CmaCh19G006760 (gene) Cucurbita maxima (Rimu)

NameCmaCh19G006760
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr19 : 7046624 .. 7047443 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCGGTTGGAAGAGAAATCTCAACTTTGTTGACGCTCCATCCTCGGATTCTCATTTGGTTCCACCGGCCACTGATTCATCTCAAATTTATCCTCTCCGTGAGACTGGCACTGACAGCGACGGCTCCACCGTGAGTTCCCGGAATCTGCGGCCTCTCTGGTCACCCGCATTCTCCTTCTTCTTCACGATTTATGGCCGCTGGCCGGTGCTGAGTCGCCGTTGTTGTGTTACTGTTTCATCTAGGTCCATTCCTCGGTATTCATTTCCACATTTCTACGTTCGGTACGTTTACTTTCTATCTCTCTTTGATTGTCACTTTGATGCTTTCTTCCACTCGTAAAGCTTCCTCGTCTTCTTCTACTTACTCTGAAGCTACGCCTTGAGTCCTTCTCGGATTTGGATTAGAGTTCTTGCTATCATGTTTGCGTATTTATCATCTCGGTGATCTTTCCTCTCGGACGTATCTAGCGGAGTATTGTTTCATTTTCGATGCTTTAATTGTTCAGCAGCTCCTTGTAATTTGTTACATGTGGAAAATGCTGCATTCGAAGTTTTCTTTGAGTCGAAGTAAATCAATGAGTTCCATAGCGACATAGAAGTTTAACAATCTTGCTTAACTGACGTTTTGATTAAGATAAGCTAACCGTTAGAATTGAATATTTCTGCCATTGCGTAAAACGTCTATCCGCGCCATATTCCGCGTGCATTTCGGTATGCACATTGTGATTATTATATATTTCGGGGGAGTTTTCAGTTTTGGAACGTGGTTGTTTTCTTATAGTGCACGAGGCTTTAAGACGACGAAAATCGCAGCAGAGTAG

mRNA sequence

TGCGGTTGGAAGAGAAATCTCAACTTTGTTGACGCTCCATCCTCGGATTCTCATTTGGTTCCACCGGCCACTGATTCATCTCAAATTTATCCTCTCCGTGAGACTGGCACTGACAGCGACGGCTCCACCGTGAGTTCCCGGAATCTGCGGCCTCTCTGGTCACCCGCATTCTCCTTCTTCTTCACGATTTATGGCCGCTGGCCGGTGCTGAGTCGCCGTTGTTGTGTTACTGTTTCATCTAGGTCCATTCCTCGGTATTCATTTCCACATTTCTACGTTCGTGCACGAGGCTTTAAGACGACGAAAATCGCAGCAGAGTAG

Coding sequence (CDS)

TGCGGTTGGAAGAGAAATCTCAACTTTGTTGACGCTCCATCCTCGGATTCTCATTTGGTTCCACCGGCCACTGATTCATCTCAAATTTATCCTCTCCGTGAGACTGGCACTGACAGCGACGGCTCCACCGTGAGTTCCCGGAATCTGCGGCCTCTCTGGTCACCCGCATTCTCCTTCTTCTTCACGATTTATGGCCGCTGGCCGGTGCTGAGTCGCCGTTGTTGTGTTACTGTTTCATCTAGGTCCATTCCTCGGTATTCATTTCCACATTTCTACGTTCGTGCACGAGGCTTTAAGACGACGAAAATCGCAGCAGAGTAG

Protein sequence

CGWKRNLNFVDAPSSDSHLVPPATDSSQIYPLRETGTDSDGSTVSSRNLRPLWSPAFSFFFTIYGRWPVLSRRCCVTVSSRSIPRYSFPHFYVRARGFKTTKIAAE
BLAST of CmaCh19G006760 vs. TrEMBL
Match: A0A0A0K5R0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G006260 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.2e-09
Identity = 33/49 (67.35%), Postives = 36/49 (73.47%), Query Frame = 1

Query: 1  CGWKRNLNFVDAPSSDSHLVPPATDSSQIYPLRETGTDSDGSTVSSRNL 50
          CGW+RN NFVDAPSS SH +PPA  SSQI  L +  T SDGS VS RNL
Sbjct: 11 CGWRRNFNFVDAPSSGSHFLPPAIASSQISLLPKNNTHSDGSAVSYRNL 59

BLAST of CmaCh19G006760 vs. NCBI nr
Match: gi|700187943|gb|KGN43176.1| (hypothetical protein Csa_7G006260 [Cucumis sativus])

HSP 1 Score: 69.3 bits (168), Expect = 4.5e-09
Identity = 33/49 (67.35%), Postives = 36/49 (73.47%), Query Frame = 1

Query: 1  CGWKRNLNFVDAPSSDSHLVPPATDSSQIYPLRETGTDSDGSTVSSRNL 50
          CGW+RN NFVDAPSS SH +PPA  SSQI  L +  T SDGS VS RNL
Sbjct: 11 CGWRRNFNFVDAPSSGSHFLPPAIASSQISLLPKNNTHSDGSAVSYRNL 59

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K5R0_CUCSA3.2e-0967.35Uncharacterized protein OS=Cucumis sativus GN=Csa_7G006260 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|700187943|gb|KGN43176.1|4.5e-0967.35hypothetical protein Csa_7G006260 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh19G006760.1CmaCh19G006760.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None