHGVLLVG 309

Query: 148 YGSA----------DYWIIKNS----WGENGYYRICRGRNICGVDSLVSTVAA 175
           YG+A           YWIIKNS    WGENG+Y+IC+GRNICGVDS+VSTVAA
Sbjct: 310 YGAAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVDSMVSTVAA 361

[Close]

BLAST of CmaCh19G006820 vs. Swiss-Prot
Match: RD19C_ARATH (Probable cysteine protease RD19C OS=Arabidopsis thaliana GN=RD19C PE=2 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 6.1e-54
Identity = 110/177 (62.15%), Postives = 132/177 (74.58%), Query Frame = 1


Query: 28  CTRQCDPEGAGSCDSGCNGGSMNSAFEYTLKVGC------------NREACKFDRSKIAA 87
           C  +CDP  A SCDSGC+GG MN+AFEY LK G             +  ACKFD+SKI A
Sbjct: 195 CDHECDPAQANSCDSGCSGGLMNNAFEYALKAGGLMKEEDYPYTGRDHTACKFDKSKIVA 254

Query: 88  ASVANFSVVSLDEDQIAANLVENGPLAIAINAVFMQSYIGGVSCPFICSKRLEHGVLLVG 147
            SV+NFSVVS DEDQIAANLV++GPLAIAINA++MQ+YIGGVSCP++CSK  +HGVLLVG
Sbjct: 255 -SVSNFSVVSSDEDQIAANLVQHGPLAIAINAMWMQTYIGGVSCPYVCSKSQDHGVLLVG 314

Query: 148 YGSA----------DYWIIKNS----WGENGYYRICRG-RNICGVDSLVSTVAAVHT 178
           +GS+           YWIIKNS    WGE+GYY+ICRG  N+CG+D++VSTVAAVHT
Sbjct: 315 FGSSGYAPIRLKEKPYWIIKNSWGAMWGEHGYYKICRGPHNMCGMDTMVSTVAAVHT 370

[Close]

BLAST of CmaCh19G006820 vs. Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 6.1e-54
Identity = 109/176 (61.93%), Postives = 132/176 (75.00%), Query Frame = 1


Query: 28  CTRQCDPEGAGSCDSGCNGGSMNSAFEYTLKVG----------CNRE-ACKFDRSKIAAA 87
           C   CDPE AGSCDSGCNGG MN+AFEY L+ G            R+ +CKFD+SK+ A 
Sbjct: 187 CDHVCDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRDGSCKFDKSKVVA- 246

Query: 88  SVANFSVVSLDEDQIAANLVENGPLAIAINAVFMQSYIGGVSCPFICSK-RLEHGVLLVG 147
           SV+NFSVV+LDEDQIAANLV+NGPLA+AINA +MQ+Y+ GVSCP++C+K RL+HGVLLVG
Sbjct: 247 SVSNFSVVTLDEDQIAANLVKNGPLAVAINAAWMQTYMSGVSCPYVCAKSRLDHGVLLVG 306

Query: 148 YGSA----------DYWIIKNSWGEN----GYYRICRGRNICGVDSLVSTVAAVHT 178
           +G             YWIIKNSWG+N    GYY+ICRGRN+CGVDS+VSTVAA  +
Sbjct: 307 FGKGAYAPIRLKEKPYWIIKNSWGQNWGEQGYYKICRGRNVCGVDSMVSTVAAAQS 361

[Close]

BLAST of CmaCh19G006820 vs. Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.5e-49
Identity = 103/180 (57.22%), Postives = 123/180 (68.33%), Query Frame = 1


Query: 25  YIFCTRQCDPEGAGSCDSGCNGGSMNSAFEYTLKVGCNREA-----------CKFDRSKI 84
           ++ C  +CD     SCDSGCNGG M +AF Y  K G                CKFD+SKI
Sbjct: 189 FVDCDHECDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDGKCKFDKSKI 248

Query: 85  AAASVANFSVVSLDEDQIAANLVENGPLAIAINAVFMQSYIGGVSCPFICSKRLEHGVLL 144
            A SV NFSVVS+DE QI+ANL+++GPLAI INA +MQ+YIGGVSCP+IC + L+HGVLL
Sbjct: 249 VA-SVQNFSVVSVDEAQISANLIKHGPLAIGINAAYMQTYIGGVSCPYICGRHLDHGVLL 308

Query: 145 VGYGSA----------DYWIIKNS----WGENGYYRICRG---RNICGVDSLVSTVAAVH 177
           VGYG++           YWIIKNS    WGENGYY+ICRG   RN CGVDS+VSTV+AVH
Sbjct: 309 VGYGASGFAPIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSMVSTVSAVH 367

[Close]

BLAST of CmaCh19G006820 vs. TrEMBL
Match: A0A059BDD0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G01706 PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 6.6e-63
Identity = 127/176 (72.16%), Postives = 140/176 (79.55%), Query Frame = 1


Query: 28  CTRQCDPEGAGSCDSGCNGGSMNSAFEYTLKVG------------CNREACKFDRSKIAA 87
           C  +CDPE  GSCDSGCNGG MNSAFEYTLK G             +R +CKFD+SKIAA
Sbjct: 199 CDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRSSCKFDKSKIAA 258

Query: 88  ASVANFSVVSLDEDQIAANLVENGPLAIAINAVFMQSYIGGVSCPFICSKRLEHGVLLVG 147
            SVANFSVVSLDEDQIAANLV+NGPLAIAINAVFMQ+Y+GGVSCP+ICSKRL+HGVLLVG
Sbjct: 259 -SVANFSVVSLDEDQIAANLVKNGPLAIAINAVFMQTYVGGVSCPYICSKRLDHGVLLVG 318

Query: 148 YGSA----------DYWIIKNS----WGENGYYRICRGRNICGVDSLVSTVAAVHT 178
           YGSA           YWIIKNS    WGENG+Y+ICRGRNICGVDS+VSTVAA+HT
Sbjct: 319 YGSAAYSPIRMKEKPYWIIKNSWGENWGENGFYKICRGRNICGVDSMVSTVAAIHT 373

[Close]

BLAST of CmaCh19G006820 vs. TrEMBL
Match: A0A0B0PI03_GOSAR (Cysteinease RD19a-like protein OS=Gossypium arboreum GN=F383_09016 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 4.3e-62
Identity = 127/176 (72.16%), Postives = 138/176 (78.41%), Query Frame = 1


Query: 28  CTRQCDPEGAGSCDSGCNGGSMNSAFEYTLKVG------------CNREACKFDRSKIAA 87
           C  +CDPE AGSCDSGCNGG MNSAFEYTLK G             +R  CKFD+SKI A
Sbjct: 197 CDHECDPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGTCKFDKSKIVA 256

Query: 88  ASVANFSVVSLDEDQIAANLVENGPLAIAINAVFMQSYIGGVSCPFICSKRLEHGVLLVG 147
             VANFSVVSLDEDQIAANLV+NGPLA+AINAVFMQ+YIGGVSCP+ICSKRL+HGVLLVG
Sbjct: 257 -KVANFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYICSKRLDHGVLLVG 316

Query: 148 YGSA----------DYWIIKNS----WGENGYYRICRGRNICGVDSLVSTVAAVHT 178
           YGSA           YWIIKNS    WGENGYY+ICRGRN+CGVDSLVSTVAAV+T
Sbjct: 317 YGSAGYAPIRLKDKPYWIIKNSWGETWGENGYYKICRGRNVCGVDSLVSTVAAVNT 371

[Close]

BLAST of CmaCh19G006820 vs. TrEMBL
Match: A0A0D2RSY7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G247000 PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.2e-61
Identity = 126/176 (71.59%), Postives = 138/176 (78.41%), Query Frame = 1


Query: 28  CTRQCDPEGAGSCDSGCNGGSMNSAFEYTLKVG------------CNREACKFDRSKIAA 87
           C  +CDPE AGSCDSGCNGG MNSAFEYTLK G             +R  CKFD+SKI A
Sbjct: 197 CDHECDPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGTCKFDKSKIVA 256

Query: 88  ASVANFSVVSLDEDQIAANLVENGPLAIAINAVFMQSYIGGVSCPFICSKRLEHGVLLVG 147
             VANFSVVSLDEDQIAANLV+NGPLA+AINAVFMQ+YIGGVSCP+ICSKRL+HGVLLVG
Sbjct: 257 -KVANFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYICSKRLDHGVLLVG 316

Query: 148 YGSA----------DYWIIKNS----WGENGYYRICRGRNICGVDSLVSTVAAVHT 178
           YGSA           YWIIKNS    WGENG+Y+ICRGRN+CGVDSLVSTVAAV+T
Sbjct: 317 YGSAGYAPIRLKDKPYWIIKNSWGETWGENGFYKICRGRNVCGVDSLVSTVAAVNT 371

[Close]

BLAST of CmaCh19G006820 vs. TrEMBL
Match: F6I1A2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g00280 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 2.1e-61
Identity = 122/176 (69.32%), Postives = 140/176 (79.55%), Query Frame = 1


Query: 28  CTRQCDPEGAGSCDSGCNGGSMNSAFEYTLKVG------------CNREACKFDRSKIAA 87
           C  +CDPE  GSCDSGCNGG MN+AFEYTLK G             +R +CKFD++KIAA
Sbjct: 200 CDHECDPEEMGSCDSGCNGGLMNTAFEYTLKAGGLMKEEDYPYTGTDRGSCKFDKTKIAA 259

Query: 88  ASVANFSVVSLDEDQIAANLVENGPLAIAINAVFMQSYIGGVSCPFICSKRLEHGVLLVG 147
            SV+NFSV+SLDEDQIAANLV+NGPLA+AINAVFMQ+Y+GGVSCP+ICSKRL+HGVLLVG
Sbjct: 260 -SVSNFSVISLDEDQIAANLVKNGPLAVAINAVFMQTYVGGVSCPYICSKRLDHGVLLVG 319

Query: 148 YGSA----------DYWIIKNS----WGENGYYRICRGRNICGVDSLVSTVAAVHT 178
           YGSA           YWIIKNS    WGENG+Y+ICRGRN+CGVDS+VSTVAAVHT
Sbjct: 320 YGSAGYAPIRMKDKPYWIIKNSWGENWGENGFYKICRGRNVCGVDSMVSTVAAVHT 374

[Close]

BLAST of CmaCh19G006820 vs. TrEMBL
Match: A0A067L3H8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26761 PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.8e-61
Identity = 123/176 (69.89%), Postives = 140/176 (79.55%), Query Frame = 1


Query: 28  CTRQCDPEGAGSCDSGCNGGSMNSAFEYTLKVG------------CNREACKFDRSKIAA 87
           C  +CDPE AGSCDSGCNGG MNSAFEYTLK G             +R ACKFD++K+AA
Sbjct: 193 CDHECDPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGACKFDKTKVAA 252

Query: 88  ASVANFSVVSLDEDQIAANLVENGPLAIAINAVFMQSYIGGVSCPFICSKRLEHGVLLVG 147
            +VANFSV+SLDEDQIAANLV+NGPLA+AINAV+MQ+YIGGVSCP+ICSKRL+HGVLLVG
Sbjct: 253 -TVANFSVISLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSKRLDHGVLLVG 312

Query: 148 YGSA----------DYWIIKNS----WGENGYYRICRGRNICGVDSLVSTVAAVHT 178
           YGSA           YWIIKNS    WGE+GYY+ICRGRN+CGVDS+VSTVAAV T
Sbjct: 313 YGSAGYAPIRLKEKPYWIIKNSWGETWGESGYYKICRGRNVCGVDSMVSTVAAVQT 367

[Close]

BLAST of CmaCh19G006820 vs. TAIR10
Match: AT2G21430.1 (AT2G21430.1 Papain family cysteine protease)

HSP 1 Score: 226.9 bits (577), Expect = 1.0e-59
Identity = 118/173 (68.21%), Postives = 133/173 (76.88%), Query Frame = 1


Query: 28  CTRQCDPEGAGSCDSGCNGGSMNSAFEYTLKVG-CNRE-----------ACKFDRSKIAA 87
           C  +CDPE  GSCDSGCNGG MNSAFEYTLK G   RE           +CK DRSKI A
Sbjct: 187 CDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDGGSCKLDRSKIVA 246

Query: 88  ASVANFSVVSLDEDQIAANLVENGPLAIAINAVFMQSYIGGVSCPFICSKRLEHGVLLVG 147
            SV+NFSVVS++EDQIAANL++NGPLA+AINA +MQ+YIGGVSCP+ICS+RL HGVLLVG
Sbjct: 247 -SVSNFSVVSINEDQIAANLIKNGPLAVAINAAYMQTYIGGVSCPYICSRRLNHGVLLVG 306

Query: 148 YGSA----------DYWIIKN----SWGENGYYRICRGRNICGVDSLVSTVAA 175
           YGSA           YWIIKN    SWGENG+Y+IC+GRNICGVDSLVSTVAA
Sbjct: 307 YGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSLVSTVAA 358

[Close]

BLAST of CmaCh19G006820 vs. TAIR10
Match: AT4G39090.1 (AT4G39090.1 Papain family cysteine protease)

HSP 1 Score: 221.1 bits (562), Expect = 5.7e-58
Identity = 112/173 (64.74%), Postives = 132/173 (76.30%), Query Frame = 1


Query: 28  CTRQCDPEGAGSCDSGCNGGSMNSAFEYTLKVGC------------NREACKFDRSKIAA 87
           C  +CDPE A SCDSGCNGG MNSAFEYTLK G             + + CK D+SKI A
Sbjct: 190 CDHECDPEEADSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKDGKTCKLDKSKIVA 249

Query: 88  ASVANFSVVSLDEDQIAANLVENGPLAIAINAVFMQSYIGGVSCPFICSKRLEHGVLLVG 147
            SV+NFSV+S+DE+QIAANLV+NGPLA+AINA +MQ+YIGGVSCP+IC++RL HGVLLVG
Sbjct: 250 -SVSNFSVISIDEEQIAANLVKNGPLAVAINAGYMQTYIGGVSCPYICTRRLNHGVLLVG 309

Query: 148 YGSA----------DYWIIKNS----WGENGYYRICRGRNICGVDSLVSTVAA 175
           YG+A           YWIIKNS    WGENG+Y+IC+GRNICGVDS+VSTVAA
Sbjct: 310 YGAAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVDSMVSTVAA 361

[Close]

BLAST of CmaCh19G006820 vs. TAIR10
Match: AT4G16190.1 (AT4G16190.1 Papain family cysteine protease)

HSP 1 Score: 211.8 bits (538), Expect = 3.5e-55
Identity = 110/177 (62.15%), Postives = 132/177 (74.58%), Query Frame = 1


Query: 28  CTRQCDPEGAGSCDSGCNGGSMNSAFEYTLKVGC------------NREACKFDRSKIAA 87
           C  +CDP  A SCDSGC+GG MN+AFEY LK G             +  ACKFD+SKI A
Sbjct: 195 CDHECDPAQANSCDSGCSGGLMNNAFEYALKAGGLMKEEDYPYTGRDHTACKFDKSKIVA 254

Query: 88  ASVANFSVVSLDEDQIAANLVENGPLAIAINAVFMQSYIGGVSCPFICSKRLEHGVLLVG 147
            SV+NFSVVS DEDQIAANLV++GPLAIAINA++MQ+YIGGVSCP++CSK  +HGVLLVG
Sbjct: 255 -SVSNFSVVSSDEDQIAANLVQHGPLAIAINAMWMQTYIGGVSCPYVCSKSQDHGVLLVG 314

Query: 148 YGSA----------DYWIIKNS----WGENGYYRICRG-RNICGVDSLVSTVAAVHT 178
           +GS+           YWIIKNS    WGE+GYY+ICRG  N+CG+D++VSTVAAVHT
Sbjct: 315 FGSSGYAPIRLKEKPYWIIKNSWGAMWGEHGYYKICRGPHNMCGMDTMVSTVAAVHT 370

[Close]

BLAST of CmaCh19G006820 vs. TAIR10
Match: AT3G54940.2 (AT3G54940.2 Papain family cysteine protease)

HSP 1 Score: 182.6 bits (462), Expect = 2.2e-46
Identity = 99/204 (48.53%), Postives = 127/204 (62.25%), Query Frame = 1


Query: 5   CFLFSDTILKPLNLHFINSAYIF---------CTRQCDPEGAGSCDSGCNGGSMNSAFEY 64
           C+ FS T       HF+++  +          C + CDP+   +CD+GC GG M +A+EY
Sbjct: 161 CWAFSTTGAAE-GAHFVSTGKLLSLSEQQLVDCDQACDPKDKKACDNGCGGGLMTNAYEY 220

Query: 65  TLKVGCNREA-----------CKFDRSKIAAASVANFSVVSLDEDQIAANLVENGPLAIA 124
            ++ G   E            CKFD  K+A   V NF+ + LDE+QIAANLV +GPLA+ 
Sbjct: 221 LMEAGGLEEERSYPYTGKRGHCKFDPEKVAVR-VLNFTTIPLDENQIAANLVRHGPLAVG 280

Query: 125 INAVFMQSYIGGVSCPFICSKR-LEHGVLLVGYGS----------ADYWIIKNS----WG 174
           +NAVFMQ+YIGGVSCP ICSKR + HGVLLVGYGS            YWIIKNS    WG
Sbjct: 281 LNAVFMQTYIGGVSCPLICSKRNVNHGVLLVGYGSKGFSILRLSNKPYWIIKNSWGKKWG 340

[Close]

BLAST of CmaCh19G006820 vs. TAIR10
Match: AT1G09850.1 (AT1G09850.1 xylem bark cysteine peptidase 3)

HSP 1 Score: 75.5 bits (184), Expect = 3.9e-14
Identity = 53/163 (32.52%), Postives = 84/163 (51.53%), Query Frame = 1


Query: 39  SCDSGCNGGSMNSAFEYTLKV-GCNRE----------ACKFDRSKIAAASVANFSVVSLD 98
           S ++GCNGG M+ AFE+ +K  G + E           CK D+ K    ++ +++ V  +
Sbjct: 176 SYNAGCNGGLMDYAFEFVIKNHGIDTEKDYPYQERDGTCKKDKLKQKVVTIDSYAGVKSN 235

Query: 99  EDQIAANLVENGPLAIAI--NAVFMQSYIGGV-SCPFICSKRLEHGVLLVGYGS---ADY 158
           +++     V   P+++ I  +    Q Y  G+ S P  CS  L+H VL+VGYGS    DY
Sbjct: 236 DEKALMEAVAAQPVSVGICGSERAFQLYSSGIFSGP--CSTSLDHAVLIVGYGSQNGVDY 295

Query: 159 WIIKNSWGE----NGYYRICRGR----NICGVDSLVSTVAAVH 177
           WI+KNSWG+    +G+  + R       +CG++ L S     H
Sbjct: 296 WIVKNSWGKSWGMDGFMHMQRNTENSDGVCGINMLASYPIKTH 336

[Close]

BLAST of CmaCh19G006820 vs. NCBI nr
Match: gi|702402595|ref|XP_010066197.1| (PREDICTED: probable cysteine proteinase A494 [Eucalyptus grandis])

HSP 1 Score: 248.4 bits (633), Expect = 9.4e-63
Identity = 127/176 (72.16%), Postives = 140/176 (79.55%), Query Frame = 1


Query: 28  CTRQCDPEGAGSCDSGCNGGSMNSAFEYTLKVG------------CNREACKFDRSKIAA 87
           C  +CDPE  GSCDSGCNGG MNSAFEYTLK G             +R +CKFD+SKIAA
Sbjct: 199 CDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRSSCKFDKSKIAA 258

Query: 88  ASVANFSVVSLDEDQIAANLVENGPLAIAINAVFMQSYIGGVSCPFICSKRLEHGVLLVG 147
            SVANFSVVSLDEDQIAANLV+NGPLAIAINAVFMQ+Y+GGVSCP+ICSKRL+HGVLLVG
Sbjct: 259 -SVANFSVVSLDEDQIAANLVKNGPLAIAINAVFMQTYVGGVSCPYICSKRLDHGVLLVG 318

Query: 148 YGSA----------DYWIIKNS----WGENGYYRICRGRNICGVDSLVSTVAAVHT 178
           YGSA           YWIIKNS    WGENG+Y+ICRGRNICGVDS+VSTVAA+HT
Sbjct: 319 YGSAAYSPIRMKEKPYWIIKNSWGENWGENGFYKICRGRNICGVDSMVSTVAAIHT 373

[Close]

BLAST of CmaCh19G006820 vs. NCBI nr
Match: gi|1009149343|ref|XP_015892430.1| (PREDICTED: cysteine proteinase RD19a [Ziziphus jujuba])

HSP 1 Score: 246.1 bits (627), Expect = 4.7e-62
Identity = 126/176 (71.59%), Postives = 138/176 (78.41%), Query Frame = 1


Query: 28  CTRQCDPEGAGSCDSGCNGGSMNSAFEYTLKVG------------CNREACKFDRSKIAA 87
           C  +CDPE  GSCDSGCNGG MNSAFEYTLK G             +R  CKFD++KIAA
Sbjct: 195 CDHECDPEEKGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGTCKFDKTKIAA 254

Query: 88  ASVANFSVVSLDEDQIAANLVENGPLAIAINAVFMQSYIGGVSCPFICSKRLEHGVLLVG 147
            SVANFSVVSLDEDQIAANLV+NGPLA+AINAVFMQ+Y+GGVSCP+ICSKRL+HGVLLVG
Sbjct: 255 -SVANFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYVGGVSCPYICSKRLDHGVLLVG 314

Query: 148 YGSADY----------WIIKNS----WGENGYYRICRGRNICGVDSLVSTVAAVHT 178
           YGSA Y          WIIKNS    WGENGYY+ICRGRNICGVDS+VSTVAA HT
Sbjct: 315 YGSAGYAPIRMKDKPFWIIKNSWGETWGENGYYKICRGRNICGVDSMVSTVAAAHT 369

[Close]

BLAST of CmaCh19G006820 vs. NCBI nr
Match: gi|728844621|gb|KHG24064.1| (Cysteinease RD19a -like protein [Gossypium arboreum])

HSP 1 Score: 245.7 bits (626), Expect = 6.1e-62
Identity = 127/176 (72.16%), Postives = 138/176 (78.41%), Query Frame = 1


Query: 28  CTRQCDPEGAGSCDSGCNGGSMNSAFEYTLKVG------------CNREACKFDRSKIAA 87
           C  +CDPE AGSCDSGCNGG MNSAFEYTLK G             +R  CKFD+SKI A
Sbjct: 197 CDHECDPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGTCKFDKSKIVA 256

Query: 88  ASVANFSVVSLDEDQIAANLVENGPLAIAINAVFMQSYIGGVSCPFICSKRLEHGVLLVG 147
             VANFSVVSLDEDQIAANLV+NGPLA+AINAVFMQ+YIGGVSCP+ICSKRL+HGVLLVG
Sbjct: 257 -KVANFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYICSKRLDHGVLLVG 316

Query: 148 YGSA----------DYWIIKNS----WGENGYYRICRGRNICGVDSLVSTVAAVHT 178
           YGSA           YWIIKNS    WGENGYY+ICRGRN+CGVDSLVSTVAAV+T
Sbjct: 317 YGSAGYAPIRLKDKPYWIIKNSWGETWGENGYYKICRGRNVCGVDSLVSTVAAVNT 371

[Close]

BLAST of CmaCh19G006820 vs. NCBI nr
Match: gi|823161035|ref|XP_012480377.1| (PREDICTED: cysteine proteinase RD19a [Gossypium raimondii])

HSP 1 Score: 244.2 bits (622), Expect = 1.8e-61
Identity = 126/176 (71.59%), Postives = 138/176 (78.41%), Query Frame = 1


Query: 28  CTRQCDPEGAGSCDSGCNGGSMNSAFEYTLKVG------------CNREACKFDRSKIAA 87
           C  +CDPE AGSCDSGCNGG MNSAFEYTLK G             +R  CKFD+SKI A
Sbjct: 197 CDHECDPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGTCKFDKSKIVA 256

Query: 88  ASVANFSVVSLDEDQIAANLVENGPLAIAINAVFMQSYIGGVSCPFICSKRLEHGVLLVG 147
             VANFSVVSLDEDQIAANLV+NGPLA+AINAVFMQ+YIGGVSCP+ICSKRL+HGVLLVG
Sbjct: 257 -KVANFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYICSKRLDHGVLLVG 316

Query: 148 YGSA----------DYWIIKNS----WGENGYYRICRGRNICGVDSLVSTVAAVHT 178
           YGSA           YWIIKNS    WGENG+Y+ICRGRN+CGVDSLVSTVAAV+T
Sbjct: 317 YGSAGYAPIRLKDKPYWIIKNSWGETWGENGFYKICRGRNVCGVDSLVSTVAAVNT 371

[Close]

BLAST of CmaCh19G006820 vs. NCBI nr
Match: gi|802564032|ref|XP_012067202.1| (PREDICTED: probable cysteine proteinase A494 [Jatropha curcas])

HSP 1 Score: 243.0 bits (619), Expect = 4.0e-61
Identity = 123/176 (69.89%), Postives = 140/176 (79.55%), Query Frame = 1


Query: 28  CTRQCDPEGAGSCDSGCNGGSMNSAFEYTLKVG------------CNREACKFDRSKIAA 87
           C  +CDPE AGSCDSGCNGG MNSAFEYTLK G             +R ACKFD++K+AA
Sbjct: 193 CDHECDPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGACKFDKTKVAA 252

Query: 88  ASVANFSVVSLDEDQIAANLVENGPLAIAINAVFMQSYIGGVSCPFICSKRLEHGVLLVG 147
            +VANFSV+SLDEDQIAANLV+NGPLA+AINAV+MQ+YIGGVSCP+ICSKRL+HGVLLVG
Sbjct: 253 -TVANFSVISLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSKRLDHGVLLVG 312

Query: 148 YGSA----------DYWIIKNS----WGENGYYRICRGRNICGVDSLVSTVAAVHT 178
           YGSA           YWIIKNS    WGE+GYY+ICRGRN+CGVDS+VSTVAAV T
Sbjct: 313 YGSAGYAPIRLKEKPYWIIKNSWGETWGESGYYKICRGRNVCGVDSMVSTVAAVQT 367

The following BLAST results are available for this feature:

BLAST of CmaCh19G006820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RD19B_ARATH	1.8e-58	68.21	Probable cysteine protease RD19B OS=Arabidopsis thaliana GN=RD19B PE=2 SV=2	[more]
RD19A_ARATH	1.0e-56	64.74	Cysteine protease RD19A OS=Arabidopsis thaliana GN=RD19A PE=1 SV=1	[more]
RD19C_ARATH	6.1e-54	62.15	Probable cysteine protease RD19C OS=Arabidopsis thaliana GN=RD19C PE=2 SV=1	[more]
CYSP_PEA	6.1e-54	61.93	Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1	[more]
CYSP1_MAIZE	3.5e-49	57.22	Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1	[more]

BLAST of CmaCh19G006820 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A059BDD0_EUCGR	6.6e-63	72.16	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G01706 PE=3 SV=1	[more]
A0A0B0PI03_GOSAR	4.3e-62	72.16	Cysteinease RD19a-like protein OS=Gossypium arboreum GN=F383_09016 PE=3 SV=1	[more]
A0A0D2RSY7_GOSRA	1.2e-61	71.59	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G247000 PE=3 SV=1	[more]
F6I1A2_VITVI	2.1e-61	69.32	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g00280 PE=3 SV=...	[more]
A0A067L3H8_JATCU	2.8e-61	69.89	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26761 PE=3 SV=1	[more]

BLAST of CmaCh19G006820 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21430.1	1.0e-59	68.21	Papain family cysteine protease	[more]
AT4G39090.1	5.7e-58	64.74	Papain family cysteine protease	[more]
AT4G16190.1	3.5e-55	62.15	Papain family cysteine protease	[more]
AT3G54940.2	2.2e-46	48.53	Papain family cysteine protease	[more]
AT1G09850.1	3.9e-14	32.52	xylem bark cysteine peptidase 3	[more]

BLAST of CmaCh19G006820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|702402595\|ref\|XP_010066197.1\|	9.4e-63	72.16	PREDICTED: probable cysteine proteinase A494 [Eucalyptus grandis]	[more]
gi\|1009149343\|ref\|XP_015892430.1\|	4.7e-62	71.59	PREDICTED: cysteine proteinase RD19a [Ziziphus jujuba]	[more]
gi\|728844621\|gb\|KHG24064.1\|	6.1e-62	72.16	Cysteinease RD19a -like protein [Gossypium arboreum]	[more]
gi\|823161035\|ref\|XP_012480377.1\|	1.8e-61	71.59	PREDICTED: cysteine proteinase RD19a [Gossypium raimondii]	[more]
gi\|802564032\|ref\|XP_012067202.1\|	4.0e-61	69.89	PREDICTED: probable cysteine proteinase A494 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000668	Peptidase_C1A_C
IPR013128	Peptidase_C1A

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **Molecular Function**
Term	Definition
GO:0008234	cysteine-type peptidase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008234	cysteine-type peptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G006820.1	CmaCh19G006820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000668	Peptidase C1A, papain C-terminal	PFAM	PF00112	Peptidase_C1	coord: 40..171 score: 4.8
IPR000668	Peptidase C1A, papain C-terminal	SMART	SM00645	pept_c1	coord: 2..173 score: 7.3
IPR013128	Peptidase C1A	PANTHER	PTHR12411	CYSTEINE PROTEASE FAMILY C1-RELATED	coord: 32..175 score: 1.6
None	No IPR available	GENE3D	G3DSA:3.90.70.10		coord: 39..172 score: 3.9
None	No IPR available	PANTHER	PTHR12411:SF338	CYSTEINE PROTEINASE RD19A-RELATED	coord: 32..175 score: 1.6
None	No IPR available	unknown	SSF54001	Cysteine proteinases	coord: 38..174 score: 4.91

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh19G006820	Carg04017	Silver-seed gourd	carcmaB1354

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh19G006820	CmaCh02G003710	Cucurbita maxima (Rimu)	cmacmaB452

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh19G006820	Cucumber (Gy14) v2	cgybcmaB208
CmaCh19G006820	Cucumber (Gy14) v2	cgybcmaB213
CmaCh19G006820	Cucumber (Gy14) v2	cgybcmaB944
CmaCh19G006820	Melon (DHL92) v3.6.1	cmamedB536
CmaCh19G006820	Melon (DHL92) v3.6.1	cmamedB541
CmaCh19G006820	Silver-seed gourd	carcmaB0238
CmaCh19G006820	Silver-seed gourd	carcmaB0440
CmaCh19G006820	Wax gourd	cmawgoB0647
CmaCh19G006820	Cucumber (Chinese Long) v3	cmacucB0604
CmaCh19G006820	Cucumber (Chinese Long) v3	cmacucB0609
CmaCh19G006820	Cucumber (Chinese Long) v3	cmacucB0638
CmaCh19G006820	Watermelon (97103) v2	cmawmbB526
CmaCh19G006820	Watermelon (97103) v2	cmawmbB531
CmaCh19G006820	Wax gourd	cmawgoB0641
CmaCh19G006820	Wax gourd	cmawgoB0663
CmaCh19G006820	Wax gourd	cmawgoB0667
CmaCh19G006820	Cucurbita maxima (Rimu)	cmacmaB152
CmaCh19G006820	Cucurbita maxima (Rimu)	cmacmaB444
CmaCh19G006820	Cucumber (Gy14) v1	cgycmaB1038
CmaCh19G006820	Cucurbita moschata (Rifu)	cmacmoB495
CmaCh19G006820	Cucurbita moschata (Rifu)	cmacmoB508
CmaCh19G006820	Cucurbita moschata (Rifu)	cmacmoB519
CmaCh19G006820	Melon (DHL92) v3.5.1	cmameB462
CmaCh19G006820	Watermelon (Charleston Gray)	cmawcgB460
CmaCh19G006820	Watermelon (97103) v1	cmawmB503
CmaCh19G006820	Cucurbita pepo (Zucchini)	cmacpeB522
CmaCh19G006820	Cucurbita pepo (Zucchini)	cmacpeB526
CmaCh19G006820	Cucurbita pepo (Zucchini)	cmacpeB540
CmaCh19G006820	Cucurbita pepo (Zucchini)	cmacpeB547
CmaCh19G006820	Cucurbita pepo (Zucchini)	cmacpeB553
CmaCh19G006820	Bottle gourd (USVL1VR-Ls)	cmalsiB466
CmaCh19G006820	Bottle gourd (USVL1VR-Ls)	cmalsiB472
CmaCh19G006820	Bottle gourd (USVL1VR-Ls)	cmalsiB499