CmaCh19G004280 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh19G004280
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Maturase K
Location	Cma_Chr19 : 5215110 .. 5215702 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAATTTCAAGGATATTTAGAACTTCAGAAATCTCGGCAACGTGACTTCCTATACCCACTTATCTTTCGGGAGTATATTTATGCATTTTCTCATGATCATTTTTTAAATGGATCCATTTTTTTGGAAAATTCTGGTTATGACAAAAAATCCAGTTTACTAATGGTAAAACATTTAATTACTCGAATGTATCACCAGAATCATTTTTTTTTTCCACTAATTATGACAAAAATCCATTTTTGGGGTACAAAAAAAATTTGTATTCTCAAATGCTATCCGAAGGGTTTGCAGTCATTGTGGAAATTCCATTTTCCCTAAGATTAGTATCTTCCTTAGAGGAAGAAGAAATCGCAAAATCTTATAATTTACGATCAAGTCATTCAATATTTCCTTTTTTAGAGGATAAATTACCACATTTAAATTATGTGTCAGATGTATTAATCCCCTATCCCCTTCATCTGGAAATTTTAGTTCAAATCCTTCGCTCCTGGGTGAAAGATGCCTCTTCTTTTCATTTATTACGGTTCTTTTTTCACGAGTATTGTAATTGGAATAGTCTTAGTACTTCAAAAAAATTGATTTCTTTTTGA

mRNA sequence

ATGGAGGAATTTCAAGGATATTTAGAACTTCAGAAATCTCGGCAACGTGACTTCCTATACCCACTTATCTTTCGGGAGTATATTTATGCATTTTCTCATGATCATTTTTTAAATGGATCCATTTTTTTGGAAAATTCTGAATCATTTTTTTTTTCCACTAATTATGACAAAAATCCATTTTTGGGGTACAAAAAAAATTTGTATTCTCAAATGCTATCCGAAGGGTTTGCAGTCATTGTGGAAATTCCATTTTCCCTAAGATTAGTATCTTCCTTAGAGGAAGAAGAAATCGCAAAATCTTATAATTTACGATCAAGTCATTCAATATTTCCTTTTTTAGAGGATAAATTACCACATTTAAATTATGTGTCAGATGTATTAATCCCCTATCCCCTTCATCTGGAAATTTTAGTTCAAATCCTTCGCTCCTGGGTGAAAGATGCCTCTTCTTTTCATTTATTACGGTTCTTTTTTCACGAGTATTGTAATTGGAATAGTCTTAGTACTTCAAAAAAATTGATTTCTTTTTGA

Coding sequence (CDS)

ATGGAGGAATTTCAAGGATATTTAGAACTTCAGAAATCTCGGCAACGTGACTTCCTATACCCACTTATCTTTCGGGAGTATATTTATGCATTTTCTCATGATCATTTTTTAAATGGATCCATTTTTTTGGAAAATTCTGAATCATTTTTTTTTTCCACTAATTATGACAAAAATCCATTTTTGGGGTACAAAAAAAATTTGTATTCTCAAATGCTATCCGAAGGGTTTGCAGTCATTGTGGAAATTCCATTTTCCCTAAGATTAGTATCTTCCTTAGAGGAAGAAGAAATCGCAAAATCTTATAATTTACGATCAAGTCATTCAATATTTCCTTTTTTAGAGGATAAATTACCACATTTAAATTATGTGTCAGATGTATTAATCCCCTATCCCCTTCATCTGGAAATTTTAGTTCAAATCCTTCGCTCCTGGGTGAAAGATGCCTCTTCTTTTCATTTATTACGGTTCTTTTTTCACGAGTATTGTAATTGGAATAGTCTTAGTACTTCAAAAAAATTGATTTCTTTTTGA

Protein sequence

MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENSESFFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAKSYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFHEYCNWNSLSTSKKLISF

Homology

[Close]

BLAST of CmaCh19G004280 vs. Swiss-Prot
Match: MATK_CUCSA (Maturase K OS=Cucumis sativus GN=matK PE=3 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 4.6e-83
Identity = 162/198 (81.82%), Postives = 165/198 (83.33%), Query Frame = 1


Query: 1   MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENS-------------- 60
           MEEFQGYLEL+KSRQRDFLYPLIFREYIYAFSHDHFLNGSI LENS              
Sbjct: 1   MEEFQGYLELEKSRQRDFLYPLIFREYIYAFSHDHFLNGSILLENSGYDKKSSLLMVKHL 60

Query: 61  --------ESFFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIA 120
                     FFF+  Y+KNPF GY  NLYSQMLSEGFAVIVEIP SLRLVSSLEEEEIA
Sbjct: 61  ITRMYHQNHFFFFTNYYNKNPFWGYNNNLYSQMLSEGFAVIVEIPLSLRLVSSLEEEEIA 120

Query: 121 KSYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFF 177
           KSYNLRSSHSIFPFLEDK PHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFF
Sbjct: 121 KSYNLRSSHSIFPFLEDKFPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFF 180

[Close]

BLAST of CmaCh19G004280 vs. Swiss-Prot
Match: MATK_CRAMN (Maturase K OS=Crataegus monogyna GN=matK PE=3 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.5e-65
Identity = 132/196 (67.35%), Postives = 144/196 (73.47%), Query Frame = 1


Query: 1   MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLEN--------------- 60
           MEEFQGYLEL + +Q DFLYPLIFREYIYA +HDH LN SI L+N               
Sbjct: 1   MEEFQGYLELDRYQQHDFLYPLIFREYIYALAHDHGLNRSILLDNVGYDTKYSLLIIKRL 60

Query: 61  -------SESFFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIA 120
                  +     + + ++N F GY KNLYSQM+SEGFAVIVEIPFSLRLVSSLE  EI 
Sbjct: 61  ISRMYQQNHLIISANDSNQNQFFGYNKNLYSQMMSEGFAVIVEIPFSLRLVSSLEATEIV 120

Query: 121 KSYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFF 175
           KSYNLRS HSIFPFLEDK PHLNYVSDVLIPYP+HLEILVQ LR WVKD SS HLLRFF 
Sbjct: 121 KSYNLRSIHSIFPFLEDKFPHLNYVSDVLIPYPIHLEILVQTLRYWVKDPSSLHLLRFFL 180

[Close]

BLAST of CmaCh19G004280 vs. Swiss-Prot
Match: MATK_HAMVI (Maturase K OS=Hamamelis virginiana GN=matK PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 9.6e-65
Identity = 135/197 (68.53%), Postives = 150/197 (76.14%), Query Frame = 1


Query: 1   MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLEN------SESFF---- 60
           MEEFQGYLEL KSRQ DFLYPLIF+EYIYA +HDH LN SI LEN      S S      
Sbjct: 1   MEEFQGYLELDKSRQHDFLYPLIFQEYIYALAHDHGLNRSILLENVGYDNKSSSLIVKRL 60

Query: 61  ----FSTNY--------DKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIA 120
               +  N+        ++NPFLG+ KNLYSQM+SEGFAVIVEIPFSLR VSSLE +EI 
Sbjct: 61  ITRMYQQNHLIISVNDSNQNPFLGHNKNLYSQMISEGFAVIVEIPFSLRSVSSLEGKEIV 120

Query: 121 KSYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFF 176
           +S+NLRS HSIFPFLEDK  HLNYVSD+LIP+P+HLEILVQ LR WVKDASS HLLRFFF
Sbjct: 121 QSHNLRSIHSIFPFLEDKFLHLNYVSDILIPHPIHLEILVQTLRYWVKDASSLHLLRFFF 180

[Close]

BLAST of CmaCh19G004280 vs. Swiss-Prot
Match: MATK_HAMJA (Maturase K OS=Hamamelis japonica GN=matK PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 9.6e-65
Identity = 135/197 (68.53%), Postives = 150/197 (76.14%), Query Frame = 1


Query: 1   MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLEN------SESFF---- 60
           MEEFQGYLEL KSRQ DFLYPLIF+EYIYA +HDH LN SI LEN      S S      
Sbjct: 1   MEEFQGYLELDKSRQHDFLYPLIFQEYIYALAHDHGLNRSILLENVGYDNKSSSLIVKRL 60

Query: 61  ----FSTNY--------DKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIA 120
               +  N+        ++NPFLG+ KNLYSQM+SEGFAVIVEIPFSLR VSSLE +EI 
Sbjct: 61  ITRMYQQNHLIISVNDSNQNPFLGHNKNLYSQMISEGFAVIVEIPFSLRSVSSLEGKEIV 120

Query: 121 KSYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFF 176
           +S+NLRS HSIFPFLEDK  HLNYVSD+LIP+P+HLEILVQ LR WVKDASS HLLRFFF
Sbjct: 121 QSHNLRSIHSIFPFLEDKFLHLNYVSDILIPHPIHLEILVQTLRYWVKDASSLHLLRFFF 180

[Close]

BLAST of CmaCh19G004280 vs. Swiss-Prot
Match: MATK_MALDO (Maturase K OS=Malus domestica GN=matK PE=3 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 2.8e-64
Identity = 130/196 (66.33%), Postives = 142/196 (72.45%), Query Frame = 1


Query: 1   MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLEN--------------- 60
           MEEFQGYLEL + +Q DFLYPLIFREYIYA +HDH LN SI L+N               
Sbjct: 1   MEEFQGYLELDRYQQHDFLYPLIFREYIYALAHDHGLNRSILLDNVGYDTKYSLLIIKRL 60

Query: 61  -------SESFFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIA 120
                  +     + + ++N F GY KNLYSQM+SEGFAVIVEIPFS RLVSSLE  EI 
Sbjct: 61  ISRMYQQNHLIISANDSNQNKFFGYNKNLYSQMMSEGFAVIVEIPFSRRLVSSLEATEIV 120

Query: 121 KSYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFF 175
           KSYNLRS HSIFPFLEDK PHLNYVSDVLIPYP+HLEILVQ LR WVKD SS HLLR F 
Sbjct: 121 KSYNLRSIHSIFPFLEDKFPHLNYVSDVLIPYPIHLEILVQTLRYWVKDPSSLHLLRLFL 180

[Close]

BLAST of CmaCh19G004280 vs. TrEMBL
Match: A0A0S2IE04_9ROSI (Maturase K OS=Cucurbita argyrosperma subsp. sororia GN=matK PE=3 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 3.0e-89
Identity = 174/197 (88.32%), Postives = 174/197 (88.32%), Query Frame = 1


Query: 1   MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENS-------------- 60
           MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENS              
Sbjct: 1   MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENSGYDKKSSLLMVKHL 60

Query: 61  -------ESFFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK 120
                    FFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK
Sbjct: 61  ITRMYHQNHFFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK 120

Query: 121 SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH 177
           SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH
Sbjct: 121 SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH 180

[Close]

BLAST of CmaCh19G004280 vs. TrEMBL
Match: A0A0S2IGE8_CUCMO (Maturase K OS=Cucurbita moschata GN=matK PE=3 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 3.0e-89
Identity = 174/197 (88.32%), Postives = 174/197 (88.32%), Query Frame = 1


Query: 1   MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENS-------------- 60
           MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENS              
Sbjct: 1   MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENSGYDKKSSLLMVKHL 60

Query: 61  -------ESFFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK 120
                    FFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK
Sbjct: 61  ITRMYHQNHFFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK 120

Query: 121 SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH 177
           SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH
Sbjct: 121 SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH 180

[Close]

BLAST of CmaCh19G004280 vs. TrEMBL
Match: A0A0S2IG69_CUCPE (Maturase K OS=Cucurbita pepo subsp. ovifera GN=matK PE=3 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 3.0e-89
Identity = 174/197 (88.32%), Postives = 174/197 (88.32%), Query Frame = 1


Query: 1   MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENS-------------- 60
           MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENS              
Sbjct: 1   MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENSGYDKKSSLLMVKHL 60

Query: 61  -------ESFFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK 120
                    FFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK
Sbjct: 61  ITRMYHQNHFFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK 120

Query: 121 SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH 177
           SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH
Sbjct: 121 SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH 180

[Close]

BLAST of CmaCh19G004280 vs. TrEMBL
Match: A0A0S2IET2_9ROSI (Maturase K OS=Cucurbita argyrosperma GN=matK PE=3 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 3.0e-89
Identity = 174/197 (88.32%), Postives = 174/197 (88.32%), Query Frame = 1


Query: 1   MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENS-------------- 60
           MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENS              
Sbjct: 1   MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENSGYDKKSSLLMVKHL 60

Query: 61  -------ESFFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK 120
                    FFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK
Sbjct: 61  ITRMYHQNHFFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK 120

Query: 121 SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH 177
           SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH
Sbjct: 121 SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH 180

[Close]

BLAST of CmaCh19G004280 vs. TrEMBL
Match: A0A0S2IFS6_9ROSI (Maturase K OS=Cucurbita andreana GN=matK PE=3 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 3.0e-89
Identity = 174/197 (88.32%), Postives = 174/197 (88.32%), Query Frame = 1


Query: 1   MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENS-------------- 60
           MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENS              
Sbjct: 1   MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENSGYDKKSSLLMVKHL 60

Query: 61  -------ESFFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK 120
                    FFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK
Sbjct: 61  ITRMYHQNHFFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK 120

Query: 121 SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH 177
           SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH
Sbjct: 121 SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH 180

[Close]

BLAST of CmaCh19G004280 vs. TAIR10
Match: ATCG00040.1 (ATCG00040.1 maturase K)

HSP 1 Score: 187.6 bits (475), Expect = 6.7e-48
Identity = 106/201 (52.74%), Postives = 128/201 (63.68%), Query Frame = 1


Query: 1   MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGS-----IFLENSES------- 60
           M++FQGYLE   +RQ+ FLYPL FREYIY  ++DH LN       IFLEN++        
Sbjct: 23  MDKFQGYLEFDGARQQSFLYPLFFREYIYVLAYDHGLNRLNRNRYIFLENADYDKKYSSL 82

Query: 61  ---------------FFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLE 120
                             + + ++N FLG+    Y QM+S  FAVIVEIPFSLRL SS +
Sbjct: 83  ITKRLILRMYEQNRLIIPTKDVNQNSFLGHTSLFYYQMISVLFAVIVEIPFSLRLGSSFQ 142

Query: 121 EEEIAKSYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHL 175
            +++ KSYNL+S HSIFPFLEDKL H NYV DVLIPYP+HLEILVQ LR  VKDASS H 
Sbjct: 143 GKQLKKSYNLQSIHSIFPFLEDKLGHFNYVLDVLIPYPIHLEILVQTLRYRVKDASSLHF 202

[Close]

BLAST of CmaCh19G004280 vs. NCBI nr
Match: gi|952955199|gb|ALO22550.1| (maturase K (plastid) [Cucurbita pepo subsp. fraterna])

HSP 1 Score: 335.9 bits (860), Expect = 4.3e-89
Identity = 174/197 (88.32%), Postives = 174/197 (88.32%), Query Frame = 1


Query: 1   MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENS-------------- 60
           MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENS              
Sbjct: 1   MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENSGYDKKSSLLMVKHL 60

Query: 61  -------ESFFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK 120
                    FFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK
Sbjct: 61  ITRMYHQNHFFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK 120

Query: 121 SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH 177
           SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH
Sbjct: 121 SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH 180

[Close]

BLAST of CmaCh19G004280 vs. NCBI nr
Match: gi|952954361|gb|ALO21725.1| (maturase K (plastid) [Cucurbita argyrosperma])

HSP 1 Score: 335.9 bits (860), Expect = 4.3e-89
Identity = 174/197 (88.32%), Postives = 174/197 (88.32%), Query Frame = 1


Query: 1   MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENS-------------- 60
           MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENS              
Sbjct: 1   MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENSGYDKKSSLLMVKHL 60

Query: 61  -------ESFFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK 120
                    FFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK
Sbjct: 61  ITRMYHQNHFFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK 120

Query: 121 SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH 177
           SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH
Sbjct: 121 SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH 180

[Close]

BLAST of CmaCh19G004280 vs. NCBI nr
Match: gi|952954945|gb|ALO22300.1| (maturase K (plastid) [Cucurbita andreana])

HSP 1 Score: 335.9 bits (860), Expect = 4.3e-89
Identity = 174/197 (88.32%), Postives = 174/197 (88.32%), Query Frame = 1


Query: 1   MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENS-------------- 60
           MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENS              
Sbjct: 1   MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENSGYDKKSSLLMVKHL 60

Query: 61  -------ESFFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK 120
                    FFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK
Sbjct: 61  ITRMYHQNHFFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK 120

Query: 121 SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH 177
           SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH
Sbjct: 121 SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH 180

[Close]

BLAST of CmaCh19G004280 vs. NCBI nr
Match: gi|952954718|gb|ALO22077.1| (maturase K (plastid) [Cucurbita ecuadorensis])

HSP 1 Score: 335.9 bits (860), Expect = 4.3e-89
Identity = 174/197 (88.32%), Postives = 174/197 (88.32%), Query Frame = 1


Query: 1   MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENS-------------- 60
           MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENS              
Sbjct: 1   MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENSGYDKKSSLLMVKHL 60

Query: 61  -------ESFFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK 120
                    FFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK
Sbjct: 61  ITRMYHQNHFFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK 120

Query: 121 SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH 177
           SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH
Sbjct: 121 SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH 180

[Close]

BLAST of CmaCh19G004280 vs. NCBI nr
Match: gi|952954479|gb|ALO21841.1| (maturase K (plastid) [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 335.9 bits (860), Expect = 4.3e-89
Identity = 174/197 (88.32%), Postives = 174/197 (88.32%), Query Frame = 1


Query: 1   MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENS-------------- 60
           MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENS              
Sbjct: 1   MEEFQGYLELQKSRQRDFLYPLIFREYIYAFSHDHFLNGSIFLENSGYDKKSSLLMVKHL 60

Query: 61  -------ESFFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK 120
                    FFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK
Sbjct: 61  ITRMYHQNHFFFSTNYDKNPFLGYKKNLYSQMLSEGFAVIVEIPFSLRLVSSLEEEEIAK 120

Query: 121 SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH 177
           SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH
Sbjct: 121 SYNLRSSHSIFPFLEDKLPHLNYVSDVLIPYPLHLEILVQILRSWVKDASSFHLLRFFFH 180

The following BLAST results are available for this feature:

BLAST of CmaCh19G004280 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MATK_CUCSA	4.6e-83	81.82	Maturase K OS=Cucumis sativus GN=matK PE=3 SV=1	[more]
MATK_CRAMN	1.5e-65	67.35	Maturase K OS=Crataegus monogyna GN=matK PE=3 SV=1	[more]
MATK_HAMVI	9.6e-65	68.53	Maturase K OS=Hamamelis virginiana GN=matK PE=3 SV=1	[more]
MATK_HAMJA	9.6e-65	68.53	Maturase K OS=Hamamelis japonica GN=matK PE=3 SV=1	[more]
MATK_MALDO	2.8e-64	66.33	Maturase K OS=Malus domestica GN=matK PE=3 SV=1	[more]

BLAST of CmaCh19G004280 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0S2IE04_9ROSI	3.0e-89	88.32	Maturase K OS=Cucurbita argyrosperma subsp. sororia GN=matK PE=3 SV=1	[more]
A0A0S2IGE8_CUCMO	3.0e-89	88.32	Maturase K OS=Cucurbita moschata GN=matK PE=3 SV=1	[more]
A0A0S2IG69_CUCPE	3.0e-89	88.32	Maturase K OS=Cucurbita pepo subsp. ovifera GN=matK PE=3 SV=1	[more]
A0A0S2IET2_9ROSI	3.0e-89	88.32	Maturase K OS=Cucurbita argyrosperma GN=matK PE=3 SV=1	[more]
A0A0S2IFS6_9ROSI	3.0e-89	88.32	Maturase K OS=Cucurbita andreana GN=matK PE=3 SV=1	[more]

BLAST of CmaCh19G004280 vs. TAIR10


Match Name	E-value	Identity	Description
ATCG00040.1	6.7e-48	52.74	ATCG00040.1 maturase K	[more]

BLAST of CmaCh19G004280 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|952955199\|gb\|ALO22550.1\|	4.3e-89	88.32	maturase K (plastid) [Cucurbita pepo subsp. fraterna]	[more]
gi\|952954361\|gb\|ALO21725.1\|	4.3e-89	88.32	maturase K (plastid) [Cucurbita argyrosperma]	[more]
gi\|952954945\|gb\|ALO22300.1\|	4.3e-89	88.32	maturase K (plastid) [Cucurbita andreana]	[more]
gi\|952954718\|gb\|ALO22077.1\|	4.3e-89	88.32	maturase K (plastid) [Cucurbita ecuadorensis]	[more]
gi\|952954479\|gb\|ALO21841.1\|	4.3e-89	88.32	maturase K (plastid) [Cucurbita argyrosperma subsp. sororia]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR024942	Maturase_MatK_N

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
biological_process	GO:0008380	RNA splicing
biological_process	GO:0008033	tRNA processing
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G004280.1	CmaCh19G004280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024942	Maturase MatK, N-terminal domain	PFAM	PF01824	MatK_N	coord: 52..176 score: 3.2E-63coord: 1..47 score: 1.7
None	No IPR available	PANTHER	PTHR34811	FAMILY NOT NAMED	coord: 2..176 score: 1.9
None	No IPR available	PANTHER	PTHR34811:SF1	MATURASE K	coord: 2..176 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh19G004280	Cucurbita pepo (Zucchini)	cmacpeB522
CmaCh19G004280	Bottle gourd (USVL1VR-Ls)	cmalsiB488
CmaCh19G004280	Cucumber (Gy14) v2	cgybcmaB385
CmaCh19G004280	Melon (DHL92) v3.6.1	cmamedB544
CmaCh19G004280	Silver-seed gourd	carcmaB0294
CmaCh19G004280	Cucumber (Chinese Long) v3	cmacucB0625
CmaCh19G004280	Cucurbita maxima (Rimu)	cmacmaB149
CmaCh19G004280	Cucumber (Gy14) v1	cgycmaB0869
CmaCh19G004280	Cucurbita moschata (Rifu)	cmacmoB508
CmaCh19G004280	Cucumber (Chinese Long) v2	cmacuB517
CmaCh19G004280	Melon (DHL92) v3.5.1	cmameB469