CmaCh19G004190 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh19G004190
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Proteinase inhibitor 1
Location	Cma_Chr19 : 5056669 .. 5057194 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATATCAACTTTAAAATGACGTCTCTACGTAAGTATATCTTTTGGTAATGTTTTCTTAGGTTCTTCCTTTATTAATATACTTTTGGTCTTTACCTAATGCATTCTTTTTTTTTTTTTGAATGATTCAGTAAAATCATGGCCAGAACTAAATTTCATGCAGGCTAGCATGGTAGAAAATATTATAAAGAAGCAACATCCTGAATTTCAGATAGTGGTATTGTTAGCAGGAAGTCCAGTAACCAAAGATCTTAGACAGGGACGAGTTCGACTGTTTATAAATGTAGCTGGTTTTGTGGTTCAAATTCCTCACGAGGGCTAAAATGTCTTAAATATATATGTTTAAGATCATACCTAAATAAAGAATAATATTTCCACTACTAAACATATTTGTAGCTTGAGCACTAGATGGTTTATTAGTTTCTAAATTAATATTGATTTTGAGACAATAAAATATGCGAACATAAATTAATAATATATTCTATTTATAATAATTGTATCAATTCACTCTCACCTTATGATTTGTTG

mRNA sequence

AGATATCAACTTTAAAATGACGTCTCTACTAAAATCATGGCCAGAACTAAATTTCATGCAGGCTAGCATGGTAGAAAATATTATAAAGAAGCAACATCCTGAATTTCAGATAGTGGTATTGTTAGCAGGAAGTCCAGTAACCAAAGATCTTAGACAGGGACGAGTTCGACTGTTTATAAATGTAGCTGGTTTTGTGGTTCAAATTCCTCACGAGGGCTAAAATGTCTTAAATATATATGTTTAAGATCATACCTAAATAAAGAATAATATTTCCACTACTAAACATATTTGTAGCTTGAGCACTAGATGGTTTATTAGTTTCTAAATTAATATTGATTTTGAGACAATAAAATATGCGAACATAAATTAATAATATATTCTATTTATAATAATTGTATCAATTCACTCTCACCTTATGATTTGTTG

Coding sequence (CDS)

ATGACGTCTCTACTAAAATCATGGCCAGAACTAAATTTCATGCAGGCTAGCATGGTAGAAAATATTATAAAGAAGCAACATCCTGAATTTCAGATAGTGGTATTGTTAGCAGGAAGTCCAGTAACCAAAGATCTTAGACAGGGACGAGTTCGACTGTTTATAAATGTAGCTGGTTTTGTGGTTCAAATTCCTCACGAGGGCTAA

Protein sequence

MTSLLKSWPELNFMQASMVENIIKKQHPEFQIVVLLAGSPVTKDLRQGRVRLFINVAGFVVQIPHEG

Homology

[Close]

BLAST of CmaCh19G004190 vs. Swiss-Prot
Match: ICI1_SOLPE (Wound-induced proteinase inhibitor 1 OS=Solanum peruvianum PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 4.9e-09
Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 1


Query: 8   WPELNFMQASMVENIIKKQHPEF-QIVVLLAGSPVTKDLRQGRVRLFINVAGFVVQIP 65
           WPEL  + A   + II+K++P    I +LL GSPVTKD R  RVRLF+N+ G VVQIP
Sbjct: 51  WPELIGVPALYAKGIIEKENPSITNIPILLNGSPVTKDFRCDRVRLFVNILGDVVQIP 108

[Close]

BLAST of CmaCh19G004190 vs. Swiss-Prot
Match: ITR1_NICSY (Trypsin inhibitor 1 OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.9e-08
Identity = 31/63 (49.21%), Postives = 41/63 (65.08%), Query Frame = 1


Query: 6  KSWPELNFMQASMVENIIKKQHPEF-QIVVLLAGSPVTKDLRQGRVRLFINVAGFVVQIP 65
          ++WPEL  + A     II+K++ +   +  +L GSPVTKD R  RVRLF+NV  FVVQIP
Sbjct: 32 ETWPELIGVPAKFAREIIQKENSKLTNVPSVLNGSPVTKDFRCERVRLFVNVLDFVVQIP 91

Query: 66 HEG 68
            G
Sbjct: 92 RVG 94

[Close]

BLAST of CmaCh19G004190 vs. Swiss-Prot
Match: IPIB_TOBAC (Proteinase inhibitor I-B OS=Nicotiana tabacum GN=TIMPA PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.2e-08
Identity = 30/61 (49.18%), Postives = 39/61 (63.93%), Query Frame = 1


Query: 8   WPELNFMQASMVENIIKKQHPEF-QIVVLLAGSPVTKDLRQGRVRLFINVAGFVVQIPHE 67
           WPEL    A     II+K++P+   +  +L G+PVT+DLR  RVRLF+NV  FVVQ P  
Sbjct: 47  WPELLGTPAKFAMQIIQKENPKLTNVQTVLNGTPVTEDLRCNRVRLFVNVLDFVVQTPQV 106

[Close]

BLAST of CmaCh19G004190 vs. Swiss-Prot
Match: IPIA_TOBAC (Proteinase inhibitor I-A OS=Nicotiana tabacum GN=TIMPB PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 5.4e-08
Identity = 29/61 (47.54%), Postives = 38/61 (62.30%), Query Frame = 1


Query: 8   WPELNFMQASMVENIIKKQHPEF-QIVVLLAGSPVTKDLRQGRVRLFINVAGFVVQIPHE 67
           WPEL    A     II+K++P+   +  +L G PVT+DLR  RVRLF+NV  F+VQ P  
Sbjct: 47  WPELLGTPAKFAMQIIQKENPKLTNVQTILNGGPVTEDLRCNRVRLFVNVLDFIVQTPQI 106

[Close]

BLAST of CmaCh19G004190 vs. Swiss-Prot
Match: ITH5_CUCMA (Inhibitor of trypsin and hageman factor OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 9.2e-08
Identity = 27/61 (44.26%), Postives = 39/61 (63.93%), Query Frame = 1


Query: 7  SWPELNFMQASMVENIIKKQHPEFQIVVLLAGSPVTKDLRQGRVRLFINVAGFVVQIPHE 66
          SWP L  +  S+ + II++Q+P  + V+L  G+PVTKD R  RVR+++N  G VV  P  
Sbjct: 8  SWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLVVSPPRI 67

Query: 67 G 68
          G
Sbjct: 68 G 68

[Close]

BLAST of CmaCh19G004190 vs. TrEMBL
Match: A0A0A0LIF6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G914570 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 4.9e-16
Identity = 43/63 (68.25%), Postives = 50/63 (79.37%), Query Frame = 1


Query: 5  LKSWPELNFMQASMVENIIKKQHPEFQIVVLLAGSPVTKDLRQGRVRLFINVAGFVVQIP 64
          LKSWP LNFM A  V NIIKK++P+FQI +LLAGSPVTKDL+ GRVRLF N+   VV +P
Sbjct: 9  LKSWPALNFMDARTVANIIKKENPDFQIFILLAGSPVTKDLKHGRVRLFTNMEEIVVIVP 68

Query: 65 HEG 68
           EG
Sbjct: 69 QEG 71

[Close]

BLAST of CmaCh19G004190 vs. TrEMBL
Match: A0A0A0LFD4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G914580 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 3.1e-10
Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 1


Query: 5  LKSWPELNFMQASMVENIIKKQHPEFQIVVLLAGSPVTKDLRQGRVRLFINVAGFVVQIP 64
          LKSWP L F+ A  V N IK ++P F+IV +  G+PVTKD+  GRVRL ++  G VV +P
Sbjct: 7  LKSWPALKFLDAQTVANAIKTENPNFEIVTVPEGTPVTKDIIPGRVRLVVDANGKVVNVP 66

Query: 65 HEG 68
           EG
Sbjct: 67 QEG 69

[Close]

BLAST of CmaCh19G004190 vs. TrEMBL
Match: A0A0A0KPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G027950 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 3.4e-09
Identity = 31/61 (50.82%), Postives = 46/61 (75.41%), Query Frame = 1


Query: 7  SWPELNFMQASMVENIIKKQHPEFQIVVLLAGSPVTKDLRQGRVRLFINVAGFVVQIPHE 66
          SWPEL F+++S+  + I++  P+ + VVLLAGSPVT+DLR  RVR+F+N+   VV++P  
Sbjct: 15 SWPELVFVKSSVAVHWIERDRPDVKPVVLLAGSPVTEDLRPNRVRIFVNMNDRVVEVPRT 74

Query: 67 G 68
          G
Sbjct: 75 G 75

[Close]

BLAST of CmaCh19G004190 vs. TrEMBL
Match: K4CVX2_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.2e-07
Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 1


Query: 8   WPELNFMQASMVENIIKKQHPEF-QIVVLLAGSPVTKDLRQGRVRLFINVAGFVVQIP 65
           WPEL  + A   + II+K++P    I +LL GSPVTKD R  RVRLF+N+ G VVQIP
Sbjct: 51  WPELIGVPAQYAKGIIEKENPSIANIPILLNGSPVTKDFRCDRVRLFVNILGDVVQIP 108

[Close]

BLAST of CmaCh19G004190 vs. TrEMBL
Match: K4CVX3_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 7.1e-07
Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 1


Query: 8   WPELNFMQASMVENIIKKQHPEFQ-IVVLLAGSPVTKDLRQGRVRLFINVAGFVVQIP 65
           WPEL  + A + + II+K++P    I +LL GSPVT D R  RVRLF N+ G+VVQIP
Sbjct: 51  WPELIGVPAKLAKEIIEKENPSISDIPILLNGSPVTMDFRCDRVRLFDNILGYVVQIP 108

[Close]

BLAST of CmaCh19G004190 vs. TAIR10
Match: AT2G38870.1 (AT2G38870.1 Serine protease inhibitor, potato inhibitor I-type family protein)

HSP 1 Score: 50.8 bits (120), Expect = 3.7e-07
Identity = 24/61 (39.34%), Postives = 34/61 (55.74%), Query Frame = 1


Query: 7  SWPELNFMQASMVENIIKKQHPEFQIVVLLAGSPVTKDLRQGRVRLFINVAGFVVQIPHE 66
          SWPEL          +I++++P     V+L GSPVT D R  RVR+F++    VV+ P  
Sbjct: 10 SWPELTGTNGDYAAVVIERENPTVNAAVILDGSPVTADFRCDRVRVFVDGNRIVVKTPKS 69

Query: 67 G 68
          G
Sbjct: 70 G 70

[Close]

BLAST of CmaCh19G004190 vs. NCBI nr
Match: gi|700205344|gb|KGN60477.1| (hypothetical protein Csa_3G914570 [Cucumis sativus])

HSP 1 Score: 91.3 bits (225), Expect = 7.0e-16
Identity = 43/63 (68.25%), Postives = 50/63 (79.37%), Query Frame = 1


Query: 5  LKSWPELNFMQASMVENIIKKQHPEFQIVVLLAGSPVTKDLRQGRVRLFINVAGFVVQIP 64
          LKSWP LNFM A  V NIIKK++P+FQI +LLAGSPVTKDL+ GRVRLF N+   VV +P
Sbjct: 9  LKSWPALNFMDARTVANIIKKENPDFQIFILLAGSPVTKDLKHGRVRLFTNMEEIVVIVP 68

Query: 65 HEG 68
           EG
Sbjct: 69 QEG 71

[Close]

BLAST of CmaCh19G004190 vs. NCBI nr
Match: gi|700205345|gb|KGN60478.1| (hypothetical protein Csa_3G914580 [Cucumis sativus])

HSP 1 Score: 72.0 bits (175), Expect = 4.4e-10
Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 1


Query: 5  LKSWPELNFMQASMVENIIKKQHPEFQIVVLLAGSPVTKDLRQGRVRLFINVAGFVVQIP 64
          LKSWP L F+ A  V N IK ++P F+IV +  G+PVTKD+  GRVRL ++  G VV +P
Sbjct: 7  LKSWPALKFLDAQTVANAIKTENPNFEIVTVPEGTPVTKDIIPGRVRLVVDANGKVVNVP 66

Query: 65 HEG 68
           EG
Sbjct: 67 QEG 69

[Close]

BLAST of CmaCh19G004190 vs. NCBI nr
Match: gi|778698123|ref|XP_011654473.1| (PREDICTED: inhibitor of trypsin and hageman factor-like [Cucumis sativus])

HSP 1 Score: 68.6 bits (166), Expect = 4.9e-09
Identity = 31/61 (50.82%), Postives = 46/61 (75.41%), Query Frame = 1


Query: 7  SWPELNFMQASMVENIIKKQHPEFQIVVLLAGSPVTKDLRQGRVRLFINVAGFVVQIPHE 66
          SWPEL F+++S+  + I++  P+ + VVLLAGSPVT+DLR  RVR+F+N+   VV++P  
Sbjct: 15 SWPELVFVKSSVAVHWIERDRPDVKPVVLLAGSPVTEDLRPNRVRIFVNMNDRVVEVPRT 74

Query: 67 G 68
          G
Sbjct: 75 G 75

[Close]

BLAST of CmaCh19G004190 vs. NCBI nr
Match: gi|697163113|ref|XP_009590374.1| (PREDICTED: trypsin inhibitor 1 [Nicotiana tomentosiformis])

HSP 1 Score: 62.8 bits (151), Expect = 2.7e-07
Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 1


Query: 6  KSWPELNFMQASMVENIIKKQHPEF-QIVVLLAGSPVTKDLRQGRVRLFINVAGFVVQIP 65
          ++WPEL  + A     II+K++P+   +  LL GSPVTKDLR  RVRLF+NV   VVQ+P
Sbjct: 32 ETWPELIGVPAKFAREIIQKENPKLTNVPSLLNGSPVTKDLRCNRVRLFVNVLDIVVQLP 91

Query: 66 HEG 68
            G
Sbjct: 92 RVG 94

[Close]

BLAST of CmaCh19G004190 vs. NCBI nr
Match: gi|460404371|ref|XP_004247656.1| (PREDICTED: wound-induced proteinase inhibitor 1 [Solanum lycopersicum])

HSP 1 Score: 62.0 bits (149), Expect = 4.6e-07
Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 1


Query: 8   WPELNFMQASMVENIIKKQHPEF-QIVVLLAGSPVTKDLRQGRVRLFINVAGFVVQIP 65
           WPEL  + A   + II+K++P    I +LL GSPVTKD R  RVRLF+N+ G VVQIP
Sbjct: 51  WPELIGVPAQYAKGIIEKENPSIANIPILLNGSPVTKDFRCDRVRLFVNILGDVVQIP 108

The following BLAST results are available for this feature:

BLAST of CmaCh19G004190 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ICI1_SOLPE	4.9e-09	55.17	Wound-induced proteinase inhibitor 1 OS=Solanum peruvianum PE=3 SV=1	[more]
ITR1_NICSY	1.9e-08	49.21	Trypsin inhibitor 1 OS=Nicotiana sylvestris PE=2 SV=1	[more]
IPIB_TOBAC	3.2e-08	49.18	Proteinase inhibitor I-B OS=Nicotiana tabacum GN=TIMPA PE=2 SV=1	[more]
IPIA_TOBAC	5.4e-08	47.54	Proteinase inhibitor I-A OS=Nicotiana tabacum GN=TIMPB PE=2 SV=1	[more]
ITH5_CUCMA	9.2e-08	44.26	Inhibitor of trypsin and hageman factor OS=Cucurbita maxima PE=1 SV=1	[more]

BLAST of CmaCh19G004190 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIF6_CUCSA	4.9e-16	68.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G914570 PE=4 SV=1	[more]
A0A0A0LFD4_CUCSA	3.1e-10	52.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G914580 PE=4 SV=1	[more]
A0A0A0KPI0_CUCSA	3.4e-09	50.82	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G027950 PE=4 SV=1	[more]
K4CVX2_SOLLC	3.2e-07	55.17	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
K4CVX3_SOLLC	7.1e-07	53.45	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]

BLAST of CmaCh19G004190 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G38870.1	3.7e-07	39.34	Serine protease inhibitor, potato inhibitor I-type family protein	[more]

BLAST of CmaCh19G004190 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700205344\|gb\|KGN60477.1\|	7.0e-16	68.25	hypothetical protein Csa_3G914570 [Cucumis sativus]	[more]
gi\|700205345\|gb\|KGN60478.1\|	4.4e-10	52.38	hypothetical protein Csa_3G914580 [Cucumis sativus]	[more]
gi\|778698123\|ref\|XP_011654473.1\|	4.9e-09	50.82	PREDICTED: inhibitor of trypsin and hageman factor-like [Cucumis sativus]	[more]
gi\|697163113\|ref\|XP_009590374.1\|	2.7e-07	50.79	PREDICTED: trypsin inhibitor 1 [Nicotiana tomentosiformis]	[more]
gi\|460404371\|ref\|XP_004247656.1\|	4.6e-07	55.17	PREDICTED: wound-induced proteinase inhibitor 1 [Solanum lycopersicum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000864	Prot_inh_pot1

Vocabulary: **Molecular Function**
Term	Definition
GO:0004867	serine-type endopeptidase inhibitor activity

Vocabulary: **Biological Process**
Term	Definition
GO:0009611	response to wounding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010951	negative regulation of endopeptidase activity
biological_process	GO:0009611	response to wounding
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004867	serine-type endopeptidase inhibitor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G004190.1	CmaCh19G004190.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000864	Proteinase inhibitor I13, potato inhibitor I	PRODOM	PD002604		coord: 8..65 score: 5.0
IPR000864	Proteinase inhibitor I13, potato inhibitor I	PRINTS	PR00292	POTATOINHBTR	coord: 7..20 score: 3.8E-8coord: 44..54 score: 3.8E-8coord: 32..43 score: 3.
IPR000864	Proteinase inhibitor I13, potato inhibitor I	PFAM	PF00280	potato_inhibit	coord: 7..66 score: 1.2
IPR000864	Proteinase inhibitor I13, potato inhibitor I	unknown	SSF54654	CI-2 family of serine protease inhibitors	coord: 4..67 score: 9.68
None	No IPR available	GENE3D	G3DSA:3.30.10.10		coord: 6..67 score: 1.3
None	No IPR available	PANTHER	PTHR33091	FAMILY NOT NAMED	coord: 7..67 score: 2.2
None	No IPR available	PANTHER	PTHR33091:SF1	SUBFAMILY NOT NAMED	coord: 7..67 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh19G004190	ClCG09G013040	Watermelon (Charleston Gray)	cmawcgB440
CmaCh19G004190	CmoCh19G004250	Cucurbita moschata (Rifu)	cmacmoB508
CmaCh19G004190	Cla97C09G175800	Watermelon (97103) v2	cmawmbB549

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh19G004190	Cucumber (Gy14) v1	cgycmaB0868
CmaCh19G004190	Cucumber (Gy14) v1	cgycmaB0869
CmaCh19G004190	Cucurbita moschata (Rifu)	cmacmoB527
CmaCh19G004190	Wild cucumber (PI 183967)	cmacpiB518
CmaCh19G004190	Cucumber (Chinese Long) v2	cmacuB511
CmaCh19G004190	Cucumber (Chinese Long) v2	cmacuB517
CmaCh19G004190	Melon (DHL92) v3.5.1	cmameB469
CmaCh19G004190	Melon (DHL92) v3.5.1	cmameB473
CmaCh19G004190	Watermelon (97103) v1	cmawmB472
CmaCh19G004190	Cucurbita pepo (Zucchini)	cmacpeB522
CmaCh19G004190	Cucurbita pepo (Zucchini)	cmacpeB548
CmaCh19G004190	Bottle gourd (USVL1VR-Ls)	cmalsiB488
CmaCh19G004190	Cucumber (Gy14) v2	cgybcmaB377
CmaCh19G004190	Cucumber (Gy14) v2	cgybcmaB385
CmaCh19G004190	Melon (DHL92) v3.6.1	cmamedB544
CmaCh19G004190	Melon (DHL92) v3.6.1	cmamedB547
CmaCh19G004190	Silver-seed gourd	carcmaB0294
CmaCh19G004190	Silver-seed gourd	carcmaB0997
CmaCh19G004190	Cucumber (Chinese Long) v3	cmacucB0616
CmaCh19G004190	Cucumber (Chinese Long) v3	cmacucB0625
CmaCh19G004190	Wax gourd	cmawgoB0646
CmaCh19G004190	Cucurbita maxima (Rimu)	cmacmaB455