CmaCh19G006540 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh19G006540
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionHydroxyproline-rich glycoprotein family protein
LocationCma_Chr19 : 6893087 .. 6893788 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACCTTCAACTCTCTCTTGCCCTCCCGTCCGCCGCCACCGCCGCCACTACCGCCGCCGCCGCCGCCACCGCCACCACCACCGCCGCCGCCACGGTGGCTGCCGCCGCTGCAGCCTACGAGCTACACTTACTATCCTCATTGAGAACCCCCAACATTTTAGGAGTCCGTCAAACATCTCTCCGCCGTAGGAAGTGTAATTCTCCAACGACGGGGCCGATCGAGCCACCATATCCATGGTCGACGGACCGAATAGCGGTGGTTCATACGCTACACTATTTGACATTGAACCAAATCCTGACGATCACCGGGGATGTCAAGTGCCAGCAATGTCGGAGAATTTACGAGATCGAATACAACGTTGTTTCGAAGTTTAACGAGATTGGGAGCTTCGTAGAGCACAACATGGAGTCGTTCCGGGACCGGGCGCCAAAGAAGTGGATGCAGCCGAACTATCCGACGTGTCGGTTTTGCGGGGCGGAAAAAGGAGTGAAGCCGGTGATTCCAAAGGAATGGGAGAAGATCAATTGGGTGTTCTTGCTTTTGGGGGAAATGGTTGGAGCTTTGAAACTGAATCATTTGAAGTACTTTTGCAGTTACACGAAGAATCATCGAACAGGTTCAAAGGATCGTCTTGTTTATCTCACTTACATCACTTTGTGCCGCCAAATTGATCCTTCTGGCCGTTTCAGTCGAATTTGA

mRNA sequence

ATGGACCTTCAACTCTCTCTTGCCCTCCCGTCCGCCGCCACCGCCGCCACTACCGCCGCCGCCGCCGCCACCGCCACCACCACCGCCGCCGCCACGGTGGCTGCCGCCGCTGCAGCCTACGAGCTACACTTACTATCCTCATTGAGAACCCCCAACATTTTAGGAGTCCGTCAAACATCTCTCCGCCGTAGGAAGTGTAATTCTCCAACGACGGGGCCGATCGAGCCACCATATCCATGGTCGACGGACCGAATAGCGGTGGTTCATACGCTACACTATTTGACATTGAACCAAATCCTGACGATCACCGGGGATGTCAAGTGCCAGCAATGTCGGAGAATTTACGAGATCGAATACAACGTTGTTTCGAAGTTTAACGAGATTGGGAGCTTCGTAGAGCACAACATGGAGTCGTTCCGGGACCGGGCGCCAAAGAAGTGGATGCAGCCGAACTATCCGACGTGTCGGTTTTGCGGGGCGGAAAAAGGAGTGAAGCCGGTGATTCCAAAGGAATGGGAGAAGATCAATTGGGTGTTCTTGCTTTTGGGGGAAATGGTTGGAGCTTTGAAACTGAATCATTTGAAGTACTTTTGCAGTTACACGAAGAATCATCGAACAGGTTCAAAGGATCGTCTTGTTTATCTCACTTACATCACTTTGTGCCGCCAAATTGATCCTTCTGGCCGTTTCAGTCGAATTTGA

Coding sequence (CDS)

ATGGACCTTCAACTCTCTCTTGCCCTCCCGTCCGCCGCCACCGCCGCCACTACCGCCGCCGCCGCCGCCACCGCCACCACCACCGCCGCCGCCACGGTGGCTGCCGCCGCTGCAGCCTACGAGCTACACTTACTATCCTCATTGAGAACCCCCAACATTTTAGGAGTCCGTCAAACATCTCTCCGCCGTAGGAAGTGTAATTCTCCAACGACGGGGCCGATCGAGCCACCATATCCATGGTCGACGGACCGAATAGCGGTGGTTCATACGCTACACTATTTGACATTGAACCAAATCCTGACGATCACCGGGGATGTCAAGTGCCAGCAATGTCGGAGAATTTACGAGATCGAATACAACGTTGTTTCGAAGTTTAACGAGATTGGGAGCTTCGTAGAGCACAACATGGAGTCGTTCCGGGACCGGGCGCCAAAGAAGTGGATGCAGCCGAACTATCCGACGTGTCGGTTTTGCGGGGCGGAAAAAGGAGTGAAGCCGGTGATTCCAAAGGAATGGGAGAAGATCAATTGGGTGTTCTTGCTTTTGGGGGAAATGGTTGGAGCTTTGAAACTGAATCATTTGAAGTACTTTTGCAGTTACACGAAGAATCATCGAACAGGTTCAAAGGATCGTCTTGTTTATCTCACTTACATCACTTTGTGCCGCCAAATTGATCCTTCTGGCCGTTTCAGTCGAATTTGA

Protein sequence

MDLQLSLALPSAATAATTAAAAATATTTAAATVAAAAAAYELHLLSSLRTPNILGVRQTSLRRRKCNSPTTGPIEPPYPWSTDRIAVVHTLHYLTLNQILTITGDVKCQQCRRIYEIEYNVVSKFNEIGSFVEHNMESFRDRAPKKWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVFLLLGEMVGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFSRI
Homology
[Close]
BLAST of CmaCh19G006540 vs. TrEMBL
Match: A0A0A0K3Q8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G259350 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 3.6e-66
Identity = 136/234 (58.12%), Postives = 165/234 (70.51%), Query Frame = 1 

Query: 1   MDLQLSLALPSAATAATTAAAAATATTTAAATVAAAAAAYELHLLSSLRTPNILGVRQTS 60
           +DL+LSL  PS   ++  +AA        A T              ++R    LG R++S
Sbjct: 16  LDLRLSLRPPSGHLSSQPSAAPIGHARPNAVT--------------NMRVTRSLGTRRSS 75

Query: 61  LRRRKCNSP-TTGPIEPPYPWSTDRIAVVHTLHYLTLNQILTITGDVKCQQCRRIYEIEY 120
            +R    SP TT  IEPPYPWST+R A+V TL+ L  NQIL ITGDV+C+QC+  Y IEY
Sbjct: 76  HQRCNSRSPRTTETIEPPYPWSTNRRAMVRTLNDLKSNQILQITGDVQCRQCQVEYTIEY 135

Query: 121 NVVSKFNEIGSFVEHNMESFRDRAPKKWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVF 180
           ++ SKF EI SFVE N  SFRDRAP+ WM PNYPTCRFCG E G +PVIPK+W KINW+F
Sbjct: 136 DMDSKFEEIASFVEENKNSFRDRAPQSWMNPNYPTCRFCGHENGARPVIPKQWRKINWLF 195

Query: 181 LLLGEMVGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFSRI 234
           LLLGEM+G L LNHLKYFCS T NHRTG+K+RL+YLTYITLC Q+DPSGRF+R+
Sbjct: 196 LLLGEMLGVLNLNHLKYFCSNTYNHRTGAKNRLLYLTYITLCHQVDPSGRFNRV 235

[Close]
BLAST of CmaCh19G006540 vs. TrEMBL
Match: A0A0D2V876_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G146000 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 8.9e-49
Identity = 91/179 (50.84%), Postives = 120/179 (67.04%), Query Frame = 1 

Query: 57  RQTSLRRRKCNSPTTGPIE---PPYPWSTDRIAVVHTLHYLTLNQILTITGDVKCQQCRR 116
           R   +RR   N+   G  E   PPYPW+T   A VHTL+YL    I TITGDV+C++C R
Sbjct: 141 RPIRVRRNSTNALREGQSETVPPPYPWATSHRATVHTLNYLLSIPIPTITGDVQCKRCER 200

Query: 117 IYEIEYNVVSKFNEIGSFVEHNMESFRDRAPKKWMQPNYPTCRFCGAEKGVKPVIPKEWE 176
            YE+ Y++ +KF EI +++  N ES  DRAP  W  P  P C+FC  E   KPVI  + +
Sbjct: 201 QYEMGYDLKTKFTEIATYIAQNKESMHDRAPSVWRNPVLPKCKFCDQENSAKPVISDKKK 260

Query: 177 KINWVFLLLGEMVGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFSR 233
            INW+FLLLG+++G   L  LKYFC +TKNHRTG+KDR++YLTY+ LC+Q+DP+G F R
Sbjct: 261 SINWLFLLLGQVLGCCTLEQLKYFCKHTKNHRTGAKDRVLYLTYLGLCKQLDPNGPFDR 319

[Close]
BLAST of CmaCh19G006540 vs. TrEMBL
Match: A0A059AMX4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01256 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.0e-48
Identity = 82/154 (53.25%), Postives = 117/154 (75.97%), Query Frame = 1 

Query: 77  PYPWSTDRIAVVHTLHYLTLNQILTITGDVKCQQCRRIYEIEYNVVSKFNEIGSFVEHNM 136
           P+PW+T+R A VH+++YL  N+I TITG+V+C++C +++EIEY++  KF E+G+F+  N 
Sbjct: 15  PFPWATNRRATVHSMNYLLSNRIFTITGEVQCKKCEKVFEIEYDLRGKFLEVGNFIAQNK 74

Query: 137 ESFRDRAPKKWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVFLLLGEMVGALKLNHLKY 196
            +  DRAP +WM P  P CRFC  E   KPVI  + +KINW+FLLLG+ +G L L  LKY
Sbjct: 75  ATMHDRAPHEWMSPVLPKCRFCNQENSAKPVISAKKKKINWLFLLLGQTLGCLTLKQLKY 134

Query: 197 FCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRF 231
           FC++TK HRTG+KDR++Y TY+ LC+Q+DP+G F
Sbjct: 135 FCAHTKIHRTGAKDRILYYTYLGLCKQLDPTGPF 168

[Close]
BLAST of CmaCh19G006540 vs. TrEMBL
Match: A0A067DT89_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041599mg PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.4e-48
Identity = 87/174 (50.00%), Postives = 119/174 (68.39%), Query Frame = 1 

Query: 62  RRRKCNSPTTGP---IEPPYPWSTDRIAVVHTLHYLTLNQILTITGDVKCQQCRRIYEIE 121
           RR    +P  G    +   YPW+T   A VH L+YL   QI TITG+++C++C + YE+ 
Sbjct: 62  RRNPTQAPGQGKGDTVPALYPWATTHRATVHNLNYLLSKQITTITGEMQCKKCEKQYEMG 121

Query: 122 YNVVSKFNEIGSFVEHNMESFRDRAPKKWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWV 181
           Y++  KF E+G F+  N  S  DRAP  WM P  PTC+FC  E   KPVIP + ++INW+
Sbjct: 122 YDLRDKFYEVGRFIAENKSSMHDRAPSVWMNPVLPTCKFCDQENSAKPVIPDKKKQINWL 181

Query: 182 FLLLGEMVGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFSR 233
           FLLLG+++G   L+ LKYFC +TKNHRTG+KDR++YLTY+ LC+Q+DP+G F R
Sbjct: 182 FLLLGQLLGCCTLDQLKYFCKHTKNHRTGAKDRVLYLTYLGLCKQLDPNGPFGR 235

[Close]
BLAST of CmaCh19G006540 vs. TrEMBL
Match: V4RPW4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030108mg PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.4e-48
Identity = 87/174 (50.00%), Postives = 119/174 (68.39%), Query Frame = 1 

Query: 62  RRRKCNSPTTGP---IEPPYPWSTDRIAVVHTLHYLTLNQILTITGDVKCQQCRRIYEIE 121
           RR    +P  G    +   YPW+T   A VH L+YL   QI TITG+++C++C + YE+ 
Sbjct: 152 RRNPTQAPGQGKGDTVPALYPWATTHRATVHNLNYLLSKQITTITGEMQCKKCEKQYEMG 211

Query: 122 YNVVSKFNEIGSFVEHNMESFRDRAPKKWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWV 181
           Y++  KF E+G F+  N  S  DRAP  WM P  PTC+FC  E   KPVIP + ++INW+
Sbjct: 212 YDLRDKFYEVGRFIAENKSSMHDRAPSVWMNPVLPTCKFCDQENSAKPVIPDKKKQINWL 271

Query: 182 FLLLGEMVGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFSR 233
           FLLLG+++G   L+ LKYFC +TKNHRTG+KDR++YLTY+ LC+Q+DP+G F R
Sbjct: 272 FLLLGQLLGCCTLDQLKYFCKHTKNHRTGAKDRVLYLTYLGLCKQLDPNGPFGR 325

[Close]
BLAST of CmaCh19G006540 vs. TAIR10
Match: AT1G49330.1 (AT1G49330.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 174.9 bits (442), Expect = 5.9e-44
Identity = 76/165 (46.06%), Postives = 105/165 (63.64%), Query Frame = 1 

Query: 62  RRRKCNSPTTGPIEPPYPWSTDRIAVVHTLHYLTLNQILTITGDVKCQQCRRIYEIEYNV 121
           R R   S  +  I PP+PW+T+R   + +L YL  NQI TITG+V+C+ C ++Y++ YN+
Sbjct: 155 RSRSTVSKKSDTISPPFPWATNRRGEIQSLEYLESNQITTITGEVQCRHCEKVYQVSYNL 214

Query: 122 VSKFNEIGSFVEHNMESFRDRAPKKWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVFLL 181
             +F E+  F        RDRA K W  P    C  CG EK VKPVI +   +INW+FLL
Sbjct: 215 RERFAEVVKFYLTEKRKMRDRAHKDWAYPEQRRCELCGREKAVKPVIAERKSQINWLFLL 274

Query: 182 LGEMVGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDP 227
           LG+ +G   L  LK FC ++KNHRTG+KDR++YLTY+ LC+ + P
Sbjct: 275 LGQTLGFCTLEQLKNFCKHSKNHRTGAKDRVLYLTYMGLCKMLQP 319

[Close]
BLAST of CmaCh19G006540 vs. TAIR10
Match: AT2G16190.1 (AT2G16190.1 BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G49330.1))

HSP 1 Score: 164.5 bits (415), Expect = 8.0e-41
Identity = 76/177 (42.94%), Postives = 107/177 (60.45%), Query Frame = 1 

Query: 63  RRKCNSPTTG--------PIEPPYPWSTDRIAVVHTLHYLTLNQILTITGDVKCQQCRRI 122
           RR    P  G         I PPYPW+T +   + +   L+ N I  I+G V C+ C R 
Sbjct: 128 RRNSKRPVAGVERNVGDREIVPPYPWATKKPGKIQSFRDLSSNNINVISGQVHCKTCDRT 187

Query: 123 YEIEYNVVSKFNEIGSFVEHNMESFRDRAPKKWMQPNYPTCRFCGAEKGVKPVIPKEWEK 182
             +EYN+  KF+E+  +++ N E  R RAP  W  P    CR C +E  +KPV+ +  E+
Sbjct: 188 DTVEYNLEEKFSELYGYIKVNKEEMRHRAPGSWSTPKLIPCRTCKSE--MKPVMSERKEE 247

Query: 183 INWVFLLLGEMVGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFS 232
           INW+FLLLG+M+G   L+ L+YFC     HRTGSKDR+VY+TY++LC+Q+DP G F+
Sbjct: 248 INWLFLLLGQMLGCCTLDQLRYFCQLNSKHRTGSKDRVVYITYLSLCKQLDPEGPFN 302

[Close]
BLAST of CmaCh19G006540 vs. NCBI nr
Match: gi|659092939|ref|XP_008447299.1| (PREDICTED: uncharacterized protein LOC103489770 [Cucumis melo])

HSP 1 Score: 266.2 bits (679), Expect = 5.5e-68
Identity = 139/234 (59.40%), Postives = 167/234 (71.37%), Query Frame = 1 

Query: 1   MDLQLSLALPSAATAATTAAAAATATTTAAATVAAAAAAYELHLLSSLRTPNILGVRQTS 60
           +DLQLSL  PS    +  +  A          +  A A    + L++ R    LG R++S
Sbjct: 10  LDLQLSLRPPSGDLRSRPSPPA----------IGHARA----NALTNRRITRNLGTRRSS 69

Query: 61  LRRRKCNSP-TTGPIEPPYPWSTDRIAVVHTLHYLTLNQILTITGDVKCQQCRRIYEIEY 120
           LRR    SP TT  IEPPYPWST+R A+V TL+ L  +QIL ITGDV+C+QC+  Y IEY
Sbjct: 70  LRRCNSRSPRTTETIEPPYPWSTNRRAMVRTLNDLRSSQILQITGDVRCRQCQIEYTIEY 129

Query: 121 NVVSKFNEIGSFVEHNMESFRDRAPKKWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVF 180
           ++VSKF EI SFVE N   FRDRAP+ WM PNYPTCRFCG E G +PVIP EW KINW+F
Sbjct: 130 DMVSKFEEIASFVEENKNLFRDRAPRSWMNPNYPTCRFCGHENGARPVIPDEWRKINWLF 189

Query: 181 LLLGEMVGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFSRI 234
           LLLGEM+G L LNHLKYFCSYT NHRTG+K+RL+YLTYITLC Q+DPSGRF+R+
Sbjct: 190 LLLGEMLGVLNLNHLKYFCSYTNNHRTGAKNRLLYLTYITLCHQVDPSGRFNRV 229

[Close]
BLAST of CmaCh19G006540 vs. NCBI nr
Match: gi|778730280|ref|XP_011659748.1| (PREDICTED: uncharacterized protein LOC105436256 [Cucumis sativus])

HSP 1 Score: 259.6 bits (662), Expect = 5.2e-66
Identity = 136/234 (58.12%), Postives = 165/234 (70.51%), Query Frame = 1 

Query: 1   MDLQLSLALPSAATAATTAAAAATATTTAAATVAAAAAAYELHLLSSLRTPNILGVRQTS 60
           +DL+LSL  PS   ++  +AA        A T              ++R    LG R++S
Sbjct: 16  LDLRLSLRPPSGHLSSQPSAAPIGHARPNAVT--------------NMRVTRSLGTRRSS 75

Query: 61  LRRRKCNSP-TTGPIEPPYPWSTDRIAVVHTLHYLTLNQILTITGDVKCQQCRRIYEIEY 120
            +R    SP TT  IEPPYPWST+R A+V TL+ L  NQIL ITGDV+C+QC+  Y IEY
Sbjct: 76  HQRCNSRSPRTTETIEPPYPWSTNRRAMVRTLNDLKSNQILQITGDVQCRQCQVEYTIEY 135

Query: 121 NVVSKFNEIGSFVEHNMESFRDRAPKKWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVF 180
           ++ SKF EI SFVE N  SFRDRAP+ WM PNYPTCRFCG E G +PVIPK+W KINW+F
Sbjct: 136 DMDSKFEEIASFVEENKNSFRDRAPQSWMNPNYPTCRFCGHENGARPVIPKQWRKINWLF 195

Query: 181 LLLGEMVGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFSRI 234
           LLLGEM+G L LNHLKYFCS T NHRTG+K+RL+YLTYITLC Q+DPSGRF+R+
Sbjct: 196 LLLGEMLGVLNLNHLKYFCSNTYNHRTGAKNRLLYLTYITLCHQVDPSGRFNRV 235

[Close]
BLAST of CmaCh19G006540 vs. NCBI nr
Match: gi|698426533|ref|XP_009787054.1| (PREDICTED: uncharacterized protein LOC104235071 [Nicotiana sylvestris])

HSP 1 Score: 210.3 bits (534), Expect = 3.6e-51
Identity = 94/187 (50.27%), Postives = 130/187 (69.52%), Query Frame = 1 

Query: 50  TPNILGVRQTSLRRRKCNSPT----TGPIEPPYPWSTDRIAVVHTLHYLTLNQILTITGD 109
           TP + G  Q   +RR  +       +  I PP+PW+T+R A VHTL YL   Q+ TI+GD
Sbjct: 98  TPIVAGPIQPMRKRRNPSKAAKDGKSDTIPPPFPWATNRRATVHTLDYLLSKQLFTISGD 157

Query: 110 VKCQQCRRIYEIEYNVVSKFNEIGSFVEHNMESFRDRAPKKWMQPNYPTCRFCGAEKGVK 169
           V+C++C R Y++EY++  KF EIG+++  N  +  DRAP  WM P  PTC+FC  E  VK
Sbjct: 158 VQCKRCERKYQLEYDLREKFLEIGTYIAENKAAMHDRAPDIWMNPLLPTCQFCKQENSVK 217

Query: 170 PVIPKEWEKINWVFLLLGEMVGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQID 229
           P+I ++   INW+FLLLG+M+G   L+ LKYFC +TKNHRTG+KDR++YLTY+TLC+Q+D
Sbjct: 218 PIISEDKCTINWLFLLLGKMLGCCTLDDLKYFCEHTKNHRTGAKDRVLYLTYLTLCKQLD 277

Query: 230 PSGRFSR 233
           P+G F R
Sbjct: 278 PNGPFDR 284

[Close]
BLAST of CmaCh19G006540 vs. NCBI nr
Match: gi|694397976|ref|XP_009374193.1| (PREDICTED: uncharacterized protein LOC103963140 [Pyrus x bretschneideri])

HSP 1 Score: 209.5 bits (532), Expect = 6.2e-51
Identity = 94/181 (51.93%), Postives = 125/181 (69.06%), Query Frame = 1 

Query: 59  TSLRRRKCNSPTTGPIE-------PPYPWSTDRIAVVHTLHYLTLNQILTITGDVKCQQC 118
           TS   R   +PT GP E        P+PW+T R A+VH+L YL   QI+TITG+V+C++C
Sbjct: 10  TSRHLRARRNPTQGPREGMSETVPAPFPWATTRRAMVHSLEYLYSRQIVTITGEVQCKRC 69

Query: 119 RRIYEIEYNVVSKFNEIGSFVEHNMESFRDRAPKKWMQPNYPTCRFCGAEKGVKPVIPKE 178
            R Y++EYN+  KF E+GSF+  N  + RDRAP  WM P  P C+FC  E   KP+I ++
Sbjct: 70  ERQYKMEYNLKEKFLEVGSFIAGNKSTMRDRAPSVWMNPVLPACKFCEQENSAKPIIGEK 129

Query: 179 WEKINWVFLLLGEMVGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFS 233
            + INW+FLLLG+M+G   L  LKYFC +TKNHRTG+KDR++YLTY+ LC+Q+DP G F 
Sbjct: 130 KKVINWLFLLLGQMLGCCTLEQLKYFCKHTKNHRTGAKDRVLYLTYLGLCKQLDPKGPFD 189

[Close]
BLAST of CmaCh19G006540 vs. NCBI nr
Match: gi|657990337|ref|XP_008387394.1| (PREDICTED: uncharacterized protein LOC103449851 [Malus domestica])

HSP 1 Score: 208.8 bits (530), Expect = 1.1e-50
Identity = 94/181 (51.93%), Postives = 124/181 (68.51%), Query Frame = 1 

Query: 59  TSLRRRKCNSPTTGPIE-------PPYPWSTDRIAVVHTLHYLTLNQILTITGDVKCQQC 118
           TS   R   +PT GP E        P+PW+T R A+VH+L YL   QI+TITG+V+C++C
Sbjct: 132 TSRHLRARRNPTQGPREGKSETVPAPFPWATTRRAMVHSLEYLHSRQIVTITGEVQCKRC 191

Query: 119 RRIYEIEYNVVSKFNEIGSFVEHNMESFRDRAPKKWMQPNYPTCRFCGAEKGVKPVIPKE 178
            R YE++YN+  KF E+GSF+  N    RDRAP  WM P  P C+FC  E   KP+I  +
Sbjct: 192 ERQYEMDYNLKEKFLEVGSFIAGNKSMMRDRAPSVWMNPVLPACKFCKQENSAKPIIGDK 251

Query: 179 WEKINWVFLLLGEMVGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFS 233
            + INW+FLLLG+M+G   L  LKYFC +TKNHRTG+KDR++YLTY+ LC+Q+DP+G F 
Sbjct: 252 KKVINWLFLLLGQMLGCCTLEQLKYFCKHTKNHRTGAKDRVLYLTYLGLCKQLDPNGPFD 311

The following BLAST results are available for this feature:
BLAST of CmaCh19G006540 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh19G006540 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3Q8_CUCSA3.6e-6658.12Uncharacterized protein OS=Cucumis sativus GN=Csa_7G259350 PE=4 SV=1[more]
A0A0D2V876_GOSRA8.9e-4950.84Uncharacterized protein OS=Gossypium raimondii GN=B456_012G146000 PE=4 SV=1[more]
A0A059AMX4_EUCGR2.0e-4853.25Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01256 PE=4 SV=1[more]
A0A067DT89_CITSI3.4e-4850.00Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041599mg PE=4 SV=1[more]
V4RPW4_9ROSI3.4e-4850.00Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030108mg PE=4 SV=1[more]
BLAST of CmaCh19G006540 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G49330.15.9e-4446.06 hydroxyproline-rich glycoprotein family protein[more]
AT2G16190.18.0e-4142.94 BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glyc... [more]
BLAST of CmaCh19G006540 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659092939|ref|XP_008447299.1|5.5e-6859.40PREDICTED: uncharacterized protein LOC103489770 [Cucumis melo][more]
gi|778730280|ref|XP_011659748.1|5.2e-6658.12PREDICTED: uncharacterized protein LOC105436256 [Cucumis sativus][more]
gi|698426533|ref|XP_009787054.1|3.6e-5150.27PREDICTED: uncharacterized protein LOC104235071 [Nicotiana sylvestris][more]
gi|694397976|ref|XP_009374193.1|6.2e-5151.93PREDICTED: uncharacterized protein LOC103963140 [Pyrus x bretschneideri][more]
gi|657990337|ref|XP_008387394.1|1.1e-5051.93PREDICTED: uncharacterized protein LOC103449851 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh19G006540.1CmaCh19G006540.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34272FAMILY NOT NAMEDcoord: 74..233
score: 1.7
NoneNo IPR availablePANTHERPTHR34272:SF1F13F21.24 PROTEINcoord: 74..233
score: 1.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh19G006540Cucsa.240420Cucumber (Gy14) v1cgycmaB0677
CmaCh19G006540CmoCh19G006640Cucurbita moschata (Rifu)cmacmoB508
CmaCh19G006540Cp4.1LG15g05320Cucurbita pepo (Zucchini)cmacpeB522
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh19G006540Silver-seed gourdcarcmaB0288
CmaCh19G006540Cucumber (Chinese Long) v3cmacucB0608
CmaCh19G006540Cucumber (Chinese Long) v3cmacucB0641
CmaCh19G006540Watermelon (97103) v2cmawmbB531
CmaCh19G006540Wax gourdcmawgoB0641
CmaCh19G006540Wax gourdcmawgoB0668
CmaCh19G006540Cucurbita maxima (Rimu)cmacmaB446
CmaCh19G006540Cucurbita maxima (Rimu)cmacmaB452
CmaCh19G006540Cucumber (Gy14) v1cgycmaB0252
CmaCh19G006540Cucurbita moschata (Rifu)cmacmoB528
CmaCh19G006540Cucurbita moschata (Rifu)cmacmoB518
CmaCh19G006540Wild cucumber (PI 183967)cmacpiB512
CmaCh19G006540Wild cucumber (PI 183967)cmacpiB536
CmaCh19G006540Cucumber (Chinese Long) v2cmacuB507
CmaCh19G006540Cucumber (Chinese Long) v2cmacuB530
CmaCh19G006540Melon (DHL92) v3.5.1cmameB462
CmaCh19G006540Watermelon (Charleston Gray)cmawcgB455
CmaCh19G006540Watermelon (Charleston Gray)cmawcgB460
CmaCh19G006540Watermelon (97103) v1cmawmB503
CmaCh19G006540Watermelon (97103) v1cmawmB505
CmaCh19G006540Cucurbita pepo (Zucchini)cmacpeB526
CmaCh19G006540Cucurbita pepo (Zucchini)cmacpeB549
CmaCh19G006540Bottle gourd (USVL1VR-Ls)cmalsiB469
CmaCh19G006540Bottle gourd (USVL1VR-Ls)cmalsiB472
CmaCh19G006540Cucumber (Gy14) v2cgybcmaB212
CmaCh19G006540Cucumber (Gy14) v2cgybcmaB947
CmaCh19G006540Melon (DHL92) v3.6.1cmamedB538