CmaCh19G005040 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh19G005040
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Sphingolipid transporter spinster-like protein, putative
Location	Cma_Chr19 : 5960938 .. 5962870 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTTCTGCTTCCTCCGATGTTAGTTCCAACCAATCTTGGTTCACGCCATTGCGGTACTATTCTTACTTTTCTCGTATTTTGGTTTTTAAATATGATAGCAATATTTGAAATTTGCATCCTTCGTCATCTATGTTTGATTAATCTCTTTAGACTTCAACTCATTTATATTTTTTTTAACTTTAAATCTCTGTTTATTTATTTTATAGACTACTTGTTCTGTTTTGTGTCATCCATTTAATTAATTACATGGATAGAGGAGTTATTTCAAGCAATGGTGTGAATGGAATCCCAAAAACATGTGGTGCCCATGGCATGTGCACATCTGGTTCCGGGATCCAGTAAGATTTATTTGAAGTGCATTTGATAATATTTTATTGTCAATTTGTTGATCTTTTGTAAGATGTTTTTAATGGATTATTATGATTAGGGGACAATTTAAGTTAACCAATTTTGAGGACGGAATTTTATCTTCTGCATTTATGGTTGGACTTCTTCTAGCTTGTCCAATATTCGCGTCATTGTCGAAGAGGTAATCTAAATAATTGTTGAGCATATTGTCGATTATGATTAAGTATAATTTGTTCGACTTGTAATATAATTTAAATTTTGCAGGATAAATCCATTTCGACTCATAGGTGTTGGATTATCTATTTGGACTTTGTCACTAATTGGATGTGGTTTTTCATTTAATTTCTGGTCGATTGTTGTCTGTCGCATGTGAGTAAACATCTTTTATTTTTTCCCCTATTCAATCTTTTCTTTTCAACTTGACTCTCATGAATGCAATGCTTTTTCTTCGTAGGATTGTGGGTGTTGGTGAGGCATCGTTTATAAGTCTTGCGGCGCCATTTATTTATGATAATGCACCCGCTCATAAGGTTCATTTCATATTCATCACAATAATATACTAGTAATGTTTTAGCATATCGTCTATATAGTTGAAAACATTTTCTTATTCATCACAATAATATACTACATTGTGTGAGGCCTAGTCTAAGGCCGCTTTCCATGGCTATGTCTACGGTTGCAATTCACATTTTTGGAGATGTGCCATCTTCACCTCTTGTTGGAGTTCTCGAGGTTTGTTCTTTAGAAGTTAAGCTCTATTTGATACGTTTTAAGTTACGTTTTACCAATCAAGTTTTAACAATGGTTTACTCAATTTTGTAGGACCATCTTAACAATTGGAGGAAGACTACTCTCATCCTCACAACCATTTTTTTCCCAGCTGCTATTATATGGTTTATAGGTAAATGTTAGAACACATAGACATATGATACAAATATGACAACACGAACACGTAATTTCTAAAAGTAGGCGACATTAGAGACTGTATCAATCATTAAACATCAAATGAGAATAATGTTGATTCTTTAAGTGGGTGTTTCGTTACCGTTTAATATGTTTTTTTCTTTGAGTTCAACGACATATGGGGCAAGAGATGCATTAATTAGTTGACCTATACTCTAGTGGGCAGTATTCTTGTTTTTTTATGAATATTCATGAGTTATTTTTCTTTCATCTTTGAAAACATGTCATAATTAGATCGTAATGTTCATGCATGTTCATGTTGATATCGACACTATGTTTGAGTATCTGTCTTTTATTAGAAAAGAATAAATATTGATTATTATATTGGTACATTTTTTCTTTTCAGAGTGTTTTTTGATGATATAAATGAAGAGGATGTGCAACAAGGCACAATTAATGGATTGAAAGCAAGACATTCCTTAAAAACAAAAAAATTATCTCAAACAATTCGAAGTTCTTCACTAGTGTAGAGTCTTTTACTTAATTTTTTAGAGTATGATTGCAATATTTTTATTGTAAATATTTATTTTTTCAATTATGAGGAGAATAGAGTTGAAAAGCATTAGATTTTATTTTATTTTATTTATTTATGGTTATTTTTTCAGGATTAAATTGA

mRNA sequence

ATGGCTACTTCTGCTTCCTCCGATGTTAGTTCCAACCAATCTTGGTTCACGCCATTGCGACTACTTGTTCTGTTTTGTGTCATCCATTTAATTAATTACATGGATAGAGGAGTTATTTCAAGCAATGGTGTGAATGGAATCCCAAAAACATGTGGTGCCCATGGCATGTGCACATCTGGTTCCGGGATCCAGGGACAATTTAAGTTAACCAATTTTGAGGACGGAATTTTATCTTCTGCATTTATGGTTGGACTTCTTCTAGCTTGTCCAATATTCGCGTCATTGTCGAAGAGTCTAAGGCCGCTTTCCATGGCTATGTCTACGGTTGCAATTCACATTTTTGGAGATGTGCCATCTTCACCTCTTGTTGGAGTTCTCGAGGACCATCTTAACAATTGGAGGAAGACTACTCTCATCCTCACAACCATTTTTTTCCCAGCTGCTATTATATGGTTTATAGGATTAAATTGA

Coding sequence (CDS)

ATGGCTACTTCTGCTTCCTCCGATGTTAGTTCCAACCAATCTTGGTTCACGCCATTGCGACTACTTGTTCTGTTTTGTGTCATCCATTTAATTAATTACATGGATAGAGGAGTTATTTCAAGCAATGGTGTGAATGGAATCCCAAAAACATGTGGTGCCCATGGCATGTGCACATCTGGTTCCGGGATCCAGGGACAATTTAAGTTAACCAATTTTGAGGACGGAATTTTATCTTCTGCATTTATGGTTGGACTTCTTCTAGCTTGTCCAATATTCGCGTCATTGTCGAAGAGTCTAAGGCCGCTTTCCATGGCTATGTCTACGGTTGCAATTCACATTTTTGGAGATGTGCCATCTTCACCTCTTGTTGGAGTTCTCGAGGACCATCTTAACAATTGGAGGAAGACTACTCTCATCCTCACAACCATTTTTTTCCCAGCTGCTATTATATGGTTTATAGGATTAAATTGA

Protein sequence

MATSASSDVSSNQSWFTPLRLLVLFCVIHLINYMDRGVISSNGVNGIPKTCGAHGMCTSGSGIQGQFKLTNFEDGILSSAFMVGLLLACPIFASLSKSLRPLSMAMSTVAIHIFGDVPSSPLVGVLEDHLNNWRKTTLILTTIFFPAAIIWFIGLN

Homology

[Close]

BLAST of CmaCh19G005040 vs. Swiss-Prot
Match: SPNS2_ARATH (Probable sphingolipid transporter spinster homolog 2 OS=Arabidopsis thaliana GN=At5g64500 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 8.9e-30
Identity = 62/97 (63.92%), Postives = 78/97 (80.41%), Query Frame = 1


Query: 8   DVSSNQSWFTPLRLLVLFCVIHLINYMDRGVISSNGVNGIPKTCGAHGMCTSGSGIQGQF 67
           D  S  SWFTP +LL +FCV++LINY+DRG I+SNG+NG   +C + G C+SGSGIQG F
Sbjct: 25  DPISEPSWFTPKKLLFVFCVVNLINYIDRGAIASNGINGSRGSCTSSGTCSSGSGIQGDF 84

Query: 68  KLTNFEDGILSSAFMVGLLLACPIFASLSKSLRPLSM 105
            L+NFEDG+LSSAFMVGLL+A PIFASL+KS+ P  +
Sbjct: 85  NLSNFEDGVLSSAFMVGLLVASPIFASLAKSVNPFRL 121

[Close]

BLAST of CmaCh19G005040 vs. Swiss-Prot
Match: SPNS1_ARATH (Probable sphingolipid transporter spinster homolog 1 OS=Arabidopsis thaliana GN=At5g65687 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 4.1e-27
Identity = 57/95 (60.00%), Postives = 75/95 (78.95%), Query Frame = 1


Query: 10  SSNQSWFTPLRLLVLFCVIHLINYMDRGVISSNGVNGIPKTCGAHGMCTSGSGIQGQFKL 69
           ++ + + TP R + + C+I+LINY+DRGVI+SNGVNG  K C A G+C++G+GIQG+F L
Sbjct: 18  ATKKRFLTPGRFVTILCIINLINYVDRGVIASNGVNGSSKVCDAKGVCSAGTGIQGEFNL 77

Query: 70  TNFEDGILSSAFMVGLLLACPIFASLSKSLRPLSM 105
           TNFEDG+LSSAFMVGLL+A PIFA LSK   P  +
Sbjct: 78  TNFEDGLLSSAFMVGLLVASPIFAGLSKRFNPFKL 112

[Close]

BLAST of CmaCh19G005040 vs. Swiss-Prot
Match: SPNS3_ARATH (Probable sphingolipid transporter spinster homolog 3 OS=Arabidopsis thaliana GN=At2g22730 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 7.1e-27
Identity = 59/111 (53.15%), Postives = 83/111 (74.77%), Query Frame = 1


Query: 1   MATSASSDVSSNQSWFTPLRLLVLFCVIHLINYMDRGVISSNGVNGIPKTCGAHGMCTSG 60
           + T  S ++  + S  +P+ LLV+FC+I+L+NYMDRG I+SNGVNG  ++C   G CT  
Sbjct: 31  LETVRSLEIVESSSSLSPVWLLVIFCIINLLNYMDRGAIASNGVNGSTRSCNDKGKCTLA 90

Query: 61  SGIQGQFKLTNFEDGILSSAFMVGLLLACPIFASLSKSLRPLSMAMSTVAI 112
           +GIQG F L+NFEDG+LSS+FMVGLL+A PIFASL+K L  + + + T+A+
Sbjct: 91  TGIQGHFNLSNFEDGVLSSSFMVGLLIASPIFASLAKRLIGVGLTVWTIAV 141

[Close]

BLAST of CmaCh19G005040 vs. TrEMBL
Match: E5GCQ6_CUCME (Putative transporter OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.3e-32
Identity = 71/99 (71.72%), Postives = 82/99 (82.83%), Query Frame = 1


Query: 6   SSDVSSNQSWFTPLRLLVLFCVIHLINYMDRGVISSNGVNGIPKTCGAHGMCTSGSGIQG 65
           S + +SN SWFTPLRLL++FCVIHLINYMDRG ++SNGVNG    C A G CT+GSGIQG
Sbjct: 21  SVNEASNPSWFTPLRLLIIFCVIHLINYMDRGAMASNGVNGHRTICTADGTCTAGSGIQG 80

Query: 66  QFKLTNFEDGILSSAFMVGLLLACPIFASLSKSLRPLSM 105
           QF L+NFEDG+LSSAFMVGLLLACPIFASL+K   P  +
Sbjct: 81  QFNLSNFEDGVLSSAFMVGLLLACPIFASLAKRANPFRL 119

[Close]

BLAST of CmaCh19G005040 vs. TrEMBL
Match: A0A0A0K295_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067500 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 8.7e-32
Identity = 73/111 (65.77%), Postives = 87/111 (78.38%), Query Frame = 1


Query: 6   SSDVSSNQSWFTPLRLLVLFCVIHLINYMDRGVISSNGVNGIPKTCGAHGMCTSGSGIQG 65
           S + +SN SWFTPLRLL++FCVIHLINYMDRG ++SNGVNG    C   G CT GSGIQG
Sbjct: 21  SVNEASNPSWFTPLRLLIIFCVIHLINYMDRGAMASNGVNGHRTICTPDGTCTPGSGIQG 80

Query: 66  QFKLTNFEDGILSSAFMVGLLLACPIFASLSKSLRP-----LSMAMSTVAI 112
           QF L+NFEDG+LSSAFMVGLLLACPIFASL+K   P     + +++ TVA+
Sbjct: 81  QFNLSNFEDGVLSSAFMVGLLLACPIFASLAKRANPFRLIGVGLSVWTVAV 131

[Close]

BLAST of CmaCh19G005040 vs. TrEMBL
Match: B9SSD9_RICCO (Transporter, putative OS=Ricinus communis GN=RCOM_0188460 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 7.4e-31
Identity = 69/104 (66.35%), Postives = 85/104 (81.73%), Query Frame = 1


Query: 1   MATSASSDVSSNQSWFTPLRLLVLFCVIHLINYMDRGVISSNGVNGIPKTCGAHGMCTSG 60
           MA ++++D SS+ SWFTP RLL+LFCVI++INY+DRG I+SNGVNG  +TC   G+C SG
Sbjct: 1   MARTSTNDSSSDPSWFTPKRLLMLFCVINMINYVDRGAIASNGVNGSIRTCDEKGICNSG 60

Query: 61  SGIQGQFKLTNFEDGILSSAFMVGLLLACPIFASLSKSLRPLSM 105
           SGIQG F L NF+DG+LSSAFMVGLLLA PIFASL+KS  P  +
Sbjct: 61  SGIQGDFNLNNFQDGVLSSAFMVGLLLASPIFASLAKSHNPFRL 104

[Close]

BLAST of CmaCh19G005040 vs. TrEMBL
Match: U5G3T4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s08460g PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.1e-30
Identity = 72/116 (62.07%), Postives = 90/116 (77.59%), Query Frame = 1


Query: 1   MATSASSDVSSNQSWFTPLRLLVLFCVIHLINYMDRGVISSNGVNGIPKTCGAHGMCTSG 60
           MA S+++      SWFTP RLLV+FCVI+LINY+DRG I+SNGVNG  +TC   G CT G
Sbjct: 1   MARSSTALSPPAPSWFTPKRLLVIFCVINLINYVDRGAIASNGVNGSRRTCSKSGTCTFG 60

Query: 61  SGIQGQFKLTNFEDGILSSAFMVGLLLACPIFASLSKSLRP-----LSMAMSTVAI 112
           SGIQG F L+NFEDG+LSSAFMVGLL+ACPIFASL+KS+ P     + +++ TVA+
Sbjct: 61  SGIQGDFNLSNFEDGVLSSAFMVGLLVACPIFASLAKSVNPFRLIGVGLSVWTVAV 116

[Close]

BLAST of CmaCh19G005040 vs. TrEMBL
Match: B9HN62_POPTR (Transporter-related family protein OS=Populus trichocarpa GN=POPTR_0009s08460g PE=4 SV=2)

HSP 1 Score: 140.2 bits (352), Expect = 2.1e-30
Identity = 72/116 (62.07%), Postives = 90/116 (77.59%), Query Frame = 1


Query: 1   MATSASSDVSSNQSWFTPLRLLVLFCVIHLINYMDRGVISSNGVNGIPKTCGAHGMCTSG 60
           MA S+++      SWFTP RLLV+FCVI+LINY+DRG I+SNGVNG  +TC   G CT G
Sbjct: 1   MARSSTALSPPAPSWFTPKRLLVIFCVINLINYVDRGAIASNGVNGSRRTCSKSGTCTFG 60

Query: 61  SGIQGQFKLTNFEDGILSSAFMVGLLLACPIFASLSKSLRP-----LSMAMSTVAI 112
           SGIQG F L+NFEDG+LSSAFMVGLL+ACPIFASL+KS+ P     + +++ TVA+
Sbjct: 61  SGIQGDFNLSNFEDGVLSSAFMVGLLVACPIFASLAKSVNPFRLIGVGLSVWTVAV 116

[Close]

BLAST of CmaCh19G005040 vs. TAIR10
Match: AT5G64500.1 (AT5G64500.1 Major facilitator superfamily protein)

HSP 1 Score: 131.3 bits (329), Expect = 5.0e-31
Identity = 62/97 (63.92%), Postives = 78/97 (80.41%), Query Frame = 1


Query: 8   DVSSNQSWFTPLRLLVLFCVIHLINYMDRGVISSNGVNGIPKTCGAHGMCTSGSGIQGQF 67
           D  S  SWFTP +LL +FCV++LINY+DRG I+SNG+NG   +C + G C+SGSGIQG F
Sbjct: 25  DPISEPSWFTPKKLLFVFCVVNLINYIDRGAIASNGINGSRGSCTSSGTCSSGSGIQGDF 84

Query: 68  KLTNFEDGILSSAFMVGLLLACPIFASLSKSLRPLSM 105
            L+NFEDG+LSSAFMVGLL+A PIFASL+KS+ P  +
Sbjct: 85  NLSNFEDGVLSSAFMVGLLVASPIFASLAKSVNPFRL 121

[Close]

BLAST of CmaCh19G005040 vs. TAIR10
Match: AT5G65687.1 (AT5G65687.1 Major facilitator superfamily protein)

HSP 1 Score: 122.5 bits (306), Expect = 2.3e-28
Identity = 57/95 (60.00%), Postives = 75/95 (78.95%), Query Frame = 1


Query: 10  SSNQSWFTPLRLLVLFCVIHLINYMDRGVISSNGVNGIPKTCGAHGMCTSGSGIQGQFKL 69
           ++ + + TP R + + C+I+LINY+DRGVI+SNGVNG  K C A G+C++G+GIQG+F L
Sbjct: 18  ATKKRFLTPGRFVTILCIINLINYVDRGVIASNGVNGSSKVCDAKGVCSAGTGIQGEFNL 77

Query: 70  TNFEDGILSSAFMVGLLLACPIFASLSKSLRPLSM 105
           TNFEDG+LSSAFMVGLL+A PIFA LSK   P  +
Sbjct: 78  TNFEDGLLSSAFMVGLLVASPIFAGLSKRFNPFKL 112

[Close]

BLAST of CmaCh19G005040 vs. TAIR10
Match: AT2G22730.1 (AT2G22730.1 Major facilitator superfamily protein)

HSP 1 Score: 121.7 bits (304), Expect = 4.0e-28
Identity = 59/111 (53.15%), Postives = 83/111 (74.77%), Query Frame = 1


Query: 1   MATSASSDVSSNQSWFTPLRLLVLFCVIHLINYMDRGVISSNGVNGIPKTCGAHGMCTSG 60
           + T  S ++  + S  +P+ LLV+FC+I+L+NYMDRG I+SNGVNG  ++C   G CT  
Sbjct: 31  LETVRSLEIVESSSSLSPVWLLVIFCIINLLNYMDRGAIASNGVNGSTRSCNDKGKCTLA 90

Query: 61  SGIQGQFKLTNFEDGILSSAFMVGLLLACPIFASLSKSLRPLSMAMSTVAI 112
           +GIQG F L+NFEDG+LSS+FMVGLL+A PIFASL+K L  + + + T+A+
Sbjct: 91  TGIQGHFNLSNFEDGVLSSSFMVGLLIASPIFASLAKRLIGVGLTVWTIAV 141

[Close]

BLAST of CmaCh19G005040 vs. NCBI nr
Match: gi|659110202|ref|XP_008455103.1| (PREDICTED: probable sphingolipid transporter spinster homolog 2 isoform X1 [Cucumis melo])

HSP 1 Score: 147.5 bits (371), Expect = 1.9e-32
Identity = 71/99 (71.72%), Postives = 82/99 (82.83%), Query Frame = 1


Query: 6   SSDVSSNQSWFTPLRLLVLFCVIHLINYMDRGVISSNGVNGIPKTCGAHGMCTSGSGIQG 65
           S + +SN SWFTPLRLL++FCVIHLINYMDRG ++SNGVNG    C A G CT+GSGIQG
Sbjct: 21  SVNEASNPSWFTPLRLLIIFCVIHLINYMDRGAMASNGVNGHRTICTADGTCTAGSGIQG 80

Query: 66  QFKLTNFEDGILSSAFMVGLLLACPIFASLSKSLRPLSM 105
           QF L+NFEDG+LSSAFMVGLLLACPIFASL+K   P  +
Sbjct: 81  QFNLSNFEDGVLSSAFMVGLLLACPIFASLAKRANPFRL 119

[Close]

BLAST of CmaCh19G005040 vs. NCBI nr
Match: gi|307136450|gb|ADN34255.1| (putative transporter [Cucumis melo subsp. melo])

HSP 1 Score: 147.5 bits (371), Expect = 1.9e-32
Identity = 71/99 (71.72%), Postives = 82/99 (82.83%), Query Frame = 1


Query: 6   SSDVSSNQSWFTPLRLLVLFCVIHLINYMDRGVISSNGVNGIPKTCGAHGMCTSGSGIQG 65
           S + +SN SWFTPLRLL++FCVIHLINYMDRG ++SNGVNG    C A G CT+GSGIQG
Sbjct: 21  SVNEASNPSWFTPLRLLIIFCVIHLINYMDRGAMASNGVNGHRTICTADGTCTAGSGIQG 80

Query: 66  QFKLTNFEDGILSSAFMVGLLLACPIFASLSKSLRPLSM 105
           QF L+NFEDG+LSSAFMVGLLLACPIFASL+K   P  +
Sbjct: 81  QFNLSNFEDGVLSSAFMVGLLLACPIFASLAKRANPFRL 119

[Close]

BLAST of CmaCh19G005040 vs. NCBI nr
Match: gi|778724666|ref|XP_011658845.1| (PREDICTED: probable sphingolipid transporter spinster homolog 2 [Cucumis sativus])

HSP 1 Score: 144.8 bits (364), Expect = 1.2e-31
Identity = 73/111 (65.77%), Postives = 87/111 (78.38%), Query Frame = 1


Query: 6   SSDVSSNQSWFTPLRLLVLFCVIHLINYMDRGVISSNGVNGIPKTCGAHGMCTSGSGIQG 65
           S + +SN SWFTPLRLL++FCVIHLINYMDRG ++SNGVNG    C   G CT GSGIQG
Sbjct: 21  SVNEASNPSWFTPLRLLIIFCVIHLINYMDRGAMASNGVNGHRTICTPDGTCTPGSGIQG 80

Query: 66  QFKLTNFEDGILSSAFMVGLLLACPIFASLSKSLRP-----LSMAMSTVAI 112
           QF L+NFEDG+LSSAFMVGLLLACPIFASL+K   P     + +++ TVA+
Sbjct: 81  QFNLSNFEDGVLSSAFMVGLLLACPIFASLAKRANPFRLIGVGLSVWTVAV 131

[Close]

BLAST of CmaCh19G005040 vs. NCBI nr
Match: gi|255576025|ref|XP_002528908.1| (PREDICTED: probable sphingolipid transporter spinster homolog 2 isoform X2 [Ricinus communis])

HSP 1 Score: 141.7 bits (356), Expect = 1.1e-30
Identity = 69/104 (66.35%), Postives = 85/104 (81.73%), Query Frame = 1


Query: 1   MATSASSDVSSNQSWFTPLRLLVLFCVIHLINYMDRGVISSNGVNGIPKTCGAHGMCTSG 60
           MA ++++D SS+ SWFTP RLL+LFCVI++INY+DRG I+SNGVNG  +TC   G+C SG
Sbjct: 1   MARTSTNDSSSDPSWFTPKRLLMLFCVINMINYVDRGAIASNGVNGSIRTCDEKGICNSG 60

Query: 61  SGIQGQFKLTNFEDGILSSAFMVGLLLACPIFASLSKSLRPLSM 105
           SGIQG F L NF+DG+LSSAFMVGLLLA PIFASL+KS  P  +
Sbjct: 61  SGIQGDFNLNNFQDGVLSSAFMVGLLLASPIFASLAKSHNPFRL 104

[Close]

BLAST of CmaCh19G005040 vs. NCBI nr
Match: gi|1000947171|ref|XP_015580689.1| (PREDICTED: probable sphingolipid transporter spinster homolog 2 isoform X1 [Ricinus communis])

HSP 1 Score: 141.7 bits (356), Expect = 1.1e-30
Identity = 69/104 (66.35%), Postives = 85/104 (81.73%), Query Frame = 1


Query: 1   MATSASSDVSSNQSWFTPLRLLVLFCVIHLINYMDRGVISSNGVNGIPKTCGAHGMCTSG 60
           MA ++++D SS+ SWFTP RLL+LFCVI++INY+DRG I+SNGVNG  +TC   G+C SG
Sbjct: 1   MARTSTNDSSSDPSWFTPKRLLMLFCVINMINYVDRGAIASNGVNGSIRTCDEKGICNSG 60

Query: 61  SGIQGQFKLTNFEDGILSSAFMVGLLLACPIFASLSKSLRPLSM 105
           SGIQG F L NF+DG+LSSAFMVGLLLA PIFASL+KS  P  +
Sbjct: 61  SGIQGDFNLNNFQDGVLSSAFMVGLLLASPIFASLAKSHNPFRL 104

The following BLAST results are available for this feature:

BLAST of CmaCh19G005040 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SPNS2_ARATH	8.9e-30	63.92	Probable sphingolipid transporter spinster homolog 2 OS=Arabidopsis thaliana GN=...	[more]
SPNS1_ARATH	4.1e-27	60.00	Probable sphingolipid transporter spinster homolog 1 OS=Arabidopsis thaliana GN=...	[more]
SPNS3_ARATH	7.1e-27	53.15	Probable sphingolipid transporter spinster homolog 3 OS=Arabidopsis thaliana GN=...	[more]

BLAST of CmaCh19G005040 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GCQ6_CUCME	1.3e-32	71.72	Putative transporter OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0K295_CUCSA	8.7e-32	65.77	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067500 PE=4 SV=1	[more]
B9SSD9_RICCO	7.4e-31	66.35	Transporter, putative OS=Ricinus communis GN=RCOM_0188460 PE=4 SV=1	[more]
U5G3T4_POPTR	2.1e-30	62.07	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s08460g PE=4 SV=1	[more]
B9HN62_POPTR	2.1e-30	62.07	Transporter-related family protein OS=Populus trichocarpa GN=POPTR_0009s08460g P...	[more]

BLAST of CmaCh19G005040 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G64500.1	5.0e-31	63.92	Major facilitator superfamily protein	[more]
AT5G65687.1	2.3e-28	60.00	Major facilitator superfamily protein	[more]
AT2G22730.1	4.0e-28	53.15	Major facilitator superfamily protein	[more]

BLAST of CmaCh19G005040 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110202\|ref\|XP_008455103.1\|	1.9e-32	71.72	PREDICTED: probable sphingolipid transporter spinster homolog 2 isoform X1 [Cucu...	[more]
gi\|307136450\|gb\|ADN34255.1\|	1.9e-32	71.72	putative transporter [Cucumis melo subsp. melo]	[more]
gi\|778724666\|ref\|XP_011658845.1\|	1.2e-31	65.77	PREDICTED: probable sphingolipid transporter spinster homolog 2 [Cucumis sativus...	[more]
gi\|255576025\|ref\|XP_002528908.1\|	1.1e-30	66.35	PREDICTED: probable sphingolipid transporter spinster homolog 2 isoform X2 [Rici...	[more]
gi\|1000947171\|ref\|XP_015580689.1\|	1.1e-30	66.35	PREDICTED: probable sphingolipid transporter spinster homolog 2 isoform X1 [Rici...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR020846	MFS_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G005040.1	CmaCh19G005040.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020846	Major facilitator superfamily domain	unknown	SSF103473	MFS general substrate transporter	coord: 12..111 score: 6.1
None	No IPR available	GENE3D	G3DSA:1.20.1250.20		coord: 20..108 score: 4.
None	No IPR available	PANTHER	PTHR23505	FAMILY NOT NAMED	coord: 10..104 score: 7.4
None	No IPR available	PANTHER	PTHR23505:SF17	SUBFAMILY NOT NAMED	coord: 10..104 score: 7.4

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh19G005040	Silver-seed gourd	carcmaB0528
CmaCh19G005040	Silver-seed gourd	carcmaB0632
CmaCh19G005040	Silver-seed gourd	carcmaB1026
CmaCh19G005040	Cucumber (Chinese Long) v3	cmacucB0639
CmaCh19G005040	Cucumber (Chinese Long) v3	cmacucB0645
CmaCh19G005040	Watermelon (97103) v2	cmawmbB524
CmaCh19G005040	Watermelon (97103) v2	cmawmbB555
CmaCh19G005040	Wax gourd	cmawgoB0634
CmaCh19G005040	Wax gourd	cmawgoB0642
CmaCh19G005040	Cucurbita maxima (Rimu)	cmacmaB149
CmaCh19G005040	Cucumber (Gy14) v1	cgycmaB0624
CmaCh19G005040	Cucumber (Gy14) v1	cgycmaB0627
CmaCh19G005040	Cucurbita moschata (Rifu)	cmacmoB494
CmaCh19G005040	Cucurbita moschata (Rifu)	cmacmoB508
CmaCh19G005040	Cucurbita moschata (Rifu)	cmacmoB530
CmaCh19G005040	Wild cucumber (PI 183967)	cmacpiB534
CmaCh19G005040	Wild cucumber (PI 183967)	cmacpiB541
CmaCh19G005040	Cucumber (Chinese Long) v2	cmacuB528
CmaCh19G005040	Cucumber (Chinese Long) v2	cmacuB534
CmaCh19G005040	Melon (DHL92) v3.5.1	cmameB458
CmaCh19G005040	Melon (DHL92) v3.5.1	cmameB463
CmaCh19G005040	Watermelon (Charleston Gray)	cmawcgB447
CmaCh19G005040	Watermelon (97103) v1	cmawmB478
CmaCh19G005040	Cucurbita pepo (Zucchini)	cmacpeB522
CmaCh19G005040	Cucurbita pepo (Zucchini)	cmacpeB539
CmaCh19G005040	Bottle gourd (USVL1VR-Ls)	cmalsiB483
CmaCh19G005040	Bottle gourd (USVL1VR-Ls)	cmalsiB484
CmaCh19G005040	Cucumber (Gy14) v2	cgybcmaB945
CmaCh19G005040	Cucumber (Gy14) v2	cgybcmaB952
CmaCh19G005040	Melon (DHL92) v3.6.1	cmamedB531
CmaCh19G005040	Melon (DHL92) v3.6.1	cmamedB535
CmaCh19G005040	Melon (DHL92) v3.6.1	cmamedB562