CmaCh19G006790 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh19G006790
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Ubiquitin fusion degradation 1 protein
Location	Cma_Chr19 : 7064026 .. 7069509 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTACGAAATCGATTTCCTTGTACGGGTATTCAAATCGACGCTCACAAGTGAAACCGATCAACTATCTTCTCCGCATCGTTCTTCCTCCAGCTATCGATCATTCATCGGCGACTCGTTCTCGTCTTCGGTACGACTACATTCGCATTCTAGCTTGTGTCTTTTCGATTTTAATTCTATATTGGTTGATCGTCTCGTGATGATGCTCTGGTTGTGTGCTTGCTGAGAAAGCTGAGTGTCTTGAACTTTGAAGTTTCATTATCTTTGCGTTTTTATCCTTCGAATATGCGCATTCGTTTATGAGTAAGCTTATTTGCTGTTATGTTGATCGGAGGTTGTTGGTTACCTGCGGCGGAAGAAAGATAAACATAGCAACTTATGGAGTACTCAGTCTGATGTTTGGTTTATTATTGATTGATTATCGTTGGTGCTAGTTCTGATTTTTTTTTTCTTCATATTACAGTTTAGTCTTATTGTTTGCCTTGGTTTTAATGTTTGATATTGAGGCGGAATGAAACTGAGGATGCTTTTTTTCTTTCTTTCTTTTTCCTGCTGTTTTGACATGAATCAGTTTGATGCTCCTGGCGTCCTTAGTCACGCTGTTTAAGTTGTACTGTGCATTAGCTATTTTTAATTGATTTTGAGGTTTATGATACTGACTTTCTCAAACATTCGGTTTTCCTGCGTTTACAACATGCAGAAGTTCTTCACTGCTCGATTGAGAGCCTTTACGAGGTTGATTATCCGTCGAGGAACTCTACACAGGCTCTACAAAATGGTATGCATGCTTTTTTCAGCTCGTTAAGATGAGAACCTCTGATGTTTTGTAACTGCTCTGGATTCTACGTTACTTGCGTGATTAGAAAATGAAGAAAAGTTACATAGAATGTGTTTTAGACGTTTATGATGCGGAATTGAATTTCATTGACCTACAGAAGGATCTCTTTTCCCTCAATTTAATAAATTATTGCTGCTTTTTGATACACACGTTACTGTTTTATGTTAGTCCTTGACCTGGAGACACCGTGCTTCTTCTGGCTATGGAACACTAAACTTGTTATAGAAATATTTGCTGAGGATTTATCCTAGTGTGGCATGTTTATTTCTGCTGCCTAAACCCTTCTAACTTATATGATATATGTTAGCATGATCAGAGCACTCCTTTTTTTGAAGGAACAAAAATATTTTTATACATCTCACTTGCTAGAAGCAGTGTGCCACTTATATGATATATGATAGCTAGATTTAAGATCATAATGTTTTGAATGTTTCCAATCAATCCAAACCTTGAGGAAGGATTTGAATTGTGTTGAAGTTTACTCTAGCCATGTCCATGTTACAATTTCTGCTATACACTGGCCTCCAATTCCCTGTTTTAGGAGGGTTCTTATTGTGAAGAATTGTTTACATTTTCTGAAAAAAAAAAAAAGAGATTGGTTAGCTTTTGCAACCATTGCAACTCATGTATCTCTATGTTTCTGCGTCTGCAGTATTTTGATGGGTATGGATATCGTGGAACCTCATTTGAGCAAAGATATCAATGCTTCTCTGCATCATTTATTGATAAGGTTCGATTATCTTCTACTTCTATTCACCATTTTTAGAAACGTGCTCAATTGTTGTTTAGTGTTTGGGGTATTCCTTGGCCTCATTGCATTTTCATTCTTTTGCATACATATTAAGGGCCTTCTTCTTCACGATAGCCGATTAAATGTAGGCAGCAGGTGCAATTTGGTCATGTATTTGTTTGAAGTTTGTGCTTGGAGATAGCCGATTAAATGTAGGCAGCAGGTGCAATTTGGTCATGTATTTGTTTGAAGTTTGTGCTTGGAACAAGCATTGGTCATGCATTATTGTTTTTTATAAGCATGGAGTTTCATGTAATATCAAGCAAAGCTACTGCTGCGCATGTTTCCAATTTCTAGGCATATACAGTAGAAAGTAAATATATATTGGAATGTTCTCTTCATCATAAAGAACTTTAGAGTATCTATAATTGCAAGTATATAAGTGAATTATTTCTTATTCCCAAAATAGATAGCTTCTTCTAATCCCAGTTAATCTTTTCCTGCAGCCACACGTTGAAACTGGAGACAGAAGTTAGATAGCTTCTTCTAATCCCAGTTAATCTTTTCCTGCAGCCACACGTTGAAACTGGAGACAGAAGTAAGCTGTTCTATCTTTACCCTTTTTATGGTTTAGGTTTCATTTCCTTTCTTAACGTTTTTTTTTTTATTTCCTTTTCTTAAGTTTCTAATGTTGTTTATTTTAATTATTTTTTCAGTCATAATGCCTCCATTTATTTCCTTTTCTTAAGTTTCTAATGTTGTTTATTTTAATTATTTTTTCAGTCATAATGCCTCCATCAGCCCTTGATCGACTTGGTTTGTTGCCATATTCTTAGAAGTCATTTTTGTTCTCCTATTTTTTCTGTTGTGTTTTTCATCATTGGTGACTGATTTTAAATACAACCCCCTGCAGCATCTTTACAAATTGATTATCCAATGTTATTTGAGTTTCGAAATGATGCTGTTGAGCGAGTCTCTCATTGTGGGGTTTTGGAGTTTGTTGCAGAAGAAGGCATGATTTACATGCCTTATTGGGTAGGGTTCCCTATTTCTCTTATGTGATGTGTCCCAGGTGTTATTGACTCTTTCTTATATCCTGTCGTATAACTTTTCCACTTCTGTTCTAATTGTTTCCCCTTCAGATGATGGAGAACATGCTTTTGCAAGAAGGAGACTTGGTGCATGTGAAGAATGTCACTCTTCCAAAGGGAACTTATGTTAAATTACAACCTCACACAAAGGACTTTCTGGATATCTCCAATCCAAAAGCAATGTAAGATATTTGTTCAAGTTTTAGTTTGTGAAACATGTGTCTAGTCTTCTACTTTCTTGTATTTCTAGCTTGTGTCACAGAAAGGAGTTCATTCTAAAGTTGAAATCCTCAGCCATTTTCTTATTAATTTTTAGATGAGCTCTTTAACCTCTAATAAACTAGCCACTATACAACCTATAGTATAACCTTAAGCCCGATAAGTGCACAAAACGCTCGAACATCAAATAACCAACCATGGGTTGATGTTGACCCAATGGTAAAACTAGGCAGCTCTAATCGAATGTTTTTGAAGCTATGGGTTCAAAGCTCAGTAGTCACTTAGAATGTCGAGTATAACGAGCAAGTTTTTTGACATCTAGGATTAAACTATTTATCCTTAAGATAAGTTAAAGGTATAGGCCAGCTATTCCAAATCTCTCTCTCTCTCTCTCCCCTTTTCTTATTGTCATTGTCTTTCAAAGATCACATGTGATTTCACTATCTCTAATGGTTGGTGTGATGAAGTTCGTTTCACAGAGCAGTTTATTTATTTATGTCATACAGCTTAGAGACAACACTTAGGAATTTCTCCTGCCTCACCACCGGAGACAGTATTATGGTGGCATATAACAACAAGAAATATTACATTGACATAGTCGAAACAAGGCCATCCAATGCAATAAGTATCATTGAGACAGATTGTGAGGTCGATTTTGCACCTCCCCTGGATTACAAGGAACCGGAGAAGCCTGTTGCACCAACCAAGGGGAAGGAGCAAGGTACACAGCTTCTACTCTTTTTTTCCAATTCTTACTGCAAATTTGGTTTTCTATTTTACTTTTGAAATAGATGTTTTGTCTAAATCAGTTTCTTTGCTTGAGGAATTGAAAATCAGAAGGCCACCGTTTACTGGTTCTAGATTATATGTAATGAACTCTCTTGTCAGTTGCAGAGGCGATAGAACCAGAAGCTGAACCCAAATTTGTCGCTTTCACGGGAACAGGAAGACGTTTGGATGGTAAATCTTCAAACTACCAGCCTCAGCCAATTTCATCGGCGGCAAGACCATCTGATGTGAAGCAATCGGGCGGTAGTAGCAGCAGCAGATATGGCCATTCACAACAGTCTGCTGGGTCTAGCTCAGTGAAAATCGGGCGGTAGTAGCAGCAGCAGATATGGCCATTCACAACAGTCTGCTGGGTCTAGCTCAGTGAACGGAACTCGTCGGTCTCATGGAAAGTTGGTGTTTGGACAAAATGCTCATCGAAATCCTAATGAAAATCCAAAGGTACCCCCACTTTACACAAATGATCCTCTAATTTTAAGTCAATTTATAAGTTTAATCTTATCCAAAGGTACCCCCACTTTACACAAATGATCCTCTAATTTTAAGTCAATTTATAAGTTTAATCTTAATTTTGAGGTTGGTGTCTATTTTATCCCTGATTTTTATTCTAATACATATATAAACTTTTTAAATGACTAATTTACTTATGTCTATCAATTTTCAAGATTTTTATTCTAATACATATATAAACTTTTTAAATGACTAATTTACTTATGTCTATCAATTTTCAATTTTGTGCGTTGAACTTTAAAAATGTTTTATTGGTTCTTTATTTTGTGTTTTAATATGTTATGATATATTCAACTTTTTTTTAAAAAAAATGAATTAATCTATTCGATATGAATTTGAATTTTATGTCTAATTGAACCTAAAACTTTAGAATTGTACCTACTAGACTAAAAAATAATGATTTGGTTATAATAATTGTACCTACTTTAAAAGTTTAATAACTAAAAATGTGATTTAACCTTCAAATTATTGCATTTGCCGGTTAATTCATAAACTTAATTTGTAGTTTTAACCTTTCTTTTGCCACTTAATTTATTTCCTGATAATCAGCCTTTTATTATTATTATTATTATTTGTGATTTTGTAGGAGGCCTCGAAAGAGAGTAAACAAGAGCAGCCTGGAAAGGAAGAGCCCAAATTTCAGGCCTTCTCTGGAAAAAGGTACTCGCTGAGAGGTTGATTTGATTGTCTAATATCCATGCCTATAAATATATTTAATTTAGCTCTAAGTTGTTGGAATACACATTTACGCGGCCGTTTCATAGCCAACAGAAGCTCCTAATGTAGTTAAAAGTCGTGCCTCAGTTATGCCCATAGCTTTATGACCAAATATTTGATCTCCTTCTCCACTACAATCTAATCTTGTCTGCGTCCATTGTATTTGAGAAGGAAACCAAAAACCAATAAATAAAATACAAAACTACATCACAATTAAAGTCATAACAAAAAAGAAAAGAGAAGAAAAGAATTTAATAAGAATGGAAGACACACTTAGGAGAGAATGGCCTTGAGTGCCTCTTTCACAGTCGGGTACTTGAATGTAAAACCCAGTTCCTTGGCTCTCGTGGGAACCACCCGTTGACCCTCCAAAACCTGTAGCAAAGGCCAGCTCAACTTAAAATAGGAGTTTGGCTAACATTATTTTGGCCTCTATACACATTCAATTCCATCTTAGATCTTTACTTCTTGCAATTAATCTTAAATTCAGTCCTTCCAATTAATTTTTATGAAAATTAATAATAATTTAAATAACAGAAAAGATACTATGGGAGTACATTTCTAAAATTTATAGAACAGGATGCTACAA

mRNA sequence

ATGTTTACGAAATCGATTTCCTTGTACGGCTATCGATCATTCATCGGCGACTCGTTCTCGTCTTCGAAGTTCTTCACTGCTCGATTGAGAGCCTTTACGAGGTTGATTATCCGTCGAGGAACTCTACACAGGCTCTACAAAATGTATTTTGATGGGTATGGATATCGTGGAACCTCATTTGAGCAAAGATATCAATGCTTCTCTGCATCATTTATTGATAAGCCACACGTTGAAACTGGAGACAGAATCATAATGCCTCCATCAGCCCTTGATCGACTTGCATCTTTACAAATTGATTATCCAATGTTATTTGAGTTTCGAAATGATGCTGTTGAGCGAGTCTCTCATTGTGGGGTTTTGGAGTTTGTTGCAGAAGAAGGCATGATTTACATGCCTTATTGGATGATGGAGAACATGCTTTTGCAAGAAGGAGACTTGGTGCATGTGAAGAATGTCACTCTTCCAAAGGGAACTTATGTTAAATTACAACCTCACACAAAGGACTTTCTGGATATCTCCAATCCAAAAGCAATCTTAGAGACAACACTTAGGAATTTCTCCTGCCTCACCACCGGAGACAGTATTATGGTGGCATATAACAACAAGAAATATTACATTGACATAGTCGAAACAAGGCCATCCAATGCAATAAGTATCATTGAGACAGATTGTGAGGTCGATTTTGCACCTCCCCTGGATTACAAGGAACCGGAGAAGCCTGTTGCACCAACCAAGGGGAAGGAGCAAGTTGCAGAGGCGATAGAACCAGAAGCTGAACCCAAATTTGTCGCTTTCACGGGAACAGGAAGACGTTTGGATGGTAAATCTTCAAACTACCAGCCTCAGCCAATTTCATCGGCGGCAAGACCATCTGATGTGAAGCAATCGGGCGGTAGTAGCAGCAGCAGATATGGCCATTCACAACAGTCTGCTGGCTCAGTGAACGGAACTCGTCGGTCTCATGGAAAGTTGGTGTTTGGACAAAATGCTCATCGAAATCCTAATGAAAATCCAAAGGAGGCCTCGAAAGAGAGTAAACAAGAGCAGCCTGGAAAGGAAGAGCCCAAATTTCAGGCCTTCTCTGGAAAAAGGTACTCGCTGAGAGGTTGATTTGATTGTCTAATATCCATGCCTATAAATATATTTAATTTAGCTCTAAGTTGTTGGAATACACATTTACGCGGCCGTTTCATAGCCAACAGAAGCTCCTAATGTAGTTAAAAGTCGTGCCTCAGTTATGCCCATAGCTTTATGACCAAATATTTGATCTCCTTCTCCACTACAATCTAATCTTGTCTGCGTCCATTGTATTTGAGAAGGAAACCAAAAACCAATAAATAAAATACAAAACTACATCACAATTAAAGTCATAACAAAAAAGAAAAGAGAAGAAAAGAATTTAATAAGAATGGAAGACACACTTAGGAGAGAATGGCCTTGAGTGCCTCTTTCACAGTCGGGTACTTGAATGTAAAACCCAGTTCCTTGGCTCTCGTGGGAACCACCCGTTGACCCTCCAAAACCTGTAGCAAAGGCCAGCTCAACTTAAAATAGGAGTTTGGCTAACATTATTTTGGCCTCTATACACATTCAATTCCATCTTAGATCTTTACTTCTTGCAATTAATCTTAAATTCAGTCCTTCCAATTAATTTTTATGAAAATTAATAATAATTTAAATAACAGAAAAGATACTATGGGAGTACATTTCTAAAATTTATAGAACAGGATGCTACAA

Coding sequence (CDS)

ATGTTTACGAAATCGATTTCCTTGTACGGCTATCGATCATTCATCGGCGACTCGTTCTCGTCTTCGAAGTTCTTCACTGCTCGATTGAGAGCCTTTACGAGGTTGATTATCCGTCGAGGAACTCTACACAGGCTCTACAAAATGTATTTTGATGGGTATGGATATCGTGGAACCTCATTTGAGCAAAGATATCAATGCTTCTCTGCATCATTTATTGATAAGCCACACGTTGAAACTGGAGACAGAATCATAATGCCTCCATCAGCCCTTGATCGACTTGCATCTTTACAAATTGATTATCCAATGTTATTTGAGTTTCGAAATGATGCTGTTGAGCGAGTCTCTCATTGTGGGGTTTTGGAGTTTGTTGCAGAAGAAGGCATGATTTACATGCCTTATTGGATGATGGAGAACATGCTTTTGCAAGAAGGAGACTTGGTGCATGTGAAGAATGTCACTCTTCCAAAGGGAACTTATGTTAAATTACAACCTCACACAAAGGACTTTCTGGATATCTCCAATCCAAAAGCAATCTTAGAGACAACACTTAGGAATTTCTCCTGCCTCACCACCGGAGACAGTATTATGGTGGCATATAACAACAAGAAATATTACATTGACATAGTCGAAACAAGGCCATCCAATGCAATAAGTATCATTGAGACAGATTGTGAGGTCGATTTTGCACCTCCCCTGGATTACAAGGAACCGGAGAAGCCTGTTGCACCAACCAAGGGGAAGGAGCAAGTTGCAGAGGCGATAGAACCAGAAGCTGAACCCAAATTTGTCGCTTTCACGGGAACAGGAAGACGTTTGGATGGTAAATCTTCAAACTACCAGCCTCAGCCAATTTCATCGGCGGCAAGACCATCTGATGTGAAGCAATCGGGCGGTAGTAGCAGCAGCAGATATGGCCATTCACAACAGTCTGCTGGCTCAGTGAACGGAACTCGTCGGTCTCATGGAAAGTTGGTGTTTGGACAAAATGCTCATCGAAATCCTAATGAAAATCCAAAGGAGGCCTCGAAAGAGAGTAAACAAGAGCAGCCTGGAAAGGAAGAGCCCAAATTTCAGGCCTTCTCTGGAAAAAGGTACTCGCTGAGAGGTTGA

Protein sequence

MFTKSISLYGYRSFIGDSFSSSKFFTARLRAFTRLIIRRGTLHRLYKMYFDGYGYRGTSFEQRYQCFSASFIDKPHVETGDRIIMPPSALDRLASLQIDYPMLFEFRNDAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLQEGDLVHVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETRPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAIEPEAEPKFVAFTGTGRRLDGKSSNYQPQPISSAARPSDVKQSGGSSSSRYGHSQQSAGSVNGTRRSHGKLVFGQNAHRNPNENPKEASKESKQEQPGKEEPKFQAFSGKRYSLRG

Homology

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BLAST of CmaCh19G006790 vs. Swiss-Prot
Match: UFD1_RAT (Ubiquitin fusion degradation protein 1 homolog OS=Rattus norvegicus GN=Ufd1l PE=1 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 2.0e-64
Identity = 140/313 (44.73%), Postives = 191/313 (61.02%), Query Frame = 1


Query: 60  FEQRYQCFSASFI----DKPHVETGDRIIMPPSALDRLASLQIDYPMLFEFRNDAVERVS 119
           F  +Y+CFS S +    D+  VE G +IIMPPSALD+L+ L I YPMLF+  N   +R++
Sbjct: 19  FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78

Query: 120 HCGVLEFVAEEGMIYMPYWMMENMLLQEGDLVHVKNVTLPKGTYVKLQPHTKDFLDISNP 179
           HCGVLEFVA+EG+ Y+P+WMM+N+LL+EG LV V++V L   TY K QP + DFLDI+NP
Sbjct: 79  HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138

Query: 180 KAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETRPSNAISIIETDCEVDFAPPLDYK 239
           KA+LE  LRNF+CLTTGD I + YN K Y + ++ET+P  A+SIIE D  VDF  PL YK
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198

Query: 240 EPEKPVAPTKGKEQVAEAIEPEAEPKFVAFTGTGRRLDGKSSNYQPQPISSAARPSDVKQ 299
           EPE+PV   +  E  A+      E  F AF+G+G RLDGK    +P P  S  +P D+K+
Sbjct: 199 EPERPVQHEESIEGEADHSGYAGEVGFRAFSGSGNRLDGKKKGVEPSP--SPIKPGDIKR 258

Query: 300 SGGSSSSRYGHSQQSAGSVNGTRRSHGKLVFGQNAHRNPNENPKEASKESKQEQPGKEEP 359
                             +       GK+ F +N+        +   K+ ++++ G    
Sbjct: 259 -----------------GIPNYEFKLGKITFIRNS--------RPMVKKVEEDEAG---G 301

Query: 360 KFQAFSGKRYSLR 369
           +F AFSG+  SLR
Sbjct: 319 RFVAFSGEGQSLR 301

[Close]

BLAST of CmaCh19G006790 vs. Swiss-Prot
Match: UFD1_MOUSE (Ubiquitin fusion degradation protein 1 homolog OS=Mus musculus GN=Ufd1l PE=1 SV=2)

HSP 1 Score: 247.3 bits (630), Expect = 2.6e-64
Identity = 140/313 (44.73%), Postives = 191/313 (61.02%), Query Frame = 1


Query: 60  FEQRYQCFSASFI----DKPHVETGDRIIMPPSALDRLASLQIDYPMLFEFRNDAVERVS 119
           F  +Y+CFS S +    D+  VE G +IIMPPSALD+L+ L I YPMLF+  N   +R++
Sbjct: 19  FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78

Query: 120 HCGVLEFVAEEGMIYMPYWMMENMLLQEGDLVHVKNVTLPKGTYVKLQPHTKDFLDISNP 179
           HCGVLEFVA+EG+ Y+P+WMM+N+LL+EG LV V++V L   TY K QP + DFLDI+NP
Sbjct: 79  HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138

Query: 180 KAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETRPSNAISIIETDCEVDFAPPLDYK 239
           KA+LE  LRNF+CLTTGD I + YN K Y + ++ET+P  A+SIIE D  VDF  PL YK
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198

Query: 240 EPEKPVAPTKGKEQVAEAIEPEAEPKFVAFTGTGRRLDGKSSNYQPQPISSAARPSDVKQ 299
           EPE+PV   +  E  A+      E  F AF+G+G RLDGK    +P P  S  +P D+K+
Sbjct: 199 EPERPVQHEESIEGEADHSGYAGEVGFRAFSGSGNRLDGKKKGVEPSP--SPIKPGDIKR 258

Query: 300 SGGSSSSRYGHSQQSAGSVNGTRRSHGKLVFGQNAHRNPNENPKEASKESKQEQPGKEEP 359
                             +       GK+ F +N+        +   K+ ++++ G    
Sbjct: 259 -----------------GIPNYEFKLGKITFIRNS--------RPLVKKVEEDEAG---G 301

Query: 360 KFQAFSGKRYSLR 369
           +F AFSG+  SLR
Sbjct: 319 RFIAFSGEGQSLR 301

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BLAST of CmaCh19G006790 vs. Swiss-Prot
Match: UFD1_HUMAN (Ubiquitin fusion degradation protein 1 homolog OS=Homo sapiens GN=UFD1L PE=1 SV=3)

HSP 1 Score: 245.0 bits (624), Expect = 1.3e-63
Identity = 139/313 (44.41%), Postives = 190/313 (60.70%), Query Frame = 1


Query: 60  FEQRYQCFSASFI----DKPHVETGDRIIMPPSALDRLASLQIDYPMLFEFRNDAVERVS 119
           F  +Y+CFS S +    D+  VE G +IIMPPSALD+L+ L I YPMLF+  N   +R++
Sbjct: 19  FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78

Query: 120 HCGVLEFVAEEGMIYMPYWMMENMLLQEGDLVHVKNVTLPKGTYVKLQPHTKDFLDISNP 179
           HCGVLEFVA+EG+ Y+P+WMM+N+LL+EG LV V++V L   TY K QP + DFLDI+NP
Sbjct: 79  HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138

Query: 180 KAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETRPSNAISIIETDCEVDFAPPLDYK 239
           KA+LE  LRNF+CLTTGD I + YN K Y + ++ET+P  A+SIIE D  VDF  PL YK
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198

Query: 240 EPEKPVAPTKGKEQVAEAIEPEAEPKFVAFTGTGRRLDGKSSNYQPQPISSAARPSDVKQ 299
           EPE+ V   +  E  A+      E  F AF+G+G RLDGK    +P P  S  +P D+K+
Sbjct: 199 EPERQVQHEESTEGEADHSGYAGELGFRAFSGSGNRLDGKKKGVEPSP--SPIKPGDIKR 258

Query: 300 SGGSSSSRYGHSQQSAGSVNGTRRSHGKLVFGQNAHRNPNENPKEASKESKQEQPGKEEP 359
                             +       GK+ F +N+        +   K+ ++++ G    
Sbjct: 259 -----------------GIPNYEFKLGKITFIRNS--------RPLVKKVEEDEAG---G 301

Query: 360 KFQAFSGKRYSLR 369
           +F AFSG+  SLR
Sbjct: 319 RFVAFSGEGQSLR 301

[Close]

BLAST of CmaCh19G006790 vs. Swiss-Prot
Match: UFD1_DICDI (Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum GN=ufd1 PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.0e-59
Identity = 124/294 (42.18%), Postives = 181/294 (61.56%), Query Frame = 1


Query: 60  FEQRYQCFSASFI--DKPHVETGDRIIMPPSALDRLASLQIDYPMLFEFRNDAVERVSHC 119
           +EQ+++ F  SF+  +K  +E+G +I++PPSAL+ L+ L I YPMLFE  N    + SHC
Sbjct: 25  YEQKFKAFPISFLPKEKHSLESGGKILLPPSALNALSRLNIQYPMLFEISNPISGKKSHC 84

Query: 120 GVLEFVAEEGMIYMPYWMMENMLLQEGDLVHVKNVTLPKGTYVKLQPHTKDFLDISNPKA 179
           GVLEF+AEEG+ Y+P WMM+N+ L+EG+ + +KN TL KGT+VK+QP T +F+DISNPKA
Sbjct: 85  GVLEFIAEEGICYLPLWMMQNLQLKEGEFIDIKNATLAKGTFVKIQPRTSNFIDISNPKA 144

Query: 180 ILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETRPSNAISIIETDCEVDFAPPLDYKEP 239
           +LE +LR F+ LT  D IM+ YNN KYY+ +VE +P+NAISIIE D  VDFAPP+D KE 
Sbjct: 145 VLENSLRKFATLTKDDEIMIDYNNTKYYLKVVELKPANAISIIEADVSVDFAPPMDSKEA 204

Query: 240 EKPV---------APTKG-------------------KEQVAEAIEPEAEPKFVAFTGTG 299
             P           P+KG                   K++     + + EPKF AF GTG
Sbjct: 205 TSPSTSSPGSHVSGPSKGLTFGPASTSAKPIPGGKKKKDESDSDSDSDDEPKFKAFAGTG 264

Query: 300 RRLDGKSSNYQPQPISSAARPSDVKQSGGSSSSRYGHSQQSAGSVNGTRRSHGK 324
            RLDGK       P+ ++  P  +  +  ++++   ++  +  + N +  ++ K
Sbjct: 265 ARLDGKVGT----PLGTS--PKTLNTNNNNNNNNNNNNNNNNNNNNNSNNNNTK 312

[Close]

BLAST of CmaCh19G006790 vs. Swiss-Prot
Match: UFD1_DROME (Ubiquitin fusion degradation protein 1 homolog OS=Drosophila melanogaster GN=Ufd1-like PE=2 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 6.3e-58
Identity = 114/241 (47.30%), Postives = 156/241 (64.73%), Query Frame = 1


Query: 49  YFDGYGY---RGTSFEQRYQCFSASFI---DKPHVETGDRIIMPPSALDRLASLQIDYPM 108
           +F G+      G +F   Y+CFS S +   ++  VE G +IIMPPSALD L  L ++YPM
Sbjct: 3   HFSGFNMMFPEGRNFHANYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEYPM 62

Query: 109 LFEFRNDAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLQEGDLVHVKNVTLPKGTYVKL 168
           LF+  N    R SH GVLEFVA+EG  Y+P+WMMEN+LL EGD++++++V+LP  T+ K 
Sbjct: 63  LFKLTNVKKSRSSHAGVLEFVADEGKCYLPHWMMENLLLGEGDILNIESVSLPVATFSKF 122

Query: 169 QPHTKDFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETRPSNAISIIET 228
           QPH+ DFLDI+NPKA+LE  LRNF+CLT GD I + YN K Y + ++ET+P NA+SIIE 
Sbjct: 123 QPHSTDFLDITNPKAVLENALRNFACLTRGDVIAIKYNKKVYELCVLETKPGNAVSIIEC 182

Query: 229 DCEVDFAPPLDYKEPEKPVAPTKGKE--------QVAEAIEPEAEPKFVAFTGTGRRLDG 276
           D  V+F  P+ YK+  +  A   G++        ++A A     E     F G+G RLDG
Sbjct: 183 DMNVEFEAPVGYKDHSETQASGSGQQGAAGTVGGEIAGATNAILEEVVETFKGSGVRLDG 242

[Close]

BLAST of CmaCh19G006790 vs. TrEMBL
Match: A0A0A0K0F7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G006300 PE=4 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 3.2e-165
Identity = 305/356 (85.67%), Postives = 323/356 (90.73%), Query Frame = 1


Query: 17  DSFSSSKFFTARLRAFTRLIIRRGTLHRLYKMYFDGYGYRGTSFEQRYQCFSASFIDKPH 76
           + F +  FFT R  AF RLI RRGTL+RLYKMYFDGYGYRGTSFEQ YQCFS SFIDKPH
Sbjct: 97  NQFYALGFFTTRFGAFRRLINRRGTLYRLYKMYFDGYGYRGTSFEQSYQCFSTSFIDKPH 156

Query: 77  VETGDRIIMPPSALDRLASLQIDYPMLFEFRNDAVERVSHCGVLEFVAEEGMIYMPYWMM 136
           +ETGDRIIMPPSALDRLASLQIDYPMLFE RNDAVERVSHCGVLEFVAEEGMIYMPYWMM
Sbjct: 157 LETGDRIIMPPSALDRLASLQIDYPMLFELRNDAVERVSHCGVLEFVAEEGMIYMPYWMM 216

Query: 137 ENMLLQEGDLVHVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTGDSIM 196
           ENM+LQEGDLV VKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTGDSIM
Sbjct: 217 ENMVLQEGDLVRVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTGDSIM 276

Query: 197 VAYNNKKYYIDIVETRPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAIEP 256
           VAYNNKKYYIDIVET+PSNAISIIETDCEVDFAPPLDYKEPEK VAPTKGKEQVAEA + 
Sbjct: 277 VAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKLVAPTKGKEQVAEAPDS 336

Query: 257 EAEPKFVAFTGTGRRLDGKSSNYQPQPISSAARPSDVKQSGGSSSSRYGHSQQSAG---S 316
           EAEPKF AFTGTGRRLDGKSSN+QPQPISS +R +D KQSGG  SSRYGH+QQSAG   S
Sbjct: 337 EAEPKFSAFTGTGRRLDGKSSNHQPQPISS-SRSADAKQSGG--SSRYGHAQQSAGSSSS 396

Query: 317 VNGTRRSHGKLVFGQNAHRNPNENPKEASKESKQEQPGKEEPKFQAFSGKRYSLRG 370
           VNG R+S GKLVFGQNA+RNP E PKEASKESK+++  K+ PKFQ F+GKRYSLRG
Sbjct: 397 VNGIRQSQGKLVFGQNANRNPKETPKEASKESKKDEAEKDNPKFQPFAGKRYSLRG 449

[Close]

BLAST of CmaCh19G006790 vs. TrEMBL
Match: U5GJ40_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s17010g PE=4 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 4.8e-129
Identity = 247/328 (75.30%), Postives = 274/328 (83.54%), Query Frame = 1


Query: 48  MYFDGYGYRGTSFEQRYQCFSASFIDKPHVETGDRIIMPPSALDRLASLQIDYPMLFEFR 107
           M+FDGYGYRGTSFEQ Y+C+ ASFI+KP +E+GD+IIMPPSALDRLASL IDYPMLFE R
Sbjct: 1   MFFDGYGYRGTSFEQTYRCYPASFIEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELR 60

Query: 108 NDAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLQEGDLVHVKNVTLPKGTYVKLQPHTK 167
           N A ERVSHCGVLEF+AEEGMIYMPYWMMEN+LLQEGD+V VKNVTLPKG YVKLQPHTK
Sbjct: 61  NAAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGKYVKLQPHTK 120

Query: 168 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETRPSNAISIIETDCEVD 227
           DFLDISNPKAILETTLRN+SCLTTGDSIMVAYNNKKYYIDIVET+PSNAISIIETDCEVD
Sbjct: 121 DFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVD 180

Query: 228 FAPPLDYKEPEKPVA---PTKGKEQVAEAIEPEAEPKFVAFTGTGRRLDGKSSNYQPQPI 287
           FAPPLDYKEPEKPVA   P+K   Q AE +  E EPKF  FTGTGRRLDGK  +YQP P+
Sbjct: 181 FAPPLDYKEPEKPVASVPPSKATSQ-AEEVPAETEPKFNPFTGTGRRLDGKPMSYQPPPV 240

Query: 288 SSAARPSDVKQSGGSSSSRYGHSQQSAGSV--NGTRRSHGKLVFGQNAHRNPNENPKEAS 347
           SS ++    KQ   ++ SR    Q S GS+  N  R+S GKLVFG NA R+P E  + A 
Sbjct: 241 SSGSKD---KQPAVANDSR----QPSLGSISKNTARQSQGKLVFGSNASRSPKETQQGAG 300

Query: 348 KESKQEQPGKEE-PKFQAFSGKRYSLRG 370
           KE+KQEQP KEE PKFQAFSGK+YSL+G
Sbjct: 301 KETKQEQPKKEERPKFQAFSGKKYSLKG 320

[Close]

BLAST of CmaCh19G006790 vs. TrEMBL
Match: U5GFU1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s17010g PE=4 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 1.8e-128
Identity = 246/327 (75.23%), Postives = 273/327 (83.49%), Query Frame = 1


Query: 49  YFDGYGYRGTSFEQRYQCFSASFIDKPHVETGDRIIMPPSALDRLASLQIDYPMLFEFRN 108
           +FDGYGYRGTSFEQ Y+C+ ASFI+KP +E+GD+IIMPPSALDRLASL IDYPMLFE RN
Sbjct: 3   FFDGYGYRGTSFEQTYRCYPASFIEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRN 62

Query: 109 DAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLQEGDLVHVKNVTLPKGTYVKLQPHTKD 168
            A ERVSHCGVLEF+AEEGMIYMPYWMMEN+LLQEGD+V VKNVTLPKG YVKLQPHTKD
Sbjct: 63  AAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGKYVKLQPHTKD 122

Query: 169 FLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETRPSNAISIIETDCEVDF 228
           FLDISNPKAILETTLRN+SCLTTGDSIMVAYNNKKYYIDIVET+PSNAISIIETDCEVDF
Sbjct: 123 FLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDF 182

Query: 229 APPLDYKEPEKPVA---PTKGKEQVAEAIEPEAEPKFVAFTGTGRRLDGKSSNYQPQPIS 288
           APPLDYKEPEKPVA   P+K   Q AE +  E EPKF  FTGTGRRLDGK  +YQP P+S
Sbjct: 183 APPLDYKEPEKPVASVPPSKATSQ-AEEVPAETEPKFNPFTGTGRRLDGKPMSYQPPPVS 242

Query: 289 SAARPSDVKQSGGSSSSRYGHSQQSAGSV--NGTRRSHGKLVFGQNAHRNPNENPKEASK 348
           S ++    KQ   ++ SR    Q S GS+  N  R+S GKLVFG NA R+P E  + A K
Sbjct: 243 SGSKD---KQPAVANDSR----QPSLGSISKNTARQSQGKLVFGSNASRSPKETQQGAGK 302

Query: 349 ESKQEQPGKEE-PKFQAFSGKRYSLRG 370
           E+KQEQP KEE PKFQAFSGK+YSL+G
Sbjct: 303 ETKQEQPKKEERPKFQAFSGKKYSLKG 321

[Close]

BLAST of CmaCh19G006790 vs. TrEMBL
Match: C6TB96_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 1.9e-125
Identity = 244/325 (75.08%), Postives = 265/325 (81.54%), Query Frame = 1


Query: 48  MYFDGYGYRGTSFEQRYQCFSASFIDKPHVETGDRIIMPPSALDRLASLQIDYPMLFEFR 107
           M+FDGYGY GTSFEQ Y+C+ ASFI+KP +E+GD+IIMPPSALDRLASL IDYPMLFE R
Sbjct: 1   MFFDGYGYHGTSFEQIYRCYPASFIEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELR 60

Query: 108 NDAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLQEGDLVHVKNVTLPKGTYVKLQPHTK 167
           NDA ERVSHCGVLEF+AEEGMIYMPYWMMENMLLQEGD+V VKNVTLPKGTYVKLQPHTK
Sbjct: 61  NDAAERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDIVKVKNVTLPKGTYVKLQPHTK 120

Query: 168 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETRPSNAISIIETDCEVD 227
           DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDI+ET+P NAISIIETDCEVD
Sbjct: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPDNAISIIETDCEVD 180

Query: 228 FAPPLDYKEPEKPVAP-TKGKEQV-AEAIEPEAEPKFVAFTGTGRRLDGKSSNYQPQPIS 287
           FAPPLDYKEPEKP+AP + GK  V AE    E EPKF  F+GTGRRLDGK  NYQP P+S
Sbjct: 181 FAPPLDYKEPEKPIAPLSAGKAAVAAEETPAEEEPKFSPFSGTGRRLDGKPLNYQPPPVS 240

Query: 288 SAARPSDVKQSGGSSSSRYGHSQQSAGSVNGTRRSHGKLVFGQNAHRNPNENPKEASKES 347
           S+           S SS    SQ +A      R+S GKLVFG NA+R  NE  K  +KES
Sbjct: 241 SSGSKDQKSDVVNSLSSTASSSQSNA------RQSQGKLVFGSNANRT-NETGK--AKES 300

Query: 348 KQEQP-GKEEPKFQAFSGKRYSLRG 370
           K E P  KEEPKFQ FSGK+YSLRG
Sbjct: 301 KPEPPKEKEEPKFQPFSGKKYSLRG 316

[Close]

BLAST of CmaCh19G006790 vs. TrEMBL
Match: I1KQB3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G045500 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 2.4e-125
Identity = 244/325 (75.08%), Postives = 265/325 (81.54%), Query Frame = 1


Query: 48  MYFDGYGYRGTSFEQRYQCFSASFIDKPHVETGDRIIMPPSALDRLASLQIDYPMLFEFR 107
           M+FDGYGY GTSFEQ Y+C+ ASFI+KP +E+GD+IIMPPSALDRLASL IDYPMLFE R
Sbjct: 1   MFFDGYGYHGTSFEQIYRCYPASFIEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELR 60

Query: 108 NDAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLQEGDLVHVKNVTLPKGTYVKLQPHTK 167
           NDA ERVSHCGVLEF+AEEGMIYMPYWMMENMLLQEGD+V VKNVTLPKGTYVKLQPHTK
Sbjct: 61  NDAAERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDIVKVKNVTLPKGTYVKLQPHTK 120

Query: 168 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETRPSNAISIIETDCEVD 227
           DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDI+ET+P NAISIIETDCEVD
Sbjct: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPDNAISIIETDCEVD 180

Query: 228 FAPPLDYKEPEKPVAP-TKGKEQV-AEAIEPEAEPKFVAFTGTGRRLDGKSSNYQPQPIS 287
           FAPPLDYKEPEKP+AP + GK  V AE    E EPKF  F+GTGRRLDGK  NYQP P+S
Sbjct: 181 FAPPLDYKEPEKPIAPLSAGKAAVAAEETPAEEEPKFNPFSGTGRRLDGKPLNYQPPPVS 240

Query: 288 SAARPSDVKQSGGSSSSRYGHSQQSAGSVNGTRRSHGKLVFGQNAHRNPNENPKEASKES 347
           S+           S SS    SQ +A      R+S GKLVFG NA+R  NE  K  +KES
Sbjct: 241 SSGSKDQKSDVVNSLSSTASSSQSNA------RQSQGKLVFGSNANRT-NETGK--AKES 300

Query: 348 KQEQP-GKEEPKFQAFSGKRYSLRG 370
           K E P  KEEPKFQ FSGK+YSLRG
Sbjct: 301 KPEPPKEKEEPKFQPFSGKKYSLRG 316

[Close]

BLAST of CmaCh19G006790 vs. TAIR10
Match: AT2G21270.3 (AT2G21270.3 ubiquitin fusion degradation 1)

HSP 1 Score: 429.5 bits (1103), Expect = 2.1e-120
Identity = 222/326 (68.10%), Postives = 258/326 (79.14%), Query Frame = 1


Query: 48  MYFDGYGYRGTSFEQRYQCFSASFIDKPHVETGDRIIMPPSALDRLASLQIDYPMLFEFR 107
           M+FDGY Y GT+FEQ Y+C+ ASFIDKP +E+GD+IIMPPSALDRLASL IDYPMLFE R
Sbjct: 22  MFFDGYHYHGTTFEQSYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELR 81

Query: 108 NDAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLQEGDLVHVKNVTLPKGTYVKLQPHTK 167
           N  +ERV+HCGVLEF+AEEGMIYMPYWMM+N+LLQEGD+V V+NVTLPKGTYVKLQPHT 
Sbjct: 82  NAGIERVTHCGVLEFIAEEGMIYMPYWMMQNLLLQEGDIVRVRNVTLPKGTYVKLQPHTT 141

Query: 168 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETRPSNAISIIETDCEVD 227
           DFLDISNPKAILET LRN+SCLT+GDSIMV YNNKKY+IDIVET+P+NAISIIETDCEVD
Sbjct: 142 DFLDISNPKAILETALRNYSCLTSGDSIMVPYNNKKYFIDIVETKPANAISIIETDCEVD 201

Query: 228 FAPPLDYKEPEKPVAPTKGKEQV-AEAIEPEAEPKFVAFTGTGRRLDGKSSNYQPQPISS 287
           FAPPLDYKEPE+P AP+  K    AE +  E EPKF  FTG+GRRLDG+   Y+P P SS
Sbjct: 202 FAPPLDYKEPERPTAPSAAKGPAKAEEVVDEPEPKFNPFTGSGRRLDGRPLAYEPAPASS 261

Query: 288 AARPSDVKQSGGSSSSRYGHSQQSAGSVNGTRRSHGKLVFGQNAHRNPNE-NPK--EASK 347
           +     V  +G   SS    S+++        R+ GKLVFG N +R P E  PK   A +
Sbjct: 262 SKGKQPVVANGNGQSSVASSSEKAT-------RAQGKLVFGANGNRAPKEAAPKVGAAKE 321

Query: 348 ESKQEQPGKEEPKFQAFSGKRYSLRG 370
             K+EQ  K+EPKFQAFSGK+YSLRG
Sbjct: 322 TKKEEQEKKDEPKFQAFSGKKYSLRG 340

[Close]

BLAST of CmaCh19G006790 vs. TAIR10
Match: AT4G38930.2 (AT4G38930.2 Ubiquitin fusion degradation UFD1 family protein)

HSP 1 Score: 422.5 bits (1085), Expect = 2.6e-118
Identity = 215/328 (65.55%), Postives = 257/328 (78.35%), Query Frame = 1


Query: 48  MYFDGYGYRGTSFEQRYQCFSASFIDKPHVETGDRIIMPPSALDRLASLQIDYPMLFEFR 107
           M++DGY Y GT+FEQ Y+C+ +SFIDKP +E+GD+IIMPPSALDRLASLQIDYPMLFE R
Sbjct: 1   MFYDGYAYHGTTFEQTYRCYPSSFIDKPQIESGDKIIMPPSALDRLASLQIDYPMLFELR 60

Query: 108 NDAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLQEGDLVHVKNVTLPKGTYVKLQPHTK 167
           N + +  SHCGVLEF+AEEG+IY+PYWMM+N+LLQEGD+V V+NVTLPKGTYVKLQPHT 
Sbjct: 61  NASTDSFSHCGVLEFIAEEGVIYIPYWMMQNLLLQEGDMVRVRNVTLPKGTYVKLQPHTT 120

Query: 168 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETRPSNAISIIETDCEVD 227
           DFLDI+NPKAILET LRN+SCLT GDSIMV YNNKKY+IDIVE +PSN ISIIETDCEVD
Sbjct: 121 DFLDIANPKAILETALRNYSCLTVGDSIMVPYNNKKYFIDIVEAKPSNGISIIETDCEVD 180

Query: 228 FAPPLDYKEPEKPV--APTKGKEQVAEAIEPEAEPKFVAFTGTGRRLDGKSSNYQPQPIS 287
           FAPPLDYKEPE+PV  AP KG+ +  E    EAEPKF  FTG+GRRLDG+  +Y+PQP  
Sbjct: 181 FAPPLDYKEPERPVAPAPAKGEAKAKEVDVAEAEPKFNPFTGSGRRLDGRPLSYEPQP-- 240

Query: 288 SAARPSDVKQSGGSSSSRYGH---SQQSAGSVNGTRRSHGKLVFGQNAHRNPNENPK-EA 347
                      G ++S+   H   S  S+GS   T+++ GKLVFG N  R+  E  K  A
Sbjct: 241 -----------GAANSNGQSHPVASSSSSGSEKATQQNRGKLVFGSNVERSTKETTKVGA 300

Query: 348 SKESKQEQPGKEEPKFQAFSGKRYSLRG 370
            K+ KQE+  ++E KFQAFSGK+YSLRG
Sbjct: 301 GKDRKQEEEAEKEAKFQAFSGKKYSLRG 315

[Close]

BLAST of CmaCh19G006790 vs. TAIR10
Match: AT2G29070.2 (AT2G29070.2 Ubiquitin fusion degradation UFD1 family protein)

HSP 1 Score: 346.7 bits (888), Expect = 1.8e-95
Identity = 186/319 (58.31%), Postives = 233/319 (73.04%), Query Frame = 1


Query: 57  GTSFEQRYQCFSASFIDKPHVETGDRIIMPPSALDRLASLQIDYPMLFEFRNDAVERVSH 116
           G+SFEQ Y+C+  +FIDK H+E GD+IIMPPSALDRLASL I+YPMLF+  N +VE+ SH
Sbjct: 5   GSSFEQCYRCYPVTFIDKAHLEKGDKIIMPPSALDRLASLHIEYPMLFQLSNVSVEKTSH 64

Query: 117 CGVLEFVAEEGMIYMPYWMMENMLLQEGDLVHVKNVTLPKGTYVKLQPHTKDFLDISNPK 176
           CGVLEF A+EG++Y+PYWMM+NM L+EGD++ VKN++L KGTY+KLQPHT+DFLDISNPK
Sbjct: 65  CGVLEFTADEGLVYLPYWMMQNMSLEEGDVMQVKNISLVKGTYIKLQPHTQDFLDISNPK 124

Query: 177 AILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETRPSNAISIIETDCEVDFAPPLDYKE 236
           AILETTLR++SCLTTGD+IMV YNNK+YYI++VE +PS+A+SIIETDCEVDFAPPLDYKE
Sbjct: 125 AILETTLRSYSCLTTGDTIMVPYNNKQYYINVVEAKPSSAVSIIETDCEVDFAPPLDYKE 184

Query: 237 PEKPVAPTKGKE---QVAEAIEPEAE-PKFVAFTGTGRRLDGKSSNYQPQPISSAARPSD 296
           PEKP   T   +   QV E  EP ++ PKF  FTG+G+RLDGK+         +   P D
Sbjct: 185 PEKPQKLTPSNKRPLQVKEEEEPASKVPKFTPFTGSGKRLDGKA--------QTQTEPED 244

Query: 297 VKQSGGSSSSRYGHSQQSAGSVNGTRRSHGKLVFGQNAHRNPNENPK-EASKESKQEQPG 356
            KQ      +  G   +   SV   R+  GKLVFG N+     E  K +  K   QE   
Sbjct: 245 TKQQ--EKPTENGKDDEKL-SVTTPRQISGKLVFGSNSKSAAKETAKVDDPKNIVQESST 304

Query: 357 K-EEPKFQAFSGKRYSLRG 370
           K +E KF+ F+GK+YSL G
Sbjct: 305 KSDEAKFKVFTGKKYSLNG 312

[Close]

BLAST of CmaCh19G006790 vs. TAIR10
Match: AT4G15420.1 (AT4G15420.1 Ubiquitin fusion degradation UFD1 family protein)

HSP 1 Score: 109.0 bits (271), Expect = 6.3e-24
Identity = 66/184 (35.87%), Postives = 97/184 (52.72%), Query Frame = 1


Query: 57  GTSFEQRYQCFSASFIDKPHVETGDRIIMPPSALDRLASLQI--DYPMLFEFR---NDAV 116
           G  FE+ +Q  S           GD+I +PPS    L+        P+ FE     +   
Sbjct: 75  GIVFERVFQAVSFQ-------GNGDKIKLPPSCFTELSDQGAFDKGPLYFELSVVDHADN 134

Query: 117 ERVSHCGVLEFVAEEGMIYMPYWMMENMLL----QEGDLVHVKNVTLPKGTYVKLQPHTK 176
           ++ +H GVLEF AE+G I +P  +  N+       +  LV ++ + LPKG+Y KLQP   
Sbjct: 135 KKTTHSGVLEFTAEDGTIGLPPHVWSNLFSTHDPMDVPLVEIRYIRLPKGSYAKLQPDNL 194

Query: 177 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETRPSNAISIIETDCEVD 232
            F D+ N KAILET LR  + L+  D ++V Y    Y + ++E RP+ +IS++ETD EVD
Sbjct: 195 GFSDLPNHKAILETILRQHATLSLDDVLLVNYGQVSYKLQVLELRPATSISVLETDIEVD 251

[Close]

BLAST of CmaCh19G006790 vs. NCBI nr
Match: gi|700187947|gb|KGN43180.1| (hypothetical protein Csa_7G006300 [Cucumis sativus])

HSP 1 Score: 589.3 bits (1518), Expect = 4.5e-165
Identity = 305/356 (85.67%), Postives = 323/356 (90.73%), Query Frame = 1


Query: 17  DSFSSSKFFTARLRAFTRLIIRRGTLHRLYKMYFDGYGYRGTSFEQRYQCFSASFIDKPH 76
           + F +  FFT R  AF RLI RRGTL+RLYKMYFDGYGYRGTSFEQ YQCFS SFIDKPH
Sbjct: 97  NQFYALGFFTTRFGAFRRLINRRGTLYRLYKMYFDGYGYRGTSFEQSYQCFSTSFIDKPH 156

Query: 77  VETGDRIIMPPSALDRLASLQIDYPMLFEFRNDAVERVSHCGVLEFVAEEGMIYMPYWMM 136
           +ETGDRIIMPPSALDRLASLQIDYPMLFE RNDAVERVSHCGVLEFVAEEGMIYMPYWMM
Sbjct: 157 LETGDRIIMPPSALDRLASLQIDYPMLFELRNDAVERVSHCGVLEFVAEEGMIYMPYWMM 216

Query: 137 ENMLLQEGDLVHVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTGDSIM 196
           ENM+LQEGDLV VKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTGDSIM
Sbjct: 217 ENMVLQEGDLVRVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTGDSIM 276

Query: 197 VAYNNKKYYIDIVETRPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAIEP 256
           VAYNNKKYYIDIVET+PSNAISIIETDCEVDFAPPLDYKEPEK VAPTKGKEQVAEA + 
Sbjct: 277 VAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKLVAPTKGKEQVAEAPDS 336

Query: 257 EAEPKFVAFTGTGRRLDGKSSNYQPQPISSAARPSDVKQSGGSSSSRYGHSQQSAG---S 316
           EAEPKF AFTGTGRRLDGKSSN+QPQPISS +R +D KQSGG  SSRYGH+QQSAG   S
Sbjct: 337 EAEPKFSAFTGTGRRLDGKSSNHQPQPISS-SRSADAKQSGG--SSRYGHAQQSAGSSSS 396

Query: 317 VNGTRRSHGKLVFGQNAHRNPNENPKEASKESKQEQPGKEEPKFQAFSGKRYSLRG 370
           VNG R+S GKLVFGQNA+RNP E PKEASKESK+++  K+ PKFQ F+GKRYSLRG
Sbjct: 397 VNGIRQSQGKLVFGQNANRNPKETPKEASKESKKDEAEKDNPKFQPFAGKRYSLRG 449

[Close]

BLAST of CmaCh19G006790 vs. NCBI nr
Match: gi|659068517|ref|XP_008444838.1| (PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 557.8 bits (1436), Expect = 1.5e-155
Identity = 286/324 (88.27%), Postives = 299/324 (92.28%), Query Frame = 1


Query: 48  MYFDGYGYRGTSFEQRYQCFSASFIDKPHVETGDRIIMPPSALDRLASLQIDYPMLFEFR 107
           MYFDGYGYRGTSFEQ YQCFS SFIDKPH+ETGDRIIMPPSALDRLASLQIDYPMLFE R
Sbjct: 1   MYFDGYGYRGTSFEQSYQCFSTSFIDKPHLETGDRIIMPPSALDRLASLQIDYPMLFELR 60

Query: 108 NDAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLQEGDLVHVKNVTLPKGTYVKLQPHTK 167
           NDAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLQEGDLV VKNV LPKGTYVKLQPHTK
Sbjct: 61  NDAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLQEGDLVRVKNVPLPKGTYVKLQPHTK 120

Query: 168 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETRPSNAISIIETDCEVD 227
           DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVET+PSNAISIIETDCEVD
Sbjct: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVD 180

Query: 228 FAPPLDYKEPEKPVAPTKGKEQVAEAIEPEAEPKFVAFTGTGRRLDGKSSNYQPQPISSA 287
           FAPPLDYKEPEKPVAPTKGKEQVAEA + EAEPKF AFTGTGRRLDGKSSN+QPQPISS 
Sbjct: 181 FAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSNHQPQPISS- 240

Query: 288 ARPSDVKQSGGSSSSRYGHSQQSAG--SVNGTRRSHGKLVFGQNAHRNPNENPKEASKES 347
           +R  D KQSGG   SRYGHSQQSAG  SVNG  +S GKLVFGQNA+RNP E PKEAS+E+
Sbjct: 241 SRSGDAKQSGG--RSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKEASREN 300

Query: 348 KQEQPGKEEPKFQAFSGKRYSLRG 370
           K++Q  KE+PKFQ F+GKRYSLRG
Sbjct: 301 KKDQAEKEDPKFQPFTGKRYSLRG 321

[Close]

BLAST of CmaCh19G006790 vs. NCBI nr
Match: gi|449461623|ref|XP_004148541.1| (PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X1 [Cucumis sativus])

HSP 1 Score: 556.6 bits (1433), Expect = 3.3e-155
Identity = 286/325 (88.00%), Postives = 301/325 (92.62%), Query Frame = 1


Query: 48  MYFDGYGYRGTSFEQRYQCFSASFIDKPHVETGDRIIMPPSALDRLASLQIDYPMLFEFR 107
           MYFDGYGYRGTSFEQ YQCFS SFIDKPH+ETGDRIIMPPSALDRLASLQIDYPMLFE R
Sbjct: 1   MYFDGYGYRGTSFEQSYQCFSTSFIDKPHLETGDRIIMPPSALDRLASLQIDYPMLFELR 60

Query: 108 NDAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLQEGDLVHVKNVTLPKGTYVKLQPHTK 167
           NDAVERVSHCGVLEFVAEEGMIYMPYWMMENM+LQEGDLV VKNVTLPKGTYVKLQPHTK
Sbjct: 61  NDAVERVSHCGVLEFVAEEGMIYMPYWMMENMVLQEGDLVRVKNVTLPKGTYVKLQPHTK 120

Query: 168 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETRPSNAISIIETDCEVD 227
           DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVET+PSNAISIIETDCEVD
Sbjct: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVD 180

Query: 228 FAPPLDYKEPEKPVAPTKGKEQVAEAIEPEAEPKFVAFTGTGRRLDGKSSNYQPQPISSA 287
           FAPPLDYKEPEK VAPTKGKEQVAEA + EAEPKF AFTGTGRRLDGKSSN+QPQPISS 
Sbjct: 181 FAPPLDYKEPEKLVAPTKGKEQVAEAPDSEAEPKFSAFTGTGRRLDGKSSNHQPQPISS- 240

Query: 288 ARPSDVKQSGGSSSSRYGHSQQSAG---SVNGTRRSHGKLVFGQNAHRNPNENPKEASKE 347
           +R +D KQSGG  SSRYGH+QQSAG   SVNG R+S GKLVFGQNA+RNP E PKEASKE
Sbjct: 241 SRSADAKQSGG--SSRYGHAQQSAGSSSSVNGIRQSQGKLVFGQNANRNPKETPKEASKE 300

Query: 348 SKQEQPGKEEPKFQAFSGKRYSLRG 370
           SK+++  K+ PKFQ F+GKRYSLRG
Sbjct: 301 SKKDEAEKDNPKFQPFAGKRYSLRG 322

[Close]

BLAST of CmaCh19G006790 vs. NCBI nr
Match: gi|659094412|ref|XP_008448046.1| (PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X3 [Cucumis melo])

HSP 1 Score: 555.1 bits (1429), Expect = 9.5e-155
Identity = 285/324 (87.96%), Postives = 297/324 (91.67%), Query Frame = 1


Query: 48  MYFDGYGYRGTSFEQRYQCFSASFIDKPHVETGDRIIMPPSALDRLASLQIDYPMLFEFR 107
           MYFDGYGYRGTSFEQ YQCFS SFIDKPH+ETGDRIIMPPSALDRLASLQIDYPMLFE R
Sbjct: 1   MYFDGYGYRGTSFEQSYQCFSTSFIDKPHLETGDRIIMPPSALDRLASLQIDYPMLFELR 60

Query: 108 NDAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLQEGDLVHVKNVTLPKGTYVKLQPHTK 167
           NDAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLQEGDLV VKNV LPKGTYVKLQPHTK
Sbjct: 61  NDAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLQEGDLVRVKNVPLPKGTYVKLQPHTK 120

Query: 168 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETRPSNAISIIETDCEVD 227
           DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVET+PSNAISIIETDCEVD
Sbjct: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVD 180

Query: 228 FAPPLDYKEPEKPVAPTKGKEQVAEAIEPEAEPKFVAFTGTGRRLDGKSSNYQPQPISSA 287
           FAPPLDYKEPEKPVAPTKGKEQVAEA + EAEPKF AFTGTGRRLDGKSSN+QPQPISS 
Sbjct: 181 FAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSNHQPQPISS- 240

Query: 288 ARPSDVKQSGGSSSSRYGHSQQSAG--SVNGTRRSHGKLVFGQNAHRNPNENPKEASKES 347
           +R  D KQ GG   SRYGHSQQSAG  SVNG  +S GKLVFGQNA+RNP E PKE SKES
Sbjct: 241 SRSGDAKQLGG--RSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKES 300

Query: 348 KQEQPGKEEPKFQAFSGKRYSLRG 370
           K+++  KE+PKFQ F+GKRYSLRG
Sbjct: 301 KKDEAEKEDPKFQPFTGKRYSLRG 321

[Close]

BLAST of CmaCh19G006790 vs. NCBI nr
Match: gi|659068519|ref|XP_008444847.1| (PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 549.7 bits (1415), Expect = 4.0e-153
Identity = 284/324 (87.65%), Postives = 297/324 (91.67%), Query Frame = 1


Query: 48  MYFDGYGYRGTSFEQRYQCFSASFIDKPHVETGDRIIMPPSALDRLASLQIDYPMLFEFR 107
           MYFDGYGYRGTSFEQ YQCFS SFIDKPH+ETGDRIIMPPSALDRLASLQIDYPMLFE R
Sbjct: 1   MYFDGYGYRGTSFEQSYQCFSTSFIDKPHLETGDRIIMPPSALDRLASLQIDYPMLFELR 60

Query: 108 NDAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLQEGDLVHVKNVTLPKGTYVKLQPHTK 167
           NDAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLQEGDLV VKNV LPKGTYVKLQPHTK
Sbjct: 61  NDAVERVSHCGVLEFVAEEGMIYMPYWMMENMLLQEGDLVRVKNVPLPKGTYVKLQPHTK 120

Query: 168 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETRPSNAISIIETDCEVD 227
           DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVET+PSNAISIIETDCEVD
Sbjct: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVD 180

Query: 228 FAPPLDYKEPEKPVAPTKGKEQVAEAIEPEAEPKFVAFTGTGRRLDGKSSNYQPQPISSA 287
           FAPPLDYKEPEKPVAPTKGKEQ  EA + EAEPKF AFTGTGRRLDGKSSN+QPQPISS+
Sbjct: 181 FAPPLDYKEPEKPVAPTKGKEQ--EAPDAEAEPKFSAFTGTGRRLDGKSSNHQPQPISSS 240

Query: 288 ARPSDVKQSGGSSSSRYGHSQQSAGS--VNGTRRSHGKLVFGQNAHRNPNENPKEASKES 347
            R  D KQSGG S  RYGHSQQSAGS  VNG  +S GKLVFGQNA+RNP E PKEAS+E+
Sbjct: 241 -RSGDAKQSGGRS--RYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKEASREN 300

Query: 348 KQEQPGKEEPKFQAFSGKRYSLRG 370
           K++Q  KE+PKFQ F+GKRYSLRG
Sbjct: 301 KKDQAEKEDPKFQPFTGKRYSLRG 319

The following BLAST results are available for this feature:

BLAST of CmaCh19G006790 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UFD1_RAT	2.0e-64	44.73	Ubiquitin fusion degradation protein 1 homolog OS=Rattus norvegicus GN=Ufd1l PE=...	[more]
UFD1_MOUSE	2.6e-64	44.73	Ubiquitin fusion degradation protein 1 homolog OS=Mus musculus GN=Ufd1l PE=1 SV=...	[more]
UFD1_HUMAN	1.3e-63	44.41	Ubiquitin fusion degradation protein 1 homolog OS=Homo sapiens GN=UFD1L PE=1 SV=...	[more]
UFD1_DICDI	2.0e-59	42.18	Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum GN=uf...	[more]
UFD1_DROME	6.3e-58	47.30	Ubiquitin fusion degradation protein 1 homolog OS=Drosophila melanogaster GN=Ufd...	[more]

BLAST of CmaCh19G006790 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K0F7_CUCSA	3.2e-165	85.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G006300 PE=4 SV=1	[more]
U5GJ40_POPTR	4.8e-129	75.30	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s17010g PE=4 SV=1	[more]
U5GFU1_POPTR	1.8e-128	75.23	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s17010g PE=4 SV=1	[more]
C6TB96_SOYBN	1.9e-125	75.08	Putative uncharacterized protein OS=Glycine max PE=2 SV=1	[more]
I1KQB3_SOYBN	2.4e-125	75.08	Uncharacterized protein OS=Glycine max GN=GLYMA_08G045500 PE=4 SV=1	[more]

BLAST of CmaCh19G006790 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21270.3	2.1e-120	68.10	ubiquitin fusion degradation 1	[more]
AT4G38930.2	2.6e-118	65.55	Ubiquitin fusion degradation UFD1 family protein	[more]
AT2G29070.2	1.8e-95	58.31	Ubiquitin fusion degradation UFD1 family protein	[more]
AT4G15420.1	6.3e-24	35.87	Ubiquitin fusion degradation UFD1 family protein	[more]

BLAST of CmaCh19G006790 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700187947\|gb\|KGN43180.1\|	4.5e-165	85.67	hypothetical protein Csa_7G006300 [Cucumis sativus]	[more]
gi\|659068517\|ref\|XP_008444838.1\|	1.5e-155	88.27	PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X1 [Cucumis me...	[more]
gi\|449461623\|ref\|XP_004148541.1\|	3.3e-155	88.00	PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X1 [Cucumis sa...	[more]
gi\|659094412\|ref\|XP_008448046.1\|	9.5e-155	87.96	PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X3 [Cucumis me...	[more]
gi\|659068519\|ref\|XP_008444847.1\|	4.0e-153	87.65	PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X2 [Cucumis me...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004854	Ufd1-like

Vocabulary: **Biological Process**
Term	Definition
GO:0006511	ubiquitin-dependent protein catabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G006790.1	CmaCh19G006790.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004854	Ubiquitin fusion degradation protein UFD1	PANTHER	PTHR12555	UBIQUITIN FUSION DEGRADATON PROTEIN 1	coord: 13..368 score: 7.5E
IPR004854	Ubiquitin fusion degradation protein UFD1	PFAM	PF03152	UFD1	coord: 60..231 score: 4.2
None	No IPR available	PANTHER	PTHR12555:SF16	SUBFAMILY NOT NAMED	coord: 13..368 score: 7.5E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh19G006790	Cucumber (Gy14) v2	cgybcmaB944
CmaCh19G006790	Silver-seed gourd	carcmaB0238
CmaCh19G006790	Silver-seed gourd	carcmaB0440
CmaCh19G006790	Wax gourd	cmawgoB0647
CmaCh19G006790	Cucumber (Chinese Long) v3	cmacucB0638
CmaCh19G006790	Watermelon (97103) v2	cmawmbB531
CmaCh19G006790	Wax gourd	cmawgoB0641
CmaCh19G006790	Cucurbita maxima (Rimu)	cmacmaB152
CmaCh19G006790	Cucurbita maxima (Rimu)	cmacmaB452
CmaCh19G006790	Cucumber (Gy14) v1	cgycmaB1038
CmaCh19G006790	Cucurbita moschata (Rifu)	cmacmoB495
CmaCh19G006790	Cucurbita moschata (Rifu)	cmacmoB508
CmaCh19G006790	Melon (DHL92) v3.5.1	cmameB462
CmaCh19G006790	Watermelon (Charleston Gray)	cmawcgB460
CmaCh19G006790	Watermelon (97103) v1	cmawmB503
CmaCh19G006790	Cucurbita pepo (Zucchini)	cmacpeB522
CmaCh19G006790	Cucurbita pepo (Zucchini)	cmacpeB526
CmaCh19G006790	Cucurbita pepo (Zucchini)	cmacpeB540
CmaCh19G006790	Bottle gourd (USVL1VR-Ls)	cmalsiB472