CmaCh19G003950 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAAGCTTCTCATAAACAAAGTGGATATGAAAGCAAAGAATTTGGAAGGCAAGACAGCACTAGACATAATGAAAGAACGTGGCCTTGTTGAAGACAAAGAGGTAAAAGAGATGCTCCATGGTTCCCACATTCTCAGAGATGTTGCAAAATTTGTGTGTTCAATATTATTGTTTGTGAAGAGATTAGTGATTACGGACCATCCTGAGATCCTTTACATGTCTAAAAAGGATCGGAATGCCATATTAGTAGTTTATGTGCTCATTGCCACTGCAACTTACGAAGCAGCTCTAAGTCCACCCGAAAAAGATATGGATTTCTTCCCTCCGGAGTGGATCTCATACGTATGCTTCCAACAGTTAAATACAGTTGCATTCGTTGCTTCAATGATAGAGATTTGTGTTCATCTTCCTTCTGGGATTGGCTACGCTCTCCATTTGGTTCTTCCTTTGGTCATTTGCTATGCATTATTGGCGATCGTTTGGAGGTCGTACTTTCCTTTAGTTATCACAAGTGCAGTCATTTTTTTGCTTATTTTGTCCAAAATTCCCTTGGTTAGACAGAAGGTGAAAGGAGGTTTTAAGCCAAAGAAGCCTAACAAACTTGGTGGTCGCTTCAGCTTCAGCATGGAGAAAGAATTGACAGACATAAGTGTGCACTTTGGTCGCAGTGGTTAG ATGGTGAAGCTTCTCATAAACAAAGTGGATATGAAAGCAAAGAATTTGGAAGGCAAGACAGCACTAGACATAATGAAAGAACGTGGCCTTGTTGAAGACAAAGAGGTAAAAGAGATGCTCCATGGTTCCCACATTCTCAGAGATGTTGCAAAATTTGTGTGTTCAATATTATTGTTTGTGAAGAGATTAGTGATTACGGACCATCCTGAGATCCTTTACATGTCTAAAAAGGATCGGAATGCCATATTAGTAGTTTATGTGCTCATTGCCACTGCAACTTACGAAGCAGCTCTAAGTCCACCCGAAAAAGATATGGATTTCTTCCCTCCGGAGTGGATCTCATACGTATGCTTCCAACAGTTAAATACAGTTGCATTCGTTGCTTCAATGATAGAGATTTGTGTTCATCTTCCTTCTGGGATTGGCTACGCTCTCCATTTGGTTCTTCCTTTGGTCATTTGCTATGCATTATTGGCGATCGTTTGGAGGTCGTACTTTCCTTTAGTTATCACAAGTGCAGTCATTTTTTTGCTTATTTTGTCCAAAATTCCCTTGGTTAGACAGAAGGTGAAAGGAGGTTTTAAGCCAAAGAAGCCTAACAAACTTGGTGGTCGCTTCAGCTTCAGCATGGAGAAAGAATTGACAGACATAAGTGTGCACTTTGGTCGCAGTGGTTAG ATGGTGAAGCTTCTCATAAACAAAGTGGATATGAAAGCAAAGAATTTGGAAGGCAAGACAGCACTAGACATAATGAAAGAACGTGGCCTTGTTGAAGACAAAGAGGTAAAAGAGATGCTCCATGGTTCCCACATTCTCAGAGATGTTGCAAAATTTGTGTGTTCAATATTATTGTTTGTGAAGAGATTAGTGATTACGGACCATCCTGAGATCCTTTACATGTCTAAAAAGGATCGGAATGCCATATTAGTAGTTTATGTGCTCATTGCCACTGCAACTTACGAAGCAGCTCTAAGTCCACCCGAAAAAGATATGGATTTCTTCCCTCCGGAGTGGATCTCATACGTATGCTTCCAACAGTTAAATACAGTTGCATTCGTTGCTTCAATGATAGAGATTTGTGTTCATCTTCCTTCTGGGATTGGCTACGCTCTCCATTTGGTTCTTCCTTTGGTCATTTGCTATGCATTATTGGCGATCGTTTGGAGGTCGTACTTTCCTTTAGTTATCACAAGTGCAGTCATTTTTTTGCTTATTTTGTCCAAAATTCCCTTGGTTAGACAGAAGGTGAAAGGAGGTTTTAAGCCAAAGAAGCCTAACAAACTTGGTGGTCGCTTCAGCTTCAGCATGGAGAAAGAATTGACAGACATAAGTGTGCACTTTGGTCGCAGTGGTTAG MVKLLINKVDMKAKNLEGKTALDIMKERGLVEDKEVKEMLHGSHILRDVAKFVCSILLFVKRLVITDHPEILYMSKKDRNAILVVYVLIATATYEAALSPPEKDMDFFPPEWISYVCFQQLNTVAFVASMIEICVHLPSGIGYALHLVLPLVICYALLAIVWRSYFPLVITSAVIFLLILSKIPLVRQKVKGGFKPKKPNKLGGRFSFSMEKELTDISVHFGRSG
BLAST of CmaCh19G003950 vs. TrEMBL
Match: W9S5L9_9ROSA (Ankyrin repeat-containing protein OS=Morus notabilis GN=L484_023405 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 9.3e-19 Identity = 83/221 (37.56%), Postives = 125/221 (56.56%), Query Frame = 1
BLAST of CmaCh19G003950 vs. TrEMBL
Match: W9S5J8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023404 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 4.6e-18 Identity = 81/209 (38.76%), Postives = 118/209 (56.46%), Query Frame = 1
BLAST of CmaCh19G003950 vs. TrEMBL
Match: W9SNY8_9ROSA (Phytosulfokine receptor 1 OS=Morus notabilis GN=L484_002271 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 4.8e-15 Identity = 70/194 (36.08%), Postives = 110/194 (56.70%), Query Frame = 1
BLAST of CmaCh19G003950 vs. TrEMBL
Match: A0A164V5K6_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_022796 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.5e-11 Identity = 61/181 (33.70%), Postives = 93/181 (51.38%), Query Frame = 1
BLAST of CmaCh19G003950 vs. TrEMBL
Match: M5WRS3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017217mg PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.1e-08 Identity = 61/192 (31.77%), Postives = 96/192 (50.00%), Query Frame = 1
BLAST of CmaCh19G003950 vs. TAIR10
Match: AT4G11000.1 (AT4G11000.1 Ankyrin repeat family protein) HSP 1 Score: 50.1 bits (118), Expect = 2.1e-06 Identity = 41/114 (35.96%), Postives = 60/114 (52.63%), Query Frame = 1
BLAST of CmaCh19G003950 vs. TAIR10
Match: AT5G54620.1 (AT5G54620.1 Ankyrin repeat family protein) HSP 1 Score: 48.9 bits (115), Expect = 4.7e-06 Identity = 53/201 (26.37%), Postives = 93/201 (46.27%), Query Frame = 1
BLAST of CmaCh19G003950 vs. NCBI nr
Match: gi|703153015|ref|XP_010110570.1| (Ankyrin repeat-containing protein [Morus notabilis]) HSP 1 Score: 102.1 bits (253), Expect = 1.3e-18 Identity = 83/221 (37.56%), Postives = 125/221 (56.56%), Query Frame = 1
BLAST of CmaCh19G003950 vs. NCBI nr
Match: gi|703153011|ref|XP_010110569.1| (hypothetical protein L484_023404 [Morus notabilis]) HSP 1 Score: 99.8 bits (247), Expect = 6.6e-18 Identity = 81/209 (38.76%), Postives = 118/209 (56.46%), Query Frame = 1
BLAST of CmaCh19G003950 vs. NCBI nr
Match: gi|703086159|ref|XP_010092930.1| (Phytosulfokine receptor 1 [Morus notabilis]) HSP 1 Score: 89.7 bits (221), Expect = 6.9e-15 Identity = 70/194 (36.08%), Postives = 110/194 (56.70%), Query Frame = 1
BLAST of CmaCh19G003950 vs. NCBI nr
Match: gi|1021032057|gb|KZM89841.1| (hypothetical protein DCAR_022796 [Daucus carota subsp. sativus]) HSP 1 Score: 77.4 bits (189), Expect = 3.5e-11 Identity = 61/181 (33.70%), Postives = 93/181 (51.38%), Query Frame = 1
BLAST of CmaCh19G003950 vs. NCBI nr
Match: gi|595858737|ref|XP_007210809.1| (hypothetical protein PRUPE_ppa017217mg [Prunus persica]) HSP 1 Score: 68.6 bits (166), Expect = 1.6e-08 Identity = 61/192 (31.77%), Postives = 96/192 (50.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |