CmaCh19G005340 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGGTTGATGAGAAGCAATTCTACCATCCTCACACCAATACTTGTGCGACTGGCAAGGTATGTGGCCATTACACTCAAGTGGTGTGGAGAAGCTCGGTGAAAATTGGATGTGCTAAAGTGAAGTGCACAAACAATCGTGGTACATTCATCACTTGCAACTATGATCCACCGGGCAATGTCGTAGGTCAAAGGCCATTTTGAGAATGATTATAACTAAAATAAAAGTACGGGTTAGTGTTACTAAATAAAAACAACTTTAGTTGTGATCTATGCCCTTATGAATGTTTTATATATGGTACATCTTCCTATTATTAATAAAATAATTAAAATGAGAAGGTTTAAATCATGTCTAAAAAATAGTTCGAGATCTCTTAATCATCCGCCTACGCAAACTTCTCATGGCATATAATCATCTCAGGGCACGACCTTATCACTACCAACTCATATTCGTCATAAGTACATATGAAAAGCCTTATCGGTTGAGACAAGTTCACTATTAAGAGTTACTAGCTACCCCTAATAGTAAAGACCCAGTATGATTACCATGAGAAACGATACCTCATGTCGTTGTCAACTAATGATCGACACTTTGTAGACCAACATCACTTGAGATGATGTAATGACCCTAAATTTTTACTTATCTAGAGTCGCTACTGCCATCATAGCGTATATCATTTATATGTAGAAATAAACGTTTAAATTTCTTCATAAAACATAAATTTTATCTTAAAACATTGTCATGGACTCACGTTTTCAAAAACATCTTTAAAACGACACAATGAACTTCTAAATGAAATAAATAAACATTTAAATTAAAAACATCCTATTCTAGCTTAAGTCTAGAAAATAAATGTAATTATCCTATGCATATGACAGAGTCTCGAATTGCAATACTGTCATCAGCCGTATAGGGATATCTTGCCTTTAATTAGGATAGAAGTAGCACGTGGCTTGAATATTTAAAGAAATACTTATTAAGTGACCTCACTATTGGAAGTAAATGCAAACACATATAATCATGAATGAGAGCTATCATATCAGCCTATTTTCATAAGGTGACTATCATAAATAGACAATTGAATAATTTAGCCTAGTCAATATCGTGAATGGCCCATAATTTAGCCTATATGTATGTGTATATGTATACTTAAATTATACAATTGCCATTAGACACATAATTTATACAATGGCCCATTAGACACGTATGATTATAAAATGTTTATGAAATTATATAATTATGATATATTATATTAATGTTATGATACGTGTTCACGTTAATCTTAATCAAGATTAGGAATTACTCTAGTTAATTCTTATAAATATAATTTAATGAAATATAAAAAGTTTTATAAGATTATTTTCATTATGTGAGATTTTTTTTTTTATATAAAAAAAACGGCATCGAATCCCATTGTATAATTTAGCAAAATAGTTTGGCCAAAGTTTGAACTTCAAAACATATGTCATTGGCTCAAATAGGTTGACTTGGATTTCAAATGACAAAATCGAACTTTCATTAAGAATAAATTGGTGACACTAGCTTAAGCTAGTCAACTAAGTGTCCTTACTATTGGTATGTTAGAAGATGTTTGTATGATGAAACGTATCTTGTGGTTCTGCACGTGTCATATTCTTGATATGTTTGAAATATTTATGAAATGATGTGACTATGATATGTATAGGGAACGATATGACTATGATTCGTTTATGAAATGATATAACTCTAATATGTTTATGAAATGATATGATTATGAAATGTCTGTGACGTGATATGATTTTGAGATGTTATGACACGTGTTATAATGTGACATGCTGAATATACAATATATGTTAATCTTTATCAAAATTAATTTCATGAGAGGTGTCGGTTATGATTACTAATAACTAATTTCATCAATCCATCTGCCTCTCACACGCAAAAGATGTCATTTCTGTCCTGATCTATGTCCTGAGCTTTGTCATGCTTCCCTCGTCTCTCGCTCAAGACTCGCCTCAAGACTTTGTCAATGCCCACAATGCAGCTCGTGCCCAAGTTGGTGTCGGACCAGTTCTATGGGACGAAAGTGTAGCTAATTTTGCTCGACAATTTTCCAACCAACGCATTAATGATTGTCAATTGGTGCACTCAGGCGAACCATTTGGAGAGAATATTGCAAAGCATAGCTCTGACTTGTCAAGCACTGATGCAGTTCAGATGTGGGTCGATGAGAAGTCATTCTACAATCCTCACACCAATACTTGTGCAGCTGGCAAGGTGTGTAGCCATTACACTCAAGTGGTTTGGAGAAACTCAGTGAGAATTGGATGTGCTAAAGTTAAATGCACAAATAATCGTGGTACATTCATCACTTGCAGCTATGATCCACCAGACAATATCTCAAGCGAAAGACCATTCAGTACTGATCTGTTAATTAGAATTGCTAAATAAAAACCACTTTAGATATGATCTATTGTTGATCATACTATTATGACATACATGTATACTCAACGAGAGTTACTAAATAAAAACAACTTTAGATGTGATCTATCCATTGATCAAATCATTATAAATGTGTTTAGATGTGATCCATCTACGGATCATATTATTATGAATGTTATATATATAGTCTATGAAAGATAGTAAATAAAAATATCTTTATGAATATTATATTTATGTATATATATATATATATATATATATATATATATATTATTAATGAAATAATGAAAATGAGAAGGTTTATTATAAGATCAATGTAATAATATAAAGGATACATTTTAATGCTATAATTATAATTATATATAATATTATAAATATGCAAATCAAAAGCTAATAATAACAAATTAATTAATAATAACTAATCTCATCTCTAAGGTAATAGGGCTCCGGTTAATAGTCATATTTTACTTTTTCTTTTATGGAAGAATATTAATTTTGTTGTAATTAAATAAATTTGAGTTAGAAATTAAATGACAAGAATTAATTTTCTTGCAACGGGCAATTTTGCTTTTTTTGTCTTTTTTTTTTATCGTTAAAGAGAAGATTATTAAGGAAAATATCATTAGGGAGATTGTCGAAGTCATTATAAGAAATAATAGATACGATAGCTTACAAAAAAAAACATTATGATAGACTTTTTATAATGTTTTTTTGTATGTCGTGACAGCTCATGTTATTAAAAGTCTAAAACTTTTTATAACTTTTTCTATAGCTATAATGGCTGTTACAGTAGAGTATGAAACTATAGCTGATATACATACGTTGTTAAGAAAATATTTTATAGCATTTTTTTTAAAACTATAATTTGTTTAATATAACTAAAATATTTTGTTATCTTTAAATTATAATAACATTTTTTATCTCTTCATCCTGAATCGCGGATAAAAAACTTGGTTAGCCCAACTTAATTTATATGGTTTTCGAGTTGTTTTTAAATAAATGAAATTCTTTTTACCAGATTTGTTCATTGGTTTTTCTCCAATCAGATTTAGTTGAATTGGTTTTAAAAAATGTCTTAACTATATAATATCATATTATTGTAGAAATTTTACACATGAACAATTGGTTTAGGTCTAAAAGCTACCTCAACCCAACTTAAAAACGCTCCTTGCTCAACTCCGAGATTTGATAAAATTTGATAAAATTTGGAGTAAATACATTTCAAAGATTTTTATTTTTATATGCAAGTAAACTATCGATATAACTATTTTAATTAATAATAATAGTATGATATTTTATTTGAGAGTCTCTAATTTATGTTTTTTTAAGTTCAGATACGATGGCGGAGGAAAACTTCTAATCTTTTCTTTTCGAGTTTCCCCTCAAGACTTTTAAAATATGTCTACTAGAGAAAGGTTTTCACACCCTTAAAAACGGTGTTTCGTTCTCCTCCTCAACCGATGGGATTCAAACAATCTACCCCCTTTAGGGTCCAGTGTTCTCGTTGACACTTACTTGTTCCCTTCTTCTATTGATGTGGGACCACTACCAAAACCACCCCCCTTCGGGCCCAGCGTCCTAATTGGCGATGTTTCATTCTCCTTCCAACCCATATGGGATCAAACAATTCACTCCCATTCAGGGTCCAACATCTTCGCTAGCACTCATTCCTTTCTCAAATCGCTGTGAGACCACCACTAAATTCATCCCCCTTCGAGCCCCAGCGTCCTTATTGACACACCGCCTTGTGTCTACCCCTTCTTCTATCTGGCTTTGATACCATTTGTATCGATGCCAGAAGATATTGTTCCCTTTAGGTTTTTCTTTCGAATTTCCCCAAAAGATTTTTCAAACGTGCCTGGTAGGAAAAAATTTCCACATCTTTATAAAGGGTGTTAAGTTGTGCTCACCAACCGAGGTGGATCTCACAATACATTTGTAAATTAGACGATTTAAAAATTCATAATTCATAAGATTCATTGATTTTTTTATCCTTATTTAATAAGTTTGTTTTTTTAGCATATTTTATTACAACAAGTGGGATATGTATGCTACGCTTAAGCCCACAAACTTAAAATAATGTCCTTCGTATAATATTCCACAACCTCATGCTTATAAATCACACTCATAGCCATCCAATTTTCTCCACACCAAACTTCTAACCATTCTATCACAACTCCATCTCCAAATAATGGATCTTTTTAAGCTCTCCCTCTTCCTCTTCTATGTTTCGATCTTTTCGATGCTTCCCTCGTCTCTCGCTCAAGATTCTCCTCAAACTTTGTCAATGCCCATAATGCAGCTCGTGACCTTGTTGGCGTTGGGTCGGTCATATGGGACGAAAGGGTAGCTAGATTTGCTCGACAATATGCCAACCAACGCAAACATAACTGTAAGTTGGTGCACTCAGGCGGACCATATGGAGAAAATCTTGCATGGAGCGGCTACAACTTATCAGCCATTGCTGCAGTTTGGATGTGGGTCACTAAGAAGCAATATGACAATTCTCGCACCAATACTTGTGCAGCTGGCAAAGTGTGTGGTCATTACACTCAAGATGTGTGAAGAAAGTCGGTGAAAATTGGATGTGCCAAAATGAGATGCACAAACAATTGTGGTACGTTCATCACTTGCAACTATGATTCACCGGACAATGTCAGAGGTCAAAGGCCATTCTGATAATGATTATAACTAAAATAAAAGTACACGTTAGAGTTACTAAATAAAAACAACTTTAGTTGTGATGTATGCACTTATGATTGTTTTAGATATGGTTCATCTTCCTAATATTAATAAAATAA ATGTGGGTTGATGAGAAGCAATTCTACCATCCTCACACCAATACTTGTGCGACTGGCAAGGTATGTGGCCATTACACTCAAGTGGTGTGGAGAAGCTCGGTGAAAATTGGATGTGCTAAAGTGAAGTGCACAAACAATCGTGGTACATTCATCACTTGCAACTATGATCCACCGGGCAATGTCGTAGATGTCATTTCTGTCCTGATCTATGTCCTGAGCTTTGTCATGCTTCCCTCGTCTCTCGCTCAAGACTCGCCTCAAGACTTTGTCAATGCCCACAATGCAGCTCGTGCCCAAGTTGGTGTCGGACCAGTTCTATGGGACGAAAGTGTAGCTAATTTTGCTCGACAATTTTCCAACCAACGCATTAATGATTGTCAATTGGTGCACTCAGGCGAACCATTTGGAGAGAATATTGCAAAGCATAGCTCTGACTTGTCAAGCACTGATGCAGTTCAGATGTGGGTCGATGAGAAGTCATTCTACAATCCTCACACCAATACTTGTGCAGCTGGCAAGGTGTGTAGCCATTACACTCAAGTGGTTTGGAGAAACTCAGTGAGAATTGGATGTGCTAAAGTTAAATGCACAAATAATCGTGGTACATTCATCACTTGCAGCTATGATCCACCAGACAATATCTCAAGCGAAAGACCATTCACTCTCCCTCTTCCTCTTCTATGTTTCGATCTTTTCGATGCTTCCCTCGTCTCTCGCTCAAGATTCTCCTCAAACTTTGTCAATGCCCATAATGCAGCTCGTGACCTTGTTGGCGTTGGGTCGGTCATATGGGACGAAAGGGTAGCTAGATTTGCTCGACAATATGCCAACCAACGCAAACATAACTGTAAGTTGGTGCACTCAGGCGGACCATATGGAGAAAATCTTGCATGGAGCGGCTACAACTTATCAGCCATTGCTGCAGTTTGGATGTGGGTCACTAAGAAGCAATATGACAATTCTCGCACCAATACTTGTGCAGCTGGCAAAATATGGTTCATCTTCCTAATATTAATAAAATAA ATGTGGGTTGATGAGAAGCAATTCTACCATCCTCACACCAATACTTGTGCGACTGGCAAGGTATGTGGCCATTACACTCAAGTGGTGTGGAGAAGCTCGGTGAAAATTGGATGTGCTAAAGTGAAGTGCACAAACAATCGTGGTACATTCATCACTTGCAACTATGATCCACCGGGCAATGTCGTAGATGTCATTTCTGTCCTGATCTATGTCCTGAGCTTTGTCATGCTTCCCTCGTCTCTCGCTCAAGACTCGCCTCAAGACTTTGTCAATGCCCACAATGCAGCTCGTGCCCAAGTTGGTGTCGGACCAGTTCTATGGGACGAAAGTGTAGCTAATTTTGCTCGACAATTTTCCAACCAACGCATTAATGATTGTCAATTGGTGCACTCAGGCGAACCATTTGGAGAGAATATTGCAAAGCATAGCTCTGACTTGTCAAGCACTGATGCAGTTCAGATGTGGGTCGATGAGAAGTCATTCTACAATCCTCACACCAATACTTGTGCAGCTGGCAAGGTGTGTAGCCATTACACTCAAGTGGTTTGGAGAAACTCAGTGAGAATTGGATGTGCTAAAGTTAAATGCACAAATAATCGTGGTACATTCATCACTTGCAGCTATGATCCACCAGACAATATCTCAAGCGAAAGACCATTCACTCTCCCTCTTCCTCTTCTATGTTTCGATCTTTTCGATGCTTCCCTCGTCTCTCGCTCAAGATTCTCCTCAAACTTTGTCAATGCCCATAATGCAGCTCGTGACCTTGTTGGCGTTGGGTCGGTCATATGGGACGAAAGGGTAGCTAGATTTGCTCGACAATATGCCAACCAACGCAAACATAACTGTAAGTTGGTGCACTCAGGCGGACCATATGGAGAAAATCTTGCATGGAGCGGCTACAACTTATCAGCCATTGCTGCAGTTTGGATGTGGGTCACTAAGAAGCAATATGACAATTCTCGCACCAATACTTGTGCAGCTGGCAAAATATGGTTCATCTTCCTAATATTAATAAAATAA MWVDEKQFYHPHTNTCATGKVCGHYTQVVWRSSVKIGCAKVKCTNNRGTFITCNYDPPGNVVDVISVLIYVLSFVMLPSSLAQDSPQDFVNAHNAARAQVGVGPVLWDESVANFARQFSNQRINDCQLVHSGEPFGENIAKHSSDLSSTDAVQMWVDEKSFYNPHTNTCAAGKVCSHYTQVVWRNSVRIGCAKVKCTNNRGTFITCSYDPPDNISSERPFTLPLPLLCFDLFDASLVSRSRFSSNFVNAHNAARDLVGVGSVIWDERVARFARQYANQRKHNCKLVHSGGPYGENLAWSGYNLSAIAAVWMWVTKKQYDNSRTNTCAAGKIWFIFLILIK
BLAST of CmaCh19G005340 vs. Swiss-Prot
Match: PR1_SAMNI (Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 2.4e-51 Identity = 96/155 (61.94%), Postives = 123/155 (79.35%), Query Frame = 1
BLAST of CmaCh19G005340 vs. Swiss-Prot
Match: PRB1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 6.0e-47 Identity = 87/157 (55.41%), Postives = 118/157 (75.16%), Query Frame = 1
BLAST of CmaCh19G005340 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 3.9e-46 Identity = 84/154 (54.55%), Postives = 115/154 (74.68%), Query Frame = 1
BLAST of CmaCh19G005340 vs. Swiss-Prot
Match: PR13_HORVU (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 5.1e-46 Identity = 87/159 (54.72%), Postives = 112/159 (70.44%), Query Frame = 1
BLAST of CmaCh19G005340 vs. Swiss-Prot
Match: PR12_HORVU (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 8.7e-46 Identity = 86/156 (55.13%), Postives = 110/156 (70.51%), Query Frame = 1
BLAST of CmaCh19G005340 vs. TrEMBL
Match: A0A067KWY2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09851 PE=3 SV=1) HSP 1 Score: 389.0 bits (998), Expect = 5.8e-105 Identity = 189/331 (57.10%), Postives = 230/331 (69.49%), Query Frame = 1
BLAST of CmaCh19G005340 vs. TrEMBL
Match: A0A067KN70_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06940 PE=3 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 1.1e-71 Identity = 139/267 (52.06%), Postives = 177/267 (66.29%), Query Frame = 1
BLAST of CmaCh19G005340 vs. TrEMBL
Match: A0A103XME5_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_004588 PE=3 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 1.1e-71 Identity = 145/328 (44.21%), Postives = 190/328 (57.93%), Query Frame = 1
BLAST of CmaCh19G005340 vs. TrEMBL
Match: A0A0A0K6A4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070253 PE=3 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 6.2e-59 Identity = 110/153 (71.90%), Postives = 126/153 (82.35%), Query Frame = 1
BLAST of CmaCh19G005340 vs. TrEMBL
Match: M8BEE3_AEGTA (Cysteine-rich receptor-like protein kinase 29 OS=Aegilops tauschii GN=F775_23106 PE=3 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 4.9e-56 Identity = 114/255 (44.71%), Postives = 156/255 (61.18%), Query Frame = 1
BLAST of CmaCh19G005340 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1) HSP 1 Score: 189.5 bits (480), Expect = 3.4e-48 Identity = 87/157 (55.41%), Postives = 118/157 (75.16%), Query Frame = 1
BLAST of CmaCh19G005340 vs. TAIR10
Match: AT3G19690.1 (AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein) HSP 1 Score: 187.2 bits (474), Expect = 1.7e-47 Identity = 83/155 (53.55%), Postives = 114/155 (73.55%), Query Frame = 1
BLAST of CmaCh19G005340 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein) HSP 1 Score: 178.7 bits (452), Expect = 6.0e-45 Identity = 84/146 (57.53%), Postives = 103/146 (70.55%), Query Frame = 1
BLAST of CmaCh19G005340 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1) HSP 1 Score: 178.7 bits (452), Expect = 6.0e-45 Identity = 85/154 (55.19%), Postives = 109/154 (70.78%), Query Frame = 1
BLAST of CmaCh19G005340 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein) HSP 1 Score: 167.2 bits (422), Expect = 1.8e-41 Identity = 79/155 (50.97%), Postives = 113/155 (72.90%), Query Frame = 1
BLAST of CmaCh19G005340 vs. NCBI nr
Match: gi|643728186|gb|KDP36354.1| (hypothetical protein JCGZ_09851 [Jatropha curcas]) HSP 1 Score: 389.0 bits (998), Expect = 8.3e-105 Identity = 189/331 (57.10%), Postives = 230/331 (69.49%), Query Frame = 1
BLAST of CmaCh19G005340 vs. NCBI nr
Match: gi|802609354|ref|XP_012074124.1| (PREDICTED: pathogenesis-related protein PR-1 type-like [Jatropha curcas]) HSP 1 Score: 291.6 bits (745), Expect = 1.8e-75 Identity = 137/219 (62.56%), Postives = 164/219 (74.89%), Query Frame = 1
BLAST of CmaCh19G005340 vs. NCBI nr
Match: gi|802600126|ref|XP_012072778.1| (PREDICTED: pathogenesis-related protein 1-like [Jatropha curcas]) HSP 1 Score: 279.6 bits (714), Expect = 7.1e-72 Identity = 139/268 (51.87%), Postives = 178/268 (66.42%), Query Frame = 1
BLAST of CmaCh19G005340 vs. NCBI nr
Match: gi|976905743|gb|KVH93360.1| (hypothetical protein Ccrd_004588 [Cynara cardunculus var. scolymus]) HSP 1 Score: 278.5 bits (711), Expect = 1.6e-71 Identity = 145/328 (44.21%), Postives = 190/328 (57.93%), Query Frame = 1
BLAST of CmaCh19G005340 vs. NCBI nr
Match: gi|643729909|gb|KDP37597.1| (hypothetical protein JCGZ_06940 [Jatropha curcas]) HSP 1 Score: 278.5 bits (711), Expect = 1.6e-71 Identity = 139/267 (52.06%), Postives = 177/267 (66.29%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |